Miyakogusa Predicted Gene
- Lj0g3v0235899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0235899.1 Non Characterized Hit- tr|D7TEQ6|D7TEQ6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.61,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; seg,NULL; PPR,Pentatricopeptide repea,CUFF.15444.1
(319 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 167 1e-41
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 156 2e-38
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 2e-38
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 5e-37
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 150 2e-36
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 150 2e-36
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 149 4e-36
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 149 5e-36
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 148 8e-36
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 147 1e-35
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 147 1e-35
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 147 2e-35
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 144 1e-34
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 143 2e-34
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 142 6e-34
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 140 2e-33
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 3e-33
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 139 3e-33
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 138 7e-33
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 137 1e-32
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 2e-32
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 137 2e-32
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 2e-32
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 137 2e-32
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 135 4e-32
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 135 6e-32
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 7e-32
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 133 2e-31
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 133 2e-31
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 133 3e-31
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 133 3e-31
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 132 3e-31
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 3e-31
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 132 4e-31
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 132 4e-31
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 132 4e-31
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 132 4e-31
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 132 5e-31
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 132 6e-31
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 129 3e-30
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 129 5e-30
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 128 7e-30
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 128 7e-30
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 128 7e-30
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 128 9e-30
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 127 1e-29
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 126 3e-29
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 126 3e-29
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 4e-29
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 5e-29
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 7e-29
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 124 1e-28
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 124 1e-28
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 124 1e-28
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 1e-28
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 124 1e-28
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 2e-28
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 123 2e-28
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 123 3e-28
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 123 3e-28
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 3e-28
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 122 3e-28
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 3e-28
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 122 3e-28
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 122 4e-28
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 5e-28
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 122 5e-28
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 122 5e-28
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 5e-28
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 122 6e-28
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 122 6e-28
Medtr4g113830.1 | organelle transcript processing protein, putat... 122 6e-28
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 8e-28
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 9e-28
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 121 9e-28
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 121 9e-28
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 121 9e-28
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 121 9e-28
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 121 1e-27
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 121 1e-27
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 120 1e-27
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 3e-27
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 119 4e-27
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 119 5e-27
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 118 6e-27
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 118 7e-27
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 118 8e-27
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 118 8e-27
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 118 9e-27
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 118 9e-27
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 117 1e-26
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 117 1e-26
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 2e-26
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 117 2e-26
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 117 2e-26
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 117 2e-26
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 117 2e-26
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 3e-26
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 3e-26
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 116 3e-26
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 115 5e-26
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 115 5e-26
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 6e-26
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 115 8e-26
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 8e-26
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 9e-26
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 114 1e-25
Medtr1g059720.1 | organelle transcript processing protein, putat... 114 1e-25
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 114 2e-25
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 114 2e-25
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 113 2e-25
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 2e-25
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 113 2e-25
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 2e-25
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 3e-25
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 113 3e-25
Medtr3g052720.1 | organelle transcript processing protein, putat... 113 3e-25
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 113 3e-25
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 112 3e-25
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 3e-25
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 112 3e-25
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 112 4e-25
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 4e-25
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 4e-25
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 4e-25
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 112 5e-25
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 112 5e-25
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 112 6e-25
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 111 7e-25
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 111 1e-24
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 111 1e-24
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 110 1e-24
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 110 2e-24
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 110 2e-24
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 109 3e-24
Medtr3g117150.1 | organelle transcript processing protein, putat... 109 3e-24
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 109 3e-24
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 3e-24
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 4e-24
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 108 5e-24
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 108 5e-24
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 108 6e-24
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 108 7e-24
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 108 7e-24
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 108 7e-24
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 108 8e-24
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 108 1e-23
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 107 1e-23
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 107 1e-23
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 107 2e-23
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 107 2e-23
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 106 3e-23
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 105 5e-23
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 6e-23
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 6e-23
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 105 6e-23
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 105 6e-23
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 7e-23
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 7e-23
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 105 7e-23
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 8e-23
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 9e-23
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 104 9e-23
Medtr5g006420.1 | organelle transcript processing protein, putat... 104 9e-23
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 104 1e-22
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 104 1e-22
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 103 2e-22
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 103 2e-22
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 3e-22
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 103 3e-22
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 4e-22
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 102 4e-22
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 102 5e-22
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 102 6e-22
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 102 6e-22
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 8e-22
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 101 8e-22
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 8e-22
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 101 9e-22
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 101 1e-21
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 2e-21
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 100 2e-21
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 100 3e-21
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 4e-21
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 99 5e-21
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 99 5e-21
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 6e-21
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 99 6e-21
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 9e-21
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 97 1e-20
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 97 2e-20
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 97 2e-20
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 3e-20
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 3e-20
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 96 3e-20
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 96 5e-20
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 96 6e-20
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 95 1e-19
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 94 2e-19
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 94 3e-19
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 93 3e-19
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 93 3e-19
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 4e-19
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 93 4e-19
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 92 5e-19
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 92 9e-19
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 91 1e-18
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 90 3e-18
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 90 3e-18
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 89 5e-18
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 89 6e-18
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 89 7e-18
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 8e-18
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 9e-18
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 88 1e-17
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 88 1e-17
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 1e-17
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 88 1e-17
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 88 1e-17
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 87 2e-17
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 86 5e-17
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 86 6e-17
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 85 1e-16
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 85 1e-16
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 85 1e-16
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 1e-16
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 84 1e-16
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 84 2e-16
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 84 2e-16
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 83 4e-16
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 82 5e-16
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 82 6e-16
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 82 7e-16
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 82 8e-16
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 82 8e-16
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 8e-16
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 8e-16
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 82 9e-16
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 82 1e-15
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 82 1e-15
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 82 1e-15
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 81 1e-15
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 81 1e-15
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 81 1e-15
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 80 2e-15
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 80 4e-15
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 5e-15
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 79 6e-15
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 78 9e-15
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 78 1e-14
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 78 1e-14
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 77 2e-14
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 2e-14
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 77 2e-14
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 2e-14
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 77 2e-14
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 77 3e-14
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 76 5e-14
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 75 6e-14
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 6e-14
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 8e-14
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 9e-14
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 75 1e-13
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 1e-13
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 74 1e-13
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 74 2e-13
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 73 3e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 73 3e-13
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 73 3e-13
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 73 3e-13
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 73 4e-13
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 73 4e-13
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 73 5e-13
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 72 5e-13
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 72 5e-13
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 5e-13
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 6e-13
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 6e-13
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 6e-13
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 72 6e-13
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 72 7e-13
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 7e-13
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 72 8e-13
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 72 9e-13
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 72 9e-13
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 72 9e-13
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-12
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 1e-12
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 71 1e-12
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 1e-12
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 71 1e-12
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-12
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 71 2e-12
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 71 2e-12
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 71 2e-12
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 70 4e-12
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 69 4e-12
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 4e-12
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 69 5e-12
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 5e-12
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 5e-12
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 6e-12
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 69 6e-12
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 6e-12
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 69 8e-12
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 9e-12
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 68 9e-12
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 68 9e-12
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 68 1e-11
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 68 1e-11
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 68 1e-11
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 68 1e-11
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 3e-11
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 67 3e-11
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-11
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 67 3e-11
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 67 3e-11
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 66 4e-11
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 66 4e-11
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 66 4e-11
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 4e-11
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 66 5e-11
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 5e-11
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 5e-11
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 66 5e-11
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 66 5e-11
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 66 5e-11
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 65 8e-11
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 65 8e-11
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-11
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 65 9e-11
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 65 9e-11
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 65 1e-10
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-10
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 65 1e-10
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 65 1e-10
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 64 1e-10
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 64 1e-10
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 64 1e-10
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 64 2e-10
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 64 2e-10
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 3e-10
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 64 3e-10
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 64 3e-10
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 63 3e-10
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 3e-10
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 4e-10
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 63 4e-10
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 63 5e-10
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 62 5e-10
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 62 6e-10
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 7e-10
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 7e-10
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 62 7e-10
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 62 8e-10
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 62 8e-10
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 62 8e-10
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 9e-10
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 62 1e-09
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 62 1e-09
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 62 1e-09
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 61 1e-09
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 61 1e-09
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 1e-09
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-09
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-09
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 61 2e-09
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-09
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 60 2e-09
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 60 2e-09
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 3e-09
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 60 3e-09
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 60 3e-09
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 59 5e-09
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 59 5e-09
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 59 6e-09
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 59 7e-09
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 59 7e-09
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 59 7e-09
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 59 7e-09
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 59 7e-09
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 59 7e-09
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 7e-09
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 59 7e-09
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 59 8e-09
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 8e-09
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 59 8e-09
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 8e-09
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 58 1e-08
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 58 1e-08
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 58 1e-08
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-08
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 57 2e-08
Medtr6g460480.1 | organelle transcript processing protein, putat... 57 2e-08
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 57 2e-08
Medtr8g091670.1 | PPR containing plant-like protein | HC | chr8:... 57 2e-08
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 57 2e-08
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 57 2e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 2e-08
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 172/320 (53%), Gaps = 13/320 (4%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPF-FTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LQ C SK+L KQ+H +L G++ ++KL+ +Y+ C DL+SA LF + +PN
Sbjct: 21 LQKCLKSKALKPGKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPN 80
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
VFAF ++ +G + + MR G+ + + F V+K C L + +
Sbjct: 81 VFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMDM-KKGKQVH 139
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN-GLS 184
D+ + N ++DMY KCG V+ A RVFD M ERDV SW SM+ C CN G
Sbjct: 140 GMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMI-CGFCNTGRI 198
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTL 240
+ A+ + E M+++G EP+ T N ++ Y R+G +A E+++ P+V++W L
Sbjct: 199 EEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNAL 258
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL-KI 299
ISG++ + + +FREM+ G+ P+ ++ +L +C +G++ G+E+HG+ K
Sbjct: 259 ISGFAQNHQFRETFTVFREMLVSGIC-PNQVTIAALLPACGSVGSVKWGREVHGFICRKG 317
Query: 300 MPGEIFYRSAGAALLTLYAR 319
+F S AL+ +Y++
Sbjct: 318 FDANVFIAS---ALIDMYSK 334
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTS 71
+ +A L M + G F +I YA D + A ++ + P+V A+ +
Sbjct: 198 IEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNA 257
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
+++ +++ R+ + EM G+ P+ +L AC + ++ +
Sbjct: 258 LISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSV-KWGREVHGFICRK 316
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
++ + ++++DMYSKCG ++ A VFD+++ ++V SWN+M+ C+ G+ A+E+
Sbjct: 317 GFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELF 376
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
M+ +G +P+ VT ++ A G V + ++F +K+
Sbjct: 377 TKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKE 416
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/338 (18%), Positives = 129/338 (38%), Gaps = 81/338 (23%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++ C + + KQ+H + G LI +Y C + A +F + + +
Sbjct: 122 VIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERD 181
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++TS++ G + + + M+ +G P+ + +
Sbjct: 182 VASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTW--------------------- 220
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCN 181
N+++ Y++ GD + A + M++ DV +WN+++S + N
Sbjct: 221 ---------------NAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQN 265
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
+ V M V G P+ VT
Sbjct: 266 HQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIA 325
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ ++D Y + G + +A VF++I+ NV SW +I + G +L +F +M +G+
Sbjct: 326 SALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQ 385
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHG-----YGLKI 299
P+ + +L +C G++ G EI YG++I
Sbjct: 386 -PNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEI 422
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 58/109 (53%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL AC + S+ +++H ++ G F + LI +Y+ C L+ A ++F ++
Sbjct: 292 ALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCK 351
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
NV ++ +++ + G+ +E + +M+ +G+ P+ F +L AC+
Sbjct: 352 NVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSH 400
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 173/363 (47%), Gaps = 53/363 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+SL+ AC + SL+ KQ+H ++ ++G + F TKL+Q+Y C L A LF +LP
Sbjct: 114 FSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELP 173
Query: 63 -QPNVFAFTSIL----AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+ +V+ + ++L F R ++TY++MR GV + Y F V+K+ A A
Sbjct: 174 DESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAF 233
Query: 118 LEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEM--RERDVFSWNSM 174
+ D LR C ++D+Y KCG V+ A RVF+E+ RERDV W +M
Sbjct: 234 YQGLKTHALLIKNGLVDSDILRTC--LIDLYFKCGKVKLARRVFEEIPERERDVVVWGTM 291
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM------------------------ 210
+S + N L + +E ++ M +G P+ V V+
Sbjct: 292 LSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKS 351
Query: 211 ------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
D YC+ G +S A VF + NV+ WT L+SGY+SVGR +L
Sbjct: 352 YAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVI 411
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTL 316
M +G PD ++ VL C L AL GK+IH Y LK +P S ++L+ +
Sbjct: 412 WMQQEGFR-PDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNV----SLSSSLVVM 466
Query: 317 YAR 319
Y++
Sbjct: 467 YSK 469
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 42/318 (13%)
Query: 20 KQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
+++H ++L S+ K + LI +Y C DL SA ++F P+ NV +T++++ ++
Sbjct: 340 QEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYAS 399
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
G Q + M+ +G PD VL CAQL AL E ++
Sbjct: 400 VGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRAL-EQGKQIHAYALKHWFLPNVS 458
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ +S++ MYSKCG VE + R+F +M +R+V SW +M+ Y+ NG A+ V+ SM++
Sbjct: 459 LSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSK 518
Query: 199 CEPDVVTRN-----------------------------------TVMDAYCRMGLVSEAS 223
PD V + +++ Y +G V +A+
Sbjct: 519 HRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDVDKAN 578
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
VF + ++WT LI Y + ++ +F +M +D P+ +L C
Sbjct: 579 LVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRSDRFS-PNPFTFEVILSVCERA 637
Query: 284 GALASGKEIHGYGLKIMP 301
G + +I +MP
Sbjct: 638 GFVNDASKI----FNLMP 651
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L C+ ++L Q KQ+H Y L H ++ L+ +Y+ C + + LF + Q
Sbjct: 427 TVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQR 486
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T+++ + +G + + M+ PD ++L C +L LL+
Sbjct: 487 NVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELK-LLKHGKEI 545
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
V +++MY GDV+ A VF + + +W +++ Y N L
Sbjct: 546 HGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYNELY 605
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
Q A+++ + MR D P+ T ++ R G V++ASK+F
Sbjct: 606 QGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKIF 647
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 172/321 (53%), Gaps = 12/321 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L++ + S+SL Q K+LH + +G R + LI +Y C L A LF ++PQ N
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF--PKVLKACAQLAALLEXXXX 123
+ + +++A +R G +E ++EM+ VF P VLKAC + +
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRI-YGEQ 153
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V ++++ MYSKCG+V A +VFD M +D+ + N+++S Y GL
Sbjct: 154 VHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGL 213
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAY---CRMGLVSEASKVFEQIK-DPNVISWTT 239
A+ ++E+M++ G P+VVT N ++ + C +VSE ++ + + +P+V+SWT+
Sbjct: 214 PNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTS 273
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++SG+ R+ + F++M+ G P + +S +L +C + GKEIHGY L I
Sbjct: 274 VLSGFVQNFRNEEAFDAFKKMLLLGFC-PTSATISALLPACATEARVRFGKEIHGYALVI 332
Query: 300 -MPGEIFYRSAGAALLTLYAR 319
+ +++ RS AL+ +YA+
Sbjct: 333 GVEDDLYVRS---ALVDMYAK 350
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 136/335 (40%), Gaps = 79/335 (23%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC +Q+H +L F ++ LI +Y+ C ++R A +F +
Sbjct: 137 SVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVK 196
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ A ++++ +++ GL + + M+ GV+P+ + ++ AQ
Sbjct: 197 DLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQ----------- 245
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVC 180
KC D E + +F M E DV SW S++S +V
Sbjct: 246 ------------------------KC-DREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQ 280
Query: 181 NGLSQRAVEVLESMR-----------------------------------VDGCEPDVVT 205
N ++ A + + M V G E D+
Sbjct: 281 NFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYV 340
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
R+ ++D Y + G +SEA +F ++ + N ++ ++I GY++ G ++ +F +M +G+
Sbjct: 341 RSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGV 400
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
D + L +C +G + G+ + KIM
Sbjct: 401 PKLDHLTFTAALTACSHVGDIELGQRL----FKIM 431
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 10/243 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++LL AC+ + K++H Y L+ G + + L+ +YA C + A +LF ++P
Sbjct: 306 ISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMP 365
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-DGYVFPKVLKACAQLAALLEXX 121
+ N S++ ++ HG + IE + +M +GV D F L AC+ + +
Sbjct: 366 EKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQ 425
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVC 180
L ++D++ + G +E A + M + D+F W ++++ C
Sbjct: 426 RLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLA--AC 483
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA-YCRMGLVSEASKVFEQIKDPNV----- 234
+ + + + EP+ ++ + Y G + ++ +IK +
Sbjct: 484 RNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQG 543
Query: 235 ISW 237
+SW
Sbjct: 544 LSW 546
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 34/321 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLH-GSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L+ C+ S NQAK+L +M L F +L+ +YA C + A LF ++ +
Sbjct: 36 LVLHCAQSNDFNQAKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKR 95
Query: 65 NVFAFTSILAFHSRHGLAR-------------------------------QCIETYAEMR 93
+++++ ++L+ +++ GL + + + M+
Sbjct: 96 DIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQ 155
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
G P Y + L+AC+QL ++ V N+V D+Y+KCGD+
Sbjct: 156 EDGFRPTQYSYVNALQACSQLLDF-RLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDI 214
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
+ A +FD M +++ SWN M+S YV G + M++ G +PD VT ++V++AY
Sbjct: 215 DRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAY 274
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
+ G V +A +F++I + I WTT+I GY+ GR +L +F EM+ G V PD+ +
Sbjct: 275 FQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLR-GNVRPDSHTI 333
Query: 274 SGVLVSCRCLGALASGKEIHG 294
S V+ SC L +L G+ +HG
Sbjct: 334 STVVSSCAKLASLYHGQAVHG 354
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 9/259 (3%)
Query: 26 MLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQC 85
M L G + ++ Y + A ++F ++ + + +T+++ +++ G
Sbjct: 255 MQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDA 314
Query: 86 IETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLD 145
+ ++EM V PD + V+ +CA+LA+L ++ V ++++D
Sbjct: 315 LMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDS-NMLVSSALVD 373
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
MY KCG A +F+ M ++V WNSM+ Y NG ++ A+ + E M + +PD ++
Sbjct: 374 MYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNIS 433
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMV 261
V+ A +V E K F+ I + P + + +I G +L + + M
Sbjct: 434 FVGVLSACINTNMVKEGRKHFDSISEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMP 493
Query: 262 NDGMVFPDAGALSGVLVSC 280
+ PD S +L C
Sbjct: 494 HK----PDCRIWSALLSVC 508
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++++ +C+ SL + +H ++L G ++ L+ +Y C A +F +P
Sbjct: 333 ISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMP 392
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
NV + S++ ++++G A + + Y M + PD F VL AC
Sbjct: 393 IKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSAC 441
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 161/302 (53%), Gaps = 10/302 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC +L + KQ+H Y++ F + L+++Y C +++SA ++F+++
Sbjct: 280 SVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK 339
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T++L + ++G + + ++T+++M+ G+ PD + V+ +CA LA+L E
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N+++ +Y KCG +E + R+F+E+ +D +W +++S Y G +
Sbjct: 400 ARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKA 458
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI-----SWTT 239
+ + ESM G +PD VT V+ A R GLV + +++FE + + + I +T
Sbjct: 459 NETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTC 518
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I +S GR + R +N PDA + + +L SCR G + GK + +++
Sbjct: 519 MIDLFSRAGR----IEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMEL 574
Query: 300 MP 301
P
Sbjct: 575 DP 576
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 68/356 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++LL S + +Q+H +++ G F + L+ +Y+ + A +F +LP
Sbjct: 146 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 205
Query: 63 QPNV-------------------------------FAFTSILAFHSRHGLARQCIETYAE 91
+ NV ++TS++ +++GL R I+ + E
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 265
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ + + D Y F VL AC + AL E ++ V +++++MY KC
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQE-GKQVHAYIIRTDYKDNIFVASALVEMYCKCK 324
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------- 202
+++ A VF +M ++V SW +M+ Y NG S+ AV+ M+ G EPD
Sbjct: 325 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Query: 203 --------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+ N ++ Y + G + ++ ++F +I + ++
Sbjct: 385 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 444
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
WT L+SGY+ G+ ++G+F M+ G+ PD GVL +C G + G +I
Sbjct: 445 WTALVSGYAQFGKANETIGLFESMLAHGLK-PDKVTFIGVLSACSRAGLVEKGNQI 499
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 165/426 (38%), Gaps = 121/426 (28%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC------------- 48
H +LL+ C + + +AK LH +++ + + F LI YA
Sbjct: 11 HYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQM 70
Query: 49 --------DDLRSAHS----------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
+ + SA+S LF +P+ + ++ S+++ ++ GL Q ++ Y
Sbjct: 71 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130
Query: 91 EMRFKGVSPDGYV------FPKVL-----KACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
M + DG + F +L + C +L + + V
Sbjct: 131 LM----LKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY------VFV 180
Query: 140 CNSVLDMYSK-------------------------------CGDVEGAARVFDEMRERDV 168
+ ++DMYSK CG VE + R+F EMRERD
Sbjct: 181 GSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS 240
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------- 212
SW SM++ + NGL + A+++ M+++ + D T +V+ A
Sbjct: 241 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY 300
Query: 213 -------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
YC+ + A VF+++ NV+SWT ++ GY G +
Sbjct: 301 IIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
+ F +M G + PD L V+ SC L +L G + H L G I + + AL
Sbjct: 361 VKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALT--SGLISFITVSNAL 417
Query: 314 LTLYAR 319
+TLY +
Sbjct: 418 VTLYGK 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S++ +C+ SL + Q H L G + L+ +Y C + +H LF ++
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +T++++ +++ G A + I + M G+ PD F VL AC++ A L+E
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR-AGLVEKGN 497
Query: 123 XXXXXXXXX---XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
D C ++D++S+ G +E A ++M D SW +++S
Sbjct: 498 QIFESMINEHGIVPIQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 161/302 (53%), Gaps = 10/302 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC +L + KQ+H Y++ F + L+++Y C +++SA ++F+++
Sbjct: 280 SVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCK 339
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T++L + ++G + + ++T+++M+ G+ PD + V+ +CA LA+L E
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N+++ +Y KCG +E + R+F+E+ +D +W +++S Y G +
Sbjct: 400 ARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKA 458
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI-----SWTT 239
+ + ESM G +PD VT V+ A R GLV + +++FE + + + I +T
Sbjct: 459 NETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTC 518
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I +S GR + R +N PDA + + +L SCR G + GK + +++
Sbjct: 519 MIDLFSRAGR----IEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMEL 574
Query: 300 MP 301
P
Sbjct: 575 DP 576
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 153/356 (42%), Gaps = 68/356 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++LL S + +Q+H +++ G F + L+ +Y+ + A +F +LP
Sbjct: 146 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 205
Query: 63 QPNV-------------------------------FAFTSILAFHSRHGLARQCIETYAE 91
+ NV ++TS++ +++GL R I+ + E
Sbjct: 206 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 265
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ + + D Y F VL AC + AL E ++ V +++++MY KC
Sbjct: 266 MKLENLQMDQYTFGSVLTACGGVMALQE-GKQVHAYIIRTDYKDNIFVASALVEMYCKCK 324
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------- 202
+++ A VF +M ++V SW +M+ Y NG S+ AV+ M+ G EPD
Sbjct: 325 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Query: 203 --------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+ N ++ Y + G + ++ ++F +I + ++
Sbjct: 385 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 444
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
WT L+SGY+ G+ ++G+F M+ G+ PD GVL +C G + G +I
Sbjct: 445 WTALVSGYAQFGKANETIGLFESMLAHGLK-PDKVTFIGVLSACSRAGLVEKGNQI 499
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 165/426 (38%), Gaps = 121/426 (28%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC------------- 48
H +LL+ C + + +AK LH +++ + + F LI YA
Sbjct: 11 HYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQM 70
Query: 49 --------DDLRSAHS----------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
+ + SA+S LF +P+ + ++ S+++ ++ GL Q ++ Y
Sbjct: 71 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130
Query: 91 EMRFKGVSPDGYV------FPKVL-----KACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
M + DG + F +L + C +L + + V
Sbjct: 131 LM----LKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY------VFV 180
Query: 140 CNSVLDMYSK-------------------------------CGDVEGAARVFDEMRERDV 168
+ ++DMYSK CG VE + R+F EMRERD
Sbjct: 181 GSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS 240
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------- 212
SW SM++ + NGL + A+++ M+++ + D T +V+ A
Sbjct: 241 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY 300
Query: 213 -------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
YC+ + A VF+++ NV+SWT ++ GY G +
Sbjct: 301 IIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
+ F +M G + PD L V+ SC L +L G + H L G I + + AL
Sbjct: 361 VKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALT--SGLISFITVSNAL 417
Query: 314 LTLYAR 319
+TLY +
Sbjct: 418 VTLYGK 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S++ +C+ SL + Q H L G + L+ +Y C + +H LF ++
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +T++++ +++ G A + I + M G+ PD F VL AC++ A L+E
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR-AGLVEKGN 497
Query: 123 XXXXXXXXX---XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
D C ++D++S+ G +E A ++M D SW +++S
Sbjct: 498 QIFESMINEHGIVPIQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 41/352 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SL+ C+ KSL K LH ++L GS FF KLI Y C + A LF ++P
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGS-LFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ + S+++ H G ++ IE Y+ M F+GV PD Y F + KA +++ E
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V ++DMY+K G ++ A VFD + ++DV + +++ Y +GL
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGL 183
Query: 184 SQRAVEVLESM---RVD--------------------------------GCEPDVVTRNT 208
A+EV E M R+ G E V ++ +
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTS 243
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y + +V ++ KVF + + ++WT+ I G GR V+L +FREM+ + P
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCS-ISP 302
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ LS +L +C L L +G++IH +K+ + G F AAL+ LY +
Sbjct: 303 NHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKF---VDAALIHLYGK 351
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L +C L K +H ++ +G T L+ +Y+ C+ + + +F L
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +TS + ++G + + EM +SP+ + +L AC+ LA +LE
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLA-MLEAGE 324
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V +++ +Y KCG+VE A VFD + E D+ S N+M+ Y NG
Sbjct: 325 QIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG 384
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
A+E+ E ++ G EP+VVT +++ A GLV E ++F I++ + I T
Sbjct: 385 FGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 37/292 (12%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
F T ++ +YA ++ A +F ++ +V FT+++ +++HGL + +E + +M
Sbjct: 138 FVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGS 197
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
+ P+ Y VL +C L L+ + S+L MYSKC VE
Sbjct: 198 RIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESV-VASQTSLLTMYSKCNMVED 256
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA--- 212
+ +VF+ + +W S + V NG + A+ + M P+ T ++++ A
Sbjct: 257 SIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSS 316
Query: 213 --------------------------------YCRMGLVSEASKVFEQIKDPNVISWTTL 240
Y + G V +A VF+ + + +++S T+
Sbjct: 317 LAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTM 376
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
I Y+ G +L +F + G+ P+ +L++C G + G +I
Sbjct: 377 IYAYAQNGFGHEALELFERLKKLGLE-PNVVTFISILLACNNAGLVEEGCQI 427
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 39/350 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQ C+ KSL K++H ++ +G KL+ +Y +C DL +F ++
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
VF + +++ +++ G R+ + + +M+ GV + Y F VLK A L + E
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V NS++ Y K G VE A +FDE+ E DV SWNSM++ V NG S
Sbjct: 219 GYVLKLGFGS-NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
+E+ M + G E D+ T NT+
Sbjct: 278 GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTL 337
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G ++ A++VF ++ D ++SWT++I+ Y G + ++G+F EM + G V PD
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG-VRPD 396
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ ++ +C C +L G+++H Y +K G AL+ +YA+
Sbjct: 397 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL--PVTNALINMYAK 444
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 40/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ +A + + K++H Y+L G LI Y + SAH+LF +L +P+
Sbjct: 201 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPD 260
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ S++ +G + +E + +M GV D VL ACA + L
Sbjct: 261 VVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNL-SLGRALH 319
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ N++LDMYSKCG++ GA VF +M + + SW S+++ YV GL
Sbjct: 320 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYS 379
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------------RNTVM 210
A+ + + M+ G PD+ T N ++
Sbjct: 380 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 439
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ Y + G V EA VF +I +++SW T+I GYS +L +F +M PD
Sbjct: 440 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM--QKQFKPDD 497
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ VL +C L AL G+EIHG+ L+ G AL+ +YA+
Sbjct: 498 ITMACVLPACAGLAALDKGREIHGHILR--RGYFSDLHVACALVDMYAK 544
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 150/322 (46%), Gaps = 38/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ +L+ + LH + + + F+ L+ +Y+ C +L A +F ++
Sbjct: 299 LVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++TSI+A + R GL I + EM+ KGV PD Y ++ ACA ++ L+
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA-CSSSLDKGR 417
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L V N++++MY+KCG VE A VF ++ +D+ SWN+M+ Y N
Sbjct: 418 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNL 477
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
L A+E+ M+ +PD +T V+
Sbjct: 478 LPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 536
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + GL+ A +F+ I ++ISWT +I+GY G ++ F EM G +
Sbjct: 537 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-IE 595
Query: 268 PDAGALSGVLVSCRCLGALASG 289
PD + S +L +C G L G
Sbjct: 596 PDESSFSAILNACSHSGLLNEG 617
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 2/229 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S++ AC+ S SL++ + +H Y++ +G T LI +YA C + A +F ++P
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++ +++ +S++ L + +E + +M+ K PD VL ACA LAAL +
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAAL-DKGR 517
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL V +++DMY+KCG + A +FD + ++D+ SW M++ Y +G
Sbjct: 518 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
A+ MR+ G EPD + + +++A GL++E K F +++
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRN 626
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC+ +L++ +++H ++L G L+ +YA C L A LF +P+ +
Sbjct: 503 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 562
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++T ++A + HG + I T+ EMR G+ PD F +L AC+ L E
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN 622
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMS-CYVCNG- 182
L V+D+ ++ G++ A + + M + D W ++S C + +
Sbjct: 623 SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDV 682
Query: 183 -LSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
L+++ E + + D VV N +A
Sbjct: 683 KLAEKVAEHIFELEPDNTRYYVVLANVYAEA 713
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 41/355 (11%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ ++S+L CS + L K++H +++ HG F ++ + YA C +R A ++F
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P +V + S+ + + G ++ + + EM GV PD +L AC+ L L+
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD-LKS 260
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ V N+++++Y C V A VFD M R+V +WNS+ SCYV
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------------------- 212
G Q+ + V M ++G +PD + ++++ A
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFV 380
Query: 213 -------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
Y V EA VF+ + NV++W +L S Y + G L +FREMV +G
Sbjct: 381 CTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG- 439
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
V PD + +L +C L L SGK IHG+ ++ M ++F + ALL+LYA+
Sbjct: 440 VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCN---ALLSLYAK 491
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 156/384 (40%), Gaps = 74/384 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS + L K +H + L HG F + L+ +Y C +R A ++F +P N
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + S+ + + G ++ + + EM GV PD +L AC+QL L+
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKD-LKSGKTIH 366
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ VC +++++Y+ C V A VFD M R+V +WNS+ SCYV G Q
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQ 426
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
+ + V M ++G +PD+VT N ++
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALL 486
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY-------------SSVGRHGV----- 252
Y + V EA VF+ I V SW +++ Y S + R V
Sbjct: 487 SLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEI 546
Query: 253 -----------------SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
++ IFR+M G PD + +L +C L GKEIH Y
Sbjct: 547 TWSVVIGGCVKNSRIEEAMEIFRKMQTMGFK-PDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
+ R+ AL+ +YA+
Sbjct: 606 VFRHWKDWDLART--NALVDMYAK 627
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 150/351 (42%), Gaps = 41/351 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++ +AC+AS+ + KQ H G I Y C + A +F L
Sbjct: 45 AVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVAR 104
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + S+ A + G +Q + + +M V + +L C+ L L +
Sbjct: 105 DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDL-KSGKEI 163
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V ++ ++ Y+KC V A VFD M RDV +WNS+ SCYV G
Sbjct: 164 HGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFP 223
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
Q+ + V M +DG +PD VT N +
Sbjct: 224 QKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNAL 283
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
++ Y V EA VF+ + NVI+W +L S Y + G L +FREM +G V PD
Sbjct: 284 VNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG-VKPD 342
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
A+S +L +C L L SGK IHG+ +K M ++F AL+ LYA
Sbjct: 343 PMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF---VCTALVNLYAN 390
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 128/280 (45%), Gaps = 41/280 (14%)
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
+F HGL + I+ Y R +G+ PD VF V KACA L+
Sbjct: 13 SFGIPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALK-VKQFHDDATRCGV 71
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D+ + N+ + Y KC VEGA RVFD++ RDV +WNS+ +CYV G Q+ + V
Sbjct: 72 MSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRK 131
Query: 194 MRVD--------------GCE---------------------PDVVTRNTVMDAYCRMGL 218
M ++ GC DV + ++ Y +
Sbjct: 132 MGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC 191
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
V EA VF+ + +V++W +L S Y + G L +FREMV DG V PD +S +L
Sbjct: 192 VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDG-VKPDPVTVSCILS 250
Query: 279 SCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLY 317
+C L L SGK IHG+ LK M +F + AL+ LY
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSN---ALVNLY 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 45/317 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L ACS + L K +H + + HG F L+ +YA C +R A +F +P
Sbjct: 449 SILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR 508
Query: 65 NVFAFTSILAFH-----------------------------------SRHGLARQCIETY 89
V ++ IL + ++ + +E +
Sbjct: 509 EVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIF 568
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
+M+ G PD +L+AC+ L+ L DL N+++DMY+K
Sbjct: 569 RKMQTMGFKPDETTIYSILRACS-LSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAK 627
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
CG + + VFD M +DVFSWN+M+ +G + A+ + E M + +PD T V
Sbjct: 628 CGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCV 687
Query: 210 MDAYCRMGLVSEASKVF-----EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ A LV E ++F + + +P +T ++ YS G + G + M +
Sbjct: 688 LSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME- 746
Query: 265 MVFPDAGALSGVLVSCR 281
P A A L CR
Sbjct: 747 ---PTAIAWKAFLAGCR 760
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 8/231 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+ACS S+ L K++H Y+ H T L+ +YA C L + ++F +P
Sbjct: 585 SILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK 644
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+VF++ +++ + HG ++ + + +M V PD F VL AC+ + E
Sbjct: 645 DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIF 704
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMS-CYVCNG 182
+ V+D+YS+ G +E A M E +W + ++ C V
Sbjct: 705 NSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKN 764
Query: 183 LSQRAVEVLESMRVD--GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ + + +D G V N ++ A L SEASK+ + +K+
Sbjct: 765 VELAKISAKKLFEIDPNGSANYVTLFNILVTA----KLWSEASKIRKLMKE 811
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 160/302 (52%), Gaps = 10/302 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC +L + KQ+H Y++ F + L+ +Y C +++SA ++F+++
Sbjct: 289 SVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK 348
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T++L + ++G + + ++T+++M+ G+ PD + V+ +CA LA+L E
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N+++ +Y KCG +E + R+F+E+ +D +W +++S Y G +
Sbjct: 409 ARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKA 467
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI-----SWTT 239
+ + ESM G +PD VT V+ A R GLV + +++FE + + + I +T
Sbjct: 468 NETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTC 527
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I +S GR + R +N PDA + + +L SCR G + GK + +++
Sbjct: 528 MIDLFSRAGR----IEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMEL 583
Query: 300 MP 301
P
Sbjct: 584 DP 585
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 68/356 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++LL S + +Q+H +++ G F + L+ +Y+ + A +F +LP
Sbjct: 155 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 214
Query: 63 QPNV-------------------------------FAFTSILAFHSRHGLARQCIETYAE 91
+ NV ++TS++ +++GL R I+ + E
Sbjct: 215 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 274
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ + + D Y F VL AC + AL E ++ V ++++ MY KC
Sbjct: 275 MKLENLQMDQYTFGSVLTACGCVMALQE-GKQVHAYIIRTDYKDNIFVASALVVMYCKCK 333
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------- 202
+++ A VF +M ++V SW +M+ Y NG S+ AV+ M+ G EPD
Sbjct: 334 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Query: 203 --------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+ N ++ Y + G + ++ ++F +I + ++
Sbjct: 394 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 453
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
WT L+SGY+ G+ ++G+F M+ G+ PD GVL +C G + G +I
Sbjct: 454 WTALVSGYAQFGKANETIGLFESMLAHGLK-PDKVTFIGVLSACSRAGLVEKGNQI 508
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 165/426 (38%), Gaps = 121/426 (28%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--------------- 46
H +LL+ C +++ +AK LH +++ + + F LI YA
Sbjct: 20 HYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQM 79
Query: 47 ------DCDDLRSAHS----------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
+ + SA+S LF +P+ + ++ S+++ ++ GL Q ++ Y
Sbjct: 80 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 139
Query: 91 EMRFKGVSPDG------YVFPKVL-----KACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
M + DG F +L + C +L + + V
Sbjct: 140 LM----LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY------VFV 189
Query: 140 CNSVLDMYSK-------------------------------CGDVEGAARVFDEMRERDV 168
+ ++DMYSK CG VE + R+F EMRERD
Sbjct: 190 GSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS 249
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------- 212
SW SM++ + NGL + A+++ M+++ + D T +V+ A
Sbjct: 250 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAY 309
Query: 213 -------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
YC+ + A VF+++ NV+SWT ++ GY G +
Sbjct: 310 IIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 369
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
+ F +M G + PD L V+ SC L +L G + H L G I + + AL
Sbjct: 370 VKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALT--SGLISFITVSNAL 426
Query: 314 LTLYAR 319
+TLY +
Sbjct: 427 VTLYGK 432
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S++ +C+ SL + Q H L G + L+ +Y C + +H LF ++
Sbjct: 388 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 447
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +T++++ +++ G A + I + M G+ PD F VL AC++ A L+E
Sbjct: 448 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR-AGLVEKGN 506
Query: 123 XXXXXXXXX---XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
D C ++D++S+ G +E A ++M D SW +++S
Sbjct: 507 QIFESMINEHGIVPIQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 562
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 160/302 (52%), Gaps = 10/302 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC +L + KQ+H Y++ F + L+ +Y C +++SA ++F+++
Sbjct: 289 SVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCK 348
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T++L + ++G + + ++T+++M+ G+ PD + V+ +CA LA+L E
Sbjct: 349 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 408
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N+++ +Y KCG +E + R+F+E+ +D +W +++S Y G +
Sbjct: 409 ARALTSGLISF-ITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKA 467
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI-----SWTT 239
+ + ESM G +PD VT V+ A R GLV + +++FE + + + I +T
Sbjct: 468 NETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTC 527
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I +S GR + R +N PDA + + +L SCR G + GK + +++
Sbjct: 528 MIDLFSRAGR----IEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMEL 583
Query: 300 MP 301
P
Sbjct: 584 DP 585
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 68/356 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++LL S + +Q+H +++ G F + L+ +Y+ + A +F +LP
Sbjct: 155 FSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELP 214
Query: 63 QPNV-------------------------------FAFTSILAFHSRHGLARQCIETYAE 91
+ NV ++TS++ +++GL R I+ + E
Sbjct: 215 EKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFRE 274
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ + + D Y F VL AC + AL E ++ V ++++ MY KC
Sbjct: 275 MKLENLQMDQYTFGSVLTACGCVMALQE-GKQVHAYIIRTDYKDNIFVASALVVMYCKCK 333
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------- 202
+++ A VF +M ++V SW +M+ Y NG S+ AV+ M+ G EPD
Sbjct: 334 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Query: 203 --------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+ N ++ Y + G + ++ ++F +I + ++
Sbjct: 394 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 453
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
WT L+SGY+ G+ ++G+F M+ G+ PD GVL +C G + G +I
Sbjct: 454 WTALVSGYAQFGKANETIGLFESMLAHGLK-PDKVTFIGVLSACSRAGLVEKGNQI 508
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 165/426 (38%), Gaps = 121/426 (28%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--------------- 46
H +LL+ C +++ +AK LH +++ + + F LI YA
Sbjct: 20 HYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQM 79
Query: 47 ------DCDDLRSAHS----------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
+ + SA+S LF +P+ + ++ S+++ ++ GL Q ++ Y
Sbjct: 80 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 139
Query: 91 EMRFKGVSPDG------YVFPKVL-----KACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
M + DG F +L + C +L + + V
Sbjct: 140 LM----LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY------VFV 189
Query: 140 CNSVLDMYSK-------------------------------CGDVEGAARVFDEMRERDV 168
+ ++DMYSK CG VE + R+F EMRERD
Sbjct: 190 GSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS 249
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------- 212
SW SM++ + NGL + A+++ M+++ + D T +V+ A
Sbjct: 250 ISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAY 309
Query: 213 -------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
YC+ + A VF+++ NV+SWT ++ GY G +
Sbjct: 310 IIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 369
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
+ F +M G + PD L V+ SC L +L G + H L G I + + AL
Sbjct: 370 VKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALT--SGLISFITVSNAL 426
Query: 314 LTLYAR 319
+TLY +
Sbjct: 427 VTLYGK 432
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S++ +C+ SL + Q H L G + L+ +Y C + +H LF ++
Sbjct: 388 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 447
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +T++++ +++ G A + I + M G+ PD F VL AC++ A L+E
Sbjct: 448 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR-AGLVEKGN 506
Query: 123 XXXXXXXXX---XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
D C ++D++S+ G +E A ++M D SW +++S
Sbjct: 507 QIFESMINEHGIVPIQDHYTC--MIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 562
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 166/350 (47%), Gaps = 39/350 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQ C+ KSL K++H ++ +G KL+ +Y +C DL +F ++
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
VF + +++ +++ G R+ + + +M+ GV + Y F VLK A L + E
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V NS++ Y K G VE A +FDE+ E DV SWNSM++ V NG S
Sbjct: 494 GYVLKLGFGS-NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 552
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
+E+ M + G E D+ T NT+
Sbjct: 553 GNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTL 612
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G ++ A++VF ++ D ++SWT+ I+ Y G + ++G+F EM + G V PD
Sbjct: 613 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG-VRPD 671
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ ++ +C C +L G+++H Y +K G AL+ +YA+
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL--PVTNALINMYAK 719
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 40/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ +A + + K++H Y+L G LI Y + SAH+LF +L +P+
Sbjct: 476 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPD 535
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ S++ +G + +E + +M GV D VL A A + L
Sbjct: 536 VVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNL-SLGRALH 594
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ N++LDMYSKCG++ GA VF +M + + SW S ++ YV GL
Sbjct: 595 GFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYS 654
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------------RNTVM 210
A+ + + M+ G PD+ T N ++
Sbjct: 655 DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI 714
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ Y + G V EA VF +I +++SW T+I GYS +L +F +M PD
Sbjct: 715 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM--QKQFKPDD 772
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ VL +C L AL G+EIHG+ L+ G AL+ +YA+
Sbjct: 773 ITMACVLPACAGLAALDKGREIHGHILR--RGYFSDLHVACALVDMYAK 819
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A + +L+ + LH + + + F+ L+ +Y+ C +L A +F ++
Sbjct: 574 LVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 633
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++TS +A + R GL I + EM+ KGV PD Y ++ ACA ++ L+
Sbjct: 634 DTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA-CSSSLDKGR 692
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L V N++++MY+KCG VE A VF ++ +D+ SWN+M+ Y N
Sbjct: 693 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNS 752
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
L A+E+ M+ +PD +T V+
Sbjct: 753 LPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 811
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + GL+ A +F+ I ++ISWT +I+GY G ++ F EM G +
Sbjct: 812 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-IE 870
Query: 268 PDAGALSGVLVSCRCLGALASG 289
PD + S +L +C G L G
Sbjct: 871 PDESSFSVILNACSHSGLLNEG 892
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 148/309 (47%), Gaps = 11/309 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S++ AC+ S SL++ + +H Y++ +G T LI +YA C + A +F ++P
Sbjct: 675 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++ +++ +S++ L + +E + +M+ K PD VL ACA LAAL +
Sbjct: 735 VKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAAL-DKGR 792
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL V +++DMY+KCG + A +FD + ++D+ SW M++ Y +G
Sbjct: 793 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 852
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
A+ MR+ G EPD + + +++A GL++E K F ++ +P + +
Sbjct: 853 FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ + +G + M + PD +L CR + +++ +
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMP----IKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF 968
Query: 298 KIMPGEIFY 306
++ P Y
Sbjct: 969 ELEPDNTRY 977
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC+ +L++ +++H ++L G L+ +YA C L A LF +P+ +
Sbjct: 778 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 837
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++T ++A + HG + I T+ EMR G+ PD F +L AC+ L E
Sbjct: 838 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN 897
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMS-CYVCNG- 182
L V+D+ ++ G++ A + + M + D W ++S C + +
Sbjct: 898 SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDV 957
Query: 183 -LSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
L+++ E + + D VV N +A
Sbjct: 958 KLAEKVAEHIFELEPDNTRYYVVLANVYAEA 988
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 151/325 (46%), Gaps = 38/325 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLLQ+C SK+LN KQLH G TKL+ +YA + L +A +LF ++P+
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+F + ++ ++ +G I Y +M G+ PD + P VLKAC+ L+A+ E
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGE-GRSI 170
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL V +++DMY+KCG V A RVFD++ RD WNSM++ Y NG
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTV----------------------------------- 209
++ + M +G P T TV
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G V A +FE++++ V+SW +I+GY+ G +L +F +M + PD
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR--PD 348
Query: 270 AGALSGVLVSCRCLGALASGKEIHG 294
GVL +C L G+ ++
Sbjct: 349 HITFVGVLAACSRGRLLDEGRALYN 373
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 11/284 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACSA ++ + + +H Y++ G R F LI +YA C + A +F ++ +
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD 213
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ S+LA ++++G + I EM GV P V+ + A +A L
Sbjct: 214 AVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHG 273
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D +V +++DMY+KCG V+ A +F+ +RE+ V SWN++++ Y +GL+
Sbjct: 274 FGWRHGFQSND-KVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE-QIKD----PNVISWTTL 240
A+++ + MR + PD +T V+ A R L+ E ++ ++D P V +T +
Sbjct: 333 GALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCM 391
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
I G+ + + R M V PD+G +L SC+ G
Sbjct: 392 IDLLGHCGQLDEAYDLIRNM----SVKPDSGVWGALLNSCKIHG 431
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ ++ +Y+ + A +FD++ ++++F WN ++ Y NG A+ + M G
Sbjct: 84 LATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYG 143
Query: 199 CEPDVVTRNTVM-----------------------------------DAYCRMGLVSEAS 223
PD T V+ D Y + G V +A
Sbjct: 144 LRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAG 203
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
+VF++I + + W ++++ Y+ G S+ + REM +G V P L V+ S +
Sbjct: 204 RVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANG-VRPTEATLVTVISSSADV 262
Query: 284 GALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L G+EIHG+G + G AL+ +YA+
Sbjct: 263 ACLPYGREIHGFGWR--HGFQSNDKVKTALIDMYAK 296
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 39/326 (11%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
HL + + N KQ+H ++ H+ P+ KLI Y+ ++L SA ++F Q+
Sbjct: 21 HLEENITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQV 80
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYA---EMRFKGVSPDGYVFPKVLKACAQLAALL 118
P PNV + ++ +S G + + +M GV D + +P +LK C ++ L
Sbjct: 81 PDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWL 140
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V NS++D Y +CGDVE A +VF M ERDV SWNSM+
Sbjct: 141 SLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGL 200
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW- 237
V NG A++V + M E D V+ NT++D + + G + +A K+FE++ + +++SW
Sbjct: 201 VKNGDLDGALKVFDEMP----ERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWS 256
Query: 238 ------------------------------TTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
TT+ISGY+ G+ ++ + EM G+
Sbjct: 257 TMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRL 316
Query: 268 PDAGALSGVLVSCRCLGALASGKEIH 293
D G +L +C G L GK++H
Sbjct: 317 DD-GFFISILAACAESGMLGLGKKMH 341
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 15/306 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L + + +++A +L M + R + ++ Y+ D+ A LF + P
Sbjct: 225 NTMLDGFTKAGEMDKAFKLFERM----AERDIVSWSTMVCGYSKNGDMDMARMLFDRCPV 280
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+ +T+I++ ++ G ++ + EM G+ D F +L ACA+ + +L
Sbjct: 281 KNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAE-SGMLGLGKK 339
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNG 182
+V NS +DMY+KCG V+ A RVF+ M+ E+D+ SWNSM+ + +G
Sbjct: 340 MHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHG 399
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
++++E+ +M +G +PD T ++ A GLV+E F ++ P + +
Sbjct: 400 HGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHY 459
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ G + + R M + P+A L +L +CR + + Y
Sbjct: 460 GCMVDLLGRGGHLKEAFWLVRSMPFE----PNAIILGTLLGACRMHNDVKLATSVSKYLF 515
Query: 298 KIMPGE 303
K++P +
Sbjct: 516 KLVPSD 521
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 39/351 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SL+ + KSL K LH ++L GS FF KLI Y C + A LF ++P
Sbjct: 5 TSLIAQFTNKKSLTTLKSLHTHILKSGS-LFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ + S+++ H G ++ IE Y M F+GV PD Y F + KA +++ E
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V ++DMY+K G ++ A VFD + ++DV + +++ Y GL
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGL 183
Query: 184 SQRAVEVLESM---RV--------------------------------DGCEPDVVTRNT 208
A+EV E M R+ G E V ++ +
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTS 243
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y + +V ++ KVF + + ++WT+ I G GR ++L +FREM+ + P
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS-ISP 302
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ S +L +C L L +G++IH +K+ G + AAL+ LY +
Sbjct: 303 NHFTFSSILHACSSLAMLEAGEQIHAVTVKL--GVDGNKYVDAALIHLYGK 351
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L +C L K +H ++ G T L+ +Y+ C+ + + +F L
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +TS + ++G + + EM +SP+ + F +L AC+ LA +LE
Sbjct: 266 YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLA-MLEAGE 324
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V +++ +Y KCG+VE A VF+ + E DV S N+M+ Y NG
Sbjct: 325 QIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNG 384
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
A+E+ E M+ G +P+VVT +++ A GLV E ++F I++ + I T
Sbjct: 385 FGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELT 440
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 159/299 (53%), Gaps = 7/299 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LLQ+C + K+LH + L + PF TKL+ +YA C L A +F ++
Sbjct: 88 NLLQSCIDKDCIFIGKELHSRIGL-VENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVR 146
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+F +++++ SR+ + + + M GV PD ++ PKVL+AC + L E
Sbjct: 147 NLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDL-ETGRLI 205
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ NS++ +Y+KCG+++ A ++FD M ERD +WN+M+S + NG
Sbjct: 206 HSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEI 265
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTL 240
+A + ++M+ DG EP +VT N ++ Y ++G A + +++ P+V +WT++
Sbjct: 266 GQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSM 325
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
ISG++ GR +L + +EM G V + ++ +C L +L+ G EIH +K+
Sbjct: 326 ISGFTQKGRISHALDLLKEMFLAG-VEANNITIASAASACAALKSLSMGLEIHSIAVKM 383
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ + + QA++ M G LI Y A L R++
Sbjct: 253 NAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEW 312
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P+V+ +TS+++ ++ G ++ EM GV + ACA L +L
Sbjct: 313 FGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSL-S 371
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
++ V NS++DMY KCGD++ A +FD M ERDV+SWNS++ Y
Sbjct: 372 MGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYF 431
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-----NV 234
G +A E+ M+ P+++T N ++ Y + G +A +F+ I+ N
Sbjct: 432 QAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNA 491
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
SW +LISG+ G+ +L IFR M + P++ + +L C L A KEIH
Sbjct: 492 ASWNSLISGFVQSGQKDKALQIFRNM-QFCHILPNSVTILSILPVCANLVASKKVKEIHC 550
Query: 295 YGL-KIMPGEIFYRSAGAALLTLYAR 319
+ + +I+ E+ S L+ YA+
Sbjct: 551 FAVRRILVSEL---SVSNLLIDSYAK 573
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 25 YMLLHGSHRKPFFTTKLIQI--YADCDDLRSAHSLFRQLPQP-----NVFAFTSILAFHS 77
+M + S P T I I Y A LF+ + + N ++ S+++
Sbjct: 443 FMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFV 502
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
+ G + ++ + M+F + P+ +L CA L A + +L
Sbjct: 503 QSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVAS-KKVKEIHCFAVRRILVSEL 561
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
V N ++D Y+K G++ + +F+E+ +D SWNSM+S YV +G S+ A+++ MR
Sbjct: 562 SVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQ 621
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS----VGRHGVS 253
G +P+ T +++ AY G+V E VF I ++ + YS+ +GR G
Sbjct: 622 GLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVR--QGMEHYSAMVYLLGRSG-K 678
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCR 281
L + + + P++ +L +CR
Sbjct: 679 LAEALDFIQSMPIEPNSSVWGALLTACR 706
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 114/297 (38%), Gaps = 75/297 (25%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +LQAC + L + +H ++ G ++ +YA C ++ A +F +
Sbjct: 186 LPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMD 245
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + A+ ++++ ++G Q + + M+ GV P
Sbjct: 246 ERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEP----------------------- 282
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCY 178
L N ++ Y++ G + A + +M DV++W SM+S +
Sbjct: 283 -------------SLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGF 329
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVT--------------------------------- 205
G A+++L+ M + G E + +T
Sbjct: 330 TQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNV 389
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
N+++D YC+ G + A +F+ + + +V SW ++I GY G G + +F +M
Sbjct: 390 LVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKM 446
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT-------------------------- 205
+S ++ NG AV +L+S+ GC +T
Sbjct: 52 DSQLNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGL 111
Query: 206 --------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
++ Y + GL+ A KVF ++ N+ +W+ +I G S G +G+F
Sbjct: 112 VENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLF 171
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
M+ DG V PD L VL +C L +G+ IH + I G + + +++ +Y
Sbjct: 172 YAMMRDG-VLPDEFLLPKVLQACGKCRDLETGRLIH--SMVIRRGMRWSKHLRNSIMAVY 228
Query: 318 AR 319
A+
Sbjct: 229 AK 230
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++ AC K +N ++ H +L G + + L+ +Y C A +F + +P
Sbjct: 143 TVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEP 202
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL------- 117
N FT+++ S+ ++ +E + M KG+ D +L CA+ +
Sbjct: 203 NEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSR 262
Query: 118 ----LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
DL +CNS+LDMY+K GD++ A VF+ + + V SWN
Sbjct: 263 GLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNI 322
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
M+S Y S++A+E + M+ G EPD VT ++ A + G V ++F+ + P+
Sbjct: 323 MISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPS 382
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ISW ++SGY+ HG ++ +FR+M PD L+ +L SC LG L +GK++H
Sbjct: 383 LISWNAILSGYNQSADHGEAVELFRKMQFQWQN-PDRTTLAIILSSCAELGLLEAGKQVH 441
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
K+ + Y ++L+ +Y++
Sbjct: 442 AVSQKLGFYDDVY--VASSLINVYSK 465
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 12/282 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L +C+ L KQ+H G + + + LI +Y+ C + + +F +L + +
Sbjct: 424 ILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELD 483
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + S++A S + L + + + MR G P + F + +CA+L++L +
Sbjct: 484 VVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHA 543
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V +S+++MY KCGDV A FD M +++ +WN M+ Y NG
Sbjct: 544 QIIKDGYVD-NVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGL 602
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTL 240
AV + + M G +PD +T V+ A LV E ++F + P + +T +
Sbjct: 603 EAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCI 662
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL-SGVLVSCR 281
I VGR E++ D M + D + VL SCR
Sbjct: 663 IDCLGRVGRFNEV-----EVILDTMPYKDDTIVWEVVLSSCR 699
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 151/376 (40%), Gaps = 91/376 (24%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
++L +LLQ+C +KSL+ AK +H + F LI +Y+ C+ + SAH +F +
Sbjct: 6 LNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDK 65
Query: 61 LPQPNVFAFTSIL-AF------------------------------HSRHGLARQCIETY 89
+P N+F++ +IL AF ++G RQ ++TY
Sbjct: 66 IPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTY 125
Query: 90 AEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
M ++ V P F V AC L + ++ V N++L MY+
Sbjct: 126 DLMMVYESVKPSHITFATVFSACGGLKDV-NCGRRNHGLVLKVGFDSNIYVSNALLCMYT 184
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ--RAVEVLESMR--------VD- 197
KCG E A RVF+ + E + ++ +MM GLSQ + E LE R VD
Sbjct: 185 KCGLNEDAFRVFEGIVEPNEVTFTTMMG-----GLSQTNQVKEGLELFRLMLRKGICVDS 239
Query: 198 -----------------------------------------GCEPDVVTRNTVMDAYCRM 216
G E D+ N+++D Y +
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
G + A VFE + +V+SW +ISGY + +L F+ M G PD +
Sbjct: 300 GDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYE-PDDVTYINM 358
Query: 277 LVSCRCLGALASGKEI 292
L +C G + G++I
Sbjct: 359 LTACVKSGDVKVGRQI 374
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 139/348 (39%), Gaps = 77/348 (22%)
Query: 10 CSASKSLN---QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
C S+ L+ Q KQ+H + HG R L+ +YA D+ SA ++F L + +V
Sbjct: 258 CDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSV 317
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ +++ + + + +E + M+ G PD + +L AC
Sbjct: 318 VSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACV-------------- 363
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
K GDV+ ++FD M + SWN+++S Y +
Sbjct: 364 ----------------------KSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGE 401
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS-------------------------- 220
AVE+ M+ PD T ++ + +GL+
Sbjct: 402 AVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLIN 461
Query: 221 --------EASK-VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
E SK VF ++ + +V+ W ++I+G+S +L F+ M G FP
Sbjct: 462 VYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGF-FPSEF 520
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + + SC L +L G++IH +K G + G++L+ +Y +
Sbjct: 521 SFATIASSCAKLSSLFQGQQIHAQIIK--DGYVDNVFVGSSLVEMYCK 566
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 8/234 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++ +C+ SL Q +Q+H ++ G F + L+++Y C D+ +A F +P
Sbjct: 524 TIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK 583
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ + ++ ++ +G + + Y +M G PD F VL AC+ A + E
Sbjct: 584 NIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIF 643
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYVCNG 182
L ++D + G + D M + D W ++ SC V
Sbjct: 644 SSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHAN 703
Query: 183 --LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
L++RA E L + P V+ N Y MG +A V + + D +
Sbjct: 704 VSLAKRAAEELHRLNPRNSAPYVLLANM----YSSMGRWDDAQVVRDLMSDNQI 753
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 147/346 (42%), Gaps = 66/346 (19%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
SL Q K +H ++LHG + KL+ DLR AH LF Q+PQPN F F ++
Sbjct: 48 SLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIK 107
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
+S + + Y M G+ P+ + P VLKACA +
Sbjct: 108 GYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAA-KSCYWLGVCVHAQSFKLGMG 166
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
V N++L++Y CG + A RVFD++ ER + SWNSM++ Y G S+ AV + M
Sbjct: 167 SHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREM 226
Query: 195 RVDGCEPDVVT-----------------------------------RNTVMDAYCRMGLV 219
+ G EPDV T N +MD Y + G +
Sbjct: 227 QEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNL 286
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM---------------VNDG 264
A VF+Q+ D +V+SWT +I+ Y++ G +L F +M V +G
Sbjct: 287 KCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEG 346
Query: 265 M---------------VFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ V + L +L SC +G LA GK+ H Y
Sbjct: 347 LYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSY 392
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 138/326 (42%), Gaps = 41/326 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF---- 58
L LL + + + + +H +M++ G T L+ +YA C +L+ A S+F
Sbjct: 238 LVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQML 297
Query: 59 ---------------------------RQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
Q+P NV ++ SI+ H + GL + ++ +
Sbjct: 298 DKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYR 357
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M GV + +L +C+ + L +CN+++DMY+KCG
Sbjct: 358 MCDSGVMANDTTLVAILSSCSHMGDL-ALGKQAHSYIFDNNITLSATLCNAIIDMYAKCG 416
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
++ A VF M E++ SWN ++ +G + A+E+ E M+ G PD +T ++
Sbjct: 417 ALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLS 476
Query: 212 AYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
A GLV FE + P+V + ++ G G ++ + ++M V
Sbjct: 477 ACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMP----V 532
Query: 267 FPDAGALSGVLVSCRCLGALASGKEI 292
PD S +L +CR G LA GK+I
Sbjct: 533 KPDVVVWSALLGACRTYGNLAIGKQI 558
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 42/355 (11%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
H SLL+ SAS SL++ K+LH ++ +G ++KL YA C A LF +L
Sbjct: 14 HFESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKL 73
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEX 120
P+ N+F++ +++ + + G + + EM G + PD + +P V+KAC++L ++
Sbjct: 74 PKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSEL-LFVDM 132
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V NS+L MY G+ E A VF+ M+ER V SWN++++
Sbjct: 133 GVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFR 192
Query: 181 NGLSQRAVEVLESMRVDGCEPD-----------------------------------VVT 205
N ++ A+ V M +G D VV
Sbjct: 193 NNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVV 252
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
RN ++D Y + G + EA + +++ +V++WTTLI+GY G +L + R M +G
Sbjct: 253 RNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEG- 311
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
V P+ +++ +L +C L +L GK +H + ++ + E+ + AL+ +YA+
Sbjct: 312 VKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMET---ALIDMYAK 363
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 147/331 (44%), Gaps = 39/331 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQAC K++ +++ L G L+ +Y C ++ A L + +
Sbjct: 220 SVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEK 279
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +T+++ + +G AR + M+ +GV P+ +L AC L + L+
Sbjct: 280 DVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVS-LKHGKCL 338
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ + +++DMY+KC + + +VF + ++ WN+++S +V N L+
Sbjct: 339 HAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLA 398
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAY----------------------CRM------ 216
+ AV++ + M ++ +PD T N+++ AY C++
Sbjct: 399 RNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASML 458
Query: 217 -------GLVSEASKVFEQI--KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
G + A ++F+ I KD ++I WT +I Y G +++ +F +MV G
Sbjct: 459 VDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEK- 517
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
P+ + VL +C G + G + LK
Sbjct: 518 PNEVTFTSVLHACSHAGLVDQGLSLFNLMLK 548
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC SL K LH + + + T LI +YA C++ ++ +F + +
Sbjct: 321 SLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKK 380
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++L+ + LAR ++ + EM + V PD F +L A A LA L+
Sbjct: 381 RTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILAD-LKQAMNM 439
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD--EMRERDVFSWNSMMSCYVCNG 182
L V + ++D+YSKCG + A ++FD ++++D+ W +++ Y +G
Sbjct: 440 HCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHG 499
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
+ AV + M G +P+ VT +V+ A GLV + +F + P+V +
Sbjct: 500 YGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHY 559
Query: 238 TTLISGYSSVGRHGVSLGIFREM 260
T ++ GR + + R M
Sbjct: 560 TCIVDLLGRAGRLNDAYNLIRTM 582
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 41/331 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++ACS ++ +H G F L+ +Y + + +A +F + +
Sbjct: 120 VIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERT 179
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ +++ R+ A + Y+ M +GV D VL+AC L + E
Sbjct: 180 VVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNV-ELGREVR 238
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V N++LDMY KCG++E A + + M E+DV +W ++++ YV NG ++
Sbjct: 239 ALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDAR 298
Query: 186 RAVEVLESMRVDGCEP-----------------------------------DVVTRNTVM 210
A+ + SM+++G +P +VV ++
Sbjct: 299 SALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALI 358
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY--SSVGRHGVSLGIFREMVNDGMVFP 268
D Y + + + KVF + W ++SG+ + + R+ V L F+EM+ + V P
Sbjct: 359 DMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQL--FKEMLLEN-VQP 415
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
D+ + +L + L L +H Y +K+
Sbjct: 416 DSPTFNSLLPAYAILADLKQAMNMHCYLVKL 446
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
NSLL A + L QA +H Y++ G K + L+ IY+ C L AH +F +P
Sbjct: 420 FNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIP 479
Query: 63 --QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
++ +T+I+ + +HG + + +M G P+ F VL AC+
Sbjct: 480 LKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSH 532
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 39/322 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ C +++ LH + HR ++KL+++YA + AH LF Q+ +
Sbjct: 116 SLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKR 175
Query: 65 NVFAF--TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+++AF S+++ ++ GL I Y +M +GV PD + FP+VLK C + L+
Sbjct: 176 DMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIG-LVGVGE 234
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N+++DMYSKCGD+ A ++F++M RD SWNSM++ YV +G
Sbjct: 235 EVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHG 294
Query: 183 LSQRAVEVLESMRVDGCEPDVVT--------------------------------RNTVM 210
L A+ + M + G +PD + N+++
Sbjct: 295 LEVEAINIFRQMVLKGEKPDYFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLI 354
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
AY + G + +A +F + + +V+SW ++IS + +H ++ F +M G V PD
Sbjct: 355 IAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHC---KHPEAISYFEKMEEAGEV-PDK 410
Query: 271 GALSGVLVSCRCLGALASGKEI 292
+L +C LG + G+ +
Sbjct: 411 ITFVSLLSACAHLGLVNDGERL 432
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ C + +++H +++ G F L+ +Y+ C D+ A +F ++ +
Sbjct: 220 VLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRD 279
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ S+L + RHGL + I + +M KG PD + +L + + L +
Sbjct: 280 SVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSL----DVGVQIH 335
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L + NS++ YSK G ++ A +F+ M ERDV SWNS++S + C
Sbjct: 336 GWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSH-CK--HP 392
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
A+ E M G PD +T +++ A +GLV++ ++F
Sbjct: 393 EAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLF 433
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 44/262 (16%)
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
KG+ D ++ +L+ C + A+ ++ + + ++ +Y+ G ++
Sbjct: 105 KGIKIDPEIYASLLETCYRFGAI-HHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMD 163
Query: 155 GAARVFDEMRERDV--FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------- 205
A +FD+M +RD+ F WNS++S Y GL A+ + M +G EPD+ T
Sbjct: 164 DAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKV 223
Query: 206 ----------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
N ++D Y + G + +A K+F ++ + +SW
Sbjct: 224 CGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSW 283
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++++GY G ++ IFR+MV G PD ++S +L S + +L G +IHG+ +
Sbjct: 284 NSMLTGYVRHGLEVEAINIFRQMVLKGEK-PDYFSISAILTS---VSSLDVGVQIHGWVI 339
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
+ G + S +L+ Y++
Sbjct: 340 R--QGVEWNLSIANSLIIAYSK 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ ++ SL+ Q+H +++ G LI Y+ L A S+F +P+
Sbjct: 317 SISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPER 376
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ SI++ H +H + I + +M G PD F +L ACA L + +
Sbjct: 377 DVVSWNSIISSHCKHP---EAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLF 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS--WNSMMSCYVCNG 182
+ ++++Y + G VE A + M V W +++ Y C
Sbjct: 434 ALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALL--YACLL 491
Query: 183 LSQRAVEVLESMRVDGCEPD 202
+ + + ++ EPD
Sbjct: 492 HGNVTIGEISANKLFELEPD 511
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 15/313 (4%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFF--------TTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+L KQ+H M+++G + F +T L+ A AH LF Q+PQP+
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
F + ++ S+ + I Y EM V D Y FP VLKAC +L +
Sbjct: 74 FMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRL-FWVNTGSAVHG 132
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ V N++L ++KCGD+ A +FD+ + DV +W+S+++ Y G +
Sbjct: 133 MVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKV 192
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS 246
A ++ M E D+V+ N ++ Y + G + A +F++ +V+SW +I+GY
Sbjct: 193 ARKLFNEMP----ERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVV 248
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
G +L +F EM G VFPD L +L +C LG L +GK++H ++I G++
Sbjct: 249 CGLSKQALELFNEMCRAG-VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKL-S 306
Query: 307 RSAGAALLTLYAR 319
G AL+ +YA+
Sbjct: 307 TLLGNALIDMYAK 319
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 132/320 (41%), Gaps = 77/320 (24%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ +N +H +L G L+ +A C DL A SLF + +
Sbjct: 114 VLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGD 173
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V A++S++A ++R G + + + EM P+
Sbjct: 174 VVAWSSLIAGYARRGDLKVARKLFNEM------PE------------------------- 202
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
DL N ++ Y K G++E A +FDE +DV SWN+M++ YV GLS+
Sbjct: 203 ---------RDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSK 253
Query: 186 RAVEVLESMRVDGCEPDVVTR------------------------------------NTV 209
+A+E+ M G PD VT N +
Sbjct: 254 QALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNAL 313
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G + E+ VF I D +VISW ++I G + G SL +F+ M+ + P+
Sbjct: 314 IDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFK-MMQRTKICPN 372
Query: 270 AGALSGVLVSCRCLGALASG 289
GVLV+C G + G
Sbjct: 373 EITFVGVLVACSHAGEIDEG 392
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 41/276 (14%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+SL+ + L A++L + M R +I Y ++ SA LF + P
Sbjct: 178 SSLIAGYARRGDLKVARKLFNEM----PERDLVSWNVMITGYVKQGEMESARMLFDEAPV 233
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V ++ +++A + GL++Q +E + EM GV PD +L ACA L L
Sbjct: 234 KDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKV 293
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ N+++DMY+KCG+++ + VF + ++DV SWNS++ +G
Sbjct: 294 HAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGH 353
Query: 184 SQRAVEVLESM-RVDGC-----------------------------------EPDVVTRN 207
+ ++ + + M R C EP++
Sbjct: 354 GKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCG 413
Query: 208 TVMDAYCRMGLVSEASKVFEQIK-DPNVISWTTLIS 242
++D R GL+ EA+K + +K +PN I W TL++
Sbjct: 414 CMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLA 449
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 13/250 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L SLL AC+ L K++H M + LI +YA C +++ + +F +
Sbjct: 274 LLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSI 333
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++ S++ + HG ++ + + M+ + P+ F VL AC+ + E
Sbjct: 334 TDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGY 393
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVC 180
++R C ++DM + G ++ AA+ D M+ E + W ++++
Sbjct: 394 KYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKV 453
Query: 181 NG---LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
+G L++ A E L SMR D V+ N Y G A KV + + D V
Sbjct: 454 HGDVELAKVANEKLFSMRKDHSGDYVLMSNL----YASRGEWDGAEKVRKLMDDSGV--- 506
Query: 238 TTLISGYSSV 247
T I G S V
Sbjct: 507 -TKIRGSSFV 515
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 42/344 (12%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
S + Q+H+ ++L G F TKL+ ++ + A LF + P P++F + +I
Sbjct: 57 STHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAI 116
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ +SR+ + R IE Y M++ G+ PD + FP VLKAC++L
Sbjct: 117 IRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELLD-FGLSCLVHAHVIVYG 175
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
+ V N ++ +Y+KCG + A VFD + +R + SW +++S Y NG A+ + +
Sbjct: 176 FGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFD 235
Query: 193 SMRVDGCEPDVVTRNTVMDAYC----------------RMGL------------------ 218
MR +PD ++ +VM AY +MGL
Sbjct: 236 QMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCG 295
Query: 219 -VSEASKVFEQIKDPN-VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
V+ A F+++K PN V+ W +ISGY+ G ++ +F+ M++ + PD+ L
Sbjct: 296 EVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRN-IKPDSITLRSA 354
Query: 277 LVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
+++C +G+L + + Y K G+IF L+ +YA+
Sbjct: 355 VLACAQVGSLKLAQWMDDYVRKSKYGGDIF---VNTTLIDMYAK 395
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%), Gaps = 2/230 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+++A + L Q + LH ++ G +P L YA C ++ A S F ++
Sbjct: 249 LVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMK 308
Query: 63 QPN-VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
PN V + ++++ ++++G A + +E + M + + PD + ACAQ+ +L +
Sbjct: 309 TPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSL-KLA 367
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V +++DMY+KCG VE A VFD +DV W++M+ Y +
Sbjct: 368 QWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLH 427
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
G A+ + +M+ +G P+ VT ++ A GL+ + ++F ++D
Sbjct: 428 GQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCMRD 477
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 38/323 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS + +H +++++G F L+ +YA C + A +F +L
Sbjct: 151 VLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRT 210
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++T+I++ + ++G + + + +MR V PD V++A + LE
Sbjct: 211 IVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDD-LEQGRSLH 269
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD-VFSWNSMMSCYVCNGLS 184
+ + S+ Y+KCG+V A FD+M+ + V WN+M+S Y NG +
Sbjct: 270 GCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHA 329
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
+ AVE+ ++M +PD +T T+
Sbjct: 330 EEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTL 389
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G V A VF++ +V+ W+ +I GY G+ ++ ++ M +G V P+
Sbjct: 390 IDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEG-VCPN 448
Query: 270 AGALSGVLVSCRCLGALASGKEI 292
G+L +C G + G E+
Sbjct: 449 DVTFIGLLTACSHSGLIKQGWEL 471
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 175/352 (49%), Gaps = 39/352 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR--Q 60
L S+L+ CS+ + + +H +++ +G F T L+ +YA C + A LF+ +
Sbjct: 136 LGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE 195
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ N +T+++ ++++G + +E + M +GV + Y FP +L AC+ + A
Sbjct: 196 FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC-F 254
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ V ++++DMY+KCGD++ A + + M + DV SWNS+M +V
Sbjct: 255 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 314
Query: 181 NGLSQRAVEVLE-----SMRVD----------------------------GCEPDVVTRN 207
+GL + A+ + + +M++D G E + N
Sbjct: 315 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN 374
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + G + A VFE++ + +VISWT+L++GY+ H SL IF +M G V
Sbjct: 375 ALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG-VN 433
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD ++ +L +C L L GK++H +K G + +S +L+ +YA+
Sbjct: 434 PDQFIVASILSACAELTLLEFGKQVHLDFIK--SGLRWSQSVYNSLVAMYAK 483
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 161/355 (45%), Gaps = 50/355 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L ACS+ + +Q+H +++ G + + L+ +YA C DL++A ++ +
Sbjct: 241 TILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDD 300
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ S++ RHGL + + + M + + D Y FP VL C + +
Sbjct: 301 DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVH 358
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L V N+++DMY+K GD++ A VF++M E+DV SW S+++ Y N
Sbjct: 359 GLIIKTGFENYKL-VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH 417
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------------- 212
+ ++++ MRV G PD +++ A
Sbjct: 418 EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSL 477
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y + G + +A +F ++ +VI+WT +I GY+ G+ SL + MV+ G PD
Sbjct: 478 VAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSG-TRPD 536
Query: 270 AGALSGVLVSCRCLGALASGKEIHG-----YGLKIMPGEIFYRSAGAALLTLYAR 319
G+L +C G + G++ YG+K PG Y A ++ L+ R
Sbjct: 537 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIK--PGPEHY----ACMIDLFGR 585
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 11/277 (3%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
C S+N K +H ++ G + L+ +YA D+ A+++F ++ + +V ++
Sbjct: 346 CCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISW 404
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
TS++ ++++ + ++ + +MR GV+PD ++ +L ACA+L LLE
Sbjct: 405 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELT-LLEFGKQVHLDFI 463
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
V NS++ MY+KCG ++ A +F M+ +DV +W +++ Y NG + +++
Sbjct: 464 KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK 523
Query: 190 VLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGY 244
++M G PD +T ++ A GLV E K F+Q+ P + +I +
Sbjct: 524 FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLF 583
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
GR G L +++++ V PDA +L +CR
Sbjct: 584 ---GRSG-KLDEAKQLLDQMDVKPDATVWKSLLSACR 616
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 71/247 (28%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV--------------CN----- 181
N +L+ SK G V A ++FD+M ++D +SWN+M+S YV C+
Sbjct: 40 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 99
Query: 182 ------------GLSQRAVEVLESMRVDGCEPDVVTRNTVM------------------- 210
G A ++ SMR++G + T +V+
Sbjct: 100 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 159
Query: 211 ----------------DAYCRMGLVSEASKVFE--QIKDPNVISWTTLISGYSSVGRHGV 252
D Y + VSEA +F+ + N + WT +++GY+ G
Sbjct: 160 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 219
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAA 312
++ FR M G V + +L +C + A G+++HG+ +K G Y +A
Sbjct: 220 AVEFFRYMHAQG-VECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVY--VQSA 276
Query: 313 LLTLYAR 319
L+ +YA+
Sbjct: 277 LVDMYAK 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC+ L KQ+H + G L+ +YA C L A ++F +
Sbjct: 441 SILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK 500
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +T+I+ ++++G R ++ Y M G PD F +L AC+ + E
Sbjct: 501 DVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYF 560
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMS-CYVCNG 182
++D++ + G ++ A ++ D+M + D W S++S C V
Sbjct: 561 QQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHEN 620
Query: 183 --LSQRAVEVLESMRVDGCEPDVVTRN 207
L++RA L + P V+ N
Sbjct: 621 LELAERAATNLFELEPMNAMPYVMLSN 647
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 8/271 (2%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
++ A S F Q+ +PN + +++ + Q + Y M V P Y F ++K
Sbjct: 27 NINFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIK 86
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
AC L + + V ++++ YS G V A +VFDEM RDV+
Sbjct: 87 ACTLLTDAVNGKTLHGHVWKYGFDS-HVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVY 145
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCE-PDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
+W +M+S YV N VE E + V+ E + T N V+D Y ++G + F++
Sbjct: 146 AWTTMISAYVRNN----DVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKE 201
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS 288
I ++ISWTTL+S Y R+G + +F EMVN+G V PD A++ V+ +C LGAL
Sbjct: 202 IPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGF 261
Query: 289 GKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
GKE+H Y + G Y G++L+ +YA+
Sbjct: 262 GKEVHFYLMVSGFGIDVY--IGSSLIDMYAK 290
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSP 99
+I YA ++ F+++P ++ ++T++++ + ++ + ++ + EM +G V P
Sbjct: 182 VIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVP 241
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
D V+ ACA L AL D+ + +S++DMY+KCG +E + V
Sbjct: 242 DEVAITTVISACAHLGAL-GFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLV 300
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F +++E+++F WNSM+ +G ++ A+ + M +G P+ VT +V+ A G +
Sbjct: 301 FYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFI 360
Query: 220 SEASKVFEQIKDPNVIS 236
E + F + + IS
Sbjct: 361 QEGRRFFTSMIEDYCIS 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 76/324 (23%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+SL++AC+ K LH ++ +G F T L++ Y+ + A +F ++
Sbjct: 81 FSSLIKACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMS 140
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V+A+T++++ + R+ + EM P+G
Sbjct: 141 ARDVYAWTTMISAYVRNNDVESAEILFVEM------PEG--------------------- 173
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ N+V+D Y+K G++E F E+ +D+ SW ++MSCY+ N
Sbjct: 174 ------------KNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNK 221
Query: 183 LSQRAVEVLESMRVDG-CEPDVVTRNTVM------------------------------- 210
V++ M +G PD V TV+
Sbjct: 222 RYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIG 281
Query: 211 ----DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
D Y + G + + VF ++K+ N+ W ++I G ++ G +L +F EM +G +
Sbjct: 282 SSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREG-I 340
Query: 267 FPDAGALSGVLVSCRCLGALASGK 290
P+ VL +C G + G+
Sbjct: 341 RPNRVTFVSVLTACTHAGFIQEGR 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ +++ AC+ +L K++H Y+++ G + + LI +YA C L + +F +L
Sbjct: 246 ITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLK 305
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N+F + S++ + HG A++ + +AEM +G+ P+ F VL AC + E
Sbjct: 306 EKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRR 365
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS-CYVC 180
+ ++D+ SK G +E A + MR E + F W ++++ C V
Sbjct: 366 FFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVH 425
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
L V V M + EP +++ + Y + S+ +K+ ++KD V
Sbjct: 426 RNLEIARVTVRNLMIL---EPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGV 477
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 157/358 (43%), Gaps = 46/358 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-----SHRKPFFTTKLIQIYADCDDLRSAHSL 57
+ L + +L Q K+LH +L+HG S P + L+ Y + A
Sbjct: 34 FTTFLHHLKSPPNLLQTKKLHALLLIHGFFHPSSPHTPL-CSHLVNAYVNFGSHHYAFLF 92
Query: 58 FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
F QLP + A+ +IL I+ Y M G +PD Y +P VLKAC+ L A
Sbjct: 93 FSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYPLVLKACSSLQA- 151
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
+E +L V +++DM+ KC +E A +VFDEM RD+ +W +++
Sbjct: 152 IEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWTALICG 211
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVV--------------------------------- 204
V NG AV + MR++G + D V
Sbjct: 212 NVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDS 271
Query: 205 ---TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N ++D YC+ G EA VF + +++SW+TLI+GYS G + S ++ MV
Sbjct: 272 DLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMV 331
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
N G+ + +S VL + L GKE+H + LK G + G+AL+ +YA
Sbjct: 332 NMGLT-TNEIVVSTVLPALGKLKLFKQGKEMHNFVLK--QGLLTDVVVGSALVDMYAN 386
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 40/350 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS+ +++ + ++H +L++ F LI ++ C+ L A +F ++ +
Sbjct: 142 VLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVRD 201
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +T+++ + +G + + + +MR +G+ D + VL C +L L+
Sbjct: 202 LATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMH 261
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
DL V N+++DMY KCG + A VF M RD+ SW+++++ Y NG+ +
Sbjct: 262 GCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYK 321
Query: 186 RAVEVLESM-----------------------------------RVDGCEPDVVTRNTVM 210
+ E+ M G DVV + ++
Sbjct: 322 ESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALV 381
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGMVFPD 269
D Y G + EA +F + D +++ W +LI+GY+ VG + FRE+ V + P+
Sbjct: 382 DMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHR--PN 439
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L VL C +GAL GKEIH Y + G S G +L+ +Y++
Sbjct: 440 HITLVSVLPICTQIGALRQGKEIHCYATR--SGLGLNISVGNSLIDMYSK 487
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 140/284 (49%), Gaps = 10/284 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++++L A K Q K++H+++L G + L+ +YA+C ++ A S+FR +
Sbjct: 342 VSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNML 401
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ + S++A ++ G + T+ E+ P+ VL C Q+ AL +
Sbjct: 402 DMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKE 461
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V NS++DMYSKCG +E +VF++M ++ ++N+M+S +G
Sbjct: 462 IHCYATRSGLGL-NISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHG 520
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
L ++ ++ E M G +P+ VT +++ A GLV ++ + + P++ +
Sbjct: 521 LGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHY 580
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ ++ +GR G G ++ + V PDA L +L +CR
Sbjct: 581 SCMV---DLIGRTGDLDGAYK-FITTMPVTPDANVLGSLLGACR 620
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 141/310 (45%), Gaps = 48/310 (15%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC--DDLRSAHSLFR 59
H L C K++++ KQ H +++ G + PF KLI Y+ ++ A +F
Sbjct: 22 HYTDQLHHC---KTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFD 78
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
L + +VF + +++ ++ G + + Y MR G +P+ Y +P VLKAC L+
Sbjct: 79 DLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLK 138
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
DL V N+ + Y+KC ++E + +VFDEM ERD+ SWNSMMS Y+
Sbjct: 139 GRIIHGNVVKCGLEF-DLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYI 197
Query: 180 CNGLSQRAVEVL-ESMRVDGCE-PDVVTRNTVMDA------------------------- 212
NG AV + + +R DG PD T TV+ A
Sbjct: 198 ANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLD 257
Query: 213 ----------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
Y G + A VF+QI D NVI W+ +I Y G +L +FR++V
Sbjct: 258 PAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVE 317
Query: 263 -----DGMVF 267
DG+VF
Sbjct: 318 LGLHLDGIVF 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 48/225 (21%)
Query: 136 DLRVCNSVLDMYSKCG--DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D + ++D YS+ G +VE A +VFD++ ERDVF WN+++ Y G A+ V +
Sbjct: 51 DPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNA 110
Query: 194 MRVDGCEPDVVTRNTVMDA-----------------------------------YCRMGL 218
MR+ G P+ T V+ A Y +
Sbjct: 111 MRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKE 170
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV-NDGMVFPDAGALSGVL 277
+ + KVF+++ + +++SW +++SGY + G ++ +F +M+ +DG+ FPD L VL
Sbjct: 171 IEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVL 230
Query: 278 VSCRCLGALASGKEIHGY----GLKIMPGEIFYRSAGAALLTLYA 318
+ + +G IH Y G+K+ P + G L+TLY+
Sbjct: 231 PAFAEKADIHAGYWIHCYIVKTGMKLDP------AVGCGLITLYS 269
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC A + + + +H ++ G F + YA C ++ ++ +F ++ + +
Sbjct: 126 VLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERD 185
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM-RFKGVS-PDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ S+++ + +G + + + +M R G+ PD VL A A+ A +
Sbjct: 186 IVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADI-HAGYW 244
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V ++ +YS CG + A VFD++ +R+V W++++ CY +G
Sbjct: 245 IHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGF 304
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+Q A+ + + G D + +++ A G+ E +F+ ++ V+
Sbjct: 305 AQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETYGVVK 357
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L A + ++ +H Y++ G P LI +Y++C +R A ++F Q+P
Sbjct: 226 LVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIP 285
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
NV +++I+ + HG A++ + + ++ G+ DG VF +L AC+
Sbjct: 286 DRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSH 336
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 41/352 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHG--SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+L++ C ++ + ++ Y+ +H L+ ++ +L A +F ++P
Sbjct: 102 ALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMP 161
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N+F++ ++ +++ G + + Y M + GV PD Y FP VL+ C + L++
Sbjct: 162 ERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVK-GR 220
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V N+++ MY+KCGD++ A VFD+M ++D SWN+M++ NG
Sbjct: 221 EIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENG 280
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------ 212
+ + M +PD++T +V+ A
Sbjct: 281 ECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYN 340
Query: 213 -----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y +GLV EA KVF Q + +V+ WT +ISGY + H +L ++ M +G++
Sbjct: 341 SLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGII- 399
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD + VL +C CL L +G +H K G IFY L+ +YA+
Sbjct: 400 PDEITIGVVLSACSCLCDLDTGMNLHEKAKK--TGLIFYVIVANKLIDMYAK 449
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 40/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ C L + +++H ++L G LI +YA C D+ +A +F ++P+ +
Sbjct: 206 VLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKD 265
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ +++A +G + + + M V PD V+ AC +L
Sbjct: 266 RISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITAC-ELIGDERLGREIH 324
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V NS++ MYS G VE A +VF + RDV W +M+S Y N + Q
Sbjct: 325 GYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQ 384
Query: 186 RAVEVLESMRVDGCEPD-----------------------------------VVTRNTVM 210
+A+E + M +G PD V+ N ++
Sbjct: 385 KALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLI 444
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + + +A +VF I+D N+ISWT++I G R +L F+EM+ P+
Sbjct: 445 DMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQK--PNW 502
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L VL +C +GA GKEIH Y L+ + Y A+L +Y R
Sbjct: 503 VTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMP--NAVLDMYVR 549
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 143/339 (42%), Gaps = 40/339 (11%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M + S++ AC +++H Y++ R P LIQ+Y+ + A +F Q
Sbjct: 302 MTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQ 361
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+V +T++++ + + + ++ +ETY M +G+ PD VL AC+ L L+
Sbjct: 362 TECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCD-LDT 420
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V N ++DMY+KC ++ A VF +R++++ SW S++
Sbjct: 421 GMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRI 480
Query: 181 NGLSQRAVEVLESM-------------------RV---------------DGCEPDVVTR 206
N A+ + M R+ G D
Sbjct: 481 NNRCYDALFFFKEMMRRQKPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMP 540
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N V+D Y R G + A K F I D +V +W L++GY+ G+ ++ +FR M+ +V
Sbjct: 541 NAVLDMYVRCGRMEYAWKQFFSI-DQDVSTWNILLTGYAERGKGTLATELFRRMLESNVV 599
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHG---YGLKIMPG 302
P+ +L +C G +A G E + Y I P
Sbjct: 600 -PNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPN 637
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 17/298 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS L+ LH G KLI +YA C + A +F + N
Sbjct: 408 VLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKN 467
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++TSI+ + + + EM + P+ VL ACA++ A
Sbjct: 468 IISWTSIILGLRINNRCYDALFFFKEM-MRRQKPNWVTLVCVLSACARIGAF-TCGKEIH 525
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D + N+VLDMY +CG +E A + F + ++DV +WN +++ Y G
Sbjct: 526 AYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSI-DQDVSTWNILLTGYAERGKGT 584
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A E+ M P+ VT +++ A R G+V+E + ++ +K PN+ + +
Sbjct: 585 LATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNLKHYACV 644
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALASGKEIH 293
+ +GR G L E + + PD +L +CR LG LA+ H
Sbjct: 645 V---DLLGRAG-KLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELGELAAKNIFH 698
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y D+ A LF +LP NV ++T ++ + + +E + EM+ GV PD
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPD 222
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
++ ACA L AL +++V NS++DMY++CG +E A +VF
Sbjct: 223 FVTVIAIISACANLGAL-GLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVF 281
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
D M +R++ SWNS++ + NGL+ +A+ SM+ +G EP+ V+ + + A GL+
Sbjct: 282 DGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLID 341
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E K+F IK P + + L+ YS GR + + ++M + P+ L
Sbjct: 342 EGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMP----MMPNEVVLGS 397
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMPG 302
+L +CR G + +++ Y +++ PG
Sbjct: 398 LLAACRTQGDVELAEKVMKYQVELYPG 424
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 119/305 (39%), Gaps = 71/305 (23%)
Query: 58 FRQLPQPN-VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ--- 113
+ P N ++TS ++ H ++ + + +M V P+ +L ACA
Sbjct: 43 LKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS 102
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
++ D+ V +++DMY+KCG ++ A VFD+M R++ SWN+
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNT 162
Query: 174 MMSCYVCNG-------------------------------LSQRAVEVLESMRVDGCEPD 202
M+ Y+ NG + A+E M++ G PD
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPD 222
Query: 203 VVT-----------------------------------RNTVMDAYCRMGLVSEASKVFE 227
VT N+++D Y R G + A +VF+
Sbjct: 223 FVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFD 282
Query: 228 QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
+ N++SW ++I G++ G +L FR M +G+ P+ + + L +C G +
Sbjct: 283 GMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLE-PNGVSYTSALTACSHAGLID 341
Query: 288 SGKEI 292
G +I
Sbjct: 342 EGLKI 346
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 149/327 (45%), Gaps = 40/327 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ--P 64
LQ C+ + +L + KQLH ++L +G P T +I +Y+ C + A +F
Sbjct: 36 LQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDK 95
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXX 123
NVFA+ +I+A +GL++ Y +MR GV PD + FP V++AC + E
Sbjct: 96 NVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKI 155
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++++ Y K V A VF+E+ RDV WNSM++ Y G
Sbjct: 156 HGLLFKFGLEL-DVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214
Query: 184 SQRAVEVLESMRVDGCEP-----------------------------------DVVTRNT 208
+ A+ + M +G P VV N
Sbjct: 215 FEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNA 274
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + S+A VFE + + ++ SW ++IS + G H +L +F M+ + V P
Sbjct: 275 LIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNK-VQP 333
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGY 295
D ++ VL +C L AL G+EIHGY
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGY 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ +L S + + +H ++ G H LI +Y C A ++F +
Sbjct: 237 VTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMD 296
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE--- 119
+ ++F++ SI++ H R G ++ + M V PD VL AC LAAL+
Sbjct: 297 EKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGRE 356
Query: 120 ----XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
D+ + N+++DMY+KCG + A VFD M E+DV SWN M+
Sbjct: 357 IHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMI 416
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---- 231
+ Y +G A++ MR P+ ++ ++ A G+V E + ++
Sbjct: 417 TGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGV 476
Query: 232 -PNVISWTTLISGYSSVGR 249
P+V +T +I G+
Sbjct: 477 PPSVEHYTCVIDMLCRAGK 495
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 45/329 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++AC + + + K++H + G F + L+ Y + AH +F +LP +
Sbjct: 139 VIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRD 198
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + S++ +++ G + + + M GV P Y VL + + +
Sbjct: 199 VVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGD-FDNGQAVH 257
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V N+++DMY KC A VF+ M E+D+FSWNS++S + G
Sbjct: 258 GFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHY 317
Query: 186 RAVEVLESMRVDGCEPDVVT---------------------------------------- 205
+++ + M + +PD+VT
Sbjct: 318 GTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDD 377
Query: 206 ---RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
N +MD Y + G + +A VF+ + + +V SW +I+GY G +L F M
Sbjct: 378 VLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQ 437
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKE 291
+V P+ + G+L +C G + G E
Sbjct: 438 AQLV-PNEISFVGLLSACSHAGMVKEGLE 465
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD--EMRE 165
L+ CAQ L + L + S+++MYSKC + A +VF+ +
Sbjct: 36 LQQCAQTTNLTKGKQLHTHLLKNGFFASPLAI-TSIINMYSKCTLINYALKVFNYPTHHD 94
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC-------------------------- 199
++VF++N++++ +V NGLSQ + + + MR+ G
Sbjct: 95 KNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKK 154
Query: 200 ----------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR 249
E DV + ++ Y + LV +A +VFE++ +V+ W ++++GY+ +G
Sbjct: 155 IHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+LG+FR MV +G+V P ++GVL +G +G+ +HG+ K+
Sbjct: 215 FEEALGMFRRMVENGVV-PCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKM 263
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 207 NTVMDAYCRMGLVSEASKVFEQIK--DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++++ Y + L++ A KVF D NV ++ +I+G+ S G S G++++M G
Sbjct: 68 TSIINMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLG 127
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHG----YGLKIMPGEIFYRSAGAALLTLYAR 319
+V PD V+ +C G + K+IHG +GL++ ++F G+AL+T Y +
Sbjct: 128 VVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLEL---DVF---VGSALVTTYLK 180
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 39/311 (12%)
Query: 12 ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
+S SL KQLH + + G + F TKL+Q+Y+ A +F ++ N+ ++T+
Sbjct: 43 SSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTA 102
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSP--DGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+L H GL + + E G+ D +VFP VL C L L E
Sbjct: 103 VLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDL-ELGRQVHGMVL 161
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
++ V N+++DMY KCG ++ A +V + M ++D SWNS+++ V NG+ A++
Sbjct: 162 KHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALD 221
Query: 190 VLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR 249
+LE+M + EP+VVT W+ +I G+SS
Sbjct: 222 LLENMLLSELEPNVVT-------------------------------WSAVIGGFSSNAY 250
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS- 308
S+ +F MV G V PDA L+ VL +C + L GKE+HGY I+ E+F
Sbjct: 251 DVESVELFARMVGAG-VAPDARTLASVLPACSRMKWLFVGKELHGY---IVRHELFSNGF 306
Query: 309 AGAALLTLYAR 319
AL+ +Y R
Sbjct: 307 VANALVGMYRR 317
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 143/353 (40%), Gaps = 72/353 (20%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L ACS K L K+LH Y++ H F L+ +Y C D++SA +F +
Sbjct: 273 LASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFA 332
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMR----------------------------- 93
+ ++ +++ + +G + E + +M
Sbjct: 333 RKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALM 392
Query: 94 ------FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
+G+ PD + +L A + + + V ++++MY
Sbjct: 393 LFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSF-VGGALVEMY 451
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYV-CNGLSQRAVEVLESMRVDGCEPDVVTR 206
KC D+ A FDE+ ERD +WN+++S Y CN + + E++E M+ DG EP
Sbjct: 452 CKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIG-KIRELVERMKSDGFEP----- 505
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
NV +W ++++G ++ +++ +F EM +
Sbjct: 506 --------------------------NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLR 539
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD + +L +C L + GK++H Y ++ G GA L+ +YA+
Sbjct: 540 -PDIYTVGIILAACSKLATIHRGKQVHAYSIR--AGYDSDAHIGATLVDMYAK 589
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 133/349 (38%), Gaps = 70/349 (20%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-- 63
+L C L +Q+H +L HG + LI +Y C L A + + Q
Sbjct: 140 VLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD 199
Query: 64 ---------------------------------PNVFAFTSILAFHSRHGLARQCIETYA 90
PNV +++++ S + + +E +A
Sbjct: 200 CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFA 259
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
M GV+PD VL AC+++ L V N+++ MY +C
Sbjct: 260 RMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGF-VANALVGMYRRC 318
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
GD++ A ++F + + S+N+M+ Y+ NG +A E+ M +G E D
Sbjct: 319 GDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERD-------- 370
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
ISW +ISG+ +L +FR+++ +G + PD+
Sbjct: 371 -----------------------RISWNCMISGHVDNFMFDDALMLFRDLLMEG-IEPDS 406
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L +L + + GKEIH + I+ G G AL+ +Y +
Sbjct: 407 FTLGSILTGFADMTCIRQGKEIH--SIAIVKGLQSNSFVGGALVEMYCK 453
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 132/330 (40%), Gaps = 41/330 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L + + Q K++H ++ G F L+++Y C+D+ +A F ++
Sbjct: 409 LGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEIS 468
Query: 63 Q-----------------------------------PNVFAFTSILAFHSRHGLARQCIE 87
+ PNV+ + SILA + ++
Sbjct: 469 ERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQ 528
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
+ EM+ + PD Y +L AC++LA + D + +++DMY
Sbjct: 529 LFNEMQVSSLRPDIYTVGIILAACSKLATI-HRGKQVHAYSIRAGYDSDAHIGATLVDMY 587
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
+KCG ++ +V++++ ++ N+M++ Y +G + + + M PD VT
Sbjct: 588 AKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFL 647
Query: 208 TVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+V+ + G + + F ++ P + +T ++ S G+ + + + M +
Sbjct: 648 SVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPME 707
Query: 264 GMVFPDAGALSGVLVSCR-CLGALASGKEI 292
+ L G + LG +A+ K I
Sbjct: 708 ADSVTWSALLGGCFIHKEVALGEIAAEKLI 737
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 166/361 (45%), Gaps = 53/361 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHSLFRQL-P 62
LLQ C ++ L+ Q+H +++ GS F +KL+ +YA C+ R A FR +
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVK 168
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXX 121
N+F++ +I+ +R+GL ++ + +Y EM KG PD +V P LKAC L +
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRG 228
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM--RERDVFSWNSMMSCYV 179
+ V S++DMY KCG +E A +VFDEM R+R+ WNSM+ YV
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 180 CNGLSQRAVEVLESMRVD-GCEP-----------------------------------DV 203
NG++ AV + E MR + G EP +
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNY 348
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQ---IKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
V +++M+ Y ++GL+ E VF +KD ++W +IS Y G +L + M
Sbjct: 349 VLGSSIMNFYSKVGLIEEVELVFRSMAVLKDE--VTWNLMISSYVQFGMFEKALEMCHWM 406
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG--AALLTLYA 318
+ + D LS +L + GK++HG+ ++ FY + +L +YA
Sbjct: 407 REEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIR----NEFYSDMAVLSGVLDMYA 462
Query: 319 R 319
+
Sbjct: 463 K 463
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 149/311 (47%), Gaps = 25/311 (8%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ AC+ +++ + KQ H ++L G + ++ Y+ + +FR +
Sbjct: 316 LSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMA 375
Query: 63 -QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + +++ + + G+ + +E MR + F C L++LL
Sbjct: 376 VLKDEVTWNLMISSYVQFGMFEKALEMCHWMR----EEENLRFD-----CVTLSSLLALA 426
Query: 122 XXXXXXXXXXXX---------XXDLRVCNSVLDMYSKCGDVEGAARVFD-EMRERDVFSW 171
D+ V + VLDMY+KCG ++ A VF +++D+ W
Sbjct: 427 ADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLW 486
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK- 230
N+M++ GLS A+++ M+++ P+VV+ N+++ + R G V EA +F +++
Sbjct: 487 NTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQL 546
Query: 231 ---DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
PN+I+WTT+ISG + G + +F++M GM P++ +++ L +C + L
Sbjct: 547 SGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMR-PNSISITSALSACTNMALLN 605
Query: 288 SGKEIHGYGLK 298
G+ IHGY ++
Sbjct: 606 YGRSIHGYVMR 616
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 16/310 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N++L AC+ +A +L M + LI + + A +F ++
Sbjct: 487 NTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQL 546
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN+ +T++++ +++GL + + +M+ G+ P+ L AC +A LL
Sbjct: 547 SGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMA-LLN 605
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
L++ S++DMY+KCG+++ A VF +++ +N+M+S Y
Sbjct: 606 YGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYA 665
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE------QIKDPN 233
+G S A+ + + + G PD +T +V+ A L+ E ++F+ Q+K P+
Sbjct: 666 SHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMK-PS 724
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ L+ ++ G+ +L I M + PDA L +L +C I
Sbjct: 725 EKHYGCLVKLLTNDGQLDEALRIILTMPSP----PDAHILGSLLAACGQNHETELANYIA 780
Query: 294 GYGLKIMPGE 303
+ LK+ P
Sbjct: 781 KWLLKVEPNN 790
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L Q KQ+H ++ H F + ++ +Y C +++SA +F Q+P P+ A+T++++
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+G Q + TY +MR GV PD Y F ++KAC+ L A LE
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMKLNCAF 634
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D V S++DMY+KCG++E A +F M R V WN+M+ +G ++ A+ M+
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRH 250
G PD VT V+ A GL S+A K F+ ++ +P + ++ L+ S G
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLV-SCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
+ E V M F + + L+ +CR G +G+ + + P + SA
Sbjct: 755 QEA-----EKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSD----SA 805
Query: 310 GAALLT-LYA 318
LL+ +YA
Sbjct: 806 AYVLLSNIYA 815
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 36/329 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ++ L KQ+H ++ G + I +Y + A +F Q+ + +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++++ +R GL + + ++ G+ PD + VL+AC+ L
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V +++D+YSK G +E A +F D+ SWN+MM + + +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
A+ + M G + D +T + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + A KVF QI P+ ++WTT+ISG G +L + +M G V PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDE 601
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ ++ +C L AL GK+IH +K+
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANIMKL 630
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 11/325 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L + C S + ++ L Y + G F L+ IYA +R A LF ++P
Sbjct: 125 LSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL---LE 119
+V + ++ + G + + ++ G+ PD +L + LE
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE 244
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
D+ V N L Y + G+ A F +M + D ++ ++
Sbjct: 245 QVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVIL 304
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
S + ++ ++ G + V N+ ++ Y + G V+ A ++F Q+K+ ++I
Sbjct: 305 SVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLI 364
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALASGKEIHG 294
SW T+ISG + G SL +F +++ G++ PD ++ VL +C L + G+++H
Sbjct: 365 SWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
LK G + AL+ +Y++
Sbjct: 424 CALK--AGIVLDSFVSTALIDVYSK 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L++ACS +L Q KQ+H ++ PF T L+ +YA C ++ A+ LFR++
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++ ++HG A + + + EM+ +GV+PD F VL AC+ +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ + ++D S+ G ++ A +V M
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L Q KQ+H ++ H F + ++ +Y C +++SA +F Q+P P+ A+T++++
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+G Q + TY +MR GV PD Y F ++KAC+ L A LE
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMKLNCAF 634
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D V S++DMY+KCG++E A +F M R V WN+M+ +G ++ A+ M+
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRH 250
G PD VT V+ A GL S+A K F+ ++ +P + ++ L+ S G
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLV-SCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
+ E V M F + + L+ +CR G +G+ + + P + SA
Sbjct: 755 QEA-----EKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSD----SA 805
Query: 310 GAALLT-LYA 318
LL+ +YA
Sbjct: 806 AYVLLSNIYA 815
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 36/329 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ++ L KQ+H ++ G + I +Y + A +F Q+ + +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++++ +R GL + + ++ G+ PD + VL+AC+ L
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V +++D+YSK G +E A +F D+ SWN+MM + + +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
A+ + M G + D +T + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + A KVF QI P+ ++WTT+ISG G +L + +M G V PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDE 601
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ ++ +C L AL GK+IH +K+
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANIMKL 630
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 11/325 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L + C S + ++ L Y + G F L+ IYA +R A LF ++P
Sbjct: 125 LSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL---LE 119
+V + ++ + G + + ++ G+ PD +L + LE
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE 244
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
D+ V N L Y + G+ A F +M + D ++ ++
Sbjct: 245 QVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVIL 304
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
S + ++ ++ G + V N+ ++ Y + G V+ A ++F Q+K+ ++I
Sbjct: 305 SVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLI 364
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALASGKEIHG 294
SW T+ISG + G SL +F +++ G++ PD ++ VL +C L + G+++H
Sbjct: 365 SWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
LK G + AL+ +Y++
Sbjct: 424 CALK--AGIVLDSFVSTALIDVYSK 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L++ACS +L Q KQ+H ++ PF T L+ +YA C ++ A+ LFR++
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++ ++HG A + + + EM+ +GV+PD F VL AC+ +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ + ++D S+ G ++ A +V M
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L Q KQ+H ++ H F + ++ +Y C +++SA +F Q+P P+ A+T++++
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+G Q + TY +MR GV PD Y F ++KAC+ L A LE
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMKLNCAF 634
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D V S++DMY+KCG++E A +F M R V WN+M+ +G ++ A+ M+
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRH 250
G PD VT V+ A GL S+A K F+ ++ +P + ++ L+ S G
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLV-SCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
+ E V M F + + L+ +CR G +G+ + + P + SA
Sbjct: 755 QEA-----EKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSD----SA 805
Query: 310 GAALLT-LYA 318
LL+ +YA
Sbjct: 806 AYVLLSNIYA 815
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 36/329 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ++ L KQ+H ++ G + I +Y + A +F Q+ + +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++++ +R GL + + ++ G+ PD + VL+AC+ L
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V +++D+YSK G +E A +F D+ SWN+MM + + +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
A+ + M G + D +T + ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + A KVF QI P+ ++WTT+ISG G +L + +M G V PD
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDE 601
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ ++ +C L AL GK+IH +K+
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANIMKL 630
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 11/325 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L + C S + ++ L Y + G F L+ IYA +R A LF ++P
Sbjct: 125 LSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL---LE 119
+V + ++ + G + + ++ G+ PD +L + LE
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELE 244
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
D+ V N L Y + G+ A F +M + D ++ ++
Sbjct: 245 QVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVIL 304
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
S + ++ ++ G + V N+ ++ Y + G V+ A ++F Q+K+ ++I
Sbjct: 305 SVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLI 364
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALASGKEIHG 294
SW T+ISG + G SL +F +++ G++ PD ++ VL +C L + G+++H
Sbjct: 365 SWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVGRQVHT 423
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
LK G + AL+ +Y++
Sbjct: 424 CALK--AGIVLDSFVSTALIDVYSK 446
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L++ACS +L Q KQ+H ++ PF T L+ +YA C ++ A+ LFR++
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++ ++HG A + + + EM+ +GV+PD F VL AC+ +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ + ++D S+ G ++ A +V M
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 42/352 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL+ AC+ +SL+ AK++H ++L +I +Y C ++ A +F + P
Sbjct: 70 SLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLP 129
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++TS+++ +S++G A I Y +M G PD F V+KAC +A ++
Sbjct: 130 NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKAC-YIAGDIDLGRQL 188
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L N+++ MY+ G +E A+ VF + +D+ SW +M++ Y+ G
Sbjct: 189 HAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYR 248
Query: 185 QRAVEVLESMRVDG-------------------------------CEPDVVTRN-----T 208
A+ + + G C + RN +
Sbjct: 249 VEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCS 308
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+ D Y + G + A F QIK+P+++SW +I+ ++ G ++ FR+M++ G+ P
Sbjct: 309 LCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLT-P 367
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
D+ +L +C L G++IH Y +KI EI + +LLT+Y +
Sbjct: 368 DSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEI---TVCNSLLTMYTK 416
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 38/325 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ ACS+ L KQ+H + G R F L +YA L SA F Q+ P
Sbjct: 273 SVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNP 332
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ +I+A + +G A + I+ + +M G++PD + +L C L
Sbjct: 333 DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGS-PVRLNQGRQI 391
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF-DEMRERDVFSWNSMMSCYVCNGL 183
++ VCNS+L MY+KC + A VF D R ++ SWN+++S +
Sbjct: 392 HSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQ 451
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVM--------------------------------- 210
+ + M G +PD +T T++
Sbjct: 452 EGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNG 511
Query: 211 --DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
D Y + G + A VF+ ++ +++SW++LI GY+ G +L +FR M N G V P
Sbjct: 512 LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG-VQP 570
Query: 269 DAGALSGVLVSCRCLGALASGKEIH 293
+ G L +C +G + G ++
Sbjct: 571 NEVTYLGALSACSHIGLVEEGWRLY 595
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 2/227 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
SLL C + LNQ +Q+H Y++ G ++ L+ +Y C L A ++FR + +
Sbjct: 374 SLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRN 433
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+ ++ +IL+ + + Y EM F G PD +L CA+L +L
Sbjct: 434 ANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSL-GVGNQ 492
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ VCN ++DMY+KCG ++ A VFD + D+ SW+S++ Y GL
Sbjct: 493 VHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGL 552
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
A+ + M G +P+ VT + A +GLV E ++++ ++
Sbjct: 553 GHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSME 599
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 155/352 (44%), Gaps = 41/352 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++AC + ++ +QLH +++ LI +Y + + A ++F ++P
Sbjct: 171 SVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTK 230
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGV-SPDGYVFPKVLKACAQLAALLEXXXX 123
++ ++ +++ + + G + + + ++ +G P+ ++F V AC+ L LE
Sbjct: 231 DLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLE-LEYGKQ 289
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
++ S+ DMY+K G + A F +++ D+ SWN++++ + NG
Sbjct: 290 VHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGD 349
Query: 184 SQRAVEVLESMRVDGCEPDVVTR-----------------------------------NT 208
+ A++ M G PD +T N+
Sbjct: 350 ANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNS 409
Query: 209 VMDAYCRMGLVSEASKVFEQI-KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++ Y + + +A VF I ++ N++SW ++S + G + +++EM G
Sbjct: 410 LLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNK- 468
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD+ ++ +L +C L +L G ++H Y +K G I S L+ +YA+
Sbjct: 469 PDSITITTLLGTCAELTSLGVGNQVHCYSIK--SGLILDVSVCNGLIDMYAK 518
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 45/356 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+A SKSL Q K LH ++ G + LI +Y C+ A ++F +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 63 QPNVFAF-TSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P + ++A ++R+ + + + + + M + + PD Y +P VLKAC L ++
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVV-L 124
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V +S++ MY+KC + E A ++FDEM ++DV WN+++SCY
Sbjct: 125 GQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQ 184
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNT-------------------------------- 208
+G + A+ MR G EPD VT T
Sbjct: 185 SGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFV 244
Query: 209 ---VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++D Y + G + A +VFEQ+ + V++W ++I+GY G + +F+ M ++G
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG- 303
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGL--KIMPGEIFYRSAGAALLTLYAR 319
V P L+ L++C L GK +HGY + +I P +IF S +L+ LY +
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP-DIFLNS---SLMDLYFK 355
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 48/357 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ + + +C+ L++ +++H ++ G F + L+ +Y C L A +F Q+P
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
V A+ S++ + G CI+ + M +GV P L AC+Q A LLE
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLE-GK 328
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + +S++D+Y KCG VE A +F M + SWN M+S YV G
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV--------------------------------- 209
A+ + M EPD +T +V
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D Y + G V EA VF+ + + +++SWT++I+ Y S GR +L +F EM+ V
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSN-VK 507
Query: 268 PDAGALSGVLVSCRCLGALASG-----KEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD +L +C G + G + I+ YG I+P Y + L+TL R
Sbjct: 508 PDRVTFLAILSACSHAGLVDDGLYHFNQMINVYG--IIPRIEHY----SCLITLLGR 558
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 9/289 (3%)
Query: 9 ACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFA 68
ACS S L + K +H Y++ + F + L+ +Y C + SA ++F+ +P+ +
Sbjct: 317 ACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVS 376
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
+ +++ + G + + EM V PD F VL AC+QLAA LE
Sbjct: 377 WNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAA-LEKGREIHNLI 435
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
+ V ++LDMY+KCG VE A VF + ERD+ SW SM++ Y +G A+
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 189 EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISG 243
E+ M +PD VT ++ A GLV + F Q+ + P + ++ LI+
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITL 555
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
GR + I + ++ + D LS + +CR L G EI
Sbjct: 556 LGRAGRLHEAYEILQ---SNPEISDDFQLLSTLFSACRLHKNLDLGVEI 601
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 45/356 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+A SKSL Q K LH ++ G + LI +Y C+ A ++F +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 63 QPNVFAF-TSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P + ++A ++R+ + + + + + M + + PD Y +P VLKAC L ++
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVV-L 124
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V +S++ MY+KC + E A ++FDEM ++DV WN+++SCY
Sbjct: 125 GQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQ 184
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNT-------------------------------- 208
+G + A+ MR G EPD VT T
Sbjct: 185 SGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFV 244
Query: 209 ---VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++D Y + G + A +VFEQ+ + V++W ++I+GY G + +F+ M ++G
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG- 303
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGL--KIMPGEIFYRSAGAALLTLYAR 319
V P L+ L++C L GK +HGY + +I P +IF S +L+ LY +
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP-DIFLNS---SLMDLYFK 355
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 48/357 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ + + +C+ L++ +++H ++ G F + L+ +Y C L A +F Q+P
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
V A+ S++ + G CI+ + M +GV P L AC+Q A LLE
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLE-GK 328
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + +S++D+Y KCG VE A +F M + SWN M+S YV G
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV--------------------------------- 209
A+ + M EPD +T +V
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D Y + G V EA VF+ + + +++SWT++I+ Y S GR +L +F EM+ V
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSN-VK 507
Query: 268 PDAGALSGVLVSCRCLGALASG-----KEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD +L +C G + G + I+ YG I+P Y + L+TL R
Sbjct: 508 PDRVTFLAILSACSHAGLVDDGLYHFNQMINVYG--IIPRIEHY----SCLITLLGR 558
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 9/289 (3%)
Query: 9 ACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFA 68
ACS S L + K +H Y++ + F + L+ +Y C + SA ++F+ +P+ +
Sbjct: 317 ACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVS 376
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
+ +++ + G + + EM V PD F VL AC+QLAA LE
Sbjct: 377 WNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAA-LEKGREIHNLI 435
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
+ V ++LDMY+KCG VE A VF + ERD+ SW SM++ Y +G A+
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 189 EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISG 243
E+ M +PD VT ++ A GLV + F Q+ + P + ++ LI+
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITL 555
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
GR + I + ++ + D LS + +CR L G EI
Sbjct: 556 LGRAGRLHEAYEILQ---SNPEISDDFQLLSTLFSACRLHKNLDLGVEI 601
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 35/343 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL++C K+ + Q+ ++ HG F I + + A LF ++PQP
Sbjct: 17 TLLRSC---KNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQP 73
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N + ++ + ++G R + + E+ P+ + FP ++K+C +L + E
Sbjct: 74 NTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVH 133
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG-- 182
V S++DMYSK G VE A +VF EM ER+V W ++++ Y+ G
Sbjct: 134 CCATKHGFKSNSF-VATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDV 192
Query: 183 --------LSQRAVEVLESMRVDGC-----------------EPDVVTRNTVMDAYCRMG 217
L+ V+ S+ + G D ++ N +++ Y G
Sbjct: 193 VSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNG 252
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
V KVF+++ + NV SW LI GY G +L F+ M+ +G V P+ L VL
Sbjct: 253 EVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVL 312
Query: 278 VSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+C LGAL GK +H Y I G +F G L+ +YA+
Sbjct: 313 SACSRLGALDMGKWVHVYAESIGYKGNLF---VGNVLIDMYAK 352
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 138/282 (48%), Gaps = 15/282 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ SK++ A++L M +R ++ YA ++ +F ++P+ N
Sbjct: 213 LISGYIESKNMAAARELFDKM----PNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERN 268
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
VF++ ++ + ++GL + +E++ M +G V P+ + VL AC++L AL +
Sbjct: 269 VFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGAL-DMGKWV 327
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+L V N ++DMY+KCG +E A VF+ + +D+ SWN++++ +G +
Sbjct: 328 HVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHA 387
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
A+ + + M+ +G EPD VT ++ A MGLV + F+ + D P + +
Sbjct: 388 PDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGC 447
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
++ G +L R+M + PDA + +L +CR
Sbjct: 448 MVDLLGRAGLLDQALNFIRKMP----IEPDAVIWAALLGACR 485
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L ACS +L+ K +H Y G F LI +YA C + +A +F L
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD 367
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ ++ +I+ + HG A + + M+ +G PDG F +L AC + + +
Sbjct: 368 RKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFL 427
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
+ ++D+ + G ++ A +M E D W +++ C
Sbjct: 428 YFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGA--CR 485
Query: 182 GLSQRAVEVLESMRVDGCEPD 202
+ L R+ EP+
Sbjct: 486 LYKNVEIAELALQRLIELEPN 506
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 42/350 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ACS + LH ++++G + + LI Y A +F +P+
Sbjct: 74 SLLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPER 133
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV +T+++ +S+ G R+ + +MR++G+ P +L +++ +
Sbjct: 134 NVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYV----QCL 189
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL + NS++++Y KCG +E ++F+ M RDV SWNS++S Y G
Sbjct: 190 HGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDL 249
Query: 185 QRAVEVLESMRVDGCEP--------------------------DVVTRNTVMDA------ 212
+ +L+ M++ G EP ++ V+DA
Sbjct: 250 CEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSF 309
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y + G ++ A K+FE+ D +V+ WT +ISG +L +F +M GM P
Sbjct: 310 IVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMK-PS 368
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ V+ +C LGA GK IHGY L+ +A +L+T+YA+
Sbjct: 369 TETMASVITACAQLGAFNLGKSIHGYILRQKLS--LDTAAHNSLVTMYAK 416
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 39/275 (14%)
Query: 61 LPQP-----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
LP P ++ +++ HS G RQ + TY M + D Y FP +LKAC+ L
Sbjct: 24 LPHPPSSSATTHSYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFL- 82
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
L D + +S+++ Y K G + A +VFD M ER+V W +++
Sbjct: 83 NLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVI 142
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVT------------------------------ 205
CY G + A + MR +G +P VT
Sbjct: 143 GCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDL 202
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N++++ Y + G + + K+FE + +V+SW +L+S Y+ +G L + + M
Sbjct: 203 NLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQ 262
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G+ P A VL G + G+ +HG L+
Sbjct: 263 GLE-PGLQAFGSVLSVAVSTGDMRLGRLVHGQILR 296
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 37/324 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L ++ + + +H +L G T I +Y ++ A +F +
Sbjct: 273 SVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDK 332
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +T++++ ++ A + + + +M G+ P V+ ACAQL A
Sbjct: 333 DVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAF-NLGKSI 391
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D NS++ MY+KCG ++ + VFD M +RD+ SWN++++ Y NG
Sbjct: 392 HGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCV 451
Query: 185 QRAVEVLESMR--------------VDGC---------------------EPDVVTRNTV 209
+A + MR V GC P ++ ++
Sbjct: 452 YKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSL 511
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D YC+ G + A + F + +++SW+ +I+GY G+ +L ++ + + + + P+
Sbjct: 512 VDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFL-ETRIKPN 570
Query: 270 AGALSGVLVSCRCLGALASGKEIH 293
+L SC G + G I+
Sbjct: 571 HVIFLSILSSCSHNGLIDQGLNIY 594
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ AC+ + N K +H Y+L L+ +YA C L ++ +F ++ +
Sbjct: 374 SVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKR 433
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ +I+A ++++G + + EMR +PD +++ CA L
Sbjct: 434 DLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQL-----HP 488
Query: 125 XXXXXXXXXXXDLRVC----NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
LR C S++DMY KCGD++ A R F+ M +D+ SW+++++ Y
Sbjct: 489 GKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGY 548
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVI 235
+G + A+ + +P+ V +++ + GL+ + ++E + PN+
Sbjct: 549 HGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLE 608
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
++ G+ + +++ M +D P L +L +CR G G I
Sbjct: 609 HHACMVDLLCRAGKVEEAYNLYKRMFSD----PVLDVLGIILDACRANGNKELGDIIAND 664
Query: 296 GLKIMP 301
+K+ P
Sbjct: 665 IIKLRP 670
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 126/312 (40%), Gaps = 37/312 (11%)
Query: 22 LHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGL 81
LH + +G ++ +Y C + LF + + +V ++ S+L+ +++ G
Sbjct: 189 LHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGD 248
Query: 82 ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCN 141
+ + M+ +G+ P F VL + D +
Sbjct: 249 LCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDM-RLGRLVHGQILRGGFVLDAHIET 307
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
S + MY K G++ A ++F+ ++DV W +M+S V N + +A+ V + M G +P
Sbjct: 308 SFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKP 367
Query: 202 -----------------------------------DVVTRNTVMDAYCRMGLVSEASKVF 226
D N+++ Y + G + ++ VF
Sbjct: 368 STETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVF 427
Query: 227 EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+++ +++SW +++GY+ G + +F EM + PD+ + ++ C G L
Sbjct: 428 DRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQT-PDSITIVSLVQGCASTGQL 486
Query: 287 ASGKEIHGYGLK 298
GK IHG+ ++
Sbjct: 487 HPGKWIHGFVIR 498
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 11/284 (3%)
Query: 19 AKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+Q+H Y + G H + +T LI+ Y AH+LF ++PQPNV ++ ++++ +
Sbjct: 24 GQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYV 83
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
G ++ + + ++ + D + F + ACAQL+ LL+ +
Sbjct: 84 HAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLS-LLKLGSSIHSKTVKLGMDNNT 142
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
V N ++DMY KCG VE A R+F ++ ++DV SWNS+++ NG + L+ M
Sbjct: 143 VVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMP-- 200
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
PDVV+ N +++ + G + +A ++ + PN SW ++I+G+ + R +L +F
Sbjct: 201 --NPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMF 258
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH----GYGL 297
+M + D S +L L AL G IH YGL
Sbjct: 259 GKMHLKNLQI-DEFTFSIILNGIASLSALTWGMLIHCCTIKYGL 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI A + A + +P PN ++ S++ + +E + +M K + D
Sbjct: 210 LINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQID 269
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ F +L A L+AL + V +S++DMYSKCG V A +F
Sbjct: 270 EFTFSIILNGIASLSAL-TWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIF 328
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD-GCEPDVVTRNTVMDA 212
+ + R++ SWN+M+ Y NG S +A+ + E ++++ +PD +T V+ A
Sbjct: 329 NVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITFLNVISA 381
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ LL C+ KSL+Q KQ+H +++ G H+ P +KLI YA D L A +
Sbjct: 95 IKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSN 154
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +++ + ++ L I Y M KGV PD Y +P VLKAC +L +
Sbjct: 155 SFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDY-DSGV 213
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L V N+++ MY + G +E A +FD M RD SWN+M+SCY G
Sbjct: 214 AVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRG 273
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L A + MR G E +++ NT+ G A K+F Q++
Sbjct: 274 LWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR------------ 321
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
++ D+ A+ L +C +GA+ GKEIHG+ ++
Sbjct: 322 ---------------------AVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFD 360
Query: 303 EIFYRSAGAALLTLYAR 319
+ + L+T+Y+R
Sbjct: 361 --VFDNVKNTLITMYSR 375
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 138/301 (45%), Gaps = 10/301 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L ACS ++ K++H + + LI +Y+ C DL A+ LFR++ + +
Sbjct: 335 LNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGL 394
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ ++L+ + + + EM +GV P+ +L CA++A L
Sbjct: 395 ITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCY 454
Query: 127 XXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
L + NS+++MYS+ G V A +VFD + +D ++ SM+ Y +G +
Sbjct: 455 MVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGE 514
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVISWTTL 240
A+++ MR +PD VT V+ A GLV++ +F ++ DP V ++ +
Sbjct: 515 TALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCM 574
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ + GR G+ L +E++ P + + ++ +C+ G G+ G L++
Sbjct: 575 VDLF---GRAGL-LDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMK 630
Query: 301 P 301
P
Sbjct: 631 P 631
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 147/312 (47%), Gaps = 36/312 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L C ++ + +++H +M+ F T+LI +Y CD L AH++F ++P+
Sbjct: 44 NAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPE 103
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++T++++ +S+ G A Q + + +M G P+ + F VL +C +
Sbjct: 104 RNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFI-LGRQ 162
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ V +S+LDMY+K G + A VF+ + ERDV S +++S Y GL
Sbjct: 163 IHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGL 222
Query: 184 SQRAVEVLESMRVDGCEPDVVT-----------------------------------RNT 208
+ A+E+ ++ +G + + VT +N+
Sbjct: 223 DEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNS 282
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G ++ + ++F+ + + VISW ++ GYS G L +F M + V P
Sbjct: 283 LIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKP 342
Query: 269 DAGALSGVLVSC 280
D+ + VL C
Sbjct: 343 DSVTILAVLSGC 354
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 143/305 (46%), Gaps = 12/305 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L +C++S +Q+H ++ F + L+ +YA + A ++F LP+
Sbjct: 146 TVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPER 205
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + T+I++ +++ GL + +E + ++ +G+ + + VL A + LAAL +
Sbjct: 206 DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAAL-DLGKQV 264
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + NS++DMYSKCG++ + R+FD M ER V SWN+M+ Y +G
Sbjct: 265 HNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 324
Query: 185 QRAVEVLESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK------DPNVISW 237
+ +++ MR + +PD VT V+ GL + +F + +P + +
Sbjct: 325 REVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHY 384
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ GR + ++M + P A +L +CR + G+ L
Sbjct: 385 GCVVDLLGRSGRVEEAFEFIKKMPFE----PTAAIWGSLLGACRVHSNVDIGEFAGQQLL 440
Query: 298 KIMPG 302
+I PG
Sbjct: 441 EIEPG 445
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
P V R ++ Y + + +A VF+++ + NV+SWT +IS YS G +L +F +M
Sbjct: 73 PSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQM 132
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ G P+ + VL SC G++IH +K+ + + G++LL +YA+
Sbjct: 133 LRSGTE-PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVF--VGSSLLDMYAK 188
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 49/330 (14%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+++CS+ L KQ+H + G F + LI +Y+ C L A LF ++P+ NV
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 67 FAFTSILAFHSRHGLARQCI----------ET-YAEMRFKGVSPDGYVFPKVLKACAQLA 115
++TS+++ + ++ AR+ + ET Y E+ GV D + V+ ACA++
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ L V N+++D Y+KCG++ + +VFD M E DV SWNS++
Sbjct: 213 -VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 176 SCYVCNGLSQRAVEVLESM--------------------------RVDGC---------- 199
+ Y NGLS A + M ++ C
Sbjct: 272 AVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL 331
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
E ++V +++D YC+ G V A K F+++K NV SWT +++GY G ++ +F E
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M+ G + P+ VL +C G L G
Sbjct: 392 MIRCG-IKPNYITFVSVLAACSHAGLLKEG 420
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 48/291 (16%)
Query: 56 SLF-RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
S+F + + + +V+++ SI+A +R G + Q + ++ MR + P+ FP +K+C+ L
Sbjct: 40 SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
L D+ V ++++DMYSKCG + A ++FDE+ ER+V SW SM
Sbjct: 100 YDLC-AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 175 MSCYVCNGLSQRAVEVL-ESMRVD-------------------GCEPDVVTR-------- 206
+S YV N ++ AV + E + VD GC R
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 207 ------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
NT+MDAY + G +S + KVF+ +++ +V SW +LI+ Y+ G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ +F +MV G V +A LS VL++C GAL GK IH +K+
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM 329
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSP 99
L+ YA C ++ + +F + + +V ++ S++A ++++GL+ + +++M +G V
Sbjct: 239 LMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRY 298
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ VL ACA AL + +L V S++DMY KCG VE A +
Sbjct: 299 NAVTLSAVLLACAHSGAL-QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKA 357
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
FD ++ ++V SW M++ Y +G + A++V M G +P+ +T +V+ A GL+
Sbjct: 358 FDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLL 417
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E F ++K +P + ++ ++ G + G+ +EM V PD
Sbjct: 418 KEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM----KVKPDFIVWG 473
Query: 275 GVLVSCR 281
+L +CR
Sbjct: 474 SLLGACR 480
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++L AC+ S +L K +H ++ T ++ +Y C + A F +L
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV ++T ++A + HG ++ ++ + EM G+ P+ F VL AC+ L E
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH 422
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYVC 180
+ + ++D+ + G ++ A + EM+ + D W S++ +C +
Sbjct: 423 WFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
Query: 181 NGLSQRAVEVLESMRVD--GCEPDVVTRNTVMDA 212
+ + + ++D C V+ N DA
Sbjct: 483 KNVELGEISARKLFKLDPSNCGYYVLLSNIYADA 516
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 49/330 (14%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+++CS+ L KQ+H + G F + LI +Y+ C L A LF ++P+ NV
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 67 FAFTSILAFHSRHGLARQCI----------ET-YAEMRFKGVSPDGYVFPKVLKACAQLA 115
++TS+++ + ++ AR+ + ET Y E+ GV D + V+ ACA++
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ L V N+++D Y+KCG++ + +VFD M E DV SWNS++
Sbjct: 213 -VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 176 SCYVCNGLSQRAVEVLESM--------------------------RVDGC---------- 199
+ Y NGLS A + M ++ C
Sbjct: 272 AVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL 331
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
E ++V +++D YC+ G V A K F+++K NV SWT +++GY G ++ +F E
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M+ G + P+ VL +C G L G
Sbjct: 392 MIRCG-IKPNYITFVSVLAACSHAGLLKEG 420
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 48/291 (16%)
Query: 56 SLF-RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
S+F + + + +V+++ SI+A +R G + Q + ++ MR + P+ FP +K+C+ L
Sbjct: 40 SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
L D+ V ++++DMYSKCG + A ++FDE+ ER+V SW SM
Sbjct: 100 YDLC-AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 175 MSCYVCNGLSQRAVEVL-ESMRVD-------------------GCEPDVVTR-------- 206
+S YV N ++ AV + E + VD GC R
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 207 ------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
NT+MDAY + G +S + KVF+ +++ +V SW +LI+ Y+ G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ +F +MV G V +A LS VL++C GAL GK IH +K+
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM 329
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSP 99
L+ YA C ++ + +F + + +V ++ S++A ++++GL+ + +++M +G V
Sbjct: 239 LMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRY 298
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ VL ACA AL + +L V S++DMY KCG VE A +
Sbjct: 299 NAVTLSAVLLACAHSGAL-QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKA 357
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
FD ++ ++V SW M++ Y +G + A++V M G +P+ +T +V+ A GL+
Sbjct: 358 FDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLL 417
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E F ++K +P + ++ ++ G + G+ +EM V PD
Sbjct: 418 KEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEM----KVKPDFIVWG 473
Query: 275 GVLVSCR 281
+L +CR
Sbjct: 474 SLLGACR 480
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++L AC+ S +L K +H ++ T ++ +Y C + A F +L
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV ++T ++A + HG ++ ++ + EM G+ P+ F VL AC+ L E
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH 422
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYVC 180
+ + ++D+ + G ++ A + EM+ + D W S++ +C +
Sbjct: 423 WFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
Query: 181 NGLSQRAVEVLESMRVD--GCEPDVVTRNTVMDA 212
+ + + ++D C V+ N DA
Sbjct: 483 KNVELGEISARKLFKLDPSNCGYYVLLSNIYADA 516
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 41/332 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+A + S L+ K +H + G + + L +Y+ C LF ++ P+V
Sbjct: 259 LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDV 318
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++T+++ + + G + ++ + MR VSP+ Y F V+ ACA LA + +
Sbjct: 319 VSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLA-ITKWGEQIHG 377
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
L V NS++ +YSKCG ++ A+ VFD M +D+ SW++++S Y ++
Sbjct: 378 HALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKE 437
Query: 187 AVEVLESMRVDGCEP-----------------------------------DVVTRNTVMD 211
A L M +G +P + + + ++
Sbjct: 438 AFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALIS 497
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y R G + EASK+F+ IK+ +++SWT +I+GY+ G ++ +F + + G++ PD
Sbjct: 498 MYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLM-PDYV 556
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
G+L +C G + ++ Y K+M E
Sbjct: 557 TFIGILTACNHAGLV----DLGFYYYKLMTNE 584
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 147/349 (42%), Gaps = 41/349 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC+ ++ + LH + + G F ++ L+ +Y S+F + NV
Sbjct: 158 LKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNV 217
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++T+++ G + + ++EM V D + F LKA A+ + LL
Sbjct: 218 VSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAE-SGLLHYGKAIHA 276
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
V N++ MYSKC + R+F +M DV SW +++ YV G +R
Sbjct: 277 QTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEER 336
Query: 187 AVEVLESMRVDGCEPDVVT-----------------------------------RNTVMD 211
A++ + MR P+ T N+++
Sbjct: 337 ALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIIT 396
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + GL+ EAS VF+ + ++ISW+T+IS Y + M +G P+
Sbjct: 397 LYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPK-PNEF 455
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
AL+ VL C + L GK++H Y L I + E S AL+++Y+R
Sbjct: 456 ALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHS---ALISMYSR 501
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ AC+ +Q+H + L G + +I +Y+ C L+ A +F + +
Sbjct: 358 SVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRK 417
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++++I++ + + A++ + M +G P+ + VL C +A LLE
Sbjct: 418 DIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMA-LLEPGKQV 476
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++++ MYS+ G+++ A+++FD ++ D+ SW +M++ Y +G S
Sbjct: 477 HAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYS 536
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
Q A+ + E++ G PD VT ++ A GLV
Sbjct: 537 QEAISLFENISSVGLMPDYVTFIGILTACNHAGLV 571
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L C + L KQ+H Y L G + + LI +Y+ +L+ A +F +
Sbjct: 457 LASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIK 516
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
++ ++T+++ ++ HG +++ I + + G+ PD F +L AC
Sbjct: 517 NNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTAC 565
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 149/322 (46%), Gaps = 41/322 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLI-QIYADCDDLRSAHSLFRQLP 62
+LLQ C++SK + KQ+H + + H P LI I + + AH++F L
Sbjct: 44 ALLQNCASSK--QKLKQIHAFSIRHNVPLNNPDIGKYLIFTIVSLSAPMSYAHNVFTLLY 101
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PNVF + +++ ++ + + Y +M V PD + +P +LKA ++ + +
Sbjct: 102 NPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEM 161
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS+L +Y+ CGD E A +VF+ M ERD+ +WNS+++ + NG
Sbjct: 162 IHSVTVRNGFESL-IFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNG 220
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
A+ + M + G EPD T N
Sbjct: 221 KPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNN 280
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++D Y + G + EA +VF ++ + NV+SWT+L+ G + G +LG+F+EM +V
Sbjct: 281 SLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIV- 339
Query: 268 PDAGALSGVLVSCRCLGALASG 289
P GVL +C G L G
Sbjct: 340 PREITFVGVLYACSHCGMLDEG 361
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 140/301 (46%), Gaps = 10/301 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+A S S ++ + +H + +G F L+ IYA C D SA+ +F + + +
Sbjct: 146 LLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERD 205
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ A+ S++ + +G + + + EM KGV PDG+ + ACA+L A LE
Sbjct: 206 LVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGA-LELGRRVH 264
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L V NS+LD Y+KCG + A +VF EM ER+V SW S++ NG +
Sbjct: 265 VYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGE 324
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTL 240
A+ + + M P +T V+ A G++ E F ++K+ P + + +
Sbjct: 325 EALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCM 384
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ S G + E + + P+A +L +C G L+ G+ + LK+
Sbjct: 385 VDLLSRAGLVKRAY----EYIQSMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKLE 440
Query: 301 P 301
P
Sbjct: 441 P 441
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 2/182 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL AC+ +L +++H Y+L G L+ YA C +R A +F ++ +
Sbjct: 246 SLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSER 305
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++TS++ + +G + + + EM + + P F VL AC+ L E
Sbjct: 306 NVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYF 365
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMM-SCYVCNG 182
+ ++D+ S+ G V+ A M + + W +++ +C V
Sbjct: 366 RRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHGD 425
Query: 183 LS 184
LS
Sbjct: 426 LS 427
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 37/323 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++AC ++ K +H G H F + LI++Y D + A LF +LP +
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRD 242
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +L + ++G + T+ EMR V P+ F +L CA ++
Sbjct: 243 CILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCAT-RGIVRAGIQLH 301
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V N+++ MYSKCG++ A ++FD M + D +WN +++ YV NG +
Sbjct: 302 GLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTD 361
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------------RNTVM 210
AV + ++M G + D +T ++ ++
Sbjct: 362 EAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALV 421
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G V A K F+Q +V T +ISGY G + +L +FR ++ +GMV P+
Sbjct: 422 DIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMV-PNC 480
Query: 271 GALSGVLVSCRCLGALASGKEIH 293
++ VL +C L +L GKE+H
Sbjct: 481 LTMASVLPACAALASLKLGKELH 503
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 141/334 (42%), Gaps = 38/334 (11%)
Query: 12 ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
AS Q +Q+H +L+ G + ++++ +Y C + +LF +L +
Sbjct: 88 ASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNW 147
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ S G + + M V+PD Y FP V+KAC L +
Sbjct: 148 LIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNN-VPLCKMVHELARSM 206
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
DL + +S++ +Y+ G + A +FDE+ RD WN M++ YV NG A+
Sbjct: 207 GFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTF 266
Query: 192 ESMR-----------------------------------VDGCEPDVVTRNTVMDAYCRM 216
+ MR G E D NT++ Y +
Sbjct: 267 QEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC 326
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
G + +A K+F+ + + ++W LI+GY G ++ +F+ MV G+ D+ +
Sbjct: 327 GNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKL-DSITFASF 385
Query: 277 LVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSA 309
L S G+L KE+H Y ++ +P +++ +SA
Sbjct: 386 LPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSA 419
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 10/295 (3%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ + S+L AC+A SL K+LH +L G + + +YA L A+ FR+
Sbjct: 481 LTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRR 540
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P + + ++ S++G I+ + +M G D L ACA AL
Sbjct: 541 MPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALY-Y 599
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D V ++++DMYSKCG + A VFD M ++ SWNS+++ Y
Sbjct: 600 GKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGN 659
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI----- 235
+G + +++ M G +PD VT +M A GLV E F + + I
Sbjct: 660 HGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARME 719
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ ++ Y GR + + M PDAG +L +CR G + K
Sbjct: 720 HFACMVDLYGRAGRLHEAFDTIKSMP----FTPDAGTWGSLLGACRLHGNVELAK 770
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 37/320 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L + S SL K++H Y++ HG + + L+ IY D+ A F+Q
Sbjct: 384 SFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLV 443
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V T++++ + +GL + + + + +G+ P+ VL ACA LA+ L+
Sbjct: 444 DVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALAS-LKLGKEL 502
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+V +S+ MY+K G ++ A + F M +D WN M+ + NG
Sbjct: 503 HCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKP 562
Query: 185 QRAVEVLESMRVDGCEPD-------------------------VVTRN----------TV 209
+ A+++ M G + D V RN T+
Sbjct: 563 ELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTL 622
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G ++ A VF+ + N +SW ++I+ Y + GR L +F EMV G + PD
Sbjct: 623 IDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAG-IQPD 681
Query: 270 AGALSGVLVSCRCLGALASG 289
++ +C G + G
Sbjct: 682 HVTFLVIMSACGHAGLVDEG 701
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 180 CNGLSQRAV--EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
C GL+ + V E R G D+ ++++ Y G + +A +F+++ + I W
Sbjct: 187 CGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILW 246
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
+++GY G +LG F+EM N V P++ + +L C G + +G ++H GL
Sbjct: 247 NVMLNGYVKNGDFNSALGTFQEMRNS-CVKPNSVSFVCLLSVCATRGIVRAGIQLH--GL 303
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
I G + ++T+Y++
Sbjct: 304 VIRSGFESDPTVANTIITMYSK 325
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQI--YADCDDLRSAHSLFRQLP 62
+LL+AC K + +Q+H ++ G + F + I + L + ++F ++
Sbjct: 20 TLLKAC---KRIQHLQQVHASIIQRGLEQDQFLISNFISLANTLSISTLSYSTAVFNRVL 76
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P+ F + + + H + I + M+ +G PD Y +P V+KAC+ +L
Sbjct: 77 NPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVL-VGK 135
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL V +++DMY KCG++ A +VFDE+ +R+V SW +M+ YV G
Sbjct: 136 SVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAG 195
Query: 183 LSQRAVEVLESMRVDGC---------------------------EPDVVTRNTVMDAYCR 215
A +V + M + E +VV+ T++D Y +
Sbjct: 196 DVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAK 255
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G + + +FEQ + +V++W+ LISGY G +L +F EM V PD L
Sbjct: 256 AGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEM-ESMKVIPDEFVLVS 314
Query: 276 VLVSCRCLGALASGKEIHGY 295
++ + LG L + + Y
Sbjct: 315 LMSAASQLGDLKLAQRVDSY 334
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 3/265 (1%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I YA D+ S+ LF Q + +V A++++++ + ++G A + ++ + EM V
Sbjct: 247 TTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVI 306
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD +V ++ A +QL L V ++++DM +KCG++E A +
Sbjct: 307 PDEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALK 366
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
+F EM +RD+ S+ SM+ + +G + AV + M ++G PD V+ A GL
Sbjct: 367 LFREMPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGL 426
Query: 219 VSEASKVFEQIKDPNVISWTT--LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
V + K F +++ IS T +GR G L E++ + P+AGA +
Sbjct: 427 VDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSG-QLRDAYELIKSMHIEPNAGAWGAL 485
Query: 277 LVSCRCLGALASGKEIHGYGLKIMP 301
+ +C+ G G+ + ++ P
Sbjct: 486 IGACKLHGDTELGEIVANRLFELEP 510
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L SL+ A S L A+++ Y+ ++ + + L+ + A C ++ A LFR++
Sbjct: 312 LVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREM 371
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
P+ ++ ++ S++ S HG + + M +G+ PD F VL AC+
Sbjct: 372 PKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSH 423
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 143/330 (43%), Gaps = 40/330 (12%)
Query: 7 LQACSASKSLNQAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ C++ K+L Q +QLH H++ F TK + +Y C A +F ++ +
Sbjct: 53 LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+F + +++ G + IE Y EMR GVS D + FP VLKAC
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE-RRLGCEIH 171
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE--MRERDVFSWNSMMSCYVCNGL 183
+ VCN+++ MY+KCGD+ GA +FD M + D SWNS++S +V G
Sbjct: 172 GVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE 231
Query: 184 SQRAVEVLESMRVDGCE-----------------------------------PDVVTRNT 208
S A+ + M+ G E DV N
Sbjct: 232 SLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNA 291
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y G + +A +VF+ + + +SW TL+SG + ++ F++M + G
Sbjct: 292 LIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPD 351
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK 298
L+ + S R LA G E+H Y +K
Sbjct: 352 QVSVLNMIAASGRSANLLA-GMEVHAYAIK 380
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 156/356 (43%), Gaps = 44/356 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ--LPQ 63
+L+AC A K ++H + G F LI +YA C DL A LF + +
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ SI++ H G + + + + M+ GV + Y F L+AC + ++
Sbjct: 214 DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC-EGPTFIKIGRG 272
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V N+++ MY+ CG +E A RVF M +D SWN+++S V N +
Sbjct: 273 IHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDM 332
Query: 184 SQRAVEVLESMRVDGCEPDVVT-----------------------------------RNT 208
A+ + M+ G +PD V+ N+
Sbjct: 333 YSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNS 392
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + V FE + + ++ISWTT+I+GY+ H +L + R++ + M
Sbjct: 393 LIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV- 451
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA-----GAALLTLYAR 319
D + +L++C L + KEIHGY LK +I ++A G L YAR
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYAR 507
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 152/349 (43%), Gaps = 38/349 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S LQAC + + +H +L + + LI +YA+C + A +F+ +
Sbjct: 256 SALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFK 315
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++L+ ++ + I + +M+ G PD ++ A + A LL
Sbjct: 316 DCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLL-AGMEV 374
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY------ 178
++ + NS++DMY KC V+ F+ M E+D+ SW ++++ Y
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH 434
Query: 179 ---------------------------VCNGL-SQRAVEVLESMRVDGCEPDVVTRNTVM 210
C+GL S++ ++ + + G D++ +N ++
Sbjct: 435 LDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIV 494
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ Y + LV A VFE I +++SWT++I+ G +L +F ++ + PD
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETN-IEPDL 553
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L VL + L +L GKEIHG+ ++ G +L+ +YAR
Sbjct: 554 ITLVSVLYAAAALSSLKKGKEIHGFLIR--KGFFLEGLIANSLVDMYAR 600
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 8/296 (2%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M + S+L ACS KS K++H Y +L G ++ +Y + + A +F
Sbjct: 454 MMIGSILLACSGLKSEKLIKEIHGY-VLKGGLADILIQNAIVNVYGELALVDYARHVFES 512
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ ++ ++TS++ +GLA + +E + + + PD VL A A L++L +
Sbjct: 513 INSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKG 572
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
L + NS++DMY++CG +E A +F+ +++RD+ W SM++
Sbjct: 573 KEIHGFLIRKGFFLEGL-IANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGM 631
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS-WTT 239
+G + A+++ M + PD +T ++ A GLV E + FE +K+ + W
Sbjct: 632 HGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPE 691
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALASGK 290
+ + SL V + + P A +L +CR LG +A+ K
Sbjct: 692 HYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKK 747
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 98/258 (37%), Gaps = 40/258 (15%)
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P + + L+ CA AL + + + + MY KCG A +
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA------ 212
VFD+M ER +F+WN+M+ V G A+E+ + MRV G D T V+ A
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 213 -----------------------------YCRMGLVSEASKVFEQ--IKDPNVISWTTLI 241
Y + G + A +F+ ++ + +SW ++I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
S + G +L +FR M G V + L +C + G+ IH LK
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVG-VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNH 282
Query: 302 GEIFYRSAGAALLTLYAR 319
Y S AL+ +YA
Sbjct: 283 FTDVYVS--NALIAMYAN 298
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQAC++S SL+ KQ+H +L G + F + ++ +YA C ++ ++ LF +LP
Sbjct: 343 SVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR 402
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N + +I+ + + G + + + M + P + VL+A A LAAL E
Sbjct: 403 NDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL-EPGLQI 461
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D V NS++DMY+KCG + A FD+M +RD SWN+M+ Y +G+S
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMS 521
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KD----PNVISWTT 239
A+ + + M+ C+P+ +T V+ A GL+ + FE + KD P + +T
Sbjct: 522 MEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTC 581
Query: 240 LISGYSSVGRHGVSLGIFREM 260
++ +GR ++ + E+
Sbjct: 582 MVWLLGRLGRFDEAMKLIGEI 602
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 149/319 (46%), Gaps = 37/319 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C ++ N K +H L F L+++YA ++ A LF ++P+ ++
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDL 303
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ ++A +++ +++ ++ + MR V P+ + F VL+ACA + L+
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS-SVSLDLGKQIHS 362
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ V N+++D+Y+KCG++E + ++F+E+ +R+ +WN+++ YV G +R
Sbjct: 363 CVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGER 422
Query: 187 AVEVLESMRVDGCEP-----------------------------------DVVTRNTVMD 211
A+ + M +P D V N+++D
Sbjct: 423 AMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLID 482
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G +++A F+++ + +SW +I GYS G +L +F +M+ P+
Sbjct: 483 MYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF-DMMQHTDCKPNKL 541
Query: 272 ALSGVLVSCRCLGALASGK 290
GVL +C G L G+
Sbjct: 542 TFVGVLSACSNAGLLYKGQ 560
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 39/325 (12%)
Query: 30 GSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETY 89
G H F T LI Y+ ++ A +F + ++ ++T ++A ++ + + ++ +
Sbjct: 166 GHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLF 225
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
+MR G P+ + LK+C L A DL V ++L++Y+K
Sbjct: 226 NQMRIMGYKPNNFTISGALKSCLGLEA-FNVGKSVHGCALKGCYDHDLFVGIALLELYAK 284
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP-------- 201
G++ A R+F+EM + D+ W+ M++ Y + S+ A+++ MR P
Sbjct: 285 SGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASV 344
Query: 202 ---------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+V N +MD Y + G + + K+FE++ D N
Sbjct: 345 LQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND 404
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
++W T+I GY +G ++ +F M+ M P S VL + L AL G +IH
Sbjct: 405 VTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQ-PTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
+K M + +L+ +YA+
Sbjct: 464 LTIKTMYNKD--TVVANSLIDMYAK 486
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 41/337 (12%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
K LH ++L G+ F L+ Y + L+ A LF ++PQ N +F ++ +SR
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
Q + + +G + +VF +LK + L D
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMD-LAHLCWTLHACVYKLGHHADAF 172
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V +++D YS G+V+ A VFD++ +D+ SW M++CY N + ++++ MR+ G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 199 CEP-----------------------------------DVVTRNTVMDAYCRMGLVSEAS 223
+P D+ +++ Y + G + +A
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
++FE++ ++I W+ +I+ Y+ R +L +F M +V P+ + VL +C
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVV-PNNFTFASVLQACASS 351
Query: 284 GALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+L GK+IH LK + +F A++ +YA+
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVF---VSNAIMDVYAK 385
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 151/350 (43%), Gaps = 39/350 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC++ +L KQ H Y + G L+ +Y C D+++AH F
Sbjct: 390 SLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETE 449
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV + +L + + + + + +M+ +G+ P+ + +P +LK C L A +
Sbjct: 450 NVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA-TDLGEQI 508
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ V + ++DMY+K G ++ A ++F ++E DV SW +M++ Y +
Sbjct: 509 HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKF 568
Query: 185 QRAVEVLESMRVDGCEPDVV-----------------------------------TRNTV 209
A+ + + M+ G + D + N +
Sbjct: 569 TEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNAL 628
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ Y R G V EA F+QI + +SW +L+SG++ G +L IF +M G+ +
Sbjct: 629 VSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI-N 687
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + + + + GK+IHG K G AL+TLYA+
Sbjct: 688 SFTFGSAVSAAANIANVRIGKQIHGMIRK--TGYDSETEVSNALITLYAK 735
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 39/352 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+L AC+ + KQLH +L G + + L+ +Y+ +L SA +F +
Sbjct: 287 FSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 346
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q + ++ S+++ ++ G + + + +M PD +L ACA + A L
Sbjct: 347 QRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA-LPNGK 405
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V S+LD+Y KC D++ A F +V WN M+ Y
Sbjct: 406 QFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLD 465
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
++ ++ M+++G P+ T +++
Sbjct: 466 NLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSS 525
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + G + A K+F ++K+ +V+SWT +I+GY+ + +L +F+EM + G+
Sbjct: 526 VLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKS 585
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ G S + +C + AL G++IH + G S G AL++LYAR
Sbjct: 586 DNIGFASAI-SACAGIQALDQGRQIHAQS--CLSGYSDDLSIGNALVSLYAR 634
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 40/350 (11%)
Query: 6 LLQACSASK-SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L+ CS + S +Q+H + G F LI +Y L SA +F L
Sbjct: 188 VLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKAR 247
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++++ S++G + + + +M G+ P Y+F VL AC ++ E
Sbjct: 248 DSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVE-FFEFGKQL 306
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ VCN+++ +YS+ G++ A ++F M +RD S+NS++S G
Sbjct: 307 HGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYI 366
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
RA+ + + M +D +PD VT ++
Sbjct: 367 NRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSL 426
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + + A + F + NV+ W ++ GY + S IF +M +G+V P+
Sbjct: 427 LDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIV-PN 485
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+L +C LGA G++IH LK G F + L+ +YA+
Sbjct: 486 QFTYPSILKTCTTLGATDLGEQIHTQVLK--TGFQFNVYVSSVLIDMYAK 533
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 40/350 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+ C S+S +LH +L G + +LI Y DL A ++F ++P +
Sbjct: 87 LLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLNCAVNVFDEMPIRS 146
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + I L + + M K V D +F VL+ C+ A
Sbjct: 147 LSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIH 206
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+CN ++D+Y K G + A +VF+ ++ RD SW +M+S NG +
Sbjct: 207 AKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEE 266
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDA--------------------------------- 212
A+ + M G P ++V+ A
Sbjct: 267 EAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALV 326
Query: 213 --YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y R G +S A ++F + + +S+ +LISG + G +L +F++M D PD
Sbjct: 327 TLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK-PDC 385
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
++ +L +C +GAL +GK+ H Y +K M +I +LL LY +
Sbjct: 386 VTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVE---GSLLDLYVK 432
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 10/304 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S + AC+ ++L+Q +Q+H L G L+ +YA C +R A++ F Q+
Sbjct: 592 SAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK 651
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ S+++ ++ G + + +A+M G+ + + F + A A +A +
Sbjct: 652 DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV-RIGKQI 710
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N+++ +Y+KCG ++ A R F EM +++ SWNSM++ Y +G
Sbjct: 711 HGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCG 770
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
A+++ E M+ P+ VT V+ A +GLV E F + + P +
Sbjct: 771 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC 830
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ +GR G+ L + V + + PDA +L +C + G+ + L++
Sbjct: 831 VV---DLLGRSGL-LSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLEL 886
Query: 300 MPGE 303
P +
Sbjct: 887 EPKD 890
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 46/353 (13%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L +C+ + + + Q+H YM+ G F + L+ YA C + A+ +FR + Q +
Sbjct: 53 LSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQ 112
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++TS++A S + R + + EM + P+ + V+ AC +LE
Sbjct: 113 VSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHV 172
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
V +S++D Y+ G ++ A +F+E E+D +N+M+S Y N S+
Sbjct: 173 HVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSED 232
Query: 187 AVEVLESMRVD-----------------------------------GCEPDVVTRNTVMD 211
A+++ MR G E +V +T++D
Sbjct: 233 ALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLID 292
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + EA V +Q N + WT++I GY+ GR +L +F ++ + PD
Sbjct: 293 MYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHV 352
Query: 272 ALSGVLVSCRCLGALASGKE-----IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ VL +C G + G+E I YGL P Y A L+ LYAR
Sbjct: 353 CFTAVLTACNHAGFIDKGEEYFNKMITNYGLS--PDIDIY----ACLIDLYAR 399
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 40/280 (14%)
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
HS+ Q +E+ + M P YV L +CA+
Sbjct: 21 HSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLN-WHLGIQIHAYMIRSGYED 79
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+L +C++++D Y+KC + A ++F M++ D SW S+++ + N + A+ + + M
Sbjct: 80 NLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEML 139
Query: 196 VDGCEPDVVTRNTVMDA------------------------------------YCRMGLV 219
P+ T +V++A Y G +
Sbjct: 140 GTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQI 199
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+A +F + + + + + T+ISGY +L +F EM M P LS +L +
Sbjct: 200 DDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS-PTDHTLSSILSA 258
Query: 280 CRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
C L L G+++H +K+ Y + L+ +Y++
Sbjct: 259 CSSLAMLLQGRQVHSLVIKMGSERNVY--VASTLIDMYSK 296
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L ACS+ L Q +Q+H ++ GS R + + LI +Y+ D+ A + Q
Sbjct: 252 LSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS 311
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
+ N +TS++ +++ G + +E + + K + PD F VL AC + +
Sbjct: 312 KKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGE 371
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMS-CYV 179
D+ + ++D+Y++ G++ A + +EM + + W+S +S C +
Sbjct: 372 EYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKI 431
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
+ ++ ++++ C + T+ Y GL +EAS+V
Sbjct: 432 YGDVELGREAAIQLIKMEPC--NAAPYLTLAHIYTTKGLWNEASEV 475
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 46/353 (13%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L +C+ + + + Q+H YM+ G F + L+ YA C + A+ +FR + Q +
Sbjct: 53 LSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQ 112
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++TS++A S + R + + EM + P+ + V+ AC +LE
Sbjct: 113 VSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHV 172
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
V +S++D Y+ G ++ A +F+E E+D +N+M+S Y N S+
Sbjct: 173 HVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSED 232
Query: 187 AVEVLESMRVD-----------------------------------GCEPDVVTRNTVMD 211
A+++ MR G E +V +T++D
Sbjct: 233 ALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLID 292
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + EA V +Q N + WT++I GY+ GR +L +F ++ + PD
Sbjct: 293 MYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHV 352
Query: 272 ALSGVLVSCRCLGALASGKE-----IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ VL +C G + G+E I YGL P Y A L+ LYAR
Sbjct: 353 CFTAVLTACNHAGFIDKGEEYFNKMITNYGLS--PDIDIY----ACLIDLYAR 399
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 40/280 (14%)
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
HS+ Q +E+ + M P YV L +CA+
Sbjct: 21 HSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLN-WHLGIQIHAYMIRSGYED 79
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+L +C++++D Y+KC + A ++F M++ D SW S+++ + N + A+ + + M
Sbjct: 80 NLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEML 139
Query: 196 VDGCEPDVVTRNTVMDA------------------------------------YCRMGLV 219
P+ T +V++A Y G +
Sbjct: 140 GTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQI 199
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+A +F + + + + + T+ISGY +L +F EM M P LS +L +
Sbjct: 200 DDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS-PTDHTLSSILSA 258
Query: 280 CRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
C L L G+++H +K+ Y + L+ +Y++
Sbjct: 259 CSSLAMLLQGRQVHSLVIKMGSERNVY--VASTLIDMYSK 296
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L ACS+ L Q +Q+H ++ GS R + + LI +Y+ D+ A + Q
Sbjct: 252 LSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS 311
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
+ N +TS++ +++ G + +E + + K + PD F VL AC + +
Sbjct: 312 KKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGE 371
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMS-CYV 179
D+ + ++D+Y++ G++ A + +EM + + W+S +S C +
Sbjct: 372 EYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKI 431
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
+ ++ ++++ C + T+ Y GL +EAS+V
Sbjct: 432 YGDVELGREAAIQLIKMEPC--NAAPYLTLAHIYTTKGLWNEASEV 475
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS--LFRQ 60
+ +LL+AC K + +Q+H ++ G + + I + ++S +F +
Sbjct: 18 ITTLLKAC---KRIQHLQQVHASIIQRGLEQDQVLISNFISLANTLSISTRSYSTAVFNR 74
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ P+ F + + + H + I + M+ +G PD Y +P V+KAC+ +L
Sbjct: 75 VLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVL-V 133
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
DL + +++DMY KCG + A +VF+E+ ER+V SW +M+ YV
Sbjct: 134 GKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVT 193
Query: 181 NGLSQRAVEVLESMRVDGC---------------------------EPDVVTRNTVMDAY 213
G +A +V + M + E +VV+ T++D Y
Sbjct: 194 AGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGY 253
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
+ G + + +FEQ + +V++W+ LISGY G +L +F EM + V PD L
Sbjct: 254 AKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMN-VIPDEFVL 312
Query: 274 SGVLVSCRCLGALASGKEIHGY 295
G++ + LG L + + Y
Sbjct: 313 VGLMSAASQLGDLKLAQRVDSY 334
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T ++ YA D+ S+ LF Q + +V ++++++ + ++G A + ++ + EM V
Sbjct: 247 TTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVI 306
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD +V ++ A +QL L V ++++DM +KCG++E A +
Sbjct: 307 PDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALK 366
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
+F EM ERD+ S+ SM+ + +G + AV + M ++G PD V+ A GL
Sbjct: 367 LFQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGL 426
Query: 219 VSEASKVFEQIKDPNVISWTT--LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
+ + K F +++ IS T +GR G L E++ + P+AGA +
Sbjct: 427 IDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSG-QLRDAYELIKSMHIEPNAGAWGAL 485
Query: 277 LVSCRCLGALASGKEIHGYGLKIMP 301
+ +C+ G G+ + ++ P
Sbjct: 486 IGACKLQGDTELGEIVANRLFELEP 510
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 124/230 (53%), Gaps = 7/230 (3%)
Query: 6 LLQACSASK----SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+L+AC S+ L + K++H ++L HG T L+ +YA + A S+F +
Sbjct: 181 VLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAM 240
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLE 119
P N+ ++++++A ++++ + + +E + M + P+ VL+ACA LAAL E
Sbjct: 241 PDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAAL-E 299
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
L V N+++ MY +CG++ RVFD M++RDV SWNS++S Y
Sbjct: 300 HGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYG 359
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
+GL ++A+++ E+M G P +T TV+ A GLV EA +FE +
Sbjct: 360 MHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESM 409
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 41/325 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ +C SL+ +HH ++ G + P+ TKLI +Y D + A +F + +
Sbjct: 80 LINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKT 139
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC--AQLAAL-LEXXX 122
+F + +I + + Y +M + G+ + + + VLKAC ++L+ L
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGK 199
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V ++LD+Y++ G V A+ VF M ++++ SW++M++CY N
Sbjct: 200 EIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNE 259
Query: 183 LSQRAVEVLESMRVDGCE--PDVVTR---------------------------------- 206
+ +A+E+ + M ++ C+ P+ +T
Sbjct: 260 MPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPV 319
Query: 207 -NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
NT++ Y R G +S +VF+ +K +VISW +LIS Y G ++ IF M+N G
Sbjct: 320 LNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRG- 378
Query: 266 VFPDAGALSGVLVSCRCLGALASGK 290
V P VL +C G + K
Sbjct: 379 VSPSYITFITVLCACSHAGLVEEAK 403
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 40/203 (19%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM--------------------- 174
D + +++MY G V+ A +VFDE RE+ +F WN++
Sbjct: 108 DPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMN 167
Query: 175 --------------MSCYVCNGLS----QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM 216
+ V + LS ++ E+ + G E V T++D Y R
Sbjct: 168 WIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARF 227
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSG 275
G VS AS VF + D N++SW+ +I+ Y+ +L +F+ M+ + P+ +
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 276 VLVSCRCLGALASGKEIHGYGLK 298
VL +C L AL GK +H Y L+
Sbjct: 288 VLQACASLAALEHGKLVHAYVLR 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQAC++ +L K +H Y+L G LI +Y C ++ + +F + +
Sbjct: 287 SVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKR 346
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+V ++ S+++ + HGL ++ I+ + M +GVSP F VL AC+ A L+E
Sbjct: 347 DVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSH-AGLVE 400
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 81/389 (20%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH---SLFR 59
L SLL+ C KS+ +Q+H + G H+ KL + ++ H S+F
Sbjct: 5 LISLLKNC---KSIFHLQQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIFN 61
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P++F + ++ + + I + ++R G+ PD Y +P VLKA A +A +
Sbjct: 62 HTLHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQ 121
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS-CY 178
D V NS +DMY++ G ++ ++FDE+ ERD SWN M+S C
Sbjct: 122 GTKIHAFVFKTGLDS-DYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCV 180
Query: 179 VCNGLSQRAVEVLESMRVDGCEP----------------------------------DVV 204
C + AVEV + MRVD E D
Sbjct: 181 KCRRF-EEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFT 239
Query: 205 TR--NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG-------------- 248
R N ++D YC+ G VS A ++F+ + + NV WT++++GY S G
Sbjct: 240 MRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPT 299
Query: 249 -----------------RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
R ++ +F EM G V PD + +L C LG L G+
Sbjct: 300 RDVVLWTAMINGYVQFNRFDEAVALFEEMQVRG-VKPDKFIVVALLTCCAQLGTLEHGRW 358
Query: 292 IHGYGLKIMPGEIFYRS-AGAALLTLYAR 319
IH Y + I + G +L+ +YA+
Sbjct: 359 IHDY---VRENRIVVDAVVGTSLIEMYAK 384
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 19/265 (7%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T ++ Y C +L A LF + P +V +T+++ + + + + + EM+ +GV
Sbjct: 275 TSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVK 334
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD ++ +L CAQL L E D V S+++MY+KCG VE +
Sbjct: 335 PDKFIVVALLTCCAQLGTL-EHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLE 393
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VF+ ++E+D SW S++ NG + A+E+ E M++ G +PD VT +++A GL
Sbjct: 394 VFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGL 453
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG-- 271
V E K+F + +PN+ + I +GR G+ L E++ PD
Sbjct: 454 VEEGHKLFHSMSCIYGIEPNLEHYGCFI---DLLGRAGL-LHEAEELIKK---LPDQKNE 506
Query: 272 ---ALSGVLVS-CRCLGALASGKEI 292
A+ G +S CR G G+ I
Sbjct: 507 TIVAIYGSFLSACRTYGNTDMGERI 531
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 139/356 (39%), Gaps = 73/356 (20%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+A + Q ++H ++ G + + + +YA+ + LF ++ + +
Sbjct: 109 VLKAVAFIADFRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERD 168
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRF---KGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ +++ + + +E + MR + +S V L ACA + +E
Sbjct: 169 SVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVV--SSLTACAA-SRNVEVGK 225
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV--- 179
+R+ N++LDMY KCG V A +FD M E++V W SM++ YV
Sbjct: 226 EIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCG 285
Query: 180 -----------------------CNGLSQ-----RAVEVLESMRVDGCEP---------- 201
NG Q AV + E M+V G +P
Sbjct: 286 ELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLT 345
Query: 202 -------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
D V ++++ Y + G V ++ +VF +K+ + S
Sbjct: 346 CCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTAS 405
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
WT++I G + G+ +L +F EM G PD +L +C G + G ++
Sbjct: 406 WTSIICGLAMNGKTIEALELFEEMKIFGAK-PDDVTFIVLLNACSHGGLVEEGHKL 460
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 46/356 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP--- 62
+LQAC K+LN+ KQLH Y L G +I +Y+ + A ++F +
Sbjct: 261 MLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHS 320
Query: 63 -----------------------------------QPNVFAFTSILAFHSRHGLARQCIE 87
+P++ + SIL+ + G +
Sbjct: 321 RNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLT 380
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
++ + G PD L+A +L + D+ VC S++DMY
Sbjct: 381 SFRSLHSLGFKPDSCSVTSALQAVIELG-FFKLGKEIHGYIMRSNLNYDVYVCTSLVDMY 439
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
K +E A V + ++V +WNS++S Y G AV++L M +G PD+VT N
Sbjct: 440 VKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWN 499
Query: 208 TVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
++ Y G + EA + +IK PNV+SWT LISG S ++ +L IF +M +
Sbjct: 500 GLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAE 559
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V P++ + +L +C L G+E+H + +K+ + Y AL+ +Y+
Sbjct: 560 N-VKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIY--VATALIDMYSE 612
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ C A + ++H ++ G H + LI Y C + A+ +F + P
Sbjct: 160 VLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKE 219
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
F + +I+ + R + +E + +M+ K+L+AC +L AL E
Sbjct: 220 DFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHG 279
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE--RDVFSWNSMMSCYVCNGL 183
L VCNS++ MYS+ + A VFD M + R++ SWNS++ Y +G
Sbjct: 280 YALRFGLVSNTL-VCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGC 338
Query: 184 SQRAVEVLES-MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
A++ + + M G +PD++T W +++S
Sbjct: 339 LNDALDTIRNGMECSGIKPDIIT-------------------------------WNSILS 367
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
GY G + L FR + + G PD+ +++ L + LG GKEIHGY ++
Sbjct: 368 GYLLRGSFEMVLTSFRSLHSLGFK-PDSCSVTSALQAVIELGFFKLGKEIHGYIMR 422
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 14/287 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ S +A +L + M+ G L+ Y+ + A ++ ++
Sbjct: 464 NSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKS 523
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PNV ++T++++ S++ ++ +++M+ + V P+ +L ACA +LL+
Sbjct: 524 SGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAG-PSLLK 582
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V +++DMYS+ G ++ A VF++++E+ + WN MM Y
Sbjct: 583 KGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYA 642
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-DPNVISWT 238
+ + + + + MR PD +T ++ A GLV E K F+ ++ D N++
Sbjct: 643 IHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVP-- 700
Query: 239 TLISGY----SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
I Y +G+ G L + + PDA +L SC+
Sbjct: 701 -TIEHYCCMVDLLGKSGF-LDEASHFIETMPIKPDASIWGALLASCK 745
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 133/350 (38%), Gaps = 52/350 (14%)
Query: 16 LNQAKQLHHYMLLHG----SHRKPFFTT---KLIQIYADCDDLRSAHSLFRQLPQPNVFA 68
LN+ + L+ M LH + + F T +++ Y + D SA +F N
Sbjct: 61 LNELRTLNSVMELHAQIIKTPKNYNFATIDGTMMRNYLEFGDFLSAIKIFFVGFARNYLL 120
Query: 69 FTSILA-FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
+ S L F S G + + + EM KGV D F VLK C L L
Sbjct: 121 WNSFLEEFESFGGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICLALREFL-FGLEVHAC 179
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
D+ + ++++ Y KC ++ A +VF E ++ F WN+++ + + + A
Sbjct: 180 LIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNA 239
Query: 188 VEVLESMRVDGCEPDVVTR-----------------------------------NTVMDA 212
+E+ M+ D + V T N+++
Sbjct: 240 LELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISM 299
Query: 213 YCRMGLVSEASKVFEQIKD--PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y R A VF+ ++D N+ SW ++I Y+ G +L R + + PD
Sbjct: 300 YSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDI 359
Query: 271 ----GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTL 316
LSG L+ L S + +H G K P SA A++ L
Sbjct: 360 ITWNSILSGYLLRGSFEMVLTSFRSLHSLGFK--PDSCSVTSALQAVIEL 407
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 51/356 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
L SLL+ C ++K+L +Q+H +H H+ ++ I + D + +F +
Sbjct: 24 LLSLLKQCPSTKTL---QQIHTQFTIHSIHKPNHLLSQSISL----KDFTYSTLIFSHIT 76
Query: 62 PQPNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P PN +AF +L A + + Y +M+ +SP+ + FP V ACA L +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEE-IRM 135
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D NS++ MY +CG+ A +VFDE+ E+D+ SWNS++S Y
Sbjct: 136 ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAK 195
Query: 181 NGLSQRAVEVLESMRVD-GCEPD--------------------------VVTRNTVMDAY 213
G ++ AVEV +R + G EPD VV R +++Y
Sbjct: 196 LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY 255
Query: 214 CRMGLVSEASK---------VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
L+S SK +F+ + + I+W IS Y+ G ++ +F M +G
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGL-KIMPGEIFYRSAGAALLTLYAR 319
V P+ L+ VL +C +GAL GK++ Y + + +IF AL+ +YA+
Sbjct: 316 -VDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIF---VATALIDMYAK 367
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M L S+L AC L + + +++ G + + LI +Y+ C +L S+ +F
Sbjct: 220 MSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDG 279
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P + + + ++ ++++G+A + I + M+ GV P+ VL ACA + A L+
Sbjct: 280 MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA-LDL 338
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V +++DMY+KCG +E A RVF++M ++ SWN+M+S
Sbjct: 339 GKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALAS 398
Query: 181 NGLSQRAVEVLESMRVDG--CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PN 233
+G ++ A+ + E M +G P+ +T +++ A GLV E ++F+ + P
Sbjct: 399 HGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 458
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ ++ ++ S G + + +M PD L + +C+ + G+ +
Sbjct: 459 IEHYSCMVDLLSRAGHLYEAWDVIEKMPEK----PDNVTLGALHSACQRKKNVDIGERVI 514
Query: 294 GYGLKIMP 301
L++ P
Sbjct: 515 QMLLELDP 522
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 38/318 (11%)
Query: 9 ACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFA 68
AC+ + + A+ H + G ++ +Y C + A +F ++ + ++ +
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
+ S+L+ +++ G AR+ +E + +R + G PD VL AC +L L E
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDL-ELGRWVEGF 244
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+ + ++++ MYSKCG++ + R+FD M RD +WN+ +S Y NG++ A
Sbjct: 245 VVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEA 304
Query: 188 VEVLESMRVDGCEPDVVTRNTVM-----------------------------------DA 212
+ + SM+ +G +P+ VT V+ D
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND-GMVFPDAG 271
Y + G + A +VF + N SW +IS +S G+ +L +F M ++ G P+
Sbjct: 365 YAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDI 424
Query: 272 ALSGVLVSCRCLGALASG 289
+L +C G + G
Sbjct: 425 TFVSLLSACVHAGLVDEG 442
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 41/332 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S ++C+ + QLH Y L T + +YA CD + A +F P P
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNP 335
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +++ ++R + +E + ++ + D L AC+ + LE
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395
Query: 125 XXXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D +C N++LDMY+KCG + A +FD+M +D SWN++++ + N
Sbjct: 396 GLAVKCGL---DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV--------------------------------- 209
+ + + SM EPD T +V
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D YC+ G++ EA K+ E++++ +SW ++ISG+SS + +L F M+ G V
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG-VI 571
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
PD + VL C L + GK+IHG LK+
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKL 603
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 127/261 (48%), Gaps = 6/261 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++AC+ K+LN ++H ++ G F + +I +Y C L A + +L +
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEER 537
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ SI++ S + ++ M GV PD + + VL CA LA + E
Sbjct: 538 TTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV-ELGKQI 596
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + ++++DMYSKCG+++ + +F++ +RD +W++M+ Y +GL
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ A+++ E M++ +P+ +V+ A MG V + F +++ DP + ++
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 240 LISGYSSVGRHGVSLGIFREM 260
++ G+ +L + M
Sbjct: 717 MVDLLGRSGQVNEALELIESM 737
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 149/380 (39%), Gaps = 70/380 (18%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ Q CS K++N KQ H + + G F + L+Q Y C +L A ++F ++PQ +
Sbjct: 44 IFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRD 103
Query: 66 VFAFT-------------------------------SILAFHSRHGLARQCIETYAEMRF 94
V ++ S+L+ + ++G R+ IE + +MR
Sbjct: 104 VISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRL 163
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+ D F VLKAC + D+ +++DMYS C ++
Sbjct: 164 LEIQHDYATFAVVLKACTGIED-YGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCN-----GLSQRAVEVLESMRVDGCE--------- 200
A +F EM ER+ W+++++ YV N GL V + E M V
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 201 ---------------------PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
D + +D Y + + +A KVF +P S
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNA 342
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
LI GY+ + +L IFR + + F D +LSG L +C + G ++HG +K
Sbjct: 343 LIVGYARQDQVLEALEIFRSLQKSYLDF-DEISLSGALTACSAIKGYLEGIQLHGLAVKC 401
Query: 300 MPGEIFYRSAGAALLTLYAR 319
G F +L +YA+
Sbjct: 402 --GLDFNICVANTILDMYAK 419
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 37/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L ACSA K + QLH + G ++ +YA C L A +F +
Sbjct: 375 LSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDME 434
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +I+A H ++ + + + M + PD Y F V+KACA A L
Sbjct: 435 IKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA-LNYGM 493
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V ++++DMY KCG + A ++ + + ER SWNS++S +
Sbjct: 494 EVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEK 553
Query: 183 LSQRAVEVLESMRVDGCEP-----------------------------------DVVTRN 207
+ A+ M G P DV +
Sbjct: 554 QGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIAS 613
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++D Y + G + ++ +FE+ + ++W+ +I Y+ G ++ +F EM V
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQN-VK 672
Query: 268 PDAGALSGVLVSCRCLGALASG 289
P+ VL +C +G + G
Sbjct: 673 PNHTIFISVLRACAHMGFVDKG 694
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 145/349 (41%), Gaps = 39/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ + Q+H + G T L+ +Y+ C L A ++F ++P+ N
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERN 235
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+++++A + R+ + ++ Y M +G+ F ++CA L+A E
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF-ELGTQLH 294
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V + LDMY+KC + A +VF+ S N+++ Y
Sbjct: 295 AYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVL 354
Query: 186 RAVEVLESMRVD-----------------------------------GCEPDVVTRNTVM 210
A+E+ S++ G + ++ NT++
Sbjct: 355 EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTIL 414
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + EA +F+ ++ + +SW +I+ + +L +F M+ M PD
Sbjct: 415 DMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME-PDD 473
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V+ +C AL G E+HG +K G ++ G+A++ +Y +
Sbjct: 474 YTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWF--VGSAIIDMYCK 520
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 41/332 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S ++C+ + QLH Y L T + +YA CD + A +F P P
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNP 335
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +++ ++R + +E + ++ + D L AC+ + LE
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLH 395
Query: 125 XXXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D +C N++LDMY+KCG + A +FD+M +D SWN++++ + N
Sbjct: 396 GLAVKCGL---DFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV--------------------------------- 209
+ + + SM EPD T +V
Sbjct: 453 HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGS 512
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D YC+ G++ EA K+ E++++ +SW ++ISG+SS + +L F M+ G V
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG-VI 571
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
PD + VL C L + GK+IHG LK+
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKL 603
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 127/261 (48%), Gaps = 6/261 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++AC+ K+LN ++H ++ G F + +I +Y C L A + +L +
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEER 537
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ SI++ S + ++ M GV PD + + VL CA LA + E
Sbjct: 538 TTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV-ELGKQI 596
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + ++++DMYSKCG+++ + +F++ +RD +W++M+ Y +GL
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ A+++ E M++ +P+ +V+ A MG V + F +++ DP + ++
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 240 LISGYSSVGRHGVSLGIFREM 260
++ G+ +L + M
Sbjct: 717 MVDLLGRSGQVNEALELIESM 737
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 149/380 (39%), Gaps = 70/380 (18%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ Q CS K++N KQ H + + G F + L+Q Y C +L A ++F ++PQ +
Sbjct: 44 IFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRD 103
Query: 66 VFAFT-------------------------------SILAFHSRHGLARQCIETYAEMRF 94
V ++ S+L+ + ++G R+ IE + +MR
Sbjct: 104 VISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRL 163
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+ D F VLKAC + D+ +++DMYS C ++
Sbjct: 164 LEIQHDYATFAVVLKACTGIED-YGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCN-----GLSQRAVEVLESMRVDGCE--------- 200
A +F EM ER+ W+++++ YV N GL V + E M V
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 201 ---------------------PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
D + +D Y + + +A KVF +P S
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNA 342
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
LI GY+ + +L IFR + + F D +LSG L +C + G ++HG +K
Sbjct: 343 LIVGYARQDQVLEALEIFRSLQKSYLDF-DEISLSGALTACSAIKGYLEGIQLHGLAVKC 401
Query: 300 MPGEIFYRSAGAALLTLYAR 319
G F +L +YA+
Sbjct: 402 --GLDFNICVANTILDMYAK 419
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 37/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L ACSA K + QLH + G ++ +YA C L A +F +
Sbjct: 375 LSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDME 434
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +I+A H ++ + + + M + PD Y F V+KACA A L
Sbjct: 435 IKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA-LNYGM 493
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V ++++DMY KCG + A ++ + + ER SWNS++S +
Sbjct: 494 EVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEK 553
Query: 183 LSQRAVEVLESMRVDGCEP-----------------------------------DVVTRN 207
+ A+ M G P DV +
Sbjct: 554 QGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIAS 613
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++D Y + G + ++ +FE+ + ++W+ +I Y+ G ++ +F EM V
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQN-VK 672
Query: 268 PDAGALSGVLVSCRCLGALASG 289
P+ VL +C +G + G
Sbjct: 673 PNHTIFISVLRACAHMGFVDKG 694
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 145/349 (41%), Gaps = 39/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ + Q+H + G T L+ +Y+ C L A ++F ++P+ N
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERN 235
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+++++A + R+ + ++ Y M +G+ F ++CA L+A E
Sbjct: 236 SVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAF-ELGTQLH 294
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V + LDMY+KC + A +VF+ S N+++ Y
Sbjct: 295 AYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVL 354
Query: 186 RAVEVLESMRVD-----------------------------------GCEPDVVTRNTVM 210
A+E+ S++ G + ++ NT++
Sbjct: 355 EALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTIL 414
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + EA +F+ ++ + +SW +I+ + +L +F M+ M PD
Sbjct: 415 DMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME-PDD 473
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V+ +C AL G E+HG +K G ++ G+A++ +Y +
Sbjct: 474 YTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWF--VGSAIIDMYCK 520
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 160/334 (47%), Gaps = 40/334 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
L+S+++ACSA +N + H +L G + LI +Y + A +F +L
Sbjct: 157 LSSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELF 216
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ +VF +TSI++ +R+ + ++ ++ + M R +GV PDGY F +L ACA L LL
Sbjct: 217 VKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLG-LLRQ 275
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYV 179
++ V +S+LDMY KCG V + VF+ + E++ SW +M+ Y
Sbjct: 276 GKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYC 335
Query: 180 CNGLSQRAVEVLES------------------------------MRV-DGCEPDVVTRNT 208
N Q ++++ M V G DV+ +
Sbjct: 336 QNKEYQNVLDLVRERGDLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESA 395
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G+V A +F ++ N+I+W +++SG++ GR +L +F +M+ +G + P
Sbjct: 396 LVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEG-IKP 454
Query: 269 DAGALSGVLVSCRCLGALASGKEIHG----YGLK 298
D+ VL +C G + G+++ YG+K
Sbjct: 455 DSITFVAVLFACSHAGLVDEGRKVFTLMGEYGIK 488
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 152/357 (42%), Gaps = 51/357 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD---DLRSAHSLFRQL 61
SLLQ + S + +H ++L G H F L+ +Y + L A LF L
Sbjct: 55 SLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSL 114
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++TS+++ ++R L Q I + EM V P+ + V+KAC+ L +
Sbjct: 115 HVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGR 174
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVC 180
+ C S++DMY V+ A RVFDE+ + DVF W S++SC+
Sbjct: 175 CFHSMVLTRGFDWNTVVSC-SLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTR 233
Query: 181 NGLSQRAVEVLESM-RVDGCEPD-----------------------------------VV 204
N + + +++ M RV G PD VV
Sbjct: 234 NDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVV 293
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
++++D Y + G V + VFE++ D N +SWT ++ Y + L + RE +
Sbjct: 294 VESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRERGDL 353
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIH-GYGLKIMPGEIFYRSAGAALLTLYAR 319
A VL +C L A+ GKE+H Y K ++ S AL+ LYA+
Sbjct: 354 NFY-----AFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIES---ALVDLYAK 402
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 13/286 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+LL L A++L M + + + T ++ YA C DL SA F Q P+
Sbjct: 284 NALLDMYVKCDCLVDARELFDRM----ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPR 339
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N +++++A +S++ ++ ++ + EM +GV P + VL AC QL L
Sbjct: 340 KNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWI 399
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ + N+++DMY+KCG ++ A VF M ER++ SWN+M++ Y NG
Sbjct: 400 HQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGR 459
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+++A+ V + MR G EP+ +T +++ A GL+SE + F+ ++ P +
Sbjct: 460 AKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYA 519
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
++ +GR G+ ++ + N M P A +L +CR G
Sbjct: 520 CMV---DLLGRTGLLEEAYKLIANMPMQ-PCEAAWGALLNACRMHG 561
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 164/387 (42%), Gaps = 84/387 (21%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQI--YADCDDLRSAHSLFRQLPQ 63
++++CS ++ Q KQ+ M L G F +++I A DL AH++F ++ Q
Sbjct: 50 IMESCS---TMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQ 106
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFK---GVSPDGYVFPKVLKACAQLAALLEX 120
PN F + +++ + AR+ I ++ + V D F LKAC Q + E
Sbjct: 107 PNTFMWNTMIRGYQN---ARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEG 163
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+L V N ++ Y++ G ++ A +VFDE ++DV +W +M+ Y
Sbjct: 164 ESVYCVVWKMGFDC-ELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAA 222
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
+ S+ A+EV E M + EP+ VT
Sbjct: 223 HDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSL 282
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG----------------- 248
N ++D Y + + +A ++F+++ +V SWT++++GY+ G
Sbjct: 283 HNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNA 342
Query: 249 --------------RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+ SL +F EM+ G+V P L VL +C L L G IH
Sbjct: 343 VCWSAMIAGYSQNNKPKESLKLFHEMMERGVV-PIEHTLVSVLSACGQLTCLNLGDWIHQ 401
Query: 295 YGL--KIMPGEIFYRSAGAALLTLYAR 319
Y + KI+P + + A++ +YA+
Sbjct: 402 YFVVGKIIPLSVTLEN---AIVDMYAK 425
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 147/364 (40%), Gaps = 74/364 (20%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC +++ + + ++ + G + LI YA+ L++A +F + +V
Sbjct: 151 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 210
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+T+++ ++ H + + +E + M V P+ V+ AC+ + L E
Sbjct: 211 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL-EMGKRVHE 269
Query: 127 XXXXXXXXXDLRVCNSVLDMY-------------------------------SKCGDVEG 155
L + N++LDMY +KCGD+E
Sbjct: 270 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLES 329
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP-------------- 201
A R FD+ ++ W++M++ Y N + ++++ M G P
Sbjct: 330 ARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQ 389
Query: 202 ----------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
V N ++D Y + G + A++VF + + N+ISW T
Sbjct: 390 LTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNT 449
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI-----HG 294
+I+GY++ GR ++ +F +M N G P+ +L +C G ++ G+E
Sbjct: 450 MIAGYAANGRAKQAINVFDQMRNMGFE-PNNITFVSLLTACSHGGLISEGREYFDNMERK 508
Query: 295 YGLK 298
YG+K
Sbjct: 509 YGIK 512
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT---KLIQIYADCDDLRSAHSLFR 59
L S+L AC LN +H Y ++ P T ++ +YA C + +A +F
Sbjct: 380 LVSVLSACGQLTCLNLGDWIHQYFVV--GKIIPLSVTLENAIVDMYAKCGSIDAATEVFS 437
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+P+ N+ ++ +++A ++ +G A+Q I + +MR G P+ F +L AC+
Sbjct: 438 TMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSH 491
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 161/381 (42%), Gaps = 72/381 (18%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL ACS + ++ Q+H ++ G + F LI YA C + +F ++ + N
Sbjct: 138 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 197
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++TS++ +S +A++ + + EM GV P+ + ACA+L L E
Sbjct: 198 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDL-ELGKKVC 256
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V N++LDMY KCGD+ +FDE ++++ +N++MS YV +GL+
Sbjct: 257 NLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG 316
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------------RNTVM 210
+ VL+ M G PD VT N ++
Sbjct: 317 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 376
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF------------- 257
D Y + G A KVF+ + + V++W +LI+G G ++L IF
Sbjct: 377 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 436
Query: 258 ------------------REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
REM N G + D + G+ +C LGAL K I+ Y I
Sbjct: 437 MIGAMVQASMFEEAIDLLREMQNQG-IKGDRVTMVGIASACGYLGALDLAKWIYTY---I 492
Query: 300 MPGEIFYR-SAGAALLTLYAR 319
+I G AL+ +++R
Sbjct: 493 EKNDIHIDMQLGTALVDMFSR 513
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 147/336 (43%), Gaps = 56/336 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-- 61
NS LQ C K+L + KQLH ML G F KLI A C + + SL L
Sbjct: 36 NSSLQTC---KTLIELKQLHCNMLKKGV----FNINKLI---AACVQMGTHESLNYALNA 85
Query: 62 ------PQPNVFAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQL 114
+ +++ +++ ++ GL ++ I Y M G+ PD + FP +L AC+++
Sbjct: 86 FKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKI 145
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
A E DL V NS++ Y+ CG V+ +VFDEM ER+V SW S+
Sbjct: 146 MAFSE-GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSL 204
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR---------------------------- 206
++ Y +++ AV + M G EP+ VT
Sbjct: 205 INGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGV 264
Query: 207 -------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
N ++D Y + G + ++F++ D N++ + T++S Y G G L + E
Sbjct: 265 KSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDE 324
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
M+ G PD + + +C LG L+ GK H Y
Sbjct: 325 MLQKGQ-RPDKVTMLSTIAACAQLGDLSVGKSSHAY 359
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 130/313 (41%), Gaps = 41/313 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD--------------- 49
S + AC+ L+ K H Y+ +G R + +I +Y C
Sbjct: 339 STIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK 398
Query: 50 ----------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR 93
+L A +F ++P+ N+ ++ +++ + + + I+ EM+
Sbjct: 399 TVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQ 458
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
+G+ D + AC L AL + D+++ +++DM+S+CGD
Sbjct: 459 NQGIKGDRVTMVGIASACGYLGAL-DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDP 517
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
A RVF+ M +RDV +W + + G ++ A+E+ + M + D ++ A+
Sbjct: 518 LNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAF 577
Query: 214 CRMGLVSEASKVF---EQIK--DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
G V + ++F E+I P ++ + ++ +GR G+ F +++ + P
Sbjct: 578 SHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMV---DLLGRAGLLEEAF-DLMKSMPIKP 633
Query: 269 DAGALSGVLVSCR 281
+ L +CR
Sbjct: 634 NDVIWGSFLAACR 646
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 13/286 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+LL L A++L M + + + T ++ YA C DL SA F Q P+
Sbjct: 234 NALLDMYVKCDCLVDARELFDRM----ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPR 289
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N +++++A +S++ ++ ++ + EM +GV P + VL AC QL L
Sbjct: 290 KNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWI 349
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ + N+++DMY+KCG ++ A VF M ER++ SWN+M++ Y NG
Sbjct: 350 HQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGR 409
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+++A+ V + MR G EP+ +T +++ A GL+SE + F+ ++ P +
Sbjct: 410 AKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYA 469
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
++ +GR G+ ++ + N M P A +L +CR G
Sbjct: 470 CMV---DLLGRTGLLEEAYKLIANMPMQ-PCEAAWGALLNACRMHG 511
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 163/386 (42%), Gaps = 84/386 (21%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQI--YADCDDLRSAHSLFRQLPQP 64
+++CS ++ Q KQ+ M L G F +++I A DL AH++F ++ QP
Sbjct: 1 MESCS---TMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQP 57
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFK---GVSPDGYVFPKVLKACAQLAALLEXX 121
N F + +++ + AR+ I ++ + V D F LKAC Q + E
Sbjct: 58 NTFMWNTMIRGYQN---ARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGE 114
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+L V N ++ Y++ G ++ A +VFDE ++DV +W +M+ Y +
Sbjct: 115 SVYCVVWKMGFDC-ELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAH 173
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
S+ A+EV E M + EP+ VT
Sbjct: 174 DCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLH 233
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG------------------ 248
N ++D Y + + +A ++F+++ +V SWT++++GY+ G
Sbjct: 234 NALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 293
Query: 249 -------------RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ SL +F EM+ G+V P L VL +C L L G IH Y
Sbjct: 294 CWSAMIAGYSQNNKPKESLKLFHEMMERGVV-PIEHTLVSVLSACGQLTCLNLGDWIHQY 352
Query: 296 GL--KIMPGEIFYRSAGAALLTLYAR 319
+ KI+P + + A++ +YA+
Sbjct: 353 FVVGKIIPLSVTLEN---AIVDMYAK 375
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 147/364 (40%), Gaps = 74/364 (20%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC +++ + + ++ + G + LI YA+ L++A +F + +V
Sbjct: 101 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 160
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+T+++ ++ H + + +E + M V P+ V+ AC+ + L E
Sbjct: 161 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL-EMGKRVHE 219
Query: 127 XXXXXXXXXDLRVCNSVLDMY-------------------------------SKCGDVEG 155
L + N++LDMY +KCGD+E
Sbjct: 220 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLES 279
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP-------------- 201
A R FD+ ++ W++M++ Y N + ++++ M G P
Sbjct: 280 ARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQ 339
Query: 202 ----------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
V N ++D Y + G + A++VF + + N+ISW T
Sbjct: 340 LTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNT 399
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI-----HG 294
+I+GY++ GR ++ +F +M N G P+ +L +C G ++ G+E
Sbjct: 400 MIAGYAANGRAKQAINVFDQMRNMGFE-PNNITFVSLLTACSHGGLISEGREYFDNMERK 458
Query: 295 YGLK 298
YG+K
Sbjct: 459 YGIK 462
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT---KLIQIYADCDDLRSAHSLFR 59
L S+L AC LN +H Y ++ P T ++ +YA C + +A +F
Sbjct: 330 LVSVLSACGQLTCLNLGDWIHQYFVV--GKIIPLSVTLENAIVDMYAKCGSIDAATEVFS 387
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+P+ N+ ++ +++A ++ +G A+Q I + +MR G P+ F +L AC+
Sbjct: 388 TMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSH 441
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 153/371 (41%), Gaps = 57/371 (15%)
Query: 3 LNSLLQACSA-SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L S+ ACS L KQ+H ++L +G R F L+ +YA + A +LF
Sbjct: 189 LVSVAHACSNLINGLLLGKQVHAFVLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
++ ++ +I++ S++ + + M GV P+G VL AC+ L L
Sbjct: 248 DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGK 307
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V +++DMY C E VFD M R + WN+M++ YV N
Sbjct: 308 EIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRN 367
Query: 182 GLSQRAVEVLESMRVD------------------------------------GCEPDVVT 205
A+E+ M + G E D
Sbjct: 368 EFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYV 427
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM----- 260
+N +MD Y RMG + A +F + +++SW T+I+GY GRH +L + +M
Sbjct: 428 QNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQA 487
Query: 261 ---------VNDGMVF---PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS 308
D F P++ L VL C L AL GKEIH Y +K M + +
Sbjct: 488 EHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDV--A 545
Query: 309 AGAALLTLYAR 319
G+AL+ +YA+
Sbjct: 546 VGSALVDMYAK 556
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 115/270 (42%), Gaps = 40/270 (14%)
Query: 84 QCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSV 143
Q I TY M GV PD + FP VLKA A + L V NS
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDL-NLGKQLHAHVFKFGQALPTAVPNSF 126
Query: 144 LDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD- 202
++MY KCGD++ A RVFDE+ RD SWNSM++ + AV + M ++ P
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186
Query: 203 ----------------------------------VVTRNTVMDAYCRMGLVSEASKVFEQ 228
T N ++ Y ++G V EA +F+
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS 288
D +++SW T+IS S R +L M+ G V P+ L+ VL +C L L
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG-VRPNGVTLASVLPACSHLEMLGC 305
Query: 289 GKEIHGYGLKIMPGEIFYRS-AGAALLTLY 317
GKEIH + L M ++ S G AL+ +Y
Sbjct: 306 GKEIHAFVL--MNNDLIENSFVGCALVDMY 333
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 56/317 (17%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L S+L ACS + L K++H ++L++ F L+ +Y +C +F +
Sbjct: 290 LASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM 349
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEX 120
+ + + +++A + R+ + IE + EM F+ G+SP+ VL AC + + L+
Sbjct: 350 FRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDK 409
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D V N+++DMYS+ G +E A +F M +D+ SWN+M++ YV
Sbjct: 410 EGIHSCVVKWGFEK-DKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVV 468
Query: 181 NGLSQRAVEVLESMRVDGCE------------------PDVVTRNTVM------------ 210
G A+ +L M+ E P+ VT TV+
Sbjct: 469 CGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Query: 211 -----------------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
D Y + G ++ + VFEQ+ NVI+W LI Y
Sbjct: 529 KEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMH 588
Query: 248 GRHGVSLGIFREMVNDG 264
G+ +L +FR MV +G
Sbjct: 589 GKGEEALKLFRRMVEEG 605
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 124/317 (39%), Gaps = 42/317 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L+A + + LN KQLH ++ G + +Y C D+ +A +F ++
Sbjct: 90 AVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNR 149
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ S++ R + + M + V P + V AC+ L +
Sbjct: 150 DDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNL---INGLLLG 206
Query: 125 XXXXXXXXXXXDLRV--CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D R N+++ MY+K G V A +FD ++D+ SWN+++S N
Sbjct: 207 KQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQND 266
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
+ A+ L M G P+ VT +V+
Sbjct: 267 RFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVG 326
Query: 211 ----DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
D YC + VF+ + + W +I+GY ++ +F EMV + +
Sbjct: 327 CALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGL 386
Query: 267 FPDAGALSGVLVSC-RC 282
P++ LS VL +C RC
Sbjct: 387 SPNSVTLSSVLPACVRC 403
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L AC +S + +H ++ G + + L+ +Y+ + A S+F +
Sbjct: 393 LSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN 452
Query: 63 QPNVFAFTSILAFH---SRH------------GLARQCIET---YAEMRFKGVSPDGYVF 104
+ ++ ++ +++ + RH G A I T Y + + + P+
Sbjct: 453 RKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTL 512
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
VL CA LAAL + D+ V ++++DMY+KCG + + VF++M
Sbjct: 513 MTVLPGCAALAALGKGKEIHAYAVKQMLSK-DVAVGSALVDMYAKCGCLNLSRTVFEQMS 571
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-----CEPDVVTRNTVMDAYCRMGLV 219
R+V +WN ++ Y +G + A+++ M +G P+ VT + + G+V
Sbjct: 572 VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMV 631
Query: 220 SEASKVFEQIKDPNVISWTT 239
E +F +K + I T+
Sbjct: 632 DEGLNLFYTMKAKHGIEPTS 651
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ + +H + G F T ++ Y+ C LR A +F + N
Sbjct: 110 VLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKN 169
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++T ++ G R+ ++ + + G+ PDG+V +VL+ACA+L LE
Sbjct: 170 VVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGD-LESGRWID 228
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V S++DMY+KCG +E A VFD M E+D+ W++M+ Y NGL +
Sbjct: 229 RCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPR 288
Query: 186 RAVEVLESMRVDGCEPDV-----------------------------------VTRNTVM 210
A+E+ MR PD V +++
Sbjct: 289 EAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLI 348
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + EA V++ +K+ + + + +ISG + G+ G + G+F +M G + P+
Sbjct: 349 DFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG-IPPNE 407
Query: 271 GALSGVLVSCRCLGALASGK 290
G+L C G + G+
Sbjct: 408 HTFVGLLCGCTHAGLVDDGR 427
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 147/358 (41%), Gaps = 51/358 (14%)
Query: 5 SLLQACSAS--KSLNQAKQLHHYML-LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L C AS K L AK H +L L+ H + L ++ + +F +
Sbjct: 4 ELTNWCIASGLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKT 63
Query: 62 P-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P N F + +++ + YA M + PD + F VLKACA+L L
Sbjct: 64 PTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARL-NLFHL 122
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V +V+ YSKCG + A +VFD+M ++V SW M+ +
Sbjct: 123 GVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIE 182
Query: 181 NGLSQRAVEVLESMRVDGCEPD-----------------------------------VVT 205
G + AV++ + G PD V
Sbjct: 183 FGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFV 242
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM--VND 263
+++D Y + G + EA VF+ + + +++ W+ +I GY+S G ++ +F EM VN
Sbjct: 243 ATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVN- 301
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA--GAALLTLYAR 319
V PD A+ G L SC LGAL G G +M E F + G +L+ YA+
Sbjct: 302 --VRPDCYAMVGALSSCASLGALELGNWAKG----LMNYEEFLSNPVLGTSLIDFYAK 353
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ L + + M G R F T L+ +Y C + A +F + + +
Sbjct: 211 VLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKD 270
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +++++ ++ +GL R+ IE + EMR V PD Y L +CA L A LE
Sbjct: 271 IVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGA-LELGNWAK 329
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ + S++D Y+KCG +E A V+ M+E+D +N+++S G
Sbjct: 330 GLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVG 389
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
A V M G P+ T ++ GLV + F +
Sbjct: 390 AAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSM 433
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 84 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 143
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 144 VLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 200
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M++CY NG
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTV---------------------------------- 209
+++ M +P+ VT +V
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 320
Query: 210 -MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
MD Y + +A +F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 321 LMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 379
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L +H + +K G + GA+L+ +YA+
Sbjct: 380 DAIALVKILTTISELGILQQAVCLHAFVIK--NGFENNQFIGASLIEVYAK 428
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 45/310 (14%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVS----PDGYVFP 105
+ AH LF++ P V+ + ++L + G + + + +M VS PD Y
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
LK+CA L LL D+ V ++++D+Y+KCG + A +VF E +
Sbjct: 82 IALKSCAGLRKLL-LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------- 205
DV W S++S Y +G + A+ M V + PD VT
Sbjct: 141 PDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRS 200
Query: 206 ----------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR 249
N+++ Y + G + AS +F ++ D ++ISW+T+++ Y+ G
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
L +F EM+ D + P+ + VL +C C+ L G +IH L + G +
Sbjct: 261 ETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTV 317
Query: 310 GAALLTLYAR 319
AL+ +Y +
Sbjct: 318 STALMDMYMK 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A LF ++P+
Sbjct: 285 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 344
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 345 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL-GILQQAVCL 403
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 404 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 463
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A+++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 464 EEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 523
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 524 IMVDLLGRMGELDMALDVINNM 545
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA LH +++ +G F LI++YA C + A+ +F+ +
Sbjct: 384 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 443
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 444 YKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGI 503
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G+++ A V + M
Sbjct: 504 NMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 84 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 143
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 144 VLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 200
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M++CY NG
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTV---------------------------------- 209
+++ M +P+ VT +V
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 320
Query: 210 -MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
MD Y + +A +F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 321 LMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 379
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L +H + +K G + GA+L+ +YA+
Sbjct: 380 DAIALVKILTTISELGILQQAVCLHAFVIK--NGFENNQFIGASLIEVYAK 428
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 45/310 (14%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVS----PDGYVFP 105
+ AH LF++ P V+ + ++L + G + + + +M VS PD Y
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
LK+CA L LL D+ V ++++D+Y+KCG + A +VF E +
Sbjct: 82 IALKSCAGLRKLL-LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------- 205
DV W S++S Y +G + A+ M V + PD VT
Sbjct: 141 PDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRS 200
Query: 206 ----------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR 249
N+++ Y + G + AS +F ++ D ++ISW+T+++ Y+ G
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
L +F EM+ D + P+ + VL +C C+ L G +IH L + G +
Sbjct: 261 ETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTV 317
Query: 310 GAALLTLYAR 319
AL+ +Y +
Sbjct: 318 STALMDMYMK 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A LF ++P+
Sbjct: 285 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 344
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 345 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL-GILQQAVCL 403
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 404 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 463
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A+++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 464 EEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 523
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 524 IMVDLLGRMGELDMALDVINNM 545
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA LH +++ +G F LI++YA C + A+ +F+ +
Sbjct: 384 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 443
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 444 YKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGI 503
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G+++ A V + M
Sbjct: 504 NMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 144/318 (45%), Gaps = 10/318 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L +A + + K+LH + SH+ P KL++ YA C + +F ++ N
Sbjct: 24 LAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRN 83
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + ++ + + + + EM G PD Y +P VLKAC+ + L
Sbjct: 84 VVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACS-CSENLRYGLLIH 142
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L V N ++ MY KCG + A RVFDEM +DV SWNSM++ Y N
Sbjct: 143 GDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFD 202
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL--VSEASKVFEQIKDPNVISWTTLISG 243
A+E+ M G +PD T ++M A V K+F ++ N+ISW +I
Sbjct: 203 DALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRV 262
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY--GLKIMP 301
Y ++ ++ +M V PDA + VL +C L AL G+ IH Y K+ P
Sbjct: 263 YMKNSLPTQAVDLYLQM-EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCP 321
Query: 302 GEIFYRSAGAALLTLYAR 319
+ S L+ +YAR
Sbjct: 322 NLLLENS----LIDMYAR 335
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 55 HSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
+F L + N+ ++ ++ + ++ L Q ++ Y +M V PD F VL AC L
Sbjct: 242 EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDL 301
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
+ALL +L + NS++DMY++CG ++ A RVFD M+ RDV SW S+
Sbjct: 302 SALL-LGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSL 360
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
+S Y G AV + M G PD + ++ A GL+ E F+Q+ D
Sbjct: 361 ISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYR 420
Query: 232 --PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
P + + L+ GR + I ++M + P+ + +L SCR + G
Sbjct: 421 ITPRIEHYACLVDLLGRAGRVDEAYNIIKQMP----IEPNERVWATLLSSCRVFTNMDIG 476
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC +L +++H Y+ LI +YA C L A +F ++
Sbjct: 293 SVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR 352
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++TS+++ + G + + EM G +PD F +L AC+ L E
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYF 412
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
+ ++D+ + G V+ A + +M E + W +++S
Sbjct: 413 KQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 114 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 173
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 174 VLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 230
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M++CY NG
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTV---------------------------------- 209
+++ M +P+ VT +V
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 210 -MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
MD Y + +A +F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 351 LMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 409
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L +H + +K G + GA+L+ +YA+
Sbjct: 410 DAIALVKILTTISELGILQQAVCLHAFVIK--NGFENNQFIGASLIEVYAK 458
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 48/358 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+ C + S++Q LH L G F TKL +YA + AH LF++ P
Sbjct: 7 LVKLLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 63
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVS----PDGYVFPKVLKACAQLAAL 117
V+ + ++L + G + + + +M VS PD Y LK+CA L L
Sbjct: 64 HRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKL 123
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ V ++++D+Y+KCG + A +VF E + DV W S++S
Sbjct: 124 L-LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 182
Query: 178 YVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------------------- 205
Y +G + A+ M V + PD VT
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDN 242
Query: 206 ----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N+++ Y + G + AS +F ++ D ++ISW+T+++ Y+ G L +F EM+
Sbjct: 243 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEML 302
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D + P+ + VL +C C+ L G +IH L + G + AL+ +Y +
Sbjct: 303 -DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTVSTALMDMYMK 357
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A LF ++P+
Sbjct: 315 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 374
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 375 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL-GILQQAVCL 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 434 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 493
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A+++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 494 EEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 553
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 554 IMVDLLGRMGELDMALDVINNM 575
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA LH +++ +G F LI++YA C + A+ +F+ +
Sbjct: 414 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 474 YKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGI 533
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G+++ A V + M
Sbjct: 534 NMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 575
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 114 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 173
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 174 VLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 230
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M++CY NG
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTV---------------------------------- 209
+++ M +P+ VT +V
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 210 -MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
MD Y + +A +F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 351 LMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 409
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L +H + +K G + GA+L+ +YA+
Sbjct: 410 DAIALVKILTTISELGILQQAVCLHAFVIK--NGFENNQFIGASLIEVYAK 458
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 48/358 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+ C + S++Q LH L G F TKL +YA + AH LF++ P
Sbjct: 7 LVKLLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 63
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVS----PDGYVFPKVLKACAQLAAL 117
V+ + ++L + G + + + +M VS PD Y LK+CA L L
Sbjct: 64 HRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKL 123
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ V ++++D+Y+KCG + A +VF E + DV W S++S
Sbjct: 124 L-LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 182
Query: 178 YVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------------------- 205
Y +G + A+ M V + PD VT
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDN 242
Query: 206 ----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N+++ Y + G + AS +F ++ D ++ISW+T+++ Y+ G L +F EM+
Sbjct: 243 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEML 302
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D + P+ + VL +C C+ L G +IH L + G + AL+ +Y +
Sbjct: 303 -DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTVSTALMDMYMK 357
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A LF ++P+
Sbjct: 315 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 374
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 375 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISEL-GILQQAVCL 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 434 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 493
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A+++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 494 EEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 553
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 554 IMVDLLGRMGELDMALDVINNM 575
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA LH +++ +G F LI++YA C + A+ +F+ +
Sbjct: 414 LVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 474 YKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGI 533
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G+++ A V + M
Sbjct: 534 NMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 575
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 73/364 (20%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA------------DCDDLRS 53
L ++C+ +K+ ++ KQLH + L H P T +I +YA D LR
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRD 196
Query: 54 AHS-------------------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
A S LF ++P +V ++ ++++ + + G + I + EM+
Sbjct: 197 AVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE 256
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V P+ VL AC + E +L++ N+++DMY KCG+ +
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSG-ELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETD 315
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------- 205
A +FD + E+DV SWN+M+ Y L + A+ + E M +P+ VT
Sbjct: 316 IARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACA 375
Query: 206 -------------------RN--------TVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
RN +++D Y + G + A +VF + N+ SW
Sbjct: 376 CLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWN 435
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE-----IH 293
++SG++ G +L +F EMVN G+ PD GVL +C G + G + I
Sbjct: 436 AMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ 495
Query: 294 GYGL 297
YG+
Sbjct: 496 DYGI 499
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 76/362 (20%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLP 62
+LL+ C K++N KQ+H ++ G + F +KLI A DL A SLF +
Sbjct: 33 NLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQ 89
Query: 63 QP---NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
Q NVF + S++ +S + ++ M + GV P+ + FP + K+C + A E
Sbjct: 90 QHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHE 149
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD--------------------------- 152
+ V SV+ MY+ G+
Sbjct: 150 -GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYV 208
Query: 153 ----VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV----EVLES----------- 193
++ A R+FDE+ +DV SWN+M+S YV +G + A+ E+ E+
Sbjct: 209 SQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVV 268
Query: 194 --------------------MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
+R +G ++ N ++D YC+ G A ++F+ I++ +
Sbjct: 269 VLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKD 328
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
VISW T+I GYS + + +L +F M+ V P+ G+L +C CLGAL GK +H
Sbjct: 329 VISWNTMIGGYSYLSLYEEALALFEVMLRSN-VKPNDVTFLGILHACACLGALDLGKWVH 387
Query: 294 GY 295
Y
Sbjct: 388 AY 389
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 4/228 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SL+ C S + Q+H +L +G F T L+ +Y D L + LF +L
Sbjct: 549 SLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSN 608
Query: 64 -PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ +T++++ H+++ + Q + Y EMR + PD F VL+ACA L++L +
Sbjct: 609 LKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQE 668
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
+L ++++DMY+KCGDV+ AA+VF+E+ ++DV SWNSM+ + N
Sbjct: 669 IHSLIFHTGFDLDEL-TSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKN 727
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
G ++RA++V + M + PD VT V+ A GLVSE ++F+ +
Sbjct: 728 GYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNM 775
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 42/353 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+S+L +C+ L+ +QLH ++ L+ +YA L+ A F ++
Sbjct: 347 SSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKY 406
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ +IL + + + + M GV PD +L AC + +LE
Sbjct: 407 RDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIK-VLEAGLQ 465
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+L +S++DMYSKCG +E A +++ M E V S N++++ Y
Sbjct: 466 FHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKD- 524
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMD----------------AYCRMGLV-------- 219
++ A+ +L M++ G +P +T +++D A + GL+
Sbjct: 525 TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGT 584
Query: 220 ------------SEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+E + +F ++ + +++ WT LISG++ +L ++REM D +
Sbjct: 585 SLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREM-RDNNI 643
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD VL +C L +L G+EIH L G +AL+ +YA+
Sbjct: 644 LPDQATFVTVLRACALLSSLQDGQEIH--SLIFHTGFDLDELTSSALVDMYAK 694
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV A+ +++ H + G ++ +E Y +MR GV VL A A L L
Sbjct: 206 NVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDL-GCGLLV 264
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V +S+++MY KC + A +VFD + +R+V WN+++ Y NG
Sbjct: 265 HGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCL 324
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
+E+ M G +PD T N +
Sbjct: 325 SDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNAL 384
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G + EA K FE++K + ISW ++ GY + +FR M G+V PD
Sbjct: 385 VDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVV-PD 443
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
++ +L +C + L +G + HG +K+ + +F AG++L+ +Y++
Sbjct: 444 EVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLF---AGSSLIDMYSK 491
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 43/352 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A + L +H + G + + LI +Y C+ L A +F +
Sbjct: 245 LASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVC 304
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV + +IL ++++G +E ++EM G PD + + +L +CA L+
Sbjct: 305 DRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACF-DFLDIGR 363
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L V N+++DMY+K G ++ A + F+ M+ RD SWN+++ YV
Sbjct: 364 QLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEE 423
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
A + M G PD V +++
Sbjct: 424 EETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGS 483
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + G + +A K++ + + +V+S LI+GY ++ ++ + EM G+
Sbjct: 484 SLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGY-AIKDTKEAINLLHEMQILGLK- 541
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLY 317
P + ++ C+ + G +IH LK ++ G F G +LL +Y
Sbjct: 542 PSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFL---GTSLLGMY 590
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 133/335 (39%), Gaps = 77/335 (22%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR--- 59
++ L +C+ ++L +H ++ +G T LI YA C L SA +LF
Sbjct: 75 FSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVS 134
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+L + FT+++ + R G+ ++ + EM+ G D V VL AC L
Sbjct: 135 RLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQ-SGFVLDELVIVTVLNACVNL----- 188
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCY 178
G ++ A +FDEM +V +WN M+S +
Sbjct: 189 -------------------------------GKLDHACELFDEMDGCGNVVAWNVMISGH 217
Query: 179 VCNGLSQRAVEVLESMRVDGC-----------------------------------EPDV 203
G + AVE MR++G E V
Sbjct: 218 GKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSV 277
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+++++ Y + ++ +A KVF+ + D NV+ W T++ Y+ G + +F EM+
Sbjct: 278 YVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGC 337
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G PD S +L SC C L G+++H +K
Sbjct: 338 GND-PDEFTYSSILSSCACFDFLDIGRQLHSTIIK 371
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 39/325 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC K L Q H + G F + LI +Y+ C + A ++ +P+
Sbjct: 449 SILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEW 508
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++A ++ ++ I EM+ G+ P F ++ C + ++
Sbjct: 509 SVVSMNALIAGYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIH 567
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCNGL 183
+ S+L MY + +F E+ + + W +++S + N
Sbjct: 568 CAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDC 627
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVM--------------------------------- 210
S +A+ + MR + PD T TV+
Sbjct: 628 SDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDELTSSA 687
Query: 211 --DAYCRMGLVSEASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + G V A+KVFE++ +VISW ++I G++ G +L +F EM V
Sbjct: 688 LVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSS-VS 746
Query: 268 PDAGALSGVLVSCRCLGALASGKEI 292
PD GVL +C G ++ G++I
Sbjct: 747 PDDVTFLGVLTACSHAGLVSEGRQI 771
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 164/356 (46%), Gaps = 53/356 (14%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+ L++ C A K++ + K++H+++ +G K F L+ +Y + L A +F ++P+
Sbjct: 88 SELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPE 147
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++T++++ +S L + ++ M GV P+ Y F VL+AC +L L +
Sbjct: 148 RNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDLKQ---- 203
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++++D YSK G++ A VF EM D WNS+++ + +
Sbjct: 204 VHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSD 263
Query: 184 SQRAVEVLESMRVDG---------------------------------CEPDVVTRNTVM 210
A+ + +SMR +G + D++ N ++
Sbjct: 264 GDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLILNNALL 323
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D YC+ G + +A +F ++ +VISW+T+ISG + G +L +F M G P+
Sbjct: 324 DMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSG-PRPNY 382
Query: 271 GALSGVLVSCRCLGALASG-------KEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ GVL +C G + G K ++G I PG Y + LL L R
Sbjct: 383 ITILGVLFACSHAGLVNEGWGYFRSMKNLYG----IDPGREHY----SCLLDLLGR 430
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+L+AC + L KQ+H +L G F + LI Y+ +L A +FR++
Sbjct: 188 FSSVLRAC---ERLCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMV 244
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + SI+A ++H + + Y MR +G D VL+AC ++LLE
Sbjct: 245 TGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTG-SSLLELGR 303
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL + N++LDMY KCG +E A +F M +DV SW++M+S NG
Sbjct: 304 QVHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNG 361
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
S A+ + +SM+V G P+ +T V+ A GLV+E F +K DP +
Sbjct: 362 FSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHY 421
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ L+ G+ + + EM + PD +L +CR
Sbjct: 422 SCLLDLLGRAGKLDEMVKLIHEMTCE----PDVVTWRTLLDACR 461
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QPN+ TS L H + + ++ M +GV D + +++K C A+ E
Sbjct: 46 QPNIAPETSSLLNHCYNRDLPRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKR 105
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ N++L+MY K +E A VFD+M ER+V SW +M+S Y
Sbjct: 106 VHNHIFSNGYRPKTFLI-NTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAK 164
Query: 183 LSQRAVEVLESMRVDGCEP--------------------------------DVVTRNTVM 210
L+ RA+++L M DG P DV R+ ++
Sbjct: 165 LNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDLKQVHSGILKAGLESDVFVRSALI 224
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP-D 269
DAY ++G + EA VF ++ + + W ++I+ ++ +L +++ M +G FP D
Sbjct: 225 DAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREG--FPAD 282
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L+ VL +C L G+++H + LK I ALL +Y +
Sbjct: 283 QSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLIL----NNALLDMYCK 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 41/267 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L+AC+ S L +Q+H ++L + L+ +Y C L A +F ++
Sbjct: 286 LTSVLRACTGSSLLELGRQVHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIFSRMA 343
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V +++++++ +++G + + + + M+ G P+ VL AC+ + E
Sbjct: 344 VKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNE--- 400
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L + + YS D+ G A DEM
Sbjct: 401 ----GWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEM------------------- 437
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCR----MGLVSEASKVFEQIKDPNVISWT 238
V+++ M CEPDVVT T++DA CR + L + A+K ++ + ++
Sbjct: 438 -----VKLIHEM---TCEPDVVTWRTLLDA-CRAQRNVDLATYAAKEILKLDQQDAGAYV 488
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGM 265
L + Y++ R + R M G+
Sbjct: 489 LLSNIYANSKRWDDVAEVRRTMSARGI 515
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 114 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 173
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 174 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 230
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG- 182
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M +CY NG
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 183 -----------LSQR-------AVEVL----------ESMRVD------GCEPDVVTRNT 208
L +R V VL E M++ G E +
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+MD Y + +A F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 351 LMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 409
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L H + +K G + GA+L+ +YA+
Sbjct: 410 DAIALVKILTTVSELGILQQAVCFHAFVIK--NGFENNQFIGASLIEVYAK 458
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 155/358 (43%), Gaps = 48/358 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+ C + S++Q LH L G F TKL +YA + AH LF++ P
Sbjct: 7 LVKLLETCCSKLSISQ---LHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 63
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVS----PDGYVFPKVLKACAQLAAL 117
V+ + ++L + G + + + +M+ VS PD Y LK+CA L L
Sbjct: 64 HKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKL 123
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ V ++++D+Y+KCG + A VF E + DV W S++S
Sbjct: 124 L-LGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSG 182
Query: 178 YVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------------------- 205
Y +G + A+ M V + PD VT
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDN 242
Query: 206 ----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N+++ Y + G + AS +F ++ D ++ISW+T+ + Y+ G L +F EM+
Sbjct: 243 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEML 302
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D + P+ + VL +C C+ L G +IH L + G + AL+ +Y +
Sbjct: 303 -DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTVSTALMDMYMK 357
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 123/262 (46%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A F ++P+
Sbjct: 315 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKK 374
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 375 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSEL-GILQQAVCF 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 434 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 493
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 494 EEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 553
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 554 IMVDLLGRMGELDMALDLINNM 575
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA H +++ +G F LI++YA C + A+ +F+ +
Sbjct: 414 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLE 119
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 474 YKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 114 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 173
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 174 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 230
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG- 182
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M +CY NG
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 183 -----------LSQR-------AVEVL----------ESMRVD------GCEPDVVTRNT 208
L +R V VL E M++ G E +
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+MD Y + +A F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 351 LMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 409
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L H + +K G + GA+L+ +YA+
Sbjct: 410 DAIALVKILTTVSELGILQQAVCFHAFVIK--NGFENNQFIGASLIEVYAK 458
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 155/358 (43%), Gaps = 48/358 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL+ C + S++Q LH L G F TKL +YA + AH LF++ P
Sbjct: 7 LVKLLETCCSKLSISQ---LHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 63
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVS----PDGYVFPKVLKACAQLAAL 117
V+ + ++L + G + + + +M+ VS PD Y LK+CA L L
Sbjct: 64 HKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKL 123
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ V ++++D+Y+KCG + A VF E + DV W S++S
Sbjct: 124 L-LGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSG 182
Query: 178 YVCNGLSQRAVEVLESMRV-DGCEPDVVT------------------------------- 205
Y +G + A+ M V + PD VT
Sbjct: 183 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDN 242
Query: 206 ----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N+++ Y + G + AS +F ++ D ++ISW+T+ + Y+ G L +F EM+
Sbjct: 243 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEML 302
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D + P+ + VL +C C+ L G +IH L + G + AL+ +Y +
Sbjct: 303 -DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYGFEMETTVSTALMDMYMK 357
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 123/262 (46%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A F ++P+
Sbjct: 315 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKK 374
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 375 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSEL-GILQQAVCF 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 434 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 493
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 494 EEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 553
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 554 IMVDLLGRMGELDMALDLINNM 575
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA H +++ +G F LI++YA C + A+ +F+ +
Sbjct: 414 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLE 119
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 474 YKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 531
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 45/335 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ SL+ AC+ L+Q K +H Y++ +G + T L+ +Y C D+ A S+F +
Sbjct: 238 VGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFS 297
Query: 63 QP------NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
++ +T+++ +++ G + +E + + ++ + P+ +L ACAQL
Sbjct: 298 VSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLEN 357
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
++ LR NS++DMY+KCG + A VF ++DV SWNS++S
Sbjct: 358 IVMGKLLHVLVVKYGLDDTSLR--NSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVIS 415
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------ 212
Y +G + A+++ MR++ PD VT V+ A
Sbjct: 416 GYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVS 475
Query: 213 ------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
Y + G + A VF+ + + N ++W +I G G SL +FR+M
Sbjct: 476 SSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDM 535
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ + +V P+ + +L +C G + G I +
Sbjct: 536 LKEELV-PNEVVFTTLLAACSHSGMVEEGLMIFDF 569
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 137/330 (41%), Gaps = 53/330 (16%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
K K LH +++ G P T LI +YA LR A +LF +LP P +F I+
Sbjct: 51 KHPTTVKTLHASLIISG--HPP--DTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLII 106
Query: 74 AFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+H + + + Y R G D VF +LK +QL ++
Sbjct: 107 RWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIV--LTTKLHCNILKS 164
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D V S++D YSKCG + A +VFDE+ +R V SW SM+ YV N ++ + +
Sbjct: 165 NAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFN 224
Query: 193 SMR-----------------------------------VDGCEPDVVTRNTVMDAYCRMG 217
MR +G E + ++++ Y + G
Sbjct: 225 RMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCG 284
Query: 218 LVSEASKVFEQIK------DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
+ +A VF++ +++ WT +I GY+ G +L +F + + P++
Sbjct: 285 DIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDK-KWYRILPNSV 343
Query: 272 ALSGVLVSCRCLGALASGKEIH----GYGL 297
L+ +L +C L + GK +H YGL
Sbjct: 344 TLASLLSACAQLENIVMGKLLHVLVVKYGL 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY--SSVGRHGVSL-GIFR 258
D +++DAY + G + +A KVF++I D +V+SWT++I Y + G+ L R
Sbjct: 168 DSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMR 227
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
E DG VF + ++ +C LG L GK +HGY +K
Sbjct: 228 EGFLDGNVF----TVGSLVTACTKLGCLHQGKWVHGYVIK 263
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 44/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C+ + L K +H ++ F + LI +Y C + A +F + P+P+V
Sbjct: 22 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 81
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+TSI++ + + G + ++ M + VSPD V ACAQL+
Sbjct: 82 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNF---KLGRS 138
Query: 126 XXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG- 182
D ++C NS+L +Y K G ++ A+ +F EM ++D+ SW++M +CY NG
Sbjct: 139 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 198
Query: 183 -----------LSQR-------AVEVL----------ESMRVD------GCEPDVVTRNT 208
L +R V VL E M++ G E +
Sbjct: 199 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 258
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+MD Y + +A F ++ +VI+W L SGY+ G S+ +FR M++ G P
Sbjct: 259 LMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRP 317
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
DA AL +L + LG L H + +K G + GA+L+ +YA+
Sbjct: 318 DAIALVKILTTVSELGILQQAVCFHAFVIK--NGFENNQFIGASLIEVYAK 366
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 123/262 (46%), Gaps = 7/262 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC+ +L + ++H + +G + +T L+ +Y C A F ++P+
Sbjct: 223 SVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKK 282
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+ + + ++ +G+ + + + M G PD K+L ++L +L+
Sbjct: 283 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSEL-GILQQAVCF 341
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++Y+KC +E A +VF M +DV +W+S+++ Y +G
Sbjct: 342 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 401
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A++ M +P+ VT +++ A GL+ E +F+ + + PN +
Sbjct: 402 EEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYA 461
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ +G ++L + M
Sbjct: 462 IMVDLLGRMGELDMALDLINNM 483
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 40/257 (15%)
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD Y LK+CA L LL D+ V ++++D+Y+KCG + A
Sbjct: 13 PDNYSVSIALKSCAGLRKLL-LGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 71
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVT------------ 205
VF E + DV W S++S Y +G + A+ M V + PD VT
Sbjct: 72 VFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 131
Query: 206 -----------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
N+++ Y + G + AS +F ++ D ++ISW+T+ +
Sbjct: 132 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFA 191
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
Y+ G L +F EM+ D + P+ + VL +C C+ L G +IH L + G
Sbjct: 192 CYADNGAETDVLDLFIEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIH--ELAVNYG 248
Query: 303 EIFYRSAGAALLTLYAR 319
+ AL+ +Y +
Sbjct: 249 FEMETTVSTALMDMYMK 265
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L S L QA H +++ +G F LI++YA C + A+ +F+ +
Sbjct: 322 LVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMT 381
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLE 119
+V ++SI+A + HG + ++ + +M P+ F +L AC+ + E
Sbjct: 382 YKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKE 439
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 39/294 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
H+ SLLQ C+ +++ Q+H ++L+G K KL+ YA L+ AH LF Q+
Sbjct: 17 HIFSLLQTCNNTET--NILQIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQI 74
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P + ++ ++ + ++ Y +M PDG+ + +L AC + L+
Sbjct: 75 HNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFLLSACVR-GGLVREG 133
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V ++++ Y+ CG VE A VFD+M +R V SWNS++ YV
Sbjct: 134 EQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYV-- 191
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
+ G A VFE+I NV+SWTT+I
Sbjct: 192 ---------------------------------KCGDFDAARNVFEEIPVRNVVSWTTMI 218
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+GY+ G+ +L +F +M V D L VL +C LG L G+ IH Y
Sbjct: 219 AGYAQNGKCVEALSLFGQM-RRARVELDQVVLVAVLSACAELGDLKLGRWIHWY 271
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 37/260 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD---------------- 49
LL AC + + +QLH +L G F T LI YADC
Sbjct: 120 LLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRS 179
Query: 50 ---------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
D +A ++F ++P NV ++T+++A ++++G + + + +MR
Sbjct: 180 VVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRR 239
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V D V VL ACA+L L+ +R+ N+++ MY+ CG ++
Sbjct: 240 ARVELDQVVLVAVLSACAELGD-LKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIID 298
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC-----EPDVVTRNTV 209
A R+F +M + SW ++ + GL + A+++ + M DG PD T
Sbjct: 299 EAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAA 358
Query: 210 MDAYCRMGLVSEASKVFEQI 229
+ A G V E ++FE +
Sbjct: 359 LCACSHAGFVEEGCRIFESM 378
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 53/367 (14%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGS--HRKPFFTTKLIQIYADC---DDLRSAH 55
+H N++L K+L Q K H +L + + K +KLI D + A+
Sbjct: 2 IHPNTILSLLPKCKTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYAN 61
Query: 56 SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
LFRQ+ PNV+ F S++ +++ + Y +M G SPD + FP VLKAC+ +
Sbjct: 62 LLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIY 121
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ ++ V +L+MY +C ++E +VFD++ + +V +W ++
Sbjct: 122 DQVS-GKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLI 180
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTR----------------------------- 206
+ YV N + A+EV + M G E + VT
Sbjct: 181 NGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYD 240
Query: 207 -------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
+++ Y + G ++ A ++F ++ + N+++W +I+ Y+ R+ +
Sbjct: 241 PFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEA 300
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAA 312
LG+F M+ +G PD VL C LA G+ +H Y LK M +I + A
Sbjct: 301 LGLFFYMLANGFC-PDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDI---ALATA 356
Query: 313 LLTLYAR 319
LL +YA+
Sbjct: 357 LLDMYAK 363
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 42/328 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS K +H +L G + T L+ +Y +C ++ S +F ++P+ N
Sbjct: 113 VLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWN 172
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL------AALLE 119
V A+T ++ + + R+ +E + EM GV + L ACA+ + E
Sbjct: 173 VVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHE 232
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY- 178
++ + ++++MY+KCG + A +F++M ER++ +WN M++ Y
Sbjct: 233 RVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYN 292
Query: 179 ---------------VCNGLSQRAVEVLESMRV-------------------DGCEPDVV 204
+ NG L + V D+
Sbjct: 293 QYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIA 352
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQ-IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
++D Y + G + A K+F ++ +V+ WT++I+ + G +L +F+ M D
Sbjct: 353 LATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQED 412
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE 291
+ PD GVL +C +G + ++
Sbjct: 413 SSLVPDHITYIGVLFACSHVGLVEEAQK 440
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 11/233 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYM-------LLHGSHRKPFFTTKLIQIYADCDDLRSAH 55
+N+L+ AC+ + ++ + +H + + S+ T ++++YA C L A
Sbjct: 212 VNALI-ACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVAR 270
Query: 56 SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
LF ++P+ N+ A+ ++ ++++ + + + M G PD F VL CA+
Sbjct: 271 ELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCAR-R 329
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE-MRERDVFSWNSM 174
+L D+ + ++LDMY+K G++ A ++F+ + ++DV W SM
Sbjct: 330 CVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSM 389
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGC-EPDVVTRNTVMDAYCRMGLVSEASKVF 226
++ +G A+ + + M+ D PD +T V+ A +GLV EA K F
Sbjct: 390 INALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQF 442
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 6/252 (2%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
R T +I ++ D+ A F +P+ N+ + S+L+ + ++G + + ++ Y M
Sbjct: 443 RNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSM 502
Query: 93 RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
R GV PD F ++ACA LA +++ ++ V NS++ MYS+CG
Sbjct: 503 RSNGVQPDWITFTTSIRACADLA-IVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGL 561
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
++ A FD + ++D+ SWN+M++ + NGL + ++ E M C+P+ ++ +V+
Sbjct: 562 IKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSG 621
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTT--LISGYSSVGRHGVSLGIFREMVNDGMVF-PD 269
MGLV+E F+ + IS T +GR G+ L ++++ +GM F P+
Sbjct: 622 CSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGL-LEQAKDLI-EGMPFKPN 679
Query: 270 AGALSGVLVSCR 281
A S +L SCR
Sbjct: 680 ATVWSALLGSCR 691
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 144/361 (39%), Gaps = 78/361 (21%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M S+L AC+++ L LH +L F LI +YA C L A +F+
Sbjct: 279 MTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKS 338
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC-----AQLA 115
L + + ++ S++ GL + + +MR V D ++ P +L C A
Sbjct: 339 LREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG 398
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE--------------------- 154
LL V N+++ MY+KCGD +
Sbjct: 399 ELLHGYTIKSGMGSSAP------VGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMI 452
Query: 155 ---------GAAR-VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVV 204
G AR FD M ER++ +WNSM+S YV NG S+ +++ SMR +G +PD +
Sbjct: 453 TAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWI 512
Query: 205 T-----------------------------------RNTVMDAYCRMGLVSEASKVFEQI 229
T N+++ Y R GL+ EA F+ I
Sbjct: 513 TFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI 572
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
D ++ISW +++ ++ G + F +M+ P+ + VL C +G +A G
Sbjct: 573 DDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECK-PNHISYVSVLSGCSHMGLVAEG 631
Query: 290 K 290
K
Sbjct: 632 K 632
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 131/330 (39%), Gaps = 67/330 (20%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S+++AC + A QLH + G + ++ +Y C D+ A ++F +
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 63 QPNVFAFTS-------------------------------ILAFHSRHGLARQCIETYAE 91
+P++F + S +++ S+HG QC+ + E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M +G SP+ + VL ACA + L + DL N ++DMY+KCG
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDL-KWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG------------- 198
++ A RVF +RE D SWNS+++ V GL + A+ + MR
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387
Query: 199 -CE-PDVVTR--------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
C PD + N ++ Y + G +A VF + N IS
Sbjct: 388 VCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS 447
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
WT +I+ +S G G + G F M +V
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 145/362 (40%), Gaps = 80/362 (22%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ--PNVFAFTSILAFHSRHGLARQCIETY 89
HR F +I+ + A LF ++P + ++T++++ +S++G + ET+
Sbjct: 71 HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETF 130
Query: 90 AEM----RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC--NSV 143
+ M G + D + F V+KAC L + + C NSV
Sbjct: 131 SLMIRDTNDGGKNYDPFSFTSVMKACGSLG---DSRLAIQLHALVSKLGFGMETCIQNSV 187
Query: 144 LDMYSKCGDVE-------------------------------GAARVFDEMRERDVFSWN 172
+ MY KCGDV+ A ++F+ M ERD SWN
Sbjct: 188 VGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWN 247
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEP------------------------------- 201
+++S + +G + + + M G P
Sbjct: 248 TLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRM 307
Query: 202 ----DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
D+V N ++D Y + G + A +VF+ +++ + ISW +LI+G G +L +F
Sbjct: 308 EHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILF 367
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
+M +V D L +L C ++G+ +HGY +K G G A++T+Y
Sbjct: 368 NQMRRSSVVL-DEFILPTILGVCSGPDYASTGELLHGYTIKSGMGS--SAPVGNAIITMY 424
Query: 318 AR 319
A+
Sbjct: 425 AK 426
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 46/164 (28%)
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
MYS CG A +VF E R++F+WN+M+ V +
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS----------------------- 88
Query: 206 RNTVMDAYCRMGLVSEASKVFEQ--IKDPNVISWTTLISGYSSVGRHGVSLGIFREMV-- 261
RM S+A K+F++ ++ + +SWTT+ISGYS G H S F M+
Sbjct: 89 ---------RM---SDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRD 136
Query: 262 -NDGMVFPDAGALSGVLVSCRCLGALASGKEIH------GYGLK 298
NDG D + + V+ +C LG ++H G+G++
Sbjct: 137 TNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGME 180
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 37/320 (11%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
KSL + KQLH +L + PF+ T++I++YA + + AH +F + +VF + S++
Sbjct: 17 KSLLRVKQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMI 76
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
++ I + M + PD Y + ++ACA +
Sbjct: 77 RAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIRACAD-SFDFGMLRVVHGSAVSVGL 135
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D C++++ YSK G V A RVFD + E D+ WNS++S Y +G+ + +++ S
Sbjct: 136 GLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSS 195
Query: 194 MRVDGCEPDVVT------------------------RNTVMDAYCRMG--LVS------- 220
MR+ G +PD T + + +D+ C +G LVS
Sbjct: 196 MRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKC 255
Query: 221 --EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
A +VF I +P++++W+ LISGYS G + +L FR++ N D+ ++ VL
Sbjct: 256 IDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKL-NMKSKKLDSVLIATVLA 314
Query: 279 SCRCLGALASGKEIHGYGLK 298
S + + G EIHGY L+
Sbjct: 315 SITQMANVLPGCEIHGYVLR 334
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 37/321 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
++AC+ S + +H + G P + L+ Y+ + A +F + +P++
Sbjct: 111 IRACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDL 170
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ S+++ + G+ I+ ++ MR G PDG+ +L A ++LL
Sbjct: 171 VLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIAD-SSLLSIGQELHG 229
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
D V + ++ MYS+C ++ A RVF + D+ +W++++S Y G Q+
Sbjct: 230 LSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQK 289
Query: 187 AVEV-----LESMRVD------------------------------GCEPDVVTRNTVMD 211
A+ ++S ++D G E DV + ++D
Sbjct: 290 ALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGYVLRHGLESDVKVSSALID 349
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + + VF + + N+IS+ ++I Y G + +F EM+ G+V PD G
Sbjct: 350 MYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLV-PDEG 408
Query: 272 ALSGVLVSCRCLGALASGKEI 292
S +L +C G + G+E+
Sbjct: 409 TFSALLSACCHAGLVKDGREL 429
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L LL + S L+ ++LH G + L+ +Y+ C + SA+ +F +
Sbjct: 208 LAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIF 267
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P++ ++++++ +S+ G ++ + + ++ K D + VL + Q+A +L
Sbjct: 268 NPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCE 327
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D++V ++++DMYSKCG + VF M ER++ S+NSM+ Y +G
Sbjct: 328 IHGYVLRHGLES-DVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHG 386
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ +A + + M G PD T + ++ A C GLV + ++F ++KD
Sbjct: 387 CASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKD 435
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 156/352 (44%), Gaps = 44/352 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L C+ S+++ A+ +H Y+ G L+ +Y C + +F ++ +
Sbjct: 242 SVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDER 301
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++ +++ S GL+ ++ + M G+ P+ +L +L L +
Sbjct: 302 NEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELG-LFKLGMEV 360
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + NS++DMY+K G A+ +F++M +R++ SWNSM++ + N
Sbjct: 361 HGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHH 420
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------------------------RNTV 209
AVE+L M+ G P+ VT N +
Sbjct: 421 FAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNAL 480
Query: 210 MDAYCRMGLVSEASKVFE-QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
D Y + G +S A VF IKD +S+ LI GYS SL +F EM GM P
Sbjct: 481 TDMYSKCGHLSLARNVFNVSIKDK--VSYNILIIGYSQTTNSSESLNLFSEMRLSGMT-P 537
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGL-KIMPGEIFYRSAGAALLTLYAR 319
D + G++ +C L ++ GKEIHG+ + K+ +F A +LL LY +
Sbjct: 538 DIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLF---AANSLLDLYTK 586
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 149/305 (48%), Gaps = 13/305 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++L AC+ LN K++H ++ G F + L +Y+ C L A ++F
Sbjct: 442 FTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFNVSI 501
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ V ++ ++ +S+ + + + ++EMR G++PD F ++ ACA L+++ +
Sbjct: 502 KDKV-SYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSI-KQGK 559
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L NS+LD+Y+KCG ++ A +VFD ++ +DV SWN+M+ Y G
Sbjct: 560 EIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRG 619
Query: 183 LSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV----ISW 237
+ A+ + E+M+ D G E D V+ V+ A GL+ + +K F+Q++D N+ +
Sbjct: 620 EFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHY 679
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCRCLGALASGKEIHGYG 296
++ G+ + + R G+ F PDA +L +CR G + G +
Sbjct: 680 ACMVDLLGRAGQIEEAANLIR-----GLSFEPDANIWGALLGACRIYGNVELGHWAAEHL 734
Query: 297 LKIMP 301
K+ P
Sbjct: 735 FKLKP 739
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 45/319 (14%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA--FHSR 78
++H Y L G F LI +YA R A ++F ++ N+ ++ S++A +R
Sbjct: 359 EVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNR 418
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
H A +E +M+ G +P+ F VL ACA+L L DL
Sbjct: 419 HHFA--AVELLRQMQAHGENPNNVTFTNVLPACARL-GFLNVGKEIHARIIQTGCATDLF 475
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ N++ DMYSKCG + A VF+ + +D S+N ++ Y S ++ + MR+ G
Sbjct: 476 LSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSG 534
Query: 199 CEPDVVT-----------------------------------RNTVMDAYCRMGLVSEAS 223
PD+V+ N+++D Y + G + A+
Sbjct: 535 MTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLAT 594
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
KVF++I+ +V SW T+I GY G ++ +F M DG V D+ + VL +C
Sbjct: 595 KVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHG 654
Query: 284 GALASG----KEIHGYGLK 298
G + G K++ Y ++
Sbjct: 655 GLIEKGNKYFKQMQDYNIE 673
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 151/360 (41%), Gaps = 65/360 (18%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
C+ S++L+Q QLH + +L+ F + I A L ++ FR P+ ++ F
Sbjct: 41 CTHSQTLSQTNQLHAFSILNA------FLPHSVSISAS---LILKYASFRH-PETSLILF 90
Query: 70 TSILAFHSRHGLARQCIETYAEMRF------------KGVSPDGYVFPKVLKACAQLAAL 117
+ L F L I Y+ F GV PD + +P VLKAC+
Sbjct: 91 QNTLPFSKTAFLWNTLIRAYSIAGFFDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKF 150
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
+ D+ V N++L Y CG A VFDEM ERD SWN+++
Sbjct: 151 -DKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGL 209
Query: 178 YVCNGLSQRAVEVLESMRVDG--CEPDVVT------------------------------ 205
G + ++ + M V PD+VT
Sbjct: 210 CSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLS 269
Query: 206 -----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
N ++D Y + G KVF+++ + N +SW +I+G+S G +L FR M
Sbjct: 270 GHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSM 329
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+N GM P+ +S +L LG G E+HGY L++ + +IF G +L+ +YA+
Sbjct: 330 INTGMR-PNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIF---IGNSLIDMYAK 385
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 39/348 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC+ +L + G H P + +I C +L A +F +P+ +V
Sbjct: 145 LKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDV 204
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ SI+ + + GL ++ I+ + EM G+ P +LKAC + + +
Sbjct: 205 VCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGE-SGHKKLGTCVHV 263
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
D+ V S++DMY GD E A VF+ M R + SWN+M+S V NG+
Sbjct: 264 FVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPE 323
Query: 187 AVEV----------------------------LESMRV-------DGCEPDVVTRNTVMD 211
+ + LE+ +V G E ++V ++D
Sbjct: 324 SFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVD 383
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + +AS VF ++ NVI+WT ++ G S G +L +F M + V ++
Sbjct: 384 MYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEEN-VAANSV 442
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L ++ C LG+L G+ +HG+ ++ G F +AL+ +YA+
Sbjct: 443 TLVSLVHCCAHLGSLKKGRSVHGHLIR--HGYEFNAVNMSALIDMYAK 488
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 41/319 (12%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
S +L K +H ++ + + + F TKLI+IY++ L A+ +F Q P ++
Sbjct: 50 SNTLIDVKSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAM 109
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ ++ ++ + + M + + + Y LKAC LL+
Sbjct: 110 MGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACT---VLLDDEVGMELVRMAVR 166
Query: 133 XXXDLR--VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
L V +S+++ KCG++ A VFD M ERDV WNS++ YV GL + +++
Sbjct: 167 KGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQL 226
Query: 191 LESMRVDGCEP-----------------------------------DVVTRNTVMDAYCR 215
M G P DV +++D YC
Sbjct: 227 FVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCN 286
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
+G A VF ++ ++ISW +ISG G S +F ++V G F D+G L
Sbjct: 287 VGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGF-DSGTLVS 345
Query: 276 VLVSCRCLGALASGKEIHG 294
++ C L +GK +H
Sbjct: 346 LIRGCSQTSDLENGKVLHA 364
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SL++ CS + L K LH ++ G +T ++ +Y+ C ++ A +FR +
Sbjct: 343 LVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTME 402
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV +T++L S++G A ++ + M+ + V+ + ++ CA L +L +
Sbjct: 403 KRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRS 462
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF-DEMRERDVFSWNSMMSCYVCN 181
+ + ++++DMY+KCG + A ++F + +DV NSM+ Y +
Sbjct: 463 VHGHLIRHGYEFNAVNM-SALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMH 521
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
G +A+ V + M + +P+ T +++ A GLV E +F
Sbjct: 522 GQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLF 566
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC S +H ++L G F T L+ +Y + D SA +F ++
Sbjct: 244 SILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSR 303
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ ++++ ++G+ + + ++ G D +++ C+Q + L E
Sbjct: 304 SLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDL-ENGKVL 362
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+L + +++DMYSKCG ++ A+ VF M +R+V +W +M+ NG +
Sbjct: 363 HACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYA 422
Query: 185 QRAVEVLESMRVD-----------------------------------GCEPDVVTRNTV 209
+ A+++ M+ + G E + V + +
Sbjct: 423 EGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSAL 482
Query: 210 MDAYCRMGLVSEASKVFE---QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+D Y + G + A K+F +KD VI ++I GY G+ +L ++ M+ D +
Sbjct: 483 IDMYAKCGKIHSAEKLFYNGFHLKD--VILCNSMIMGYGMHGQGHQALRVYDRMI-DERL 539
Query: 267 FPDAGALSGVLVSCRCLGALASGKEI 292
P+ +L +C G + G+ +
Sbjct: 540 KPNQTTFVSMLTACSHSGLVEEGRTL 565
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 39/333 (11%)
Query: 21 QLHHYMLLHGSHRK-PFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
Q+H ++ HG P F + LI +Y+ LR A +F ++ + + S++A + R+
Sbjct: 215 QVHAMVVKHGFEEAIPVFNS-LISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G + E + +M+ GV P F V+K+CA L L D V
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE-LALVKLMQCKALKSGFTTDQIV 332
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+++ SKC +++ A +F M E ++V SW +M+S + NG + +AV + MR +G
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 199 CEPDVVTRNTV-------------------------------MDAYCRMGLVSEASKVFE 227
+P+ T + + +DAY ++G +A KVFE
Sbjct: 393 VKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFE 452
Query: 228 QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
I+ ++++W+ +++GY+ G + +F +++ +G + P+ S V+ +C A A
Sbjct: 453 IIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG-IKPNEFTFSSVINACASPTAAA 511
Query: 288 S-GKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
GK+ H Y +K+ S +AL+T+YA+
Sbjct: 512 EQGKQFHAYAIKMRLNNALCVS--SALVTMYAK 542
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
++H ++ R T L+ Y + A +F + ++ A++++LA +++ G
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
+ + + ++ +G+ P+ + F V+ ACA A E L V
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVS 533
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
++++ MY+K G+++ A VF +ERD+ SWNSM+S Y +G +++A+EV + M+ +
Sbjct: 534 SALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMD 593
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLG 255
D VT V+ A GLV + K F I D P + ++ +I YS G ++G
Sbjct: 594 VDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMG 653
Query: 256 IFREM 260
I EM
Sbjct: 654 IINEM 658
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 147/328 (44%), Gaps = 43/328 (13%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M S++++C++ + L K + L G T L+ + C ++ A SLF
Sbjct: 296 MTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSL 355
Query: 61 LPQ-PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ + NV ++T++++ ++G Q + +++MR +GV P+ + + +L +
Sbjct: 356 MEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV----- 410
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
V ++LD Y K G+ A +VF+ + +D+ +W++M++ Y
Sbjct: 411 FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYA 470
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA--------------------------- 212
G ++ A ++ + +G +P+ T ++V++A
Sbjct: 471 QTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNAL 530
Query: 213 ---------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
Y + G + A +VF++ K+ +++SW ++ISGYS G+ +L +F EM
Sbjct: 531 CVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKR 590
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE 291
M DA GV+ +C G + G++
Sbjct: 591 NMDV-DAVTFIGVITACTHAGLVEKGQK 617
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 38/276 (13%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T L+ +Y +++ +F ++ + NV ++TS+LA +S +GL E + +M+++GV
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ Y V+ A ++ + V NS++ +YS+ G + A
Sbjct: 192 PNRYTVSTVIAALVN-EGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARD 250
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP----------------- 201
VFD+M RD +WNSM++ YV NG E+ M++ G +P
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 202 ------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLIS 242
D + +M A + + +A +F +++ NV+SWT +IS
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
G G + ++ +F +M +G V P+ S +L
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREG-VKPNHFTYSAILT 405
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 54 AHSLFRQLP-QPNVFAFTSILAF-HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
AH+LF ++P +P + L F +SR ++ + + + + PD V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A +L D + V S++DMY K +V RVFDEM ER+V S
Sbjct: 104 A--GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------ 212
W S+++ Y NGL E+ M+ +G P+ T +TV+ A
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221
Query: 213 -----------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
Y R+G++ +A VF++++ + ++W ++I+GY G+
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFE 281
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
IF +M G V P + V+ SC L LA K + LK
Sbjct: 282 IFNKMQLAG-VKPTHMTFASVIKSCASLRELALVKLMQCKALK 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 3 LNSLLQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+S++ AC S + + Q KQ H Y + + ++ L+ +YA ++ SAH +F++
Sbjct: 497 FSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQ 556
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++ ++ S+++ +S+HG A++ +E + EM+ + + D F V+ AC + +
Sbjct: 557 KERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQ 616
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ + ++D+YS+ G +E A + +EM
Sbjct: 617 KYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 16/280 (5%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSP 99
+I YA DL SA LF ++PQ + ++ S++A ++++G + + I+ + EM + P
Sbjct: 343 MISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
D V AC L L + V NS++ MYS+CG ++ A +
Sbjct: 403 DEVTMVSVFSACGHLGEL-GLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLI 461
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F EM RD+ S+N+++S + +G ++E+L M+ DG EPD +T ++ A GL+
Sbjct: 462 FQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLL 521
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
E ++FE IK P+V + +I GR ++ + + M + P AG +L +
Sbjct: 522 GEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME----PHAGIYGSLLNA 577
Query: 280 CRC-----LGALASGK----EIHGYGLKIMPGEIFYRSAG 310
LG LA+ K E H G ++ I Y SAG
Sbjct: 578 TSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNI-YASAG 616
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 15/276 (5%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS----LFRQLPQPNVFAFT 70
+L++ +QLH ++ H H + + L+ C L + S +F P+V FT
Sbjct: 15 NLHRLRQLHAQLVHHSLHHQNHWVVLLL---TQCTRLLAPSSYTCHIFHAATHPDVRVFT 71
Query: 71 SILAFHSRHGLARQC-IETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
+L ++S+ G+ Q + + M R + P+ + ++K+ + L
Sbjct: 72 FMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLF------LAHV 125
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
D V N +L +Y+K G +E A ++FDEM +R V WN M+S Y G + A
Sbjct: 126 LKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 185
Query: 189 EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
+ M +V+T T++ + + G + A F+++ + +V+SW ++SGY+ G
Sbjct: 186 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGG 245
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
++ +F +M++ G V PD V+ SC LG
Sbjct: 246 APEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLG 281
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 72/346 (20%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+A L H M R T +I +A +L++A F ++P+ +V ++ ++L+ ++
Sbjct: 183 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA 242
Query: 78 RHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
+ G + I + +M G V PD + V+ +C+ L +
Sbjct: 243 QGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPN 302
Query: 137 LRVCNSVLDMYSKCGDVEGAARV----------------------------------FDE 162
V ++LDM++KCG++E A ++ FD+
Sbjct: 303 YFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDK 362
Query: 163 MRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGCEPDVVTR--------------- 206
M +RD SWNSM++ Y NG S +A+++ E M + +PD VT
Sbjct: 363 MPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGL 422
Query: 207 --------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS 246
N+++ Y R G + +A +F+++ +++S+ TLISG++
Sbjct: 423 GNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAE 482
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
G S+ + +M DG + PD +L +C G L G+ +
Sbjct: 483 HGHGMESIELLLKMKEDG-IEPDRITYIAILTACSHAGLLGEGQRL 527
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 155/325 (47%), Gaps = 21/325 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH------S 56
L SLL C+ + L KQ+H ++ + G H PFF KL+ +C S H
Sbjct: 12 LLSLLSNCNTT--LKTTKQIHTHLYVTGLHTHPFFFGKLL---LNCAVSISDHVLNYSLR 66
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLA 115
LF P P+ F + +++ S ++ + ++ R + PD + F LK A
Sbjct: 67 LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ V +++ MY++CG E A +VFDEM + +V +WN+++
Sbjct: 127 CSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186
Query: 176 S-CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+ C+ C G + A + E M V ++ + NT++ Y + G + A +VF ++K +
Sbjct: 187 TACFRC-GDVEGAWGLFERMPVR----NLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDD 241
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
SW+T+I G++ G + G F+E++ D P +L+GVL +C GA GK +HG
Sbjct: 242 ASWSTMIVGFAKSGSFHDAFGFFKELLRDRNR-PSEVSLTGVLSACAQAGAFEFGKILHG 300
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
+ K G + S AL+ Y++
Sbjct: 301 FMEK--AGFLCIVSVNNALIDTYSK 323
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 73/338 (21%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT---- 70
S Q QLH + HG F T LI +YA+C A +F ++ QPNV A+
Sbjct: 128 SKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVT 187
Query: 71 ---------------------------SILAFHSRHGLARQCIETYAEMRFK-------- 95
++LA + + G + EM+ +
Sbjct: 188 ACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTM 247
Query: 96 -------GVSPDGYVFPK----------------VLKACAQLAALLEXXXXXXXXXXXXX 132
G D + F K VL ACAQ A E
Sbjct: 248 IVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAF-EFGKILHGFMEKAG 306
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVL 191
+ V N+++D YSKCG+V+ A VF M E+ + SW SM++ +G + A+ V
Sbjct: 307 FLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVF 366
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSS 246
M G PD VT +++ A GLV + +F +++ +P + + ++ Y
Sbjct: 367 HEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGR 426
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
R + R+M + P+ +L +C G
Sbjct: 427 AARLQKAYEFIRQMP----ILPNVIIWRTLLGACSIHG 460
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 149/333 (44%), Gaps = 42/333 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L ++C+ S+ LH ++ G F T L+ +Y+ C + SA +F ++P+ +
Sbjct: 16 LFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERS 75
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA----QLAALLEXX 121
V ++ S+++ + + + + EM G P F +L + L +
Sbjct: 76 VVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGM 135
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ + NS++ MY++ G ++ A +VFD M E+ + SW ++M YV
Sbjct: 136 SMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKV 195
Query: 182 GLSQRAVEVLESMR--------------VDGC----------------------EPDVVT 205
G S AV++ M+ V GC E D +
Sbjct: 196 GSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSI- 254
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+N ++ Y R G ++ A +F+ I +V+SWT++I+GY+ R +L +FR MV
Sbjct: 255 KNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTE- 313
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ P+ L+ VL +C LG+L G+EI Y +
Sbjct: 314 IKPNRATLATVLSACADLGSLCIGEEIEQYAFE 346
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 11/303 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L+ C + A +H +L G H + L+ +YA C +L SA +F + +
Sbjct: 222 NLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRK 281
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++TS++A ++ ++ ++ + M + P+ VL ACA L +L
Sbjct: 282 SVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLC-IGEEI 340
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL+V S++ MYSKCG++ A VF+ + +D+ W+SM++ Y +G+
Sbjct: 341 EQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMG 400
Query: 185 QRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
A+ + E M + +PD + +++ A GL+ + K F+ ++ P +T
Sbjct: 401 NEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYT 460
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
L+ + VG+ ++L M D A ALS +L +CR G + G+ + L
Sbjct: 461 CLVDLLARVGQLDLALDTIEAMPTD----VQAEALSPLLSACRIHGNIELGELVAAKLLD 516
Query: 299 IMP 301
+ P
Sbjct: 517 VSP 519
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M V + + +P + K+CA L ++ D V S++DMYSKC
Sbjct: 1 MHHSSVHGNTFTYPLLFKSCANLLSI-PHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCS 59
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP---------- 201
+E A +VFDEM ER V SWNS++S Y + ++A+ +++ M V G +P
Sbjct: 60 VIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILS 119
Query: 202 ------------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+V N++M Y + G + EA KVF+ + +
Sbjct: 120 GYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDE 179
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
++SWTT++ GY VG ++ +F EM + + D ++ C L
Sbjct: 180 KTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGL-DFIVFVNLVSGCIQLREQLLASS 238
Query: 292 IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+H LK E S LLT+YAR
Sbjct: 239 VHSLVLKCGCHE--EDSIKNLLLTMYAR 264
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 158/351 (45%), Gaps = 44/351 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L + CS +L + QLH ++++ H P +TKL++ Y+ L+S+ +F P P+
Sbjct: 7 LFRTCS---TLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPD 63
Query: 66 VFAFTSILAFHSRHGLARQCIETY---AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
F F+ ++ H + L R+ + + +M K +++P V++A + L+
Sbjct: 64 SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELI-VGR 122
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + S++ MY + + A +VFDEM RD+ W+S++SCYV NG
Sbjct: 123 KLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENG 182
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
+ + +E+ SM +G PD V N
Sbjct: 183 VYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSN 242
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + G + A ++FE I D + WT++IS Y+ +L +F +M D V
Sbjct: 243 SLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKM-QDSEVE 301
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
P+ + VL SC LG L GK +H + L+ G + G AL+ Y+
Sbjct: 302 PNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMG-VTGLDLGPALIDFYS 351
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 35/325 (10%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+ +AC L AK +H Y++ G + LI +Y+ C L A LF +
Sbjct: 206 LLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECID 265
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +TS+++ ++++ + ++ + +M+ V P+ VL +CA+L L E
Sbjct: 266 DRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKS 325
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L + +++D YS C + ++ + ++ SWN+++S Y G
Sbjct: 326 VHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREG 385
Query: 183 LSQRAVEVLESMRVDGCEPDV----------------------------------VTRNT 208
L+ A+ M G PD +N+
Sbjct: 386 LNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNS 445
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+MD Y + G S A +F +IK ++++W +I G+S G +L +F EM + +
Sbjct: 446 LMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEIN 505
Query: 269 DAGALSGVLVSCRCLGALASGKEIH 293
LS + +C LG L GK IH
Sbjct: 506 KVTFLSAIQ-ACSNLGYLDKGKWIH 529
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 160/351 (45%), Gaps = 41/351 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++A + L ++LH +L G T L+ +Y + LR A +F ++
Sbjct: 107 SVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVR 166
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++SI++ + +G+ R+ +E + M +G+ PD + V +AC ++ L
Sbjct: 167 DLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCL-RLAKSV 225
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D + NS++ MYS+CG + A R+F+ + +R W SM+S Y N
Sbjct: 226 HGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECF 285
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA---------------------- 222
+ A++V M+ EP+ VT +V+++ R+G + E
Sbjct: 286 EEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPA 345
Query: 223 --------------SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
K+ I + N++SW TLIS Y+ G + ++ F MV G + P
Sbjct: 346 LIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKG-IMP 404
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D+ +L+ + + G++ G++IHG+ +M F +L+ +Y++
Sbjct: 405 DSFSLASSISASASSGSIQFGQQIHGH---VMKRGFFDEFVQNSLMDMYSK 452
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 131/274 (47%), Gaps = 13/274 (4%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
+Q+H +++ G + F L+ +Y+ C SA+++F ++ ++ A+ ++ S+
Sbjct: 425 GQQIHGHVMKRGFFDE-FVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQ 483
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+G++ + + + EM + + F ++AC+ L L+ DL
Sbjct: 484 NGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLG-YLDKGKWIHHKIIVTGNQNDLY 542
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ +++DMY+KCGD++ A +VFD + E+ V SW++M++ + +G A + M +
Sbjct: 543 IDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSN 602
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVS 253
+P+ VT ++ A G V E F ++D PNV + +++ S G +
Sbjct: 603 IKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGA 662
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVS-CRCLGAL 286
I + + P A ++ G L++ CR G +
Sbjct: 663 YEIIKSIRT-----PVAASIWGALLNGCRIYGRM 691
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S +QACS L++ K +HH +++ G+ + T L+ +YA C DL++A +F + +
Sbjct: 511 SAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEK 570
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++++++A H HG + +M + P+ F +L AC ++ E
Sbjct: 571 SVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYF 630
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
++ S++D+ S+ GD+ GA + +R
Sbjct: 631 NTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIR 670
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 152/352 (43%), Gaps = 43/352 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD-CDDLRSAHSLFRQL 61
L +Q C+ +S KQ+H +L TK + D+R + +Q
Sbjct: 12 LLDFIQRCNDLRSF---KQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQF 68
Query: 62 PQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ F I++ + I Y + G PD Y P VLK+CA+ + + E
Sbjct: 69 DWSFSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAE- 127
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V NS + +YS CGD GA++VFD M RDV SW ++S Y+
Sbjct: 128 VKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMK 187
Query: 181 NGLSQRAVEVLESMRVD----------------GC----------------EPDVVTRNT 208
GL AV + M V GC ++V NT
Sbjct: 188 AGLFNDAVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNT 247
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+MD Y + V++A ++F++I + +++SWT++ISG SL +F EM+ G P
Sbjct: 248 LMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFE-P 306
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR-SAGAALLTLYAR 319
D L+ VL +C LG L G+ +H Y I I + G +L+ +YA+
Sbjct: 307 DGVILTSVLSACASLGLLDYGRWVHEY---IDHSRIKWDVHIGTSLIDMYAK 355
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%), Gaps = 3/235 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC LN K +H + + ++ + L+ +Y C+ + A LF ++P+
Sbjct: 212 SILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEK 271
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++TS+++ ++ ++ ++ + EM G PDG + VL ACA L LL+
Sbjct: 272 DIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLG-LLDYGRWV 330
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + S++DMY+KCG +E A ++F+ + +++ +WN+ + NG
Sbjct: 331 HEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHG 390
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP--NVISW 237
Q A++ + G P+ +T V A C GLV E F+Q+ P N+ W
Sbjct: 391 QEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPW 445
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 10/249 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L++C+ + + KQ+H + F + +Y+ C D A +F +P
Sbjct: 114 AVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVR 173
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++T +++ + + GL + + M V+P+ F +L AC +L L
Sbjct: 174 DVVSWTGLISGYMKAGLFNDAVALFLRMD---VAPNAATFVSILGACGKLGCL-NLGKGI 229
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+L V N+++DMY KC V A R+FDE+ E+D+ SW SM+S V
Sbjct: 230 HGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCP 289
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW-----TT 239
Q ++++ M G EPD V +V+ A +GL+ V E I D + I W T+
Sbjct: 290 QESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYI-DHSRIKWDVHIGTS 348
Query: 240 LISGYSSVG 248
LI Y+ G
Sbjct: 349 LIDMYAKCG 357
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%), Gaps = 17/281 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-- 98
+I YA DL SA LF ++PQ + ++ S++A ++++G + + I+ + EM S
Sbjct: 328 MISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRK 387
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD V AC L L + V NS+++MYS+CG ++ A
Sbjct: 388 PDEVTMVSVFSACGHLGEL-GLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVL 446
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
+F EM RD+ S+N+++S + +G ++E+L M+ DG EPD +T ++ A GL
Sbjct: 447 IFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGL 506
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
+ E ++FE IK P+V + +I GR ++ + + M + P AG +L
Sbjct: 507 LDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME----PHAGIYGSLLN 562
Query: 279 SCRC-----LGALASGK----EIHGYGLKIMPGEIFYRSAG 310
+ LG LA+ K E H G + I Y SAG
Sbjct: 563 ATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNI-YASAG 602
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 73/347 (21%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+A L H M R T +I +A +L++A F ++P+ +V ++ ++L+ ++
Sbjct: 168 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA 227
Query: 78 RHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
+ G + I + +M G V PD + V+ +C+ L +
Sbjct: 228 QGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPN 287
Query: 137 LRVCNSVLDMYSKCGDVEGAARV----------------------------------FDE 162
V ++LDM++KCG++E A ++ FD+
Sbjct: 288 YFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDK 347
Query: 163 MRERDVFSWNSMMSCYVCNGLSQRAVEVLESM--RVDGCEPDVVTR-------------- 206
M +RD SWNSM++ Y NG S +A+++ E M D +PD VT
Sbjct: 348 MPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELG 407
Query: 207 ---------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
N++++ Y R G + +A +F+++ +++S+ TLISG++
Sbjct: 408 LGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFA 467
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
G S+ + +M DG + PD +L +C G L G+ +
Sbjct: 468 EHGHGMESIELLSKMKEDG-IEPDRITYIAILTACSHAGLLDEGQRL 513
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 20/282 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLLQ C L H+ L H +H T+ + A + H +F P
Sbjct: 3 SLLQLCIV---------LVHHSLHHQNHWVVLLLTQCTRFLAPSS--YTCH-IFHAATHP 50
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFK--GVSPDGYVFPKVLKACAQLAALLEXXX 122
+V FT +L ++S+ G+ Q + + + + P+ + ++K+ + L
Sbjct: 51 DVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLF---- 106
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N +L +Y+K G +E A ++FDEM +R V WN M+S Y G
Sbjct: 107 --LAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCG 164
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ A + M +V+T T++ + + G + A F+++ + +V+SW ++S
Sbjct: 165 NEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLS 224
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
GY+ G ++ +F +M++ G V PD + V+ SC LG
Sbjct: 225 GYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG 266
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S +Q C+ + + Q KQLH F TKLI YA + +R+A ++F ++P
Sbjct: 54 SAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHK 113
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAAL-LEX 120
N F++ S++ ++ L + +A VSPD + +LK A +++ +
Sbjct: 114 NSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKS 173
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V N+++ Y +CG +E A +VFDEM ERD+ +WN+M+ Y
Sbjct: 174 AKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQ 233
Query: 181 NGLSQR--------------------------------------AVEVLESMRVDGCEPD 202
+G + +EV M+ DG E D
Sbjct: 234 SGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETD 293
Query: 203 VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
V N ++ Y + G ++ A ++F+++ + + +S+ ++ISGY G +L + + + N
Sbjct: 294 VFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIEN 353
Query: 263 DGM-VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
G+ + D + G++ + + AL +E+ G+GL + P
Sbjct: 354 PGLSTWND--VIPGMVQNNQFERALDLVREMPGFGLNLKP 391
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 152/351 (43%), Gaps = 75/351 (21%)
Query: 3 LNSLLQACSASKSL--NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ S+L+ + S S+ AKQ+H LL G + L+ Y C + A +F +
Sbjct: 156 MTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDE 215
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAAL 117
+ + ++ + +++ +S+ G +C Y EM KG+ P+ V++AC Q +
Sbjct: 216 MTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQ-SKD 274
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ +CN+++ MY+KCG + A +FDEM E+D S+ S++S
Sbjct: 275 LSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISG 334
Query: 178 YVCNGLSQRAVEVLESMRVDG---------------------------------CEPDVV 204
Y+ NG A++VL+ + G +P+VV
Sbjct: 335 YMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVV 394
Query: 205 TRNTVM--------------------------DAYCRMGLVSEASK---------VFEQI 229
T ++++ + Y +V +K VF+Q
Sbjct: 395 TLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQS 454
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ ++I WT++I Y+S G ++LG++ +M++ G + PD L+ VL +C
Sbjct: 455 QSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRG-IQPDPVTLTSVLTAC 504
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 32/256 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S++QAC SK L+ ++H +M G F +I +YA C L A LF ++
Sbjct: 262 IGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMG 321
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL----- 117
+ + ++ SI++ + +G + ++ + G+S V P +++ AL
Sbjct: 322 EKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVRE 381
Query: 118 ---------------------------LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
L ++ V +++D Y+K
Sbjct: 382 MPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKL 441
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G + A RVFD+ + R + W S++ Y +G + A+ + M G +PD VT +V+
Sbjct: 442 GFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVL 501
Query: 211 DAYCRMGLVSEASKVF 226
A GLV+EA VF
Sbjct: 502 TACAHSGLVNEAWDVF 517
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 15/267 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S++ S +L K++H Y + + + T ++ YA + A +F Q
Sbjct: 396 LSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQ 455
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ +TSI+ ++ HG A + Y +M +G+ PD VL ACA + E
Sbjct: 456 SRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWD 515
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM---SCY 178
+ ++ + S+ G + A + +M E W +++ S Y
Sbjct: 516 VFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIY 575
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNVISW 237
+ + A + L + EP+ +M + Y R G EA K+ E+++ +
Sbjct: 576 DDVEIGKFACDHLFEI-----EPEHTGNYIIMANLYSRAGRWEEARKIRERMEK----TG 626
Query: 238 TTLISGYSSVGRHGVSLG-IFREMVND 263
+ I G S + G LG I ++M N+
Sbjct: 627 SPKIRGSSWIETSGKLLGFIAKDMSNE 653
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 71/355 (20%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD--DLRSAHSLFRQLP 62
SLL+ CS ++ + KQ+H +L G+ R ++L+ YA + +L A +F ++
Sbjct: 16 SLLERCS---NIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRIS 72
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX-- 120
PN + +++ +S + + Y +M + + Y FP +LKAC+ L+AL E
Sbjct: 73 SPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQ 132
Query: 121 ----------------------------XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
D+ N+++D Y KCG+
Sbjct: 133 IHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGN 192
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------- 205
VE A ++F M E++V SW SM+ +V G+ + A+ +L+ M V G +PD +T
Sbjct: 193 VEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSA 252
Query: 206 ------------------RNTV----------MDAYCRMGLVSEASKVFEQIKDPNVISW 237
+N + +D Y + G + +A VF +++ V +W
Sbjct: 253 CAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTW 312
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
T +I G++ G+ +L F +M G + P + + VL +C G + GK +
Sbjct: 313 TAIIGGFAVHGKGSEALDWFTQMQKAG-IKPTSFTFTAVLTACSHTGLVEEGKSL 366
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 41/332 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF------- 58
LL+ACSA +L + Q+H ++ G + + T L+++YA ++SAH LF
Sbjct: 117 LLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRD 176
Query: 59 ------------------------RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
+ +P+ NV ++TS++ R G+ ++ + +M
Sbjct: 177 IVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLV 236
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G+ PD L ACA L AL E D + +++DMY KCG+++
Sbjct: 237 AGIKPDKITLSCSLSACAGLGAL-EQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMK 295
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A VF ++ ++ V++W +++ + +G A++ M+ G +P T V+ A
Sbjct: 296 KALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACS 355
Query: 215 RMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
GLV E +FE + P + + ++ +GR G L +E V + P+
Sbjct: 356 HTGLVEEGKSLFESMSTFYNMKPVMEHYGCMV---DLLGRAGF-LKEAKEFVESMPIKPN 411
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
A +L +C L GKEI + +++ P
Sbjct: 412 AAIWGSLLNACHLHKHLELGKEIGKFLIELDP 443
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIY---ADCDDLRSAHSLFRQ 60
L Q + +K+++ KQ+H L H P FF L ++ A+ +L AH LF
Sbjct: 13 LNQFLNNAKNISHLKQIHALFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLFDT 72
Query: 61 LPQ-PNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+P N F +TS++ AF S H R CI T+A M KG+ P G+ F VL AC ++ A+
Sbjct: 73 MPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVF 132
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E + V ++LDMY+KCG V A VFD M +RDV +W +M+ Y
Sbjct: 133 EGKQVHARLVQSGFLGNKI-VQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGY 191
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
G A + ++M E + T T++ Y G + A ++++ + ++W
Sbjct: 192 AKAGRMVDARLLFDNMG----ERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWV 247
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
+I+GY +G + IF E+
Sbjct: 248 AMIAGYGKLGNVSEARRIFDEI 269
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 129/269 (47%), Gaps = 11/269 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP 99
+I Y ++ A +F ++P P N ++LA ++++G AR+ IE Y +MR +
Sbjct: 249 MIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKV 308
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ ACAQL + + V N+++ M SKCG+++ A R
Sbjct: 309 TDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHI-VSNALIHMQSKCGNIDLAWRE 367
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F+ MR RD++++++M++ + +G SQ A+++ M+ +G P+ VT V++A GL+
Sbjct: 368 FNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLI 427
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F+ + +P +T ++ +GR G L ++ + DA
Sbjct: 428 EEGCRFFQIMTGVYGIEPLPEHYTCMV---DLLGRAG-QLEKAYSLIKENSTSADATTWG 483
Query: 275 GVLVSCRCLGALASGKEIHGYGLKIMPGE 303
+L +CR G + G+ + +I P +
Sbjct: 484 SLLAACRVYGNVELGEIAARHLFEIDPTD 512
>Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36615461-36616774 | 20130731
Length = 316
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL C +SK++N K +H + G F TKL+ YA C L A+ LF +
Sbjct: 13 TLLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRK 72
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
F + S++ + L ++ + + EMR D + P VLK+CA L+A L
Sbjct: 73 PTFLYNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSA-LRLGKQV 131
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL+ N++++MY+KCG++E A +VFD M ER+ +W++MM+ Y +G
Sbjct: 132 HGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAGYGMHGRF 191
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ E+ M G D V+ V+ A G V + ++FE +K P+V +T
Sbjct: 192 EEVFEMFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTC 251
Query: 240 LISGYSSVG 248
++ VG
Sbjct: 252 MVDMLGRVG 260
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 147 YSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR----------- 195
Y+ C + A +F + F +NS++ Y+ L + + + MR
Sbjct: 53 YASCSKLHQANILFSFTNRKPTFLYNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTL 112
Query: 196 ------------------------VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
V+G D+ N +++ Y + G + A KVF+ + +
Sbjct: 113 PLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCE 172
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
N ++W+T+++GY GR +F MV G D + + VL +C G + G+E
Sbjct: 173 RNEVTWSTMMAGYGMHGRFEEVFEMFNRMVEVGERM-DNVSFTVVLTACSHGGFVEKGRE 231
Query: 292 I 292
I
Sbjct: 232 I 232
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 10/295 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L+AC+ L + K+LH +M+ G LI +YA C + +A ++
Sbjct: 315 LATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMI 374
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++++I++ ++G A + + + +M+ G++P +L AC+ LAAL +
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAAL-QHGT 433
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D +CN+++DMYSKCG + + +FD M+ RD+ SWN+M+ Y +G
Sbjct: 434 CCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHG 493
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
L A+ + + ++ G +PD VT V+ A GLV+E F + P + +
Sbjct: 494 LCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHY 553
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++ + G + + M P+ +L +CR + G+++
Sbjct: 554 ICMVDLLARAGNLDEAYTFIQRMP----FVPNVRIWGALLAACRTHKNIEMGEQV 604
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 147/318 (46%), Gaps = 40/318 (12%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T+L + + ++++ A +F Q+P+P+V + ++ ++ G +Q I Y M GV+
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P + FP +LKAC+ L A L+ DL V ++L MY+KCG + A
Sbjct: 105 PTNFTFPFLLKACSSLQA-LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 159 VFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP--------------- 201
+F+ + ++RD+ +WN+M++ + + L + + + M+ G P
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 202 --------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
+VV + ++D Y + L+ A K+F + N + W+ +I
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
GY +L ++ +M+ + P L+ +L +C L L GK++H + +K
Sbjct: 284 GGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIK--S 341
Query: 302 GEIFYRSAGAALLTLYAR 319
G + G +L+++YA+
Sbjct: 342 GMDLDTTVGNSLISMYAK 359
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 44/327 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L + +L+Q K +H Y + + T L+ +YA C L A +F +
Sbjct: 213 LVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN 272
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ N +++++ + H + Y +M G++P +L+ACAQL L+
Sbjct: 273 KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD-LKRG 331
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D V NS++ MY+KCG ++ A DEM +D S+++++S V N
Sbjct: 332 KKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN 391
Query: 182 GLSQRAVEVLESMRVDGCEP-----------------------------------DVVTR 206
G +++A+ + M+ G P D
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC 451
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV---SLGIFREMVND 263
N ++D Y + G ++ + ++F+++++ ++ISW T+I GY G HG+ +L +F+E+
Sbjct: 452 NAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGY---GIHGLCVEALSLFQELQAL 508
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGK 290
G+ PD L VL +C G + GK
Sbjct: 509 GLK-PDDVTLIAVLSACSHSGLVTEGK 534
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 144/328 (43%), Gaps = 40/328 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP- 64
LL+ACS+ ++L + +H + + G + +T L+ +YA C L A +LF +
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ A+ +++A S H L Q I + A+M+ GV+P+ +L Q A L
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ-ANALHQGKA 231
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN-- 181
++ + ++LDMY+KC + A ++F+ + +++ W++M+ YV +
Sbjct: 232 IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDS 291
Query: 182 ---------------GLSQRAVEVLESMRV-------------------DGCEPDVVTRN 207
GL+ + +R G + D N
Sbjct: 292 ISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGN 351
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + G++ A +++ + +S++ +ISG G +L IFR+M + G+
Sbjct: 352 SLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA- 410
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGY 295
P + +L +C L AL G HGY
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGY 438
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 47/347 (13%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L + KQLH +++ G + +++ +Y C + A LF +LP NV ++ ++
Sbjct: 76 LPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA 135
Query: 76 ------HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+ R C + M + + PD F ++ C Q + E
Sbjct: 136 SVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDI-EMGVQLHCFTV 194
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
D V +++ +Y+KCG VE A RVF ++ RD+ WN M+SCYV N L + A
Sbjct: 195 KVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFR 254
Query: 190 VLESMRVD-------------------------------------GCEPDVVTRNTVMDA 212
V SMR+D + DV+ + +++
Sbjct: 255 VFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINM 314
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + + +A +VF+++ NV++W T+I G+ + G + + +EM+ +G + PD
Sbjct: 315 YAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFL-PDELT 373
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+S ++ SC A+ ++H + +K+ + + S +L++ Y++
Sbjct: 374 ISSIISSCGYASAITETLQVHAFAVKLSCQD--FLSVANSLISAYSK 418
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N L+ C+ + QLH + + G F L+ +YA C + +A +F +
Sbjct: 170 FNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVS 229
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA-ALLEXX 121
++ + +++ + + L + + MR V+ D + F +L + A +
Sbjct: 230 CRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFG 289
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V +++++MY+K ++ A RVFDEM R+V +WN+M+ + +
Sbjct: 290 KQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNH 349
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
G +++++ M +G PD +T
Sbjct: 350 GDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVA 409
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N+++ AY + G ++ A K FE P++++WT+LI Y+ G S +F +M++ G +
Sbjct: 410 NSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG-I 468
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
PD A GVL +C G + G +H + L
Sbjct: 469 KPDRIAFLGVLSACAHCGLVTKG--LHYFKL 497
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 10/268 (3%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
KQ+H +L + LI +YA +++ A +F ++ NV A+ +++
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
HG + ++ EM +G PD ++ +C +A+ E L
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDF-LS 407
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V NS++ YSKCG + A + F+ + D+ +W S++ Y +GL++++ E+ E M G
Sbjct: 408 VANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG 467
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVS 253
+PD + V+ A GLV++ F+ + + P+ +T L+ +GR+G+
Sbjct: 468 IKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLV---DLLGRYGLI 524
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCR 281
F E++ + D+ L + SC+
Sbjct: 525 NEAF-EILRSMPIEVDSDTLGAFIGSCK 551
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 146/350 (41%), Gaps = 43/350 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF-RQLPQP 64
LL A ++ Q+H ++++ + P +T I+ + + +LF L P
Sbjct: 23 LLSALESTTGTQHFNQIHTQLIINNLIQHPLLSTTAIKKLSSHPRTTPSSALFFDHLHHP 82
Query: 65 NVFAFTSILAFHSRHGLARQCIE-TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ F +I+ + R Y M K V P+ Y FP +LK C LE
Sbjct: 83 DAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHGCKLEGEKG 142
Query: 124 XXXXXX------------------------------XXXXXXDLRVCNSVLDMYSKCGDV 153
DL N+++D Y K G +
Sbjct: 143 HARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGI 202
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
A ++FDEM ERDVFSWN M++ YV G A E+ E+M DVV+ N ++D
Sbjct: 203 RDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMP----NKDVVSWNCMIDGC 258
Query: 214 CRMGLVSEASKVFEQIKD---PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
R+G VS A + F Q+ NV+SW +L++ + + +G L +F M+ G P+
Sbjct: 259 VRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNE 318
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS-AGAALLTLYAR 319
L VL +C LG L G +H Y I EI LLT+YA+
Sbjct: 319 ATLVSVLTACANLGKLNLGLWVHSY---IKSNEIKLDVLLETCLLTMYAK 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXX 123
NV ++ S+LA H R +C+ + M G + P+ VL ACA L L
Sbjct: 281 NVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKL-NLGLW 339
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ + +L MY+KCG ++ A+ VF EM + + SWNSM+ Y +G
Sbjct: 340 VHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGN 399
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+A+E+ M G +P+ T V+ A G+V E F+ ++
Sbjct: 400 GDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMR 446
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ LN +H Y+ + T L+ +YA C + A +F ++P
Sbjct: 321 LVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMP 380
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
++ ++ S++ + HG + +E +AEM G P+ F VL AC+ ++E
Sbjct: 381 VKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVME 437
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 37 FTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
TT LI+ Y D AH+LF ++P +V A+TS++ ++ + + M G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
V P+ + VLKAC L ALL + V N+++DMY+ C D
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 157 AR-VFDEMRERDVFSWNSMMSCYVCN---------------------------------- 181
AR VF+++ ++ SW ++++ Y
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACAS 222
Query: 182 -GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
G S +V ++ G E ++ N ++D YCR SEA ++F ++ + I+W TL
Sbjct: 223 IGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTL 282
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
I+G+ ++ + SL IF +MV++G P+ + V+ +C L L G+++HG
Sbjct: 283 IAGFETLDSYE-SLCIFSQMVSEGFS-PNCFTFTSVIAACANLAILYCGQQLHG 334
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+ AC++ S N KQ+H ++ HG ++ +Y C A LF ++ Q +
Sbjct: 217 VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDT 276
Query: 67 FAFTSILA-FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +++A F + CI +++M +G SP+ + F V+ ACA LA +L
Sbjct: 277 ITWNTLIAGFETLDSYESLCI--FSQMVSEGFSPNCFTFTSVIAACANLA-ILYCGQQLH 333
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L + N+++DMY+KCG+V + ++F MR ++ SW SMM Y +G +
Sbjct: 334 GGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGK 393
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
AV++ M G +PD + V+ A GLV E + F
Sbjct: 394 EAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYF 434
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 141/324 (43%), Gaps = 40/324 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-TKLIQIYADC-DDLRSAHSLFRQ 60
++++L+AC + K+L K +H + G+ + L+ +YA C D + +A +F
Sbjct: 110 VSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFED 169
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ N ++T+++ ++ A + + +M + + F + ACA + +
Sbjct: 170 IGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS-NL 228
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+L V N++LDMY +C A ++F EM ++D +WN++++ +
Sbjct: 229 GKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFET 288
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
S ++ + M +G P+ T
Sbjct: 289 LD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLEL 347
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N ++D Y + G V+++ K+F ++ N++SWT+++ GY + G ++ +F EMV G
Sbjct: 348 SNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSG- 406
Query: 266 VFPDAGALSGVLVSCRCLGALASG 289
+ PD VL +C G + G
Sbjct: 407 IKPDKIVFMAVLSACSHAGLVDEG 430
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S++ AC+ L +QLH ++ G + LI +YA C ++ +H +F +
Sbjct: 313 FTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMR 372
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ ++TS++ + HG ++ ++ + EM G+ PD VF VL AC+ + E
Sbjct: 373 HTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLR 432
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
D + V+D+ S+ G V+ A + + M + D W +++ C
Sbjct: 433 YFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLG--ACK 490
Query: 182 GLSQRAVEVLESMRVDGCEPD 202
Q +++ L +++V +P+
Sbjct: 491 KYKQPSIQKLAALKVLEMKPN 511
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ +Y G EA +F+++ +VI+WT++I+GY+S H + +F M+ DG V P
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG-VKP 105
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYA 318
+A +S VL +C+ L AL GK +HG +KI G Y AL+ +YA
Sbjct: 106 NAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIY--VDNALMDMYA 154
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 38/317 (11%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLPQPNVFAFT 70
S ++ KQ+H M++ F T++L +A +L A +F L +PN F +
Sbjct: 49 STTIQHLKQIHAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWN 108
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
+++ H + + Y +MR GV P + FP +LKAC+ L+ +L
Sbjct: 109 TLIRAHQQQQ-PHISLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVK 167
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
D V N ++ YS GD+ A VFDE+ +++ W +M+ Y N A+++
Sbjct: 168 FGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDL 227
Query: 191 LESMRVDGCEPDVVTRNTVMDA-----------------------------------YCR 215
E M V G EP+ T +V+ Y +
Sbjct: 228 FERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAK 287
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G + A K+F+++ + NV++W +I G +S G +LG+F M + +V P+A G
Sbjct: 288 NGDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVG 347
Query: 276 VLVSCRCLGALASGKEI 292
VL +C G + G+E+
Sbjct: 348 VLSACCHAGLIDVGREV 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 14/284 (4%)
Query: 6 LLQACSA-SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
LL+ACS+ S L KQ+H +++ G L++ Y+ DL A +F ++P
Sbjct: 144 LLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMK 203
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ +T+++ ++++ + ++ + M G P+G VL CA+ + LE
Sbjct: 204 NLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCAR-SGCLELGERI 262
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + +++ MY+K GD+ A ++FDEM ER+V +WN+M+ +G
Sbjct: 263 HEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASHGHV 322
Query: 185 QRAVEVLESMRVDG-CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+ A+ + E M+ + P+ VT V+ A C GL+ +VF +K +P + +
Sbjct: 323 EDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYG 382
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCR 281
++ +GR G L E V GM + PD L +L + +
Sbjct: 383 CMV---DLLGRGGKLLE--AEEVIKGMPWKPDVVILGALLAASK 421
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L C+ S L +++H +M + G T L+ +YA D+ +A LF ++P
Sbjct: 243 LASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMP 302
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKAC 111
+ NV + +++ + HG + + M+ + V P+ F VL AC
Sbjct: 303 ERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSAC 352
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 163/358 (45%), Gaps = 46/358 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP- 64
LL+ C +K+ + K LHH + LI +Y+ +D +A S+F+ +
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXX 122
+V +++SI++ + + + +E + ++ + GV P+ Y F V++AC +
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSK---CGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V ++DM+ K D+E A +VFD+MRE++V +W M++
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237
Query: 180 CNGLSQRAVEV-LESMRVDGCEPDVVTRN------------------------------- 207
G + A+++ LE + G PD T
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297
Query: 208 ----TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY--SSVGRHGVSLGIFREMV 261
+++D Y + GLV EA KVF+ +++ NV+SWT L++GY G ++ +F M+
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G V P+ SGVL +C L G+++HG +K+ I G L+++YA+
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAI--DCVGNGLVSVYAK 413
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 40/322 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L L+ C+ + L+ K+LH +++ G L+ +YA C ++ A +F +
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR 324
Query: 63 QPNVFAFTSILAFHSRHG--LARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLE 119
+ NV ++T+++ + R G R+ + ++ M +G V+P+ + F VLKACA L
Sbjct: 325 EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----------- 168
D V N ++ +Y+K G +E A + FD + E+++
Sbjct: 385 GEQVHGQTIKLGLSAIDC-VGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443
Query: 169 ------------------------FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVV 204
F++ S++S C G + ++ + G D+
Sbjct: 444 KDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
N ++ Y + G A +VF ++D NVI+WT++I+G++ G +L +F M+ G
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG 563
Query: 265 MVFPDAGALSGVLVSCRCLGAL 286
V P+ VL +C +G +
Sbjct: 564 -VKPNDVTYIAVLSACSHVGLI 584
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 24/288 (8%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC++ + +Q+H + G L+ +YA + SA F L + N
Sbjct: 372 VLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKN 431
Query: 66 VFAFTSI-------LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+ + T + +S L R E+ + G + + +L A + +
Sbjct: 432 LVSETVVDDTNVKDFNLNSEQDLDR-------EVEYVGSGVSSFTYASLLSGAACIGTIG 484
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ DL V N+++ MYSKCG+ E A +VF++M + +V +W S+++ +
Sbjct: 485 KGEQIHAMVVKIGFRT-DLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGF 543
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PN 233
+G + +A+E+ +M G +P+ VT V+ A +GL+ EA K F ++D P
Sbjct: 544 AKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPR 603
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ + ++ +GR G+ L E +N DA L SCR
Sbjct: 604 MEHYACMV---DLLGRSGL-LSEAIEFINSMPFDADALVWRTFLGSCR 647
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 53/314 (16%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVL 108
DL SA +F ++ + NV +T ++ +++G + I+ + EM G PD + ++
Sbjct: 210 DLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLI 269
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
CA++ L DL V S++DMY+KCG V+ A +VFD MRE +V
Sbjct: 270 SVCAEIQ-FLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNV 328
Query: 169 FSWNSMMSCYV--CNGLSQRAVEVLESMRVD-GCEPDVVTRNTVMDA------------- 212
SW ++++ YV G + A+ + +M + G P+ T + V+ A
Sbjct: 329 MSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQV 388
Query: 213 ----------------------YCRMGLVSEASKVFEQIKDPNVISWT----TLISGYSS 246
Y + G + A K F+ + + N++S T T + ++
Sbjct: 389 HGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNL 448
Query: 247 VGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIF 305
+ + E V G+ F A LSG C+G + G++IH +KI G
Sbjct: 449 NSEQDLDREV--EYVGSGVSSFTYASLLSGA----ACIGTIGKGEQIHAMVVKI--GFRT 500
Query: 306 YRSAGAALLTLYAR 319
S AL+++Y++
Sbjct: 501 DLSVNNALISMYSK 514
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 38/298 (12%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L A H ++ G F T LI Y + AH LF ++ PNV +++ ++A
Sbjct: 39 LPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAG 98
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+ R G + + +M+ V P+ + F ++ AC+ LA L E
Sbjct: 99 YVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANL-ETGRRIHALVEVFGYRS 157
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES-- 193
DL VC+S++DMY KC V+ A +FD M R+V SW SM++ Y NG A+++
Sbjct: 158 DLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFN 217
Query: 194 -MRVD---------------------------------GCEPDVVTRNTVMDAYCRMGLV 219
+R++ G + V + ++D Y + G V
Sbjct: 218 HIRMNKPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCV 277
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+ + KVF +I +P+V+ +T++I G + G +SL +F+EMV D + P++ GVL
Sbjct: 278 TYSDKVFRRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMV-DRRIKPNSITFVGVL 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D N++++ Y K ++ A ++FDEM +V SW+ +M+ YV G A+ + M+
Sbjct: 57 DTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQMQ 116
Query: 196 -----------------------------------VDGCEPDVVTRNTVMDAYCRMGLVS 220
V G D+V ++++D Y + V
Sbjct: 117 GTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVD 176
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
EA +F+ + NV+SWT++I+ YS G+ ++L +FRE + M P+ L + +C
Sbjct: 177 EAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTAC 236
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
LG L SGK HG +++ G +AL+ +YA+
Sbjct: 237 ASLGRLGSGKITHGVVIRL--GHDASDVVASALVDMYAK 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 34/282 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++L+ ACS +L +++H + + G + LI +Y C+ + A +F +
Sbjct: 127 FSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFMW 186
Query: 63 QPNVFAFTSILAFHSRHG---LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
NV ++TS++ +S++G LA Q + +R P+ ++ + ACA L L
Sbjct: 187 VRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMN--KPNHFMLCSAVTACASLGRLGS 244
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V ++++DMY+KCG V + +VF + V + SM+
Sbjct: 245 GKITHGVVIRLGHDASDV-VASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTSMIVGAA 303
Query: 180 CNGLSQRAVEVLESMRVD------------------------GCEPDVVTRNTVMDAYCR 215
GL ++ + + M VD G PD ++D R
Sbjct: 304 KYGLGTLSLRLFQEM-VDRRIKPNSITFVGVLHLFNSMNEKYGVMPDARHYTCIVDMLGR 362
Query: 216 MGLVSEASKVFEQIK---DPNVISWTTLISGYSSVGRHGVSL 254
+G + EA ++ + ++ + + + W TL+S GR +++
Sbjct: 363 VGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLHGRVDIAI 404
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
G D T N ++++Y ++ + A K+F+++ PNV+SW+ L++GY G+ ++L +F
Sbjct: 53 GLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLF 112
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+M +V P+ S ++ +C L L +G+ IH
Sbjct: 113 HQM-QGTLVMPNEFTFSTLINACSILANLETGRRIHA 148
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S + AC++ L K H ++ G + L+ +YA C + + +FR++ P
Sbjct: 231 SAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNP 290
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +TS++ +++GL + + EM + + P+ F VL +
Sbjct: 291 SVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVLHLFNSM---------- 340
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR---ERDVFSWNSMMSCYVCN 181
D R ++DM + G ++ A ++ ++ E D W +++S +
Sbjct: 341 ---NEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLH 397
Query: 182 GLSQRAVE----VLES 193
G A+E V+ES
Sbjct: 398 GRVDIAIEASNRVIES 413
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 160/364 (43%), Gaps = 54/364 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ C + S + + +H +++ GSH PF ++ L+ +YA C + A +F + + N
Sbjct: 84 LLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRN 143
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
A+T+++ + ++ + + I + EM P Y L AC L + L+
Sbjct: 144 AVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHS-LKLGEQL 202
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKC-GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D + N++ +Y+KC G +E F ++E+DV SW + +S G
Sbjct: 203 HAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGE 262
Query: 184 SQRAVEVLESMRVD-------------------------------------GCEPDVVTR 206
+ + V V M +D G E ++ R
Sbjct: 263 AMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVR 322
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS----------SVGRHGV-SLG 255
N+++ Y + G + EA ++F+ + D N+++W +I+G++ S + G+ +L
Sbjct: 323 NSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALN 382
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLT 315
+F ++ GM PD S VL C + AL G++IH +K G + G++++
Sbjct: 383 LFSKLNRSGMK-PDPFTFSSVLSVCSKMMALEQGEQIHARTIK--TGFLSDVVVGSSMIN 439
Query: 316 LYAR 319
+Y +
Sbjct: 440 MYNK 443
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L C K L Q+H G L+ +Y C + A LF+ +
Sbjct: 287 LTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN 346
Query: 63 QPNVFAFTSILAFH------SRHGLAR-----QCIETYAEMRFKGVSPDGYVFPKVLKAC 111
N+ + +++A H S+ L+ + + ++++ G+ PD + F VL C
Sbjct: 347 DVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVC 406
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
+++ AL E D+ V +S+++MY+KCG +E A++VF EM R + W
Sbjct: 407 SKMMAL-EQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILW 465
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK- 230
+M++ + +G S++A+ + E M++ G P++VT V+ A G+V+EA FE ++
Sbjct: 466 TTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQK 525
Query: 231 ----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
P + + L+ +G+ + + ++M F S ++V C G L
Sbjct: 526 EYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEF----IWSNLIVGCLSQGNL 581
Query: 287 ASG 289
G
Sbjct: 582 ELG 584
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 49/357 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGS---HRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LL+ C + SL +A+QLH +L + + F +I +Y+ C L AH +F ++P
Sbjct: 14 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 73
Query: 63 QPNVFAFTSILAFHSRHGLARQCI---ETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
Q ++ ++LA +SR + C+ Y +M G+ P +L+A A L L
Sbjct: 74 QRTHVSYNALLAAYSRVS-EQHCVYAFNLYTQMENMGLRPSNMTITSLLQA-ASLHGDLL 131
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V S+L+MYS C D+ A VF +M ERD +WNS++ Y+
Sbjct: 132 IGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYL 191
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT---------------------------------- 205
N ++ V + M G P V T
Sbjct: 192 KNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLH 251
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+N ++D YC G A +F +++ +++SW ++ISGY ++ +F ++
Sbjct: 252 LQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALC 311
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS--AGAALLTLYAR 319
PD +G++ + + GK +HG +K F RS G+ L+++Y +
Sbjct: 312 FPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAG----FVRSVFVGSTLVSMYFK 364
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 149/355 (41%), Gaps = 40/355 (11%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M + SLLQA S L LH L G T L+ +Y+ C DL SA S+F
Sbjct: 115 MTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCD 174
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + + A+ S++ + ++ + + + EM + G +P Y F +L AC++L
Sbjct: 175 MNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFS- 233
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
DL + N+++DMY GD + A +F M + D+ SWNSM+S Y
Sbjct: 234 GRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFE 293
Query: 181 NGLSQRAVEVLESMR-----------------VDGCEP-------------------DVV 204
N ++A+ + ++ G P V
Sbjct: 294 NEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVF 353
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+T++ Y + A +VF I + I WT +I+GYS + ++ F EM ++
Sbjct: 354 VGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEV 413
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D LSGVL C L L G+ IH Y K+ G S +L+ +YA+
Sbjct: 414 HEIDDY-VLSGVLSVCAYLAILRQGEIIHCYAYKL--GYDVEMSVSGSLIDMYAK 465
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ A A + K LH ++ G R F + L+ +Y + +A +F +P +
Sbjct: 323 IISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKD 382
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+T ++ +S+ I ++EM + D YV VL CA LA +L
Sbjct: 383 AILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLA-ILRQGEIIH 441
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V S++DMY+K G++E A VF ++ D+ WNSM+ + +G+
Sbjct: 442 CYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVD 501
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
A+++ E + G PD VT +++ A LV + ++
Sbjct: 502 DALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLW 542
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 140/352 (39%), Gaps = 44/352 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS K + +H +++ L+ +Y + D ++A+ +F ++ + +
Sbjct: 221 ILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWD 280
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ S+++ + + + + + +++ PD Y + ++ A
Sbjct: 281 LVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCF-SYGKPL 339
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++++ MY K + E A RVF + +D W M++ Y
Sbjct: 340 HGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADG 399
Query: 185 QRAVEVLESM-----RVD------------------------------GCEPDVVTRNTV 209
A+ M +D G + ++ ++
Sbjct: 400 MGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSL 459
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G + A VF Q+ P++ W +++ G+S G +L +F E++ G+V PD
Sbjct: 460 IDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLV-PD 518
Query: 270 AGALSGVLVSCRCLGALASGKEIHGY--GLKIMPGEIFYRSAGAALLTLYAR 319
+L +C + GK + Y + ++PG Y + ++TL +R
Sbjct: 519 QVTFLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKHY----SCMVTLLSR 566
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 13/244 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L C+ L Q + +H Y G + + LI +YA +L +A+ +F Q+
Sbjct: 421 LSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVS 480
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P++ + S+L S HG+ ++ + E+ +G+ PD F +L AC+ + L+E
Sbjct: 481 HPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSH-SRLVEQGK 539
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE--MRERDVFSWNSMMS-CYV 179
+ + ++ + S+ +E A + ++ E +V W +++S C +
Sbjct: 540 LLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACVI 599
Query: 180 CNGLS---QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI---KDPN 233
L + A EVL DG P ++ + + A R V+E + + + K+P
Sbjct: 600 NKNLKVGVRAAEEVLRFNAEDG--PTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPG 657
Query: 234 VISW 237
+SW
Sbjct: 658 -LSW 660
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 6/259 (2%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I Y D+ SA +F ++P+ NV ++++++A +SR R+ ++ + EM+ +GV
Sbjct: 185 TAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVR 244
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ V VL ACA L AL + + + +++DMYSKCG VE A
Sbjct: 245 PNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALS 304
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VFD + ++DV +WN+M+S NG +++++E+ + M V G +P+ T V+ A +
Sbjct: 305 VFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARM 364
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
V E ++FE++ +P + ++ S G + E + G DA
Sbjct: 365 VREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMG-GFAAGDANVW 423
Query: 274 SGVLVSCRCLGALASGKEI 292
+L +CR + G +
Sbjct: 424 GAILNACRIYKNINVGNRV 442
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 124/307 (40%), Gaps = 53/307 (17%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD---LRSAHSLFR 59
L +L Q C+ SL Q KQLH ++L P+ ++ + A + A S+F
Sbjct: 7 LTTLAQNCN---SLTQLKQLHAHILRCHIQHSPYALAPILSVAATSNYTSFFLYARSIFH 63
Query: 60 QLPQPNVFAF---TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
L N F T I A+ H + Y M G++ + Y FP ++K+C L A
Sbjct: 64 NLTHRNRNTFIHNTMIRAYLQNHS-PTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIA 122
Query: 117 LLEXXXXXXXX-------XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
D V + ++ YS G++ A +FD+ +DV
Sbjct: 123 ASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVV 182
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
W +M +D Y ++G V A ++F+++
Sbjct: 183 LWTAM-----------------------------------IDGYGKIGDVESAREMFDEM 207
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+ NV+SW+ +++ YS V L +F EM ++G V P+ L VL +C LGAL G
Sbjct: 208 PERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEG-VRPNDSVLVTVLTACAHLGALTQG 266
Query: 290 KEIHGYG 296
+H Y
Sbjct: 267 MWVHSYA 273
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 46/360 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTK-LIQIYADCDDLRSAHSLFRQL 61
L ++L++CSA + N K LH Y++ G H T+K L+ +YA C L H LF Q
Sbjct: 46 LAAILKSCSALLASNLGKCLHSYVVKQG-HVSCHVTSKALLNMYAKCGMLDDCHKLFDQF 104
Query: 62 PQPNVFAFTSILAFHSRHGLAR-QCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLE 119
+ + + +L+ +SR G ++ + M G V P VL CA+ + L
Sbjct: 105 GRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCAR-SGNLN 163
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE-GAARVFDEMRERDVFSWNSMMSCY 178
D N+++ MY+KCG V A VFD + +DV SWN+M++
Sbjct: 164 GGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGL 223
Query: 179 VCNGLSQRAVEVLESMRVDGCEP------------------------------------- 201
NGL + A + M +P
Sbjct: 224 AENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPEL 283
Query: 202 --DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
DV N ++ Y ++G EA +F + +++SW T+I+GY+ G SL +F
Sbjct: 284 SADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGN 343
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+V+ M+ D+ + +L +C L L +GK++H Y L+ P SAG AL++ YA+
Sbjct: 344 LVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILR-HPFLFEDTSAGNALVSFYAK 402
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 82/363 (22%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFF------TTKLIQIYADCDDLRSAHSLF 58
S+L AC+ +L KQ+H Y+L R PF L+ YA C + A+ F
Sbjct: 359 SILPACAQLDNLQAGKQVHAYIL-----RHPFLFEDTSAGNALVSFYAKCGYIEEAYHTF 413
Query: 59 RQLPQPNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+ + ++ ++ SIL AF + +R + ++ + PD ++ CA L +
Sbjct: 414 SMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLD-IRPDSVTILTIIHFCASLLRV 472
Query: 118 --LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE------------- 162
++ V N++LD YSKCG++E A ++F
Sbjct: 473 KKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSL 532
Query: 163 -------------------MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
M E D+ +WN M+ Y N ++A+E+ ++ G +PDV
Sbjct: 533 ISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDV 592
Query: 204 VT----------------------------------RNTVMDAYCRMGLVSEASKVFEQI 229
VT + T++DAY + G++ A K+F+
Sbjct: 593 VTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQSS 652
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
D +++ +T +I GY+ G +L F M+N G + PD + +L +C G +A G
Sbjct: 653 VDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMG-IKPDHVIFTSILSACSHAGRIAEG 711
Query: 290 KEI 292
+I
Sbjct: 712 LKI 714
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 47/359 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR-SAHSLFRQLPQ 63
++L C+ S +LN K +H Y++ G F L+ +YA C + A+++F +
Sbjct: 151 TVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIH 210
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX-- 121
+V ++ +++A + +GL ++ ++ M V P+ +L CA +
Sbjct: 211 KDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCG 270
Query: 122 -XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ VCN++L Y K G + A +F M RD+ SWN++++ Y
Sbjct: 271 RQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYAL 330
Query: 181 NGLSQRAVEV------LESMRVDGCE-------------------------------PDV 203
NG +++ V LE + +D D
Sbjct: 331 NGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDT 390
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++ Y + G + EA F I ++ISW +++ + H L + M+
Sbjct: 391 SAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKL 450
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA---GAALLTLYAR 319
+ PD+ + ++ C L + KEIHGY ++ G + +A G A+L Y++
Sbjct: 451 D-IRPDSVTILTIIHFCASLLRVKKVKEIHGYSIR--SGSLLCATAPTVGNAILDAYSK 506
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLP 62
N++L A S ++ A + M + S ++ T LI Y A+ +F +
Sbjct: 498 NAILDAYSKCGNIEYANK----MFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMS 553
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ + ++ ++ + Q +E + +++ +G+ PD ++ C Q+A++
Sbjct: 554 ETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASV--HLL 611
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL + ++LD Y+KCG + A ++F ++D+ + +M+ Y +G
Sbjct: 612 RQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHG 671
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+S++A+E M G +PD V +++ A G ++E K+F+ I+
Sbjct: 672 MSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIE 719
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 41/350 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ C + L + ++H ++ +G F T ++ +YA C + A+ +F ++P+ +
Sbjct: 141 LLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERD 200
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + +++A ++++G AR+ ++ +M+ G D VL A A + L
Sbjct: 201 LVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKG-LRIGRSVH 259
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V ++LDMY KCG+VE VF M ++V SWN+++ NG S+
Sbjct: 260 GYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESE 319
Query: 186 RAVEVLESMRVDGCEP-----------------------------------DVVTRNTVM 210
A M + EP +V N+++
Sbjct: 320 EAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLI 379
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y + V A+ VF+ ++ ++W +I GY+ G +L +F M + G + PD+
Sbjct: 380 SMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQG-IKPDS 438
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
V+ + L K IHG ++ M +F AL+ +YA+
Sbjct: 439 FTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVF---VATALVDMYAK 485
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 45/338 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A + K L + +H Y + G +T L+ +Y C ++ + +F+++
Sbjct: 239 LVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMS 298
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++ +++ +++G + + T+ +M + V P L AC+ L LE
Sbjct: 299 SKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGD-LERGK 357
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V NS++ MYSKC V+ AA VFD + + +WN+M+ Y NG
Sbjct: 358 FVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNG 417
Query: 183 LSQRAVEVLESMRVDGCEPD--------------VVTR---------------------N 207
A+ + +M+ G +PD VTR
Sbjct: 418 CVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVAT 477
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + G + A ++F+ +++ +VI+W +I GY + G +L +F +M N+ +
Sbjct: 478 ALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLK 537
Query: 268 PDAGALSGVLVSCRCLGALASG-------KEIHGYGLK 298
P+ V+ +C G + G KE GYGL+
Sbjct: 538 PNDITFLSVISACSHSGFVEEGLYYFKIMKE--GYGLE 573
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 137/303 (45%), Gaps = 11/303 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L ACS L + K +H + LI +Y+ C + A S+F L
Sbjct: 344 LHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN 403
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ +++ ++++G + + + M+ +G+ PD + F V+ A A L+ +
Sbjct: 404 VTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLS-VTRQAKWIHG 462
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ V +++DMY+KCG +E A +FD M+ER V +WN+M+ Y +GL +
Sbjct: 463 LAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKA 522
Query: 187 AVEVLESMRVDGC-EPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+++ + M+ + +P+ +T +V+ A G V E F+ +K +P++ + +
Sbjct: 523 ALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAM 582
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ G+ + EM + P L +L +C+ + G++ ++
Sbjct: 583 VDLLGRAGKLDDAWKFIHEMP----IKPGITVLGAMLGACKIHKNIELGEKAADRLFELD 638
Query: 301 PGE 303
P E
Sbjct: 639 PDE 641
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
+ S+++ Q+ +++ +G + + F TKLI ++ + A +F + + ++
Sbjct: 47 TTSISELHQILPHIIKNGFYNQHLFQTKLISLFCKFGTINEALRVFDSVETKLDVLYHTL 106
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
L + ++ + + + M+ V P Y F +L+ C + L+
Sbjct: 107 LKGYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGE-NFDLKKGMEVHGMLIKNG 165
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
+L SV+++Y+KC ++ A ++F M ERD+ WN++++ Y NG +++A++++
Sbjct: 166 FESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVL 225
Query: 193 SMRVDGCEPDVVTRNTV-----------------------------------MDAYCRMG 217
M+ DG + D +T +V +D Y + G
Sbjct: 226 DMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCG 285
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
V VF+++ NV+SW T+I G + G + F +M + V P ++ G L
Sbjct: 286 EVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEK-VEPTNVSMMGAL 344
Query: 278 VSCRCLGALASGKEIH 293
+C LG L GK +H
Sbjct: 345 HACSNLGDLERGKFVH 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ A + QAK +H + F T L+ +YA C + +A LF + +
Sbjct: 443 SVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQER 502
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXX 123
+V + +++ + HGL + ++ + +M+ + + P+ F V+ AC+ + E
Sbjct: 503 HVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYY 562
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ +++D+ + G ++ A + EM
Sbjct: 563 FKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEM 602
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 146/358 (40%), Gaps = 73/358 (20%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L AC+ L+ Q+H + + + L+ +Y+ C + SA F +
Sbjct: 156 SALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR 215
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ ++ S++ + ++G A + +E + M G+ PD V ACA L+A+ E
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD----------------------- 161
DL + N+++DMY+KC V A VFD
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 162 --------EMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP------------ 201
M ER+V SWN++++ Y NG ++ AV + ++ + P
Sbjct: 336 KAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNAC 395
Query: 202 -----------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDP 232
D+ N+++D Y + GLV + VFE++ +
Sbjct: 396 ANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLER 455
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ +SW +I GY+ G +L IFREM+ G PD + GVL +C G + G+
Sbjct: 456 DNVSWNAMIVGYAQNGYGTEALEIFREMLVSGER-PDHVTMIGVLSACSHAGLVEEGR 512
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 18/308 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ + + +N+A+ + M L R T ++ YA +++A +F + +
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPL----RDVVSETSMVSGYAKASSVKAARLMFSNMME 347
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-----L 118
NV ++ +++A ++++G + + + ++ + + P Y F +L ACA LA L
Sbjct: 348 RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V NS++DMY KCG VE VF+ M ERD SWN+M+ Y
Sbjct: 408 HTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGY 467
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PN 233
NG A+E+ M V G PD VT V+ A GLV E F+ + P
Sbjct: 468 AQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPV 527
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+T ++ +GR G L ++ + PDA +L +C+ G + GK +
Sbjct: 528 KDHYTCMV---DLLGRAGC-LDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVA 583
Query: 294 GYGLKIMP 301
L+I P
Sbjct: 584 ERLLEIDP 591
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 160/416 (38%), Gaps = 104/416 (25%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL C SKS+ +A+ +H ++ + F +L+ +Y C L A +F + Q N
Sbjct: 25 LLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRN 84
Query: 66 VFAFTSILAFHSRHGLARQCIETY-------------------------------AEMRF 94
F++ ++L ++ G + + + +M
Sbjct: 85 TFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHS 144
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+ + Y F L ACA L L D+ + ++++DMYSKC V
Sbjct: 145 EDFVLNEYSFGSALSACAGLMDL-SIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVA 203
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR-------- 206
A R FD+M R++ SWNS+++CY NG + +A+EV M G EPD +T
Sbjct: 204 SAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACA 263
Query: 207 ----------------------------NTVMDAYCRMGLVSEASKVFEQIK-------- 230
N ++D Y + V+EA VF+++
Sbjct: 264 SLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSET 323
Query: 231 -----------------------DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+ NV+SW LI+GY+ G + ++ +F + + ++
Sbjct: 324 SMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES-IW 382
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK----IMPGEIFYRSAGAALLTLYAR 319
P +L +C L L G++ H + LK GE G +L+ +Y +
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMK 438
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 46/243 (18%)
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
++HGL R+ + ++ F SP F K+L C + ++ E +
Sbjct: 2 AKHGLVRKVV---GDLSFLDSSP----FAKLLDTCVKSKSVFEARLVHARIIKTQFSS-E 53
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
+ + N ++D+Y KCG +E A +VFD M++R+ FSWN+
Sbjct: 54 IFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNA----------------------- 90
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
V+ A + G + EA +F+ + + + SW ++SG++ R +L
Sbjct: 91 ------------VLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRF 138
Query: 257 FREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTL 316
+M ++ V + + L +C L L+ G +IHG K Y G+AL+ +
Sbjct: 139 VVDMHSEDFVLNEY-SFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVY--MGSALVDM 195
Query: 317 YAR 319
Y++
Sbjct: 196 YSK 198
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 44/318 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+N+LL S + S N A +L M R F L+ YA ++ +A LF +P
Sbjct: 48 MNNLLNFYSKTASFNDAHRLFSEM----PQRTTFSWNTLLSSYAKGGNIETARRLFDDIP 103
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+ ++T+++ +++ G I T+ +M G+ P + F VL +C +L +
Sbjct: 104 EPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSL-DIGK 162
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS+L+MY K GD VFD MR RD +WN M+S ++ +G
Sbjct: 163 KVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSG 222
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
A+ + + M + D+++ N+++ YC G S+A
Sbjct: 223 RFDVALALFDQM----TDRDIISWNSIIAGYCHQGYDSKA-------------------- 258
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
L F +M + PD L VL +C L +L GK+IH Y I+
Sbjct: 259 -----------LETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAY---IVRA 304
Query: 303 EIFYRSA-GAALLTLYAR 319
+I A G AL+++YA+
Sbjct: 305 DIDISGAVGNALISMYAK 322
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 44/318 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYML--------------------------------LHG 30
L S+L AC+ +SL KQ+H Y++ L G
Sbjct: 278 LGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRG 337
Query: 31 SHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETY 89
+ T L+ Y D+ A +F L +V A+T+++ ++++ L + +E +
Sbjct: 338 TSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELF 397
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
M +G P+ Y VL + LA+L + + V N+++ MYSK
Sbjct: 398 RLMISEGPRPNSYTLAAVLSVFSSLASL-DHGKQLHAIAIRLKEVSSVSVGNALITMYSK 456
Query: 150 CGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
G ++ A +VF+++ ERD +W SM+ +GL A+E+ E M +PD +T
Sbjct: 457 SGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVG 516
Query: 209 VMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
V+ A +GLV + + F +K +P + +I + G + + M
Sbjct: 517 VLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMP-- 574
Query: 264 GMVFPDAGALSGVLVSCR 281
+ PD A +L +CR
Sbjct: 575 --IEPDGIAWGSLLSACR 590
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 38/267 (14%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACA 112
A +LF Q+ ++ ++ SI+A + G + +ET+++M R + PD + VL ACA
Sbjct: 227 ALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACA 286
Query: 113 QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWN 172
L +L + V N+++ MY+K G VE AR E+R
Sbjct: 287 NLESL-KLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVE-VARTIVELR-------- 336
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP 232
G S +V+ ++++ Y ++G V+ A ++F+ +K
Sbjct: 337 ---------GTSN---------------INVIAFTSLLNGYVKIGDVNPAREIFDSLKCR 372
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+V++WT +I GY+ +L +FR M+++G P++ L+ VL L +L GK++
Sbjct: 373 DVVAWTAMIVGYAQNSLLKDALELFRLMISEG-PRPNSYTLAAVLSVFSSLASLDHGKQL 431
Query: 293 HGYGLKIMPGEIFYRSAGAALLTLYAR 319
H +++ E+ S G AL+T+Y++
Sbjct: 432 HAIAIRL--KEVSSVSVGNALITMYSK 456
>Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36649387-36650467 | 20130731
Length = 316
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL C +SK++N K +H + G F TKL+ YA C L A+ LF +
Sbjct: 13 TLLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRK 72
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
F + S++ + L ++ + + EMR D + P VLK+CA L+A L
Sbjct: 73 PTFLYNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSA-LRLGKQV 131
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL+ N++++MY+KCG++E A +VFD M ER+ +W++MM+ + +G
Sbjct: 132 HGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMADFGMHGRF 191
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ E+ M G D V+ V+ A G V + ++FE +K P+V +T
Sbjct: 192 EEVFEMFNRMVEVGERMDSVSFTVVLTACSHGGFVEKGREIFEIMKVRFGVKPDVRHYTC 251
Query: 240 LISGYSSVG 248
++ VG
Sbjct: 252 MVDMLGRVG 260
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 39/337 (11%)
Query: 18 QAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFH 76
K LH H + H FF LI +Y D+ AH LF + QP++ ++ +++ +
Sbjct: 52 NTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGY 111
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
R+ + + +E + M G PD + + VL AC L A +
Sbjct: 112 VRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSG 171
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
V ++DM+ K + A R F++ +V SWN+++S V NG +Q A+ + M
Sbjct: 172 -YVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCR 230
Query: 197 DGCEP----------------------------------DVVTRNTVMDAYCRMGLVSEA 222
P DV ++D Y + G +SEA
Sbjct: 231 ASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEA 290
Query: 223 SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
+ F Q++ NV+SWT +ISG+ +L +F++M G +A ++ VL +C
Sbjct: 291 YRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEI-NAYTVTSVLSACAK 349
Query: 283 LGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ K+IH LK+ G I GAAL+ +YA+
Sbjct: 350 PELIEEAKQIHSLVLKL--GLILNVKVGAALVNMYAK 384
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 159/348 (45%), Gaps = 38/348 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC A K + K +H + G+ F T ++ +YA + A+ F Q+
Sbjct: 242 SILTACCALKEMQIGKGVHGLAIKCGA-TDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQ 300
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T+I++ + ++ + +MR G + Y VL ACA+ L+E
Sbjct: 301 NVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAK-PELIEEAKQI 359
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCNGL 183
+++V ++++MY+K G V + F EM+ +D W SM+S + N
Sbjct: 360 HSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRN 419
Query: 184 SQRAVEVLESMRVDGCEPD----------------------------VVTRNTV----MD 211
S RA+E+ M +G +PD +VT TV
Sbjct: 420 SGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQVHSYILKAGLVTNATVGCSLFT 479
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + E+ +VF+Q + +SW ++ISG+ G +L +F+EM+ +V PD
Sbjct: 480 MYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVV-PDHI 538
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L +L +C L L +G+EIHG ++ G G AL+ +Y++
Sbjct: 539 TLISILTACADLRLLRTGREIHGSTFRLGLGT--NTVVGGALVNMYSK 584
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
Q+H Y+L G L +Y+ C L ++ +F+Q + ++ S+++ HG
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHG 516
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
Q + + EM ++ V PD +L ACA L LL + V
Sbjct: 517 YPDQALRLFKEMLYQEVVPDHITLISILTACADL-RLLRTGREIHGSTFRLGLGTNTVVG 575
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-----R 195
++++MYSKCG + A +VFD + +D F+ +S++S Y NGL + + + M
Sbjct: 576 GALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDET 635
Query: 196 VD------------------------------GCEPDVVTRNTVMDAYCRMGLVSEASKV 225
VD G + DV ++++ Y + G + + K
Sbjct: 636 VDAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKA 695
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
F+ ++ P++I WT+LI Y+ G+ +L + M ++G V PDA G+L +C
Sbjct: 696 FDDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEG-VEPDAVTFVGILSAC 749
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ + L +++H G L+ +Y+ C L A +F LP
Sbjct: 540 LISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILP 599
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ FA +S+++ ++++GL + + +M + D + +L A A L +
Sbjct: 600 HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGA-ASLLCQSDIGT 658
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V +S+L MYSKCG +E + FD++ + D+ W S++ Y +G
Sbjct: 659 QLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHG 718
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA----SKVFEQIK-DPNVISW 237
A+ E M+ +G EPD VT ++ A GLV EA + + E K P+ +
Sbjct: 719 KGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSHRHY 778
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
++ GR L +N+ V P+A +L +C+ G GK
Sbjct: 779 ACIVDILGRSGR----LREAESFINNMPVEPNALIWGTLLAACKVHGDFELGK 827
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC A ++ Q+ ++ +G + T+++ ++ + A F
Sbjct: 141 SVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCD 200
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++ +I++ ++G + + ++EM + P+ Y FP +L AC L +
Sbjct: 201 NVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEM--QIGKG 258
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V +++D+Y+K G + A R F +M+ ++V SW +++S +V +
Sbjct: 259 VHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDT 318
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTL 240
A+++ + MR G E + T +V+ A + L+ EA ++ + NV L
Sbjct: 319 TFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAAL 378
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
++ Y+ +G G+S F EM N D G + +L S
Sbjct: 379 VNMYAKIGGVGLSELAFSEMKN----MKDPGIWASMLSS 413
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 51/357 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDL---RSAHSLFR 59
+ S+L AC+ + + +AKQ+H +L G L+ +YA + A S +
Sbjct: 340 VTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMK 399
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ P ++A S+L+ +++ + + +E + M +GV PD Y +L + L+ +
Sbjct: 400 NMKDPGIWA--SMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQ 457
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V S+ MYSKCG +E + VF + +D SW SM+S +V
Sbjct: 458 ----VHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFV 513
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT------------------------------RNTV 209
+G +A+ + + M PD +T NTV
Sbjct: 514 EHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTV 573
Query: 210 -----MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV-ND 263
++ Y + G +S A KVF+ + + + ++L+SGY+ G S +F +M+ ND
Sbjct: 574 VGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRND 633
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
V DA ++ +L + L G ++H Y K+ + ++ S G++LLT+Y++
Sbjct: 634 ETV--DAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADV---SVGSSLLTMYSK 685
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 147/294 (50%), Gaps = 23/294 (7%)
Query: 35 PFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
P +TT L+ YA C D+ SA +F Q+P+ N +++T+++ ++R+G+A + + + +M
Sbjct: 245 PAWTT-LVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIM 303
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V PD + F L ACA +A+L + V ++V+DMY+KCG +E
Sbjct: 304 HRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPV-VVSAVVDMYAKCGSME 362
Query: 155 GAARVFDEMRE-RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
A R+F+ +DV WN+M+S G + AV +L M G +P+ T +++A
Sbjct: 363 TARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNAC 422
Query: 214 CRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF- 267
GLV + + F+ + + P++ + LI +GR G F E + D +
Sbjct: 423 SHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLI---DLLGR----AGCFVESMKDLFMID 475
Query: 268 --PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL-TLYA 318
P L +L CR G++ G+E+ + +K P + SA LL ++YA
Sbjct: 476 CKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQP----HSSAAYGLLSSIYA 525
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 75/351 (21%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHR-KPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L +LL+ CS +KS + K +H ++ L G R LI +Y C D A +F ++
Sbjct: 48 LATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARKVFDKM 107
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEM-------------------------RFKG 96
N++++ ++++ + + G+ +Q + +M RF G
Sbjct: 108 DVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYG 167
Query: 97 ------VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
V + + F VL C +L E ++ V +S++D Y+KC
Sbjct: 168 WMRRVCVGYNEFTFASVLIVCVKLKEF-ELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKC 226
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G +E A R+FD+M RD+ +W +++S Y
Sbjct: 227 GKMEDAMRLFDDMTVRDIPAWTTLVSGY-------------------------------- 254
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
A C G + A+++F Q+ N SWT LI GY+ G +LG+FR+M+ V PD
Sbjct: 255 -ALC--GDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMH-RVRPDE 310
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
S L +C + +L GK+IH + L+ I P + +A++ +YA+
Sbjct: 311 FTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVV----SAVVDMYAK 357
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 36/200 (18%)
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+G+ ++ +L+ C+ + E + N ++ MY CGD
Sbjct: 39 RGIRLSSHILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYV 98
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A +VFD+M R+++SWN+M+S YV
Sbjct: 99 RARKVFDKMDVRNLYSWNNMISGYV----------------------------------- 123
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
++G++ +A VF ++ + + +SW ++ GY+ GR +L + M + + + +
Sbjct: 124 KLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGY-NEFTFA 182
Query: 275 GVLVSCRCLGALASGKEIHG 294
VL+ C L ++IHG
Sbjct: 183 SVLIVCVKLKEFELCRQIHG 202
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S L AC+ SL KQ+H ++L + P + ++ +YA C + +A +F
Sbjct: 313 FSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTE 372
Query: 63 Q-PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+V + ++++ + +G ++ + +M GV P+ +L AC+
Sbjct: 373 HMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSH 424
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 36/323 (11%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M S L+ +++ +Q+H L++G+ KL+ Y + A+ LF +
Sbjct: 1 MATESCLRLLYTCRNIFHIRQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDE 60
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P + ++ ++ S+ G C T+ E+ ++PD Y P V++AC ++
Sbjct: 61 MPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKD-IQM 119
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY-- 178
D VC +++DMY+KC +E A ++FD M +D+ +W M+ CY
Sbjct: 120 GRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYAD 179
Query: 179 ---------------------------VCN-----GLSQRAVEVLESMRVDGCEPDVVTR 206
V N G RA V E + +G DV+
Sbjct: 180 YDAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILG 239
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++D Y + G V A +VF+++K+ NVISW+ +I+ Y G+ +L +F M++ G +
Sbjct: 240 TAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCG-I 298
Query: 267 FPDAGALSGVLVSCRCLGALASG 289
P+ +L +C G G
Sbjct: 299 SPNRITFVSLLYACSHSGLTDEG 321
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 11/301 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++AC K + + +H +L +G F L+ +YA C + A LF + +
Sbjct: 107 VIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKD 166
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +T ++ ++ + A + + + +R +G D V+ ACA+L A+
Sbjct: 167 LVTWTVMIGCYADYD-AYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAM-HRARFVN 224
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ + +++DMY+KCG V+ A VFD M+E++V SW++M++ Y +G +
Sbjct: 225 EYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGK 284
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KD----PNVISWTTL 240
A+++ M G P+ +T +++ A GL E F+ + +D P+V +T +
Sbjct: 285 EALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCV 344
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ GR +L + M V D S +L +CR G + ++ L++
Sbjct: 345 VDLLGRAGRLDEALKLIETM----NVEKDERLWSALLGACRVHGNMELAGKVAESLLELQ 400
Query: 301 P 301
P
Sbjct: 401 P 401
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+++ AC+ ++++A+ ++ Y+ +G T +I +YA C + SA +F ++ +
Sbjct: 206 TVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEK 265
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++++++A + HG ++ ++ + M G+SP+ F +L AC+ E
Sbjct: 266 NVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFF 325
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGL 183
D++ V+D+ + G ++ A ++ + M E+D W++++ +G
Sbjct: 326 DSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACRVHGN 385
Query: 184 SQRAVEVLESM 194
+ A +V ES+
Sbjct: 386 MELAGKVAESL 396
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 149/327 (45%), Gaps = 47/327 (14%)
Query: 29 HGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIET 88
H HR+ ++I+++ + L+ A ++PQP+ +++++A RH
Sbjct: 29 HSEHRR---FEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85
Query: 89 YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+A + P + +++ A+ +L++ DL N+++ Y+
Sbjct: 86 HAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQK-----DLCSWNTMISGYA 140
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD----------- 197
G +E A ++FDEM RD FSWN+++S YV G A+++ M+ +
Sbjct: 141 NVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLS 200
Query: 198 -------------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP 232
G E D V ++D Y + G ++EA +F+Q+ D
Sbjct: 201 SALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK 260
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+++SWTT+I GR +FR+++ G V P+ +GVL +C L A GKE+
Sbjct: 261 DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSG-VRPNEYTFAGVLNACADLAAEQMGKEV 319
Query: 293 HGYGLKIMPGEIFYRSAGAALLTLYAR 319
HGY ++ G + A +AL+ +Y++
Sbjct: 320 HGYMTRV--GYDPFSFAASALVHVYSK 344
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 8/273 (2%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+ K++H Y++ G T L+ +Y C L A +F Q+ ++ ++T+++
Sbjct: 214 RGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCF 273
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
G ++ + ++ GV P+ Y F VL ACA LAA E
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAA--EQMGKEVHGYMTRVGYDPF 331
Query: 138 RVCNSVL-DMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
S L +YSKCG+ E A RVF++M D+ SW S++ Y NG A++ ES+
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
G +PD +T V+ A GLV + F +K+ + + T Y+ V G
Sbjct: 392 SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTA--DHYACVIDLLARSGR 449
Query: 257 FREMVN--DGMVF-PDAGALSGVLVSCRCLGAL 286
F+E N D M PD + +L CR G +
Sbjct: 450 FKEAENIIDNMPMKPDKFLWASLLGGCRIHGNI 482
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 70/347 (20%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD-CDDLRSAHSLFRQLPQPNVFAFTSIL 73
++N Q++ +++ G P +T+ + A ++ A+ LF ++P PN++++ +I+
Sbjct: 40 TINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTII 99
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA------------------ 115
SR + I + +M + + P +P V KA AQL
Sbjct: 100 RAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQ 159
Query: 116 ----------------ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
L+ D+ NS++ Y+KCG+++ + +
Sbjct: 160 NDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNL 219
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE------------------- 200
FD+M R SWNSM+S YV NG A+E+ M+V+G E
Sbjct: 220 FDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGAL 279
Query: 201 ------PDVVTRN----------TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
D + RN ++D YC+ G V A +VFE + W ++I G
Sbjct: 280 QHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGL 339
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+ G + F ++ + ++ PD+ + GVL +C+ LGA+ ++
Sbjct: 340 AMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARD 386
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 15/249 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I YA C ++ + +LF + ++ S+++ + R+G + +E + +M+ +G
Sbjct: 203 MIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVS 262
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L ACA L A L+ ++ V +++DMY KCG VE A VF
Sbjct: 263 EFTMVSLLNACAHLGA-LQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVF 321
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEV---LESMRVDGCEPDVVTRNTVMDAYCRMG 217
+ R + WNS++ NG + A E LES ++ +PD V+ V+ A +G
Sbjct: 322 ETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKL--LKPDSVSFIGVLTACKHLG 379
Query: 218 LVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
+++A FE + +P++ +T ++ +G+ G+ L E++ + PDA
Sbjct: 380 AINKARDYFELMMNKYEIEPSIKHYTCIV---DVLGQAGL-LEEAEELIKGMPLKPDAII 435
Query: 273 LSGVLVSCR 281
+L SCR
Sbjct: 436 WGSLLSSCR 444
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 10/226 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC+ +L K +H Y+ + T +I +Y C + +A +F P+
Sbjct: 268 SLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRR 327
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ + SI+ + +G R+ E ++++ K + PD F VL AC L A+ +
Sbjct: 328 GLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDY 387
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNG 182
++ ++D+ + G +E A + M + D W S++S C
Sbjct: 388 FELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSS--CRK 445
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
+ + RV P + Y M V AS FE+
Sbjct: 446 HRNVQIARRAAQRVYELNPSDAS------GYVLMSNVHAASNKFEE 485
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 41/320 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC + + + ++H ++ G F L+ Y +D+ SA +F+ +P P+V
Sbjct: 65 LKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDV 124
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++TS+++ S+ G + IE ++ + K P+ + AC+ + A+
Sbjct: 125 VSWTSLISGLSKCGFETEAIEAFSSINVK---PNALTLVSAISACSSIGAIKFGKAIHAY 181
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ N+ LD+Y+KCG A VF +M +RDV SW +++ Y G
Sbjct: 182 GLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGE 241
Query: 187 AVEVLESMRVDG-CEPDVVTRNTVMDA--------------------------------- 212
AVEV + M V G EP+ T TV+ A
Sbjct: 242 AVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNAL 301
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y + G + KVF + +VISW T+I G + G + +F M+ G V PD
Sbjct: 302 VNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHG-VLPD 360
Query: 270 AGALSGVLVSCRCLGALASG 289
G+L +C +G ++ G
Sbjct: 361 DVTFIGLLSACSHVGLVSEG 380
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHY----MLLHGSHRKPFFTTKLIQIYADCDDLRSAHS 56
+ L S + ACS+ ++ K +H Y +++ G+ F + +YA C +A +
Sbjct: 157 LTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGN---IVFYNAALDLYAKCGFFSNARN 213
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLA 115
+F ++ + +V ++T++L ++R G + +E + +M G P+ VL ACA +
Sbjct: 214 VFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIG 273
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+L D + N++++MY KCGD++ +VF+ + +DV SW +++
Sbjct: 274 SLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVI 333
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
NG ++ V++ M V G PD VT ++ A +GLVSE F+ ++D
Sbjct: 334 CGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRD 389
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 41/258 (15%)
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
S + Y F LKAC A + D + N++L Y DV A
Sbjct: 55 SHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIF-DGFIKNTLLYFYLSSNDVVSAT 113
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV--------------------------- 190
RVF + DV SW S++S G A+E
Sbjct: 114 RVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINVKPNALTLVSAISACSSIGAIK 173
Query: 191 ---------LESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
L+S+ +DG ++V N +D Y + G S A VF ++ +VISWTTL+
Sbjct: 174 FGKAIHAYGLKSLMIDG---NIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLL 230
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
Y+ G+ G ++ +F++M+ G P+ + VL +C +G+L+ G +H Y K +
Sbjct: 231 MAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRID 290
Query: 302 GEIFYRSAGAALLTLYAR 319
++ + G AL+ +Y +
Sbjct: 291 LDV-DGNIGNALVNMYVK 307
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
R F + ++ Y D+ A ++FR++P N+ + S++A + ++G + +E + E
Sbjct: 209 ERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGE 268
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M G PD + VL ACAQL L + + V + ++DMY+KCG
Sbjct: 269 MGVDGFEPDEFTVVSVLSACAQLGDL-DAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCG 327
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
D+ A VF+ ER+VF WN+M++ + NG +E L+ M PD VT TV+
Sbjct: 328 DLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLS 387
Query: 212 AYCRMGLVSEASKVFEQIKD 231
A GLVSEA +V ++++
Sbjct: 388 ACAHGGLVSEALEVISKMEE 407
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 43/288 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+AC + L K LH + GS F T ++ YA C + A +F + + N
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERN 116
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +++ + R+G A+ + + EM K + +++ A+ L
Sbjct: 117 DVTWNAMIGGYLRNGDAKSALLAFEEMPGK----TRVSWSQMIGGFARNGDTL---TARK 169
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ + ++D Y+K G++E A VF+ M ER+ F W+SM VC
Sbjct: 170 FFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSM----VC----- 220
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
YC+ G V EA +F +I N+ W ++I+GY
Sbjct: 221 --------------------------GYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYV 254
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
G +L F EM DG PD + VL +C LG L +GK++H
Sbjct: 255 QNGCGEKALEAFGEMGVDGFE-PDEFTVVSVLSACAQLGDLDAGKQMH 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC+ L+ KQ+HH + G F + LI +YA C DL +A +F +
Sbjct: 283 SVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNER 342
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
NVF + +++A + +G + +E M + PD F VL ACA
Sbjct: 343 NVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSACAH 391
>Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:2188077-2185482 | 20130731
Length = 316
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL C +SK++N K +H + G F TKL+ YA C L A+ LF +
Sbjct: 13 TLLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANILFSFTNRK 72
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
F S++ + L ++ + + EMR D + P VLK+CA L+AL
Sbjct: 73 PTFLNNSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSAL-RLGKQV 131
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL+ N++++MY+KCG++E A +VFD M ER+ +W++M++ Y +G
Sbjct: 132 HGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMIAGYGMHGRF 191
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ E+ M G D V+ V+ A G V + ++FE +K P+V +T
Sbjct: 192 EEVFEMFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTC 251
Query: 240 LISGYSSVG 248
++ VG
Sbjct: 252 MVDMLGRVG 260
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSM-MSCYVCNGLS--QRAVEVLESMRV 196
NS++ Y + +F EMR F +++ + C GLS + +V ++ V
Sbjct: 78 NSLIRAYLSLNLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHGAVLV 137
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
+G D+ N +++ Y + G + A KVF+ + + N ++W+T+I+GY GR +
Sbjct: 138 NGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMIAGYGMHGRFEEVFEM 197
Query: 257 FREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
F MV G D + + VL +C G + G+EI
Sbjct: 198 FNRMVEVGERM-DNVSFTVVLTACSHGGFVEKGREI 232
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++L++ ++ + + KQ+H + G + + L+ Y C + A +F +
Sbjct: 390 LSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERT 449
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ A+TS++ +S+HG A + ++ Y +M+ + PD +V +L ACA L+A E
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSA-YEQGK 508
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ NS+++MY+KCG +E A R F E+ +R + SW++M+ +G
Sbjct: 509 QLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHG 568
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ A+ + M D P+ +T +V+ A GLV+E + FE +++
Sbjct: 569 HGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 38/330 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L+ACS K LN K++H ++ G F + L+ +YA C + LF + +P
Sbjct: 88 TVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEP 147
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V ++ ++ + H + + ++ + M V P+ Y +L ACA L
Sbjct: 148 GVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRD-GGIGRTV 206
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D N+++DMY+K G +E A VF EM D SWN++++ V + +
Sbjct: 207 HGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYN 266
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL-------------VSEASKVF----- 226
A+ +L M+ G P+V T ++ + A MGL + S +F
Sbjct: 267 DLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGL 326
Query: 227 -------EQIKDP-----------NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
E + D ++I+ LISGYS G ++ +F E+ ++ + F
Sbjct: 327 IDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDF- 385
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ LS VL S L + K+IH +K
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIK 415
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 40/335 (11%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP-NVFAFTSILAFHSRH 79
+LH +++ G R L+ Y++ A +L Q +P V +++++++ + ++
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G ++ + + EM GV + + FP VLKAC+ + L D V
Sbjct: 62 GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACS-IKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N+++ MY+KCG + ++F + E V SWN++ SC+V + V++ + M
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKV 180
Query: 200 EP-----------------------------------DVVTRNTVMDAYCRMGLVSEASK 224
P D + N ++D Y + G + +A
Sbjct: 181 RPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVD 240
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
VF ++ P+ +SW +I+G + ++L + EM G P+ LS L +C +G
Sbjct: 241 VFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSC-PNVFTLSSALKACAAMG 299
Query: 285 ALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G++IH +KI + + G L+ LY++
Sbjct: 300 LKDLGRQIHSCSVKIDSDSDLFVAVG--LIDLYSK 332
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 44/355 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L AC+ + + +H ++ G F L+ +YA + A +FR++
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMI 246
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P+ ++ +I+A H + EM+ G P+ + LKACA + L +
Sbjct: 247 HPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMG-LKDLGR 305
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD-VFSWNSMMSCYVCN 181
DL V ++D+YSKC ++ A R +D M +D + + N+++S Y
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQC 365
Query: 182 GLSQRAVEV---LESMRVD--------------------------------GCEPDVVTR 206
G ++A+ + L +D G D
Sbjct: 366 GDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVI 425
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGM 265
N+++D Y + + EASK+FE+ +++++T++I+ YS G +L ++ +M V D
Sbjct: 426 NSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVAD-- 483
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ PD S +L +C L A GK++H + +K +IF A +L+ +YA+
Sbjct: 484 IKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIF---ASNSLVNMYAK 535
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 10/302 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC+ KSL+ K++H ML +G F L+ +Y C + A F + +
Sbjct: 507 SLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEK 566
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ + +++ S++ ++ + +M + PD L AC+Q++AL
Sbjct: 567 NLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELH 626
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
C S++DMY+KCG +E + +FD + + +WN +++ Y +G
Sbjct: 627 CFAVKSHLTEHSFVTC-SLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHG 685
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
++A+E+ +SM+ G PD VT ++ A GLV+E + Q++ P + +
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYAC 745
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ GR +L E+VN+ PD+ S +L SCR L G+++ L++
Sbjct: 746 VVDMLGRAGRLNEAL----ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLEL 801
Query: 300 MP 301
P
Sbjct: 802 GP 803
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 41/332 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPF-FTTKLIQIYADCDDLRSAHSLFRQLPQP 64
LLQ C K++ +++H+++ + T+L+ +Y+ CD + +F +
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+F + ++L+ + R+ L R + + EM PD + P V+KAC + +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDV-RLGEA 217
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V N+++ MY K G VE A +VFD+M +R++ SWNS+M + NG+
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 184 SQRAVEVLESMRV--DGCEPDVVTRNTV-------------------------------- 209
+ + + + + +G PDV T TV
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 210 ---MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+D Y + G + EA +F+ + NVISW ++I GYS + + R+M + V
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ L VL C KEIHGY L+
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALR 428
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 136/328 (41%), Gaps = 38/328 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L ++L C + K++H Y L HG + YA C L A +F +
Sbjct: 403 LLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGM 462
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
V ++ +++ H ++G R+ ++ Y MR G+ PD + +L ACA+L + L
Sbjct: 463 ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKS-LSCG 521
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D +C S++ +Y +CG + A FD M E+++ WN+M++ + N
Sbjct: 522 KEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
A+++ M PD ++
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT 641
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+++D Y + G + ++ +F+++ ++W LI+GY G ++ +F+ M N G
Sbjct: 642 CSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFR 701
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHG 294
PD+ +L +C G +A G E G
Sbjct: 702 -PDSVTFIALLTACNHAGLVAEGLEYLG 728
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 40/318 (12%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG- 96
+ L+ +Y+ C L A LF + NV ++ S++ +S+ R E +M+ +
Sbjct: 337 NSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK 395
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
V + VL C + L+ D V N+ + Y+KCG + A
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---- 212
VF M + V SWN+++ +V NG ++A+++ MR G EPD+ T +++ A
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515
Query: 213 -------------------------------YCRMGLVSEASKVFEQIKDPNVISWTTLI 241
Y + G + A F+ +++ N++ W T+I
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
+G+S +L +F +M++ ++PD ++ G L +C + AL GKE+H + +K
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSSK-IWPDEISIIGALGACSQVSALRLGKELHCFAVKSHL 634
Query: 302 GEIFYRSAGAALLTLYAR 319
E + +L+ +YA+
Sbjct: 635 TE--HSFVTCSLIDMYAK 650
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM- 194
D+ + ++ MYS C + VF+ R +++F WN+++S Y+ N L + AV V M
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 195 --------------RVDGCE---------------------PDVVTRNTVMDAYCRMGLV 219
+ C DV N ++ Y + G V
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN-DGMVFPDAGALSGVLV 278
A KVF+++ N++SW +++ G S G+F+ ++N D + PD + V+
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 279 SCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
C G + G HG LK+ + GE+ ++LL +Y++
Sbjct: 308 LCARQGEVRLGMVFHGLALKLGLCGEL---KVNSSLLDMYSK 346
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++L++ ++ + + KQ+H + G + + L+ Y C + A +F +
Sbjct: 390 LSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERT 449
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ A+TS++ +S+HG A + ++ Y +M+ + PD +V +L ACA L+A E
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSA-YEQGK 508
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ NS+++MY+KCG +E A R F E+ +R + SW++M+ +G
Sbjct: 509 QLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHG 568
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ A+ + M D P+ +T +V+ A GLV+E + FE +++
Sbjct: 569 HGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 38/330 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L+ACS K LN K++H ++ G F + L+ +YA C + LF + +P
Sbjct: 88 TVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEP 147
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V ++ ++ + H + + ++ + M V P+ Y +L ACA L
Sbjct: 148 GVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRD-GGIGRTV 206
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D N+++DMY+K G +E A VF EM D SWN++++ V + +
Sbjct: 207 HGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYN 266
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL-------------VSEASKVF----- 226
A+ +L M+ G P+V T ++ + A MGL + S +F
Sbjct: 267 DLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGL 326
Query: 227 -------EQIKDP-----------NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
E + D ++I+ LISGYS G ++ +F E+ ++ + F
Sbjct: 327 IDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDF- 385
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ LS VL S L + K+IH +K
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIK 415
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 40/335 (11%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP-NVFAFTSILAFHSRH 79
+LH +++ G R L+ Y++ A +L Q +P V +++++++ + ++
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G ++ + + EM GV + + FP VLKAC+ + L D V
Sbjct: 62 GFHKEALLAFNEMCTLGVKSNEFTFPTVLKACS-IKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N+++ MY+KCG + ++F + E V SWN++ SC+V + V++ + M
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKV 180
Query: 200 EP-----------------------------------DVVTRNTVMDAYCRMGLVSEASK 224
P D + N ++D Y + G + +A
Sbjct: 181 RPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVD 240
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
VF ++ P+ +SW +I+G + ++L + EM G P+ LS L +C +G
Sbjct: 241 VFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSC-PNVFTLSSALKACAAMG 299
Query: 285 ALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G++IH +KI + + G L+ LY++
Sbjct: 300 LKDLGRQIHSCSVKIDSDSDLFVAVG--LIDLYSK 332
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 44/355 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L AC+ + + +H ++ G F L+ +YA + A +FR++
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMI 246
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P+ ++ +I+A H + EM+ G P+ + LKACA + L +
Sbjct: 247 HPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMG-LKDLGR 305
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD-VFSWNSMMSCYVCN 181
DL V ++D+YSKC ++ A R +D M +D + + N+++S Y
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQC 365
Query: 182 GLSQRAVEV---LESMRVD--------------------------------GCEPDVVTR 206
G ++A+ + L +D G D
Sbjct: 366 GDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVI 425
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGM 265
N+++D Y + + EASK+FE+ +++++T++I+ YS G +L ++ +M V D
Sbjct: 426 NSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVAD-- 483
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ PD S +L +C L A GK++H + +K +IF A +L+ +YA+
Sbjct: 484 IKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIF---ASNSLVNMYAK 535
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 19/306 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++ ACS ++ + KQ+H + G + + + ++ +YA C L A F +
Sbjct: 323 LVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ 382
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QP+V +TSI+ + ++G + Y +M+ + V P+ VL+AC+ LAAL +
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL-DQGK 441
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ + +++ MY+KCG ++ +F M RDV SWN+M+S NG
Sbjct: 442 QMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNG 501
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
+A+E+ E M ++G +PD VT ++ A MGLV + F+ + D P V +
Sbjct: 502 HGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHY 561
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ S G+ +N+ F ++ + L R L L + K Y L
Sbjct: 562 ACMVDILSRAGK-----------LNEAKEFIESATVDHGLCLWRIL--LGACKNHRNYEL 608
Query: 298 KIMPGE 303
+ GE
Sbjct: 609 GVYAGE 614
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 157/354 (44%), Gaps = 45/354 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL---PQ 63
L C+ +K++ + + LH +L GS + T + +YA + L A +LF + +
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 64 PNVFAFTSILAFHSRHGLARQ--CIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEX 120
+V + I AF H + I + M R V P+ + V A + L+ ++
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVV-A 136
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V +S+L+MY K G V A ++FD M ER+ SW +M+S Y
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196
Query: 181 NGLSQRAVEVLESMR-----------------------------------VDGCEPDVVT 205
+ ++ +AVEV E MR +G V
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N ++ Y + G + +A + FE D N I+W+ +++GY+ G +L +F +M + G
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSG- 315
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V P L GV+ +C L A+ GK++H + K+ G Y +A++ +YA+
Sbjct: 316 VLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLY--VLSAVVDMYAK 367
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 153/352 (43%), Gaps = 44/352 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + A S + KQ H + G + + L+ +Y + A LF ++P
Sbjct: 121 LAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP 180
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N ++ ++++ ++ +A + +E + MR + + + VL A +
Sbjct: 181 ERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTS-DVFVYTGR 239
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V N+++ MY+KCG ++ A R F+ +++ +W++M++ Y G
Sbjct: 240 QVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGG 299
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
S +A+++ M G P T +
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLS 359
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
V+D Y + G +++A K FE ++ P+V+ WT++I+GY G + L ++ +M + V
Sbjct: 360 AVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQME-RVI 418
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG----YGLKIMPGEIFYRSAGAALLT 315
P+ ++ VL +C L AL GK++H YG K+ E+ SA +A+ T
Sbjct: 419 PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKL---EVPIGSALSAMYT 467
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 14/320 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSL--FRQ 60
L S L C + +NQ KQ+ M+L G + ++L+ + + +SL F
Sbjct: 47 LESKLHRC---QWVNQFKQILSQMILTGYITDTYAASRLVNFSTHSNFIPFQYSLKIFNH 103
Query: 61 LPQPNVFAFTSILAFH-SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
L PN F + +I+ H H +Q + Y F+ SPD Y +P +L++C + E
Sbjct: 104 LHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARVSEPE 163
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V N+++++Y+ CG++ A +VF E D+ SWN++++ YV
Sbjct: 164 -GKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYV 222
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
G A V + M V + + N+++ + + G +++A +F++I+ +++SW+
Sbjct: 223 NLGDVVEAECVYDKMPVR----NTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSA 278
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+IS Y G +L +F +M +G++ + +S + +C L A+ G+ +HG KI
Sbjct: 279 MISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAI-SACTSLSAVRMGRSVHGLAAKI 337
Query: 300 MPGEIFYRSAGAALLTLYAR 319
G Y S AL+ LY+
Sbjct: 338 --GIQDYVSLQNALIHLYSN 355
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 10/248 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+I Y C + A LF + + +V +++++++ +++HG + + + EM+ G+
Sbjct: 378 NSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIR 437
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD V+ AC +AAL + ++ + +++DMY KCG VE A
Sbjct: 438 PDETAIVSVISACTHMAAL-DLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALE 496
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VF M E+ V +WN+++ NGL ++++ V M+ P+ +T V+ A MGL
Sbjct: 497 VFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGL 556
Query: 219 VSEASKVF-----EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
V E + F E +PNV + ++ +GR G+ L E++ + PD
Sbjct: 557 VDEGRRYFSSMTQEHKIEPNVKHYGCMV---DLLGRAGL-LKEAEELIESMPMAPDVATW 612
Query: 274 SGVLVSCR 281
+L +CR
Sbjct: 613 GALLGACR 620
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 139/356 (39%), Gaps = 107/356 (30%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL++C+A S + KQ+H +++ G + LI +YA C ++ SAH +F++ +
Sbjct: 151 LLRSCTARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLD 210
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++LA + G + Y +M +
Sbjct: 211 LVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIAS------------------------- 245
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
NS++ ++ K G + A +FD + +D+ SW++M+SCY NG+ +
Sbjct: 246 ---------------NSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCE 290
Query: 186 RAVEVLESMRVD-----------------------------------GCEPDVVTRNTVM 210
A+ + M + G + V +N ++
Sbjct: 291 EALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALI 350
Query: 211 DAYCRMGLVSEASKV-------------------------------FEQIKDPNVISWTT 239
Y G + +A K+ F+ + + +V+SW+
Sbjct: 351 HLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSA 410
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ISGY+ G ++ +F+EM G + PD A+ V+ +C + AL GK IH Y
Sbjct: 411 MISGYAQHGCFSEAVALFQEMQLLG-IRPDETAIVSVISACTHMAALDLGKWIHAY 465
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 66/323 (20%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
R + +I ++ + A SLF ++ ++ +++++++ + ++G+ + + + +M
Sbjct: 240 RNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDM 299
Query: 93 RFKGVSPDGYVFPKVLKACAQLAAL--------------------LEXXXXX-------- 124
GV D V + AC L+A+ L+
Sbjct: 300 NANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEI 359
Query: 125 --XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL NS++ Y CG VE A ++FD M E+DV SW++M+S Y +G
Sbjct: 360 LDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHG 419
Query: 183 LSQRAVEVLESMRVDGCEPD-----------------------------------VVTRN 207
AV + + M++ G PD V+
Sbjct: 420 CFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGT 479
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++D Y + G V A +VF +++ V +W LI G + G SL +F +M
Sbjct: 480 TLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADM-KKTKTL 538
Query: 268 PDAGALSGVLVSCRCLGALASGK 290
P+ GVL +CR +G + G+
Sbjct: 539 PNEITFMGVLGACRHMGLVDEGR 561
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ AC+ +L+ K +H Y+ + + T L+ +Y C + +A +F + +
Sbjct: 445 SVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEK 504
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V + +++ + +GL + + +A+M+ P+ F VL AC + + E
Sbjct: 505 GVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYF 564
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMM 175
+++ ++D+ + G ++ A + + M DV +W +++
Sbjct: 565 SSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALL 616
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC-DDLRSAHSLFRQL 61
L +LL AC+ + K++H Y G F+ LI +Y +C L A +F
Sbjct: 276 LIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGS 335
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V ++SI+ ++R G + + ++ + +MR + P+ V+ AC L++ +
Sbjct: 336 SLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSF-KHG 394
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ VCN++++MY+KCG ++ + ++F EM RD +WNSM+S Y +
Sbjct: 395 GVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLH 454
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVIS- 236
G ++A++ M+ G + D VT V+ A GLV+E ++FEQ+ P I
Sbjct: 455 GYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEH 514
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+ LI + G+ +L I R M P A S ++ SC+ G L
Sbjct: 515 YACLIDLHGRSGKLEDALEILRTMPMK----PSARIWSSLVSSCKLHGRL 560
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 44/261 (16%)
Query: 80 GLARQCIETYAEMRFKG--VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
GL Q ++ + ++ F + +V P V+KAC+ D
Sbjct: 43 GLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACS-FTHFHAFGTQLHCLAFITGSYTDP 101
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
V NS++ MY+K D+E A +VFD M RD +WNSM++ Y+ NGL A+++L+
Sbjct: 102 IVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFL 161
Query: 198 GCEP----------------------------------------DVVTRNTVMDAYCRMG 217
G P V +D Y R G
Sbjct: 162 GFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCG 221
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
A VF++++ N +SWT +ISG ++ + V+L +REM +G V P+ L +L
Sbjct: 222 DSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEG-VSPNRVTLIALL 280
Query: 278 VSCRCLGALASGKEIHGYGLK 298
+C G + GKEIHGY +
Sbjct: 281 AACARPGFVKYGKEIHGYAFR 301
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 147/359 (40%), Gaps = 47/359 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+++ACS + QLH + GS+ P + +I +YA D+ SA +F +P
Sbjct: 69 LPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMP 128
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + S++ + ++GL + ++ + F G P + ++ C + L
Sbjct: 129 HRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDL--GWR 186
Query: 123 XXXXXXXXXXXXXDLRVCNSV------LDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
+R+ +SV +D Y +CGD A VFDEM ++ SW +++S
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSE--------------- 221
N A+ M+V+G P+ VT ++ A R G V
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
Query: 222 ---------------------ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
A ++FE +V+ W+++I Y+ G +L +F +M
Sbjct: 307 CHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM 366
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ P+ L V+ +C L + G IHGY LK G F AL+ +YA+
Sbjct: 367 RTEETE-PNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIG--FSIFVCNALINMYAK 422
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 40 KLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP 99
+LI++ + D A LF +PQP+ +++++ + HGL+ + I+ Y+ ++ +G+ P
Sbjct: 17 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
D VF KACA L D+ V N+++ Y KC VEGA RV
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMS-DVFVGNALIHAYGKCKCVEGARRV 135
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA------- 212
FD++ RDV SW S+ SCYV G ++ ++V M G +P+ +T ++++ A
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195
Query: 213 ----------------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
Y + V EA VF+ + +V+SW +++ Y
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC----RCLGALASGKEIHGYGLKIM 300
+ +F +M DG V D + V+ C R A+ +++ G K
Sbjct: 256 FKNKEYEKGFSLFLKMSRDG-VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK-- 312
Query: 301 PGEI 304
P EI
Sbjct: 313 PNEI 316
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 138/321 (42%), Gaps = 45/321 (14%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M ++S+L AC+ K L K++H + + HG F + L+ +YA C +R A +F
Sbjct: 180 MTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDL 239
Query: 61 LPQPNVFAFTSILAFH----------------SRHGL-------------------ARQC 85
+P +V ++ +L + SR G+ + +
Sbjct: 240 MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 299
Query: 86 IETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLD 145
+E + +M+ G P+ +L AC+ + L DL ++L
Sbjct: 300 VEMFRKMQKMGFKPNEITISSILPACS-FSENLRMGKEIHCYVFRHWKVGDLTSTTALLY 358
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
MY+KCGD+ + VFD MR +DV +WN+M+ +G + A+ + + M + +P+ VT
Sbjct: 359 MYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVT 418
Query: 206 RNTVMDAYCRMGLVSEASKVF-----EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
V+ LV E ++F + + +P+ ++ ++ YS GR + + M
Sbjct: 419 FTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM 478
Query: 261 VNDGMVFPDAGALSGVLVSCR 281
+ P A A +L +CR
Sbjct: 479 PME----PTASAWGALLAACR 495
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 35/312 (11%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
+AC+ S + K++H G F LI Y C + A +F L +V
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
++TS+ + + + G R+ ++ + EM + GV P+ +L ACA+L L +
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL-KSGKEIHGF 204
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+L VC++++ +Y+KC V A VFD M RDV SWN +++ Y N ++
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
+ M DG D T N V I G
Sbjct: 265 FSLFLKMSRDGVRADEATWNAV-------------------------------IGGCMEN 293
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR 307
GR ++ +FR+M G P+ +S +L +C L GKEIH Y + ++
Sbjct: 294 GRSEEAVEMFRKMQKMGFK-PNEITISSILPACSFSENLRMGKEIHCYVFR--HWKVGDL 350
Query: 308 SAGAALLTLYAR 319
++ ALL +YA+
Sbjct: 351 TSTTALLYMYAK 362
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD-------- 202
GD A ++FD + + D + ++++S +GLS A+++ S++ G +PD
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 203 ---------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
V N ++ AY + V A +VF+ + +V+
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SWT+L S Y G + +FREM G V P+ +S +L +C L L SGKEIHG+
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSG-VKPNPMTVSSILPACAELKDLKSGKEIHGF 204
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
++ G + +AL++LYA+
Sbjct: 205 AVR--HGMVVNLFVCSALVSLYAK 226
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV--FAFTSI 72
+L QA+Q+H ++L +H F + +LI Y+ + + A +F P ++ + SI
Sbjct: 38 TLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSI 97
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ + HG ++ Y +M G PDG+ P ++K+C+++ ++
Sbjct: 98 IRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSV-GLCKIVHCHVLETG 156
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
+ V N ++ MY K +E A +VFD M R V SWN+++S Y N A V +
Sbjct: 157 FKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFK 216
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
M ++G EP+ VT +++ ++ R GL E ++F+ ++ I G G
Sbjct: 217 RMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMR----------IKGIEISGE--- 263
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAA 312
A++ VL C + + GKEIHG+ +K G Y A
Sbjct: 264 -------------------AVAVVLSVCADMDGVQRGKEIHGFVIK--GGYEDYLFVKNA 302
Query: 313 LLTLYAR 319
L+ +Y +
Sbjct: 303 LIGIYGK 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 41 LIQIYADCDDLRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
L+ YA D A +F+++ +PN +TS+L+ H+R GL + +E + MR KG
Sbjct: 198 LVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKG 257
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC-GDVEG 155
+ G VL CA + + + L V N+++ +Y K D+
Sbjct: 258 IEISGEAVAVVLSVCADMDGV-QRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGD 316
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV-LESMRVDGCEPDVVTRNTVMDAYC 214
A ++F +++ + + SWN+++S Y +GL A EV L+ + +G P
Sbjct: 317 AHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSP------------- 363
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
PNVISW+ +ISG++S GR SL +FR+M V + +S
Sbjct: 364 ---------------VRPNVISWSAVISGFASKGRLEKSLELFRQM-QLAKVMANCVTIS 407
Query: 275 GVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
VL C L AL G+E+H Y ++ +M I G L+ +Y +
Sbjct: 408 SVLSVCAELAALNLGRELHAYAIRNLMDDNIL---VGNGLVNMYMK 450
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 41 LIQIYAD---CDDLRSAHSLFRQLPQ--------PNVFAFTSILAFHSRHGLARQCIETY 89
LI YAD CDD A+ +F +L + PNV +++++++ + G + +E +
Sbjct: 335 LISSYADSGLCDD---AYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELF 391
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
+M+ V + VL CA+LAAL ++ V N +++MY K
Sbjct: 392 RQMQLAKVMANCVTISSVLSVCAELAAL-NLGRELHAYAIRNLMDDNILVGNGLVNMYMK 450
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
CG E A VFD ++ RD+ SWNS++ Y +GL + AV + M G PD +T V
Sbjct: 451 CGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAV 510
Query: 210 MDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ A GLV+ +F+++ +P V + ++ +GR G+ L ++V +
Sbjct: 511 LSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMV---DLLGRAGL-LQEAHDIVRNM 566
Query: 265 MVFPDAGALSGVLVSCR 281
+ P+ +L SCR
Sbjct: 567 PIEPNECVWGALLNSCR 583
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L C+ +LN ++LH Y + + L+ +Y C AH +F +
Sbjct: 406 ISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIK 465
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
++ ++ S++ + HGL + T+ EM G+ PD F VL AC+
Sbjct: 466 GRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSH 516
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 40/329 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC SL K++H + G F L+ +Y+ L AH +F +P +
Sbjct: 130 ILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ ++++ ++G A + M+ +GV D +L CAQ ++
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHL 246
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ V N++++MYSK G ++ A VFD+M RD+ SWNS+++ Y N
Sbjct: 247 HVLKHGLDS-DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPS 305
Query: 186 RAVEVLESMRVDGCEP------------------------------------DVVTRNTV 209
A+ + M++ G P DVV N +
Sbjct: 306 TALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNAL 365
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
++ Y ++G ++ A VF+Q+ + ISW TL++GY+ G ++ + M P+
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPN 425
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLK 298
G ++ + +GAL G +IH +K
Sbjct: 426 QGTWVSIIPAYSHVGALQQGMKIHAKLIK 454
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 47/306 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+L +C ++N K+LH +L+ G + +TKLI +Y D+ + S F +
Sbjct: 25 FNALFNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 63 QPNVFAFTSILAFHSRHGL---ARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALL 118
+ N+F++ SI++ + R G A C+ M G + PD Y FP +LKAC L
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV--- 138
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V S++ +YS+ G ++ A +VF +M +DV SWN+M+S +
Sbjct: 139 -DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF 197
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVT--------------------------------- 205
NG + A+ VL M+ +G + D +T
Sbjct: 198 CQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDV 257
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N +++ Y + G + +A VF+Q++ +++SW ++I+ Y +L F+ M
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM-QL 316
Query: 264 GMVFPD 269
G + PD
Sbjct: 317 GGIRPD 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF-KGVSP 99
L+ +YA + AH++F QLP+ + ++ +++ ++++GLA + I+ Y M + P
Sbjct: 365 LVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP 424
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ + ++ A + + AL + D+ V ++D+Y KCG +E A +
Sbjct: 425 NQGTWVSIIPAYSHVGAL-QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F E+ WN++++ +G + A+++ + M + + D +T +++ A GLV
Sbjct: 484 FYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLV 543
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E K F+ ++ P++ + ++ +GR G L E+V + + PDA
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKHYGCMV---DLLGRAGY-LEKAYELVRNMPIQPDASIWG 599
Query: 275 GVLVSCRC-----LGALASGK 290
+L +C+ LG LAS +
Sbjct: 600 ALLSACKIYGNAELGTLASDR 620
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV---------------- 179
++ + ++++Y GD+ + FD + ++++FSWNS++S YV
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 180 --CNGLSQRA------------VEVLESMRVDGC------EPDVVTRNTVMDAYCRMGLV 219
C G R V +++ +V C E DV +++ Y R G++
Sbjct: 113 SMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVL 172
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
A KVF + +V SW +ISG+ G +LG+ M +G+ D ++ +L
Sbjct: 173 DVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKM-DTITVASILPV 231
Query: 280 CRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
C + +G IH + LK + ++F AL+ +Y++
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVF---VSNALINMYSK 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ A S +L Q ++H ++ + + F T LI +Y C L A SLF ++P+
Sbjct: 431 SIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD 490
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +I+A HG + ++ + +M + V D F +L AC+ + E
Sbjct: 491 TSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
L+ ++D+ + G +E A + M + D W +++S
Sbjct: 551 DIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 12/263 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIY---ADCDDLRSAHSLFRQ 60
L Q + +K+++ KQ+H L H P FF L ++ A+ +L AH LF
Sbjct: 13 LNQFLNNAKNISHLKQIHALFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLFDT 72
Query: 61 LPQ-PNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+P N F +TS++ AF S H CI T+A M KG+ P G+ F VL AC ++ A
Sbjct: 73 MPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGF 132
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E + V ++LDMY+KCG V A VFD + +RDV +W +M+ Y
Sbjct: 133 EGKQVHARLVQSGFLGNKI-VQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGY 191
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
G A + ++M E + T T++ Y G + A ++++ + + ++W
Sbjct: 192 AKAGRMVDARFLFDNMG----ERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWV 247
Query: 239 TLISGYSSVGRHGVSLGIFREMV 261
+I+GY +G + IF E+
Sbjct: 248 AMIAGYGKLGNVSEARRIFDEIT 270
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 129/269 (47%), Gaps = 11/269 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP 99
+I Y ++ A +F ++ P N ++LA ++++G AR+ IE Y +MR +
Sbjct: 249 MIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKV 308
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ ACAQL + + V N+++ M SKCG+++ A R
Sbjct: 309 TDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHI-VSNALIHMQSKCGNIDLAWRE 367
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F+ MR RD++++++M++ + +G SQ A+++ M+ +G +P+ VT V++A GL+
Sbjct: 368 FNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLI 427
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F+ + +P +T ++ +GR G L ++ + DA
Sbjct: 428 EEGCRFFQIMTEMYGIEPLPEHYTCMV---DLLGRAG-QLEKAYSLIKENSTSADATTWG 483
Query: 275 GVLVSCRCLGALASGKEIHGYGLKIMPGE 303
+L +CR G + G+ + +I P +
Sbjct: 484 SLLAACRVYGNVELGEIAARHLFEIDPTD 512
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 137/327 (41%), Gaps = 68/327 (20%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH------- 55
L S L++CS+ ++Q +Q+H + G H F LI +YA C D+++A
Sbjct: 56 LVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFA 115
Query: 56 ------------------------SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
LF +P ++T+++ ++G R+ +E + +
Sbjct: 116 TLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKD 175
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
MR GV P+ V+ AC+ L +L + V +++ Y C
Sbjct: 176 MRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVI-VSTNLMHAYCLCS 234
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
V A R+FDEM ER++ +W N +++
Sbjct: 235 GVREARRLFDEMPERNLVTW-----------------------------------NVMLN 259
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + GLV EA ++F+ I D +VISW T+I GY GR +L I+R M+ G P+
Sbjct: 260 GYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGH-GPNEV 318
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLK 298
+ ++ +C A+ G ++HG +K
Sbjct: 319 MIVNLVSACGRGTAIVDGWQLHGTVVK 345
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 139/325 (42%), Gaps = 45/325 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---------------D 49
+L+ AC ++ QLH ++ G F T +I YA C D
Sbjct: 322 NLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKD 381
Query: 50 DLRSAHSL----------------FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR 93
L S ++L F ++ +VF+++++++ +++ + +E + +M
Sbjct: 382 HLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKML 441
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGD 152
G+ P+ V A A L L E D LR +++DMY+KCG
Sbjct: 442 AGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRA--ALIDMYAKCGS 499
Query: 153 VEGAARVFDEMRER--DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
+ A + F+++R+ V WN+++ +G + +EV M+ +P+ +T V+
Sbjct: 500 INSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVL 559
Query: 211 DAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A C GLV ++F+ +K +P++ + +I +GR G+ L EM+
Sbjct: 560 SACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMI---DILGRAGL-LEEAEEMIRSMP 615
Query: 266 VFPDAGALSGVLVSCRCLGALASGK 290
+ D +L +CR G + G+
Sbjct: 616 MEADIVIWGTLLAACRTHGNVNIGE 640
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 124/315 (39%), Gaps = 74/315 (23%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLA--------------- 82
+T L+ Y C +R A LF ++P+ N+ + +L +++ GL
Sbjct: 223 STNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDV 282
Query: 83 ----------------RQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
R+ +E Y M G P+ + ++ AC + A+++
Sbjct: 283 ISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGT 342
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ + +++ Y+ CG ++ A F+ + + SWN++ + ++ NG+
Sbjct: 343 VVKRGFDCYNF-IQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDH 401
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS 246
A+ K F+++ +V SW+T+ISGY+
Sbjct: 402 AL-----------------------------------KTFDKMHVRDVFSWSTMISGYAQ 426
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI-- 304
++L +F +M+ G + P+ + V + LG L GK H Y M E
Sbjct: 427 SEHPKMALELFHKMLAGG-IKPNEVTMVSVFSAIATLGTLQEGKLAHEY----MRSESIP 481
Query: 305 FYRSAGAALLTLYAR 319
F + AAL+ +YA+
Sbjct: 482 FNDNLRAALIDMYAK 496
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 43/336 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG--SHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
L LL++C + SL QA +H ++L G F ++ Y+ C D SA +F
Sbjct: 69 LIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDG 128
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + NVF++T ++ + HG R +E + M +G+ DG+ F VL++C L +++
Sbjct: 129 MSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFG 188
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V S+L++Y+K G E + VF+ M + + SWN+M+S +
Sbjct: 189 EMVHAQVVVRGFLMHAV-VGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTS 247
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT------------------------------RNT-- 208
NGL +A + L +M +G P+ T NT
Sbjct: 248 NGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSV 307
Query: 209 ---VMDAYCRMGLVSEASKVFEQIKDPNVI---SWTTLISGYSSVGRHGVSLGIFREMVN 262
+++ Y + G++ +A +F+ K N + W +I+GYS G H +L +F M
Sbjct: 308 GTALINMYSKCGVLCDARVLFDS-KFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQ 366
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ V PD V S L L S KE HG LK
Sbjct: 367 ND-VKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALK 401
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 133/314 (42%), Gaps = 38/314 (12%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF-RQLPQPNVFA-FTSIL 73
+N+ ++H Y G T LI +Y+ C L A LF + V A + +++
Sbjct: 286 INRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMI 345
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
+S+ G + +E + M V PD Y F V + A L L
Sbjct: 346 TGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFD 405
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
++ V N++ D Y KC +E +VF +M ++D+ SW +M++ Y +A+ +
Sbjct: 406 AMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQ 465
Query: 194 MRVDGCEPDVVTRNTV-----------------------------------MDAYCRMGL 218
M +G P+ T ++V +D Y + G
Sbjct: 466 MCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGN 525
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
++EA +FE+I +P+ ++WT +IS Y+ G +L +FR+M V +A L +L
Sbjct: 526 LTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKM-EQSAVKANAVTLLCILF 584
Query: 279 SCRCLGALASGKEI 292
+C G + G EI
Sbjct: 585 ACSHGGMVEDGLEI 598
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 119/255 (46%), Gaps = 10/255 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L Y C+ L + +F ++ + ++ ++T+++ + + + + +++M +G +P+
Sbjct: 415 LADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPN 474
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ F V+ AC L LLE + + ++++DMYSKCG++ A +F
Sbjct: 475 HFTFSSVITACGGLC-LLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIF 533
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ + D +W +++S Y +GL + A+++ M + + VT ++ A G+V
Sbjct: 534 ERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVE 593
Query: 221 EASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
+ ++F Q++ P + + ++ VGR ++ +M + PD
Sbjct: 594 DGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMP----IEPDEMVWQT 649
Query: 276 VLVSCRCLGALASGK 290
+L +CR G G+
Sbjct: 650 LLGACRIHGNAELGE 664
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
G ++V N V+ AY + A KVF+ + + NV SWT +I + G + +L +F
Sbjct: 98 GDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELF 157
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
M+ G++ D A S VL SC L ++ G+ +H ++ G + + G +LL LY
Sbjct: 158 CMMLEQGLLL-DGFAFSAVLQSCVGLDSVVFGEMVHAQ--VVVRGFLMHAVVGTSLLNLY 214
Query: 318 AR 319
A+
Sbjct: 215 AK 216
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 100/234 (42%), Gaps = 2/234 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S++ AC L +Q+H + + + LI +Y+ C +L A ++F ++
Sbjct: 478 FSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERIS 537
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P+ +T+I++ +++HGL ++ + +M V + +L AC+ + +
Sbjct: 538 NPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLE 597
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
++ V+D+ + G ++ A D+M E D W +++ +
Sbjct: 598 IFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIH 657
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
G ++ + + EP+ + ++ + Y GL+ + + + +K+ +
Sbjct: 658 GNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGI 711
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++++A + + +Q+H +L + PF LI +Y+ C ++ A +F Q+PQ
Sbjct: 229 AMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQK 288
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +I+A ++ G + + + Y +MR G D + V+ CA+LA+L E
Sbjct: 289 TTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASL-EHGKQG 347
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL +++++ YSK G +E A VFD+M +++ SWN++++ Y +G
Sbjct: 348 HAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRG 407
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
+ A+E+ E M + P+ VT V+ A GL ++F+ + P + +
Sbjct: 408 EEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYAC 467
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+I +GR G+ L ++ + P + +L++CR L GK
Sbjct: 468 MI---ELLGREGL-LDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGK 514
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 142/324 (43%), Gaps = 37/324 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++L+ AC +S+ K++ +YM G + +++ ++ C+ +R A + F +P+
Sbjct: 127 DALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPE 186
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ +++ + E + M + + F +++A A+L +E
Sbjct: 187 RDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDC-IEVGRQ 245
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V +++DMYSKCG++E A VFD+M ++ WN++++ Y G
Sbjct: 246 IHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGF 305
Query: 184 SQRAVEVLESMRVDGCE-----------------------------------PDVVTRNT 208
S+ A+ + MR G + D+V +
Sbjct: 306 SEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSA 365
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+++ Y + G + A VF+++ N+ISW LI+GY GR ++ +F +M+ + M P
Sbjct: 366 LVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMT-P 424
Query: 269 DAGALSGVLVSCRCLGALASGKEI 292
+ VL +C G G EI
Sbjct: 425 NHVTFLAVLSACSYSGLSERGWEI 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 50/225 (22%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM-------------SCYVC-- 180
DL + N VL M+ +C + A FD+M ERD SW +M+ ++C
Sbjct: 157 DLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMW 216
Query: 181 ----NGLSQR-AVEVLESMRVDGCE---------------PDVVTRNTVMDAYCRMGLVS 220
NG S+ A V S R+D E D ++D Y + G +
Sbjct: 217 EEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIE 276
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+A VF+Q+ + W T+I+GY+ G +LGI+ +M + G D +S V+ C
Sbjct: 277 DARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKI-DHFTISIVITIC 335
Query: 281 RCLGALASGKEIH------GYGLKIMPGEIFYRSAGAALLTLYAR 319
L +L GK+ H G+G ++ A +AL+ Y++
Sbjct: 336 ARLASLEHGKQGHAALVRRGFGTDLV--------ANSALVNFYSK 372
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 142/331 (42%), Gaps = 43/331 (12%)
Query: 12 ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
A + +Q H ++++ G HR TKL+ + + + LF + P+ F F S
Sbjct: 27 AGPHIRPLQQAHAHLIVSGRHRSRALLTKLLTLSSAAGSIAYTRRLFLSVTDPDSFLFNS 86
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ S+HG + I Y M P Y F V KACA L+A L+
Sbjct: 87 LIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSA-LKIGTILHSHVFVS 145
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
+ V +++ Y+K + A +VFD+M +R V +WN+M+S Y NGL+ A+ +
Sbjct: 146 GFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLF 205
Query: 192 ESMRVDGCEPD-----------------------------------VVTRNTVMDAYCRM 216
M G PD V+ ++++ + R
Sbjct: 206 RKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRC 265
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
G V A VF+ I + NVI+WT +ISGY G ++ +F EM + + P+ V
Sbjct: 266 GDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAV 325
Query: 277 LVSCRCLGALASGKEIHG-----YGLKIMPG 302
L +C G + G+++ YGL +PG
Sbjct: 326 LSACAHAGLIHEGRQVFASMREEYGL--VPG 354
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S+ +AC+ +L LH ++ + G F ++ YA L A +F ++P
Sbjct: 119 FTSVFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMP 178
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q +V A+ ++++ + +GLA + + + +M GV PD F V AC+Q+ + LE
Sbjct: 179 QRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGS-LELGC 237
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ + S+++M+S+CGDV A VFD + E +V +W +M+S Y +G
Sbjct: 238 WVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHG 297
Query: 183 LSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
A+E+ M+ + G P+ VT V+ A GL+ E +VF +++
Sbjct: 298 YGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMRE 347
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 143/330 (43%), Gaps = 48/330 (14%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF------RQLPQP 64
S +L++ Q+H ++L G P TK ++ + + A S P P
Sbjct: 26 SHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTP 85
Query: 65 NVFAF---TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ AF T I A+ Y M GV+P+ + FP VLK CA + + L
Sbjct: 86 SYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGS-LRLG 144
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD--VEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V N+++ MY G+ E A +VFD+ + D +W++M++ +V
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTR--------------------------------- 206
G S RAV++ M+V G PD +T
Sbjct: 205 RLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVE 264
Query: 207 --NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
N ++D + + G V +A K+F Q+ ++SWT++I+G + GR ++ +F EMV +G
Sbjct: 265 LCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG 324
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+ PD A GVL +C G + G+ G
Sbjct: 325 IT-PDDVAFIGVLSACSHSGLVDKGRYYFG 353
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 146/339 (43%), Gaps = 44/339 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---DDLRSAHSLFRQLP 62
+L+ C+ SL K +H ++ G LI +Y C D A +F P
Sbjct: 131 VLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC-CLGEDGFEFAEKVFDDSP 189
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +++++A R G + + ++ + EM+ GV PD VL ACA L AL E
Sbjct: 190 KMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGAL-ELGK 248
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ +CN+++DM++KCG+V+ A ++F +M R + SW S+++ +G
Sbjct: 249 WVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHG 308
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-------------------------RN---------- 207
AV + + M +G PD V RN
Sbjct: 309 RGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY 368
Query: 208 -TVMDAYCRMGLVSEASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMV-NDG 264
++D CR G V EA + +++ +PN I W T+I+ + G + I +E++ ++
Sbjct: 369 GCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEP 428
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGY-GLKIMPG 302
M + LS + R +E+ G+K +PG
Sbjct: 429 MHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPG 467
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 51/307 (16%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL-A 74
+NQ KQ H Y L + KL+QI +L A L +P F + ++ A
Sbjct: 1 MNQVKQFHGYTLRNNIDNTKILIEKLLQI----PNLNYAQVLLHHSQKPTTFLYNKLIQA 56
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
S+H QC Y++M G SP+ Y F + C L++L
Sbjct: 57 CSSKH----QCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSL-SLGQMIHTQFMKSGFK 111
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
D+ ++LDMY+K G ++ A VFDEM +++ +WN+MM+
Sbjct: 112 HDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMA------------------ 153
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
GC R G + A ++F + NV+SWTT++SGY ++ +L
Sbjct: 154 ---GC--------------TRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKAL 196
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGA--A 312
G+F M + V P+ L+ VL +C LGAL G+ + Y K F+++ A
Sbjct: 197 GLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARK----NGFFKNLFVCNA 252
Query: 313 LLTLYAR 319
+L +YA+
Sbjct: 253 VLEMYAK 259
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 35/267 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD------------- 49
N L C++ SL+ + +H + G F +T L+ +YA
Sbjct: 82 FNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMS 141
Query: 50 ------------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
D+ A LF +P NV ++T++++ + ++ + + +
Sbjct: 142 VKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMR 201
Query: 92 M-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
M R K VSP+ VL ACA L AL E +L VCN+VL+MY+KC
Sbjct: 202 MEREKDVSPNEVTLASVLPACANLGAL-EIGQRVEVYARKNGFFKNLFVCNAVLEMYAKC 260
Query: 151 GDVEGAARVFDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
G ++ A +VFDE+ R R++ SWNSM+ +G +A+++ + M +G PD VT +
Sbjct: 261 GKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGL 320
Query: 210 MDAYCRMGLVSEASKVFEQI-KDPNVI 235
+ A G+V + VF+ + +D N+I
Sbjct: 321 LLACTHGGMVEKGKHVFQSMTRDFNII 347
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 14/318 (4%)
Query: 7 LQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+AC + + S KQLH ++ G T L+++YA +L AH +F ++P+ N
Sbjct: 82 LKACINKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKN 141
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +TS+++ + + + + +E + M V PD V L ACA L
Sbjct: 142 IICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHD 201
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
DL + N++++MY+KCGD+ A ++FD R +DV +W SM+ + +G ++
Sbjct: 202 FVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAR 261
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+++ M P+ VT V+ A GLV E + F + +P + +
Sbjct: 262 EALQLFSEMNFI-VSPNDVTFIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREPHFGCM 320
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ + G + EM V P+A +L +C G L E+ + +
Sbjct: 321 VDLFCRSGHLREAYDFIMEMP----VPPNAVMWRTLLGACSLHGNLKLATEVRDKLINLD 376
Query: 301 PGEIFYRSAGAALLTLYA 318
PG Y AL +YA
Sbjct: 377 PG---YVGDSVALSNIYA 391
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 38/310 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ C L KQ+H +L + R + ++ Y+ C + SA F ++ + +
Sbjct: 257 FMNLCCKRVDLALGKQIHA-RILKSNWRNLIVDSAVVNFYSKCGKISSAFRTFDRMAKRD 315
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V +T+I+ S+HGL + + ++M G P+ Y LKAC + A +
Sbjct: 316 VVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAF-KCGTQLH 374
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ + S++DMY+KCG++ + +VFD M+ R+ +W S++S Y NG +
Sbjct: 375 GAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFGE 434
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDA--------------------------------- 212
A+ M+ + T VM A
Sbjct: 435 EALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLV 494
Query: 213 --YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
YCR S A V + I +V+SWT +ISG + +G +L REM+ +G V P++
Sbjct: 495 WFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEG-VLPNS 553
Query: 271 GALSGVLVSC 280
S L +C
Sbjct: 554 YTYSSALKAC 563
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 26/304 (8%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC +K+ QLH ++ F T LI +YA C ++ S+ +F ++ N
Sbjct: 358 LKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNT 417
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+TSI++ ++R+G + + + M+ K V + V+ AC + A L
Sbjct: 418 ATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASL-IGREVHA 476
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ + +++ Y +C D A V + RDV SW +++S GL
Sbjct: 477 QKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETE 536
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDA---------------------YCRMGLVSEASKV 225
A+E L M +G P+ T ++ + A Y + G +++A +V
Sbjct: 537 ALEFLREMMEEGVLPNSYTYSSALKACAKLETPALSNVFVNSALIYMYAKCGYIADAFQV 596
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
F+ + + N++SW +I GY+ G +L + M +G V D L+ VL +C G
Sbjct: 597 FDNMPERNLVSWKAMILGYARNGHCRKALQLMYRMRAEGFVVDDY-ILTTVLTAC---GG 652
Query: 286 LASG 289
+ SG
Sbjct: 653 IDSG 656
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 38/298 (12%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
+ LI Y L A +F + + N +T+I+ + ++ L + + +
Sbjct: 186 YVDNNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSIKH 245
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
GV P+ +F + C + L +L V ++V++ YSKCG +
Sbjct: 246 GVQPNSKMFVCFMNLCCKRVDL--ALGKQIHARILKSNWRNLIVDSAVVNFYSKCGKISS 303
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG----------------- 198
A R FD M +RDV W ++++ +GL A+ +L M VDG
Sbjct: 304 AFRTFDRMAKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGE 363
Query: 199 ------------------CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
C+ DV +++D Y + G + + KVF+++K N +WT++
Sbjct: 364 NKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSI 423
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
ISGY+ G +L FR M V+ + L V+ +C + A G+E+H +K
Sbjct: 424 ISGYARNGFGEEALNFFRLM-KRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIK 480
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ AC K+ +++H + + T L+ Y C D A ++ + +P +
Sbjct: 458 VMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKYIPLRD 517
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++T+I++ +R GL + +E EM +GV P+ Y + LKACA+L
Sbjct: 518 VVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKACAKLET--------- 568
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V ++++ MY+KCG + A +VFD M ER++ SW +M+ Y NG +
Sbjct: 569 ------PALSNVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHCR 622
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDA 212
+A++++ MR +G D TV+ A
Sbjct: 623 KALQLMYRMRAEGFVVDDYILTTVLTA 649
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N+++ Y + G + A +VFD M R+ +W +++ Y+ L A ++ G +
Sbjct: 189 NNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSIKHGVQ 248
Query: 201 PD----------------------------------VVTRNTVMDAYCRMGLVSEASKVF 226
P+ ++ + V++ Y + G +S A + F
Sbjct: 249 PNSKMFVCFMNLCCKRVDLALGKQIHARILKSNWRNLIVDSAVVNFYSKCGKISSAFRTF 308
Query: 227 EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+++ +V+ WTT+I+ S G +L + +M+ DG FP+ + L +C A
Sbjct: 309 DRMAKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGF-FPNEYTICAALKACGENKAF 367
Query: 287 ASGKEIHGYGL-KIMPGEIFYRSAGAALLTLYAR 319
G ++HG + KI ++F G +L+ +YA+
Sbjct: 368 KCGTQLHGAIVKKICKSDVF---IGTSLIDMYAK 398
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 140/314 (44%), Gaps = 56/314 (17%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDL---RSAHSLFRQLPQPNVFAFTSI 72
+ Q K++H +++ + F TK++ CD+L A LF+QL PN+F + +I
Sbjct: 23 ITQLKKIHAHVVKLSLSQSNFLVTKMLD---SCDNLGHVSYATLLFKQLLHPNIFTYNAI 79
Query: 73 LAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+ ++ + I + +M V PD + FP V+K+C +L
Sbjct: 80 IRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCT---GILCHRLGMQVHGL 136
Query: 130 XXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
D N+++DMY+K GD+ A +VF+EM RDV SWNS++ YV G A
Sbjct: 137 VYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSA 196
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
E+ + M V +V+ T++ Y RMG
Sbjct: 197 RELFDDMPV----RTIVSWTTMITGYGRMGC----------------------------- 223
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR 307
+G +L +FREM G + PD ++ VL +C LGAL GK IH Y K F R
Sbjct: 224 --YGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADK----NGFLR 276
Query: 308 SAGA--ALLTLYAR 319
G AL+ +YA+
Sbjct: 277 KTGICNALIEMYAK 290
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 31 SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
SHR LI Y + SA LF +P + ++T+++ + R G ++ +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
EM+ G+ PD VL ACAQL AL E +CN++++MY+KC
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGAL-EVGKWIHMYADKNGFLRKTGICNALIEMYAKC 291
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G ++ A +FD++ E+DV SW++M+ +G A+++ E M P+ +T V+
Sbjct: 292 GCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVL 351
Query: 211 DAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A GL E K F+ + +P + + LI +GR G LG + ++
Sbjct: 352 LACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLI---DLLGRSGC-LGQALDTISKMP 407
Query: 266 VFPDAGALSGVLVSCR 281
+ PD+ + +L SCR
Sbjct: 408 IKPDSRIWNSLLSSCR 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC+ +L K +H Y +G RK LI++YA C + A +LF QL +
Sbjct: 248 AVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEK 307
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++++++ + HG + I+ + EM V+P+ F VL AC+ E
Sbjct: 308 DVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYF 367
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYVCNG 182
++ ++D+ + G + A +M + D WNS++ SC +
Sbjct: 368 DVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRN 427
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
L + V + M + EP+ ++ + Y G + S + + I++ +
Sbjct: 428 LQIAVIAVKQLMEL---EPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRI 477
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 140/314 (44%), Gaps = 56/314 (17%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDL---RSAHSLFRQLPQPNVFAFTSI 72
+ Q K++H +++ + F TK++ CD+L A LF+QL PN+F + +I
Sbjct: 23 ITQLKKIHAHVVKLSLSQSNFLVTKMLD---SCDNLGHVSYATLLFKQLLHPNIFTYNAI 79
Query: 73 LAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+ ++ + I + +M V PD + FP V+K+C +L
Sbjct: 80 IRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCT---GILCHRLGMQVHGL 136
Query: 130 XXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
D N+++DMY+K GD+ A +VF+EM RDV SWNS++ YV G A
Sbjct: 137 VYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSA 196
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
E+ + M V +V+ T++ Y RMG
Sbjct: 197 RELFDDMPV----RTIVSWTTMITGYGRMGC----------------------------- 223
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR 307
+G +L +FREM G + PD ++ VL +C LGAL GK IH Y K F R
Sbjct: 224 --YGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADK----NGFLR 276
Query: 308 SAGA--ALLTLYAR 319
G AL+ +YA+
Sbjct: 277 KTGICNALIEMYAK 290
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 31 SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
SHR LI Y + SA LF +P + ++T+++ + R G ++ +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
EM+ G+ PD VL ACAQL AL E +CN++++MY+KC
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGAL-EVGKWIHMYADKNGFLRKTGICNALIEMYAKC 291
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G ++ A +FD++ E+DV SW++M+ +G A+++ E M P+ +T V+
Sbjct: 292 GCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVL 351
Query: 211 DAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A GL E K F+ + +P + + LI +GR G LG + ++
Sbjct: 352 LACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLI---DLLGRSGC-LGQALDTISKMP 407
Query: 266 VFPDAGALSGVLVSCR 281
+ PD+ + +L SCR
Sbjct: 408 IKPDSRIWNSLLSSCR 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 6/233 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC+ +L K +H Y +G RK LI++YA C + A +LF QL +
Sbjct: 248 AVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEK 307
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++++++ + HG + I+ + EM V+P+ F VL AC+ E
Sbjct: 308 DVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYF 367
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYVCNG 182
++ ++D+ + G + A +M + D WNS++ SC +
Sbjct: 368 DVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRN 427
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
L + V + M + EP+ ++ + Y G + S + + I++ +
Sbjct: 428 LQIAVIAVKQLMEL---EPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRI 477
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+A S S ++ +Q+H Y + G + + I +Y D SAH +F + +P
Sbjct: 103 VLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPK 162
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXXX 124
+ ++ ++++ S+ GLA I + +M+ G PDG V+ AC + L L
Sbjct: 163 LGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHK 222
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + NS++DMY KCG ++ A VF M +R+V SW SM+ Y +G +
Sbjct: 223 YVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHA 282
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ A+ MR G +P+ VT V+ A G V E F+ +K+
Sbjct: 283 KEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKN 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 43/277 (15%)
Query: 54 AHSLFRQL--PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
AH L + P F + +I+ ++R + + Y M GV PD Y P VLKA
Sbjct: 48 AHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAV 107
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNS-VLDMYSKCGDVEGAARVFDEMRERDVFS 170
+Q A+ + C S +++Y K GD + A +VFDE E + S
Sbjct: 108 SQSFAIQLGQQVHSYGIKLGLQSNEY--CESGFINLYCKAGDFDSAHKVFDENHEPKLGS 165
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------------------------- 205
WN+++S GL+ A+ V M+ G EPD +T
Sbjct: 166 WNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVF 225
Query: 206 ------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
N+++D Y + G + A +VF ++D NV SWT++I GY+ G +
Sbjct: 226 QAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEA 285
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
LG F M G V P+ GVL +C G + G+
Sbjct: 286 LGCFHCMRESG-VKPNYVTFIGVLSACVHGGTVQEGR 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 6/231 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIYADCDDLRSAHSLFRQLP 62
S++ AC + L A QLH Y+ ++ + LI +Y C + A+ +F +
Sbjct: 203 SVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATME 262
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++TS++ ++ HG A++ + + MR GV P+ F VL AC + E
Sbjct: 263 DRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRF 322
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
L+ ++D+ + G + A R+ +EM + + W +M +
Sbjct: 323 YFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKH 382
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKD 231
G A V E+++ EP V+ + Y GL E ++ +K+
Sbjct: 383 GNVDMAEWVAENLQ--ALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKE 431
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 36/186 (19%)
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------- 212
F+WN+++ Y Q A+ + SM G PD T V+ A
Sbjct: 63 FNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSY 122
Query: 213 -------------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
YC+ G A KVF++ +P + SW LISG S G +
Sbjct: 123 GIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDA 182
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
+ +F +M G PD + V+ +C +G L ++H Y + E +L
Sbjct: 183 IVVFVDMKRHGFE-PDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSL 241
Query: 314 LTLYAR 319
+ +Y +
Sbjct: 242 IDMYGK 247
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHY---MLLHGSHRKPF----FTTKLIQIYADCDDLRSAH 55
L SLL AC++ +L K+ H Y +L G H LI +YA C L A
Sbjct: 254 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 313
Query: 56 SLFRQL-PQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFK---GVSPDGYVFPKVLKA 110
++F ++ P+ +V +T ++ +++HG A ++ ++EM FK + P+ + VL +
Sbjct: 314 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEM-FKIDNCIVPNDFTISCVLMS 372
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
CA+L+AL D L V N ++DMYSK GDV+ A VFD M +R+
Sbjct: 373 CARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAV 432
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
SW S+++ Y +G S+ A V + MR + PD +T V+ A G+V +F ++
Sbjct: 433 SWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRM 492
Query: 230 K-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
DP V + ++ GR L ++ND + P +L +CR
Sbjct: 493 SKDFGVDPGVEHYACMVDLLGRAGR----LCEATRLINDMSMEPTPVVWISLLSACR 545
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 9/251 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ +AC + +H ++ G F +I +Y C + A +F +L
Sbjct: 16 VFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRG 75
Query: 66 V---FAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXX 121
+ + SI++ +S + + + EM G+ PD +L C L L
Sbjct: 76 ICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGL-CG 134
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V N+++DMY+KCG +E A +VF+ MR +DV +WN+M++ Y N
Sbjct: 135 RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQN 194
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISW 237
G + A+ + MR + E DVVT ++V+ Y + G EA VF Q+ PNV++
Sbjct: 195 GRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTL 254
Query: 238 TTLISGYSSVG 248
+L+S +SVG
Sbjct: 255 MSLLSACASVG 265
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 83/353 (23%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
+Q+H + + G F L+ +YA C + A+ +F ++ +V + +++ +S+
Sbjct: 134 GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQ 193
Query: 79 HGLARQCIETYAEMRFKGVSPD---------GY-----------VF---------PKV-- 107
+G + + +MR + + D GY VF P V
Sbjct: 194 NGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVT 253
Query: 108 ----LKACAQLAALLEXXXXXXXXXXXXXX------XXDLRVCNSVLDMYSKCGDVEGAA 157
L ACA + ALL DL V N+++DMY+KC +E A
Sbjct: 254 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVAR 313
Query: 158 RVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGC-EPDVVT-------- 205
+FDE+ ++RDV +W M+ Y +G + A+++ M ++D C P+ T
Sbjct: 314 AMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSC 373
Query: 206 -----------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
N ++D Y + G V A VF+ + N +S
Sbjct: 374 ARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVS 433
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
WT+L++GY GR + +F EM + +V PD VL +C G + G
Sbjct: 434 WTSLLTGYGMHGRSEDAFRVFDEMRKEALV-PDGITFLVVLYACSHSGMVDRG 485
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 116/280 (41%), Gaps = 75/280 (26%)
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
+PD Y FP V KAC +++ E ++ VCN+V+ MY KC V A
Sbjct: 7 TPDHYTFPFVFKACGEISNF-ELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHAR 65
Query: 158 RVFDEMRER---DVFSWNSMMSCYVCNGLSQRAVEVLESMRV------------------ 196
+VFDE+ R D +WNS++S Y + AV + M V
Sbjct: 66 KVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVC 125
Query: 197 ------------------DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
G DV N ++D Y + G + +A+KVFE+++ +V++W
Sbjct: 126 GYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 185
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGM-------------------------VF------ 267
+++GYS GR +L +F +M + + VF
Sbjct: 186 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 245
Query: 268 ---PDAGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGE 303
P+ L +L +C +GAL GKE H Y +K I+ GE
Sbjct: 246 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGE 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV---ISWTTLISGYSSVGRHGVSL 254
G E +V N V+ Y + V A KVF+++ + ++W +++S YS V++
Sbjct: 40 GFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAV 99
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
+FREM + PD + +L C LG G+++HG+ ++ G + G AL+
Sbjct: 100 SLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVR--SGLVEDVFVGNALV 157
Query: 315 TLYAR 319
+YA+
Sbjct: 158 DMYAK 162
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 145/332 (43%), Gaps = 41/332 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ +CS + LN K+ H Y+ HG T L+ +Y C +L +A LF + Q
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 66 VFAFTSILAFHSRHGL-------------------------------ARQCIETYAEMRF 94
+ ++T+++ ++R G ++ + + EM+
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQI 384
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+ + PD L AC+QL A L+ D+ + +++DMY+KCG++
Sbjct: 385 RTIEPDKVTMVNCLSACSQLGA-LDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIA 443
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A +VF+E+ +R+ +W +++ +G +Q A+ M G PD +T V+ A C
Sbjct: 444 RALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACC 503
Query: 215 RMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
GLV E K F ++ P + ++ ++ +GR G L E+V + + D
Sbjct: 504 HGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMV---DLLGRAG-HLEEAEELVKNMPMAAD 559
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
A L + +CR G + G+ L+I P
Sbjct: 560 AAVLGALFFACRVYGNVQIGERTAFKLLEIDP 591
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 153/387 (39%), Gaps = 77/387 (19%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQL 61
N LL KSL Q KQ+ M+ G F ++L+ A + +L + ++
Sbjct: 58 NPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRI 117
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKAC-AQLAALLE 119
+ NVF++ + + + G Y M G + PD + +P +LK C Q ++ L
Sbjct: 118 KELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL- 176
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V N+ + M CG++ A VF++ R RD+ +WNSM++ V
Sbjct: 177 -GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCV 235
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT---------------------------------- 205
GL+ A+++ + M + P+ +T
Sbjct: 236 KRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP 295
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV------------ 252
N +MD Y + G + A +F+ + ++SWTT++ GY+ G V
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 253 -------------------SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+L +F EM + PD + L +C LGAL G IH
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEM-QIRTIEPDKVTMVNCLSACSQLGALDVGIWIH 414
Query: 294 GYGLKIMPGEIFYRSA-GAALLTLYAR 319
Y I ++ A G AL+ +YA+
Sbjct: 415 HY---IERHKLSIDVALGTALVDMYAK 438
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 37/332 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L AC K L KQ+H Y+L G I Y C ++ LF ++
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMV 304
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++T+++A ++ R ++ + EM G +PD + VL +C L A LE
Sbjct: 305 DKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA-LEKGR 363
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N ++DMY+KC + A +VF+ M D+ S+N+M+ Y
Sbjct: 364 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 183 LSQRAVEVLESMRVDGCEP-----------------------------------DVVTRN 207
A+++ MR+ P D +
Sbjct: 424 KLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGS 483
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + V +A VFE+I+D +++ WT + SGY+ + SL +++ + +
Sbjct: 484 ALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYK-CLQMSRLK 542
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
P+ + V+ + + +L G++ H +K+
Sbjct: 543 PNEFTFAAVITAASNIASLRHGQQFHNQVIKM 574
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 152/352 (43%), Gaps = 39/352 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+++AC+ LN A Q+H ++ G + + T LI Y + A LF L
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
F +T+I+A +S+ G ++ ++ + +M+ V PD YV VL AC L LE
Sbjct: 204 VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLML-KFLEGGK 262
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + N +D Y KC V+ ++FD M +++V SW ++++ + N
Sbjct: 263 QIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNS 322
Query: 183 LSQRAVEVLESMRVDGCEPDV-----------------------------------VTRN 207
+ A+++ M G PD +N
Sbjct: 323 FHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKN 382
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + +++A KVF + +++S+ +I GYS + +L +FREM +
Sbjct: 383 GLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREM-RLSLSS 441
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P +L L L +IH GL I G AG+AL+ +Y++
Sbjct: 442 PTLLIFVSLLGVSASLYHLELSNQIH--GLIIKYGVSLDEFAGSALIDVYSK 491
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 136/289 (47%), Gaps = 9/289 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL ++ L + Q+H ++ +G F + LI +Y+ C + A +F ++
Sbjct: 449 SLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDK 508
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ +T++ + +++ + ++ Y ++ + P+ + F V+ A + +A+L
Sbjct: 509 DIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASL-RHGQQF 567
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D V N+++DMY+K G +E A + F +D WNSM++ Y +G +
Sbjct: 568 HNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEA 627
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTL 240
++A++V E M ++G +P+ VT V+ A GL+ F+ + +P + + +
Sbjct: 628 EKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCM 687
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+ S +GR G L +E + + A +L +CR G + G
Sbjct: 688 V---SLLGRAG-KLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELG 732
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 54/97 (55%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
D+ NT++ AY ++ LV+ A+K+F+ + N+++W++++S Y+ +L +F + +
Sbjct: 73 DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
P+ L+ V+ +C G L +IHG +K
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVK 169
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 39/298 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
H+ + C +S+ AK LH +++ G F +I +Y+ C + A ++F ++
Sbjct: 5 HIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEM 64
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEX 120
P N+ ++T++++ + + + + Y EM K P+ +++ VLKAC L +E
Sbjct: 65 PHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACG-LVRNVEL 123
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ + N++LDMY KCG + A RVF E+ ++ SWN+++ Y
Sbjct: 124 GKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAK 183
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
GL A+++ + M EPD+V+ N+++ GLV AS + + ++
Sbjct: 184 QGLIDDAMKLFDKMP----EPDIVSWNSII-----AGLVDNASS--------RALRFVSM 226
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ HG L + D FP VL +C C L G+EIH Y +K
Sbjct: 227 M--------HGKGLKM------DEFTFP------SVLKACGCSDELMLGREIHCYIIK 264
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 166/389 (42%), Gaps = 80/389 (20%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+++L+AC +++ K +H+++ L+ +Y C LR A +F ++P
Sbjct: 109 SAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPC 168
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEM------------------------RF----- 94
N ++ +++ +++ GL ++ + +M RF
Sbjct: 169 KNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMH 228
Query: 95 -KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
KG+ D + FP VLKAC L+ ++++DMYS C +
Sbjct: 229 GKGLKMDEFTFPSVLKACGCSDELM-LGREIHCYIIKSGFESSCYCISALIDMYSSCKLL 287
Query: 154 EGAARVFDEMRERDVFS-----WNSMMSCYVCNGLSQRAVEVLESM-----RVD------ 197
A ++FD+ S WNSM+S +V NG A+ ++ M R D
Sbjct: 288 SEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSI 347
Query: 198 ------------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
G E D V + ++D Y + G ++ A ++FE++ D +
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
V++W++LI+G + G ++ +F +M++ G+ D +S VL +C L + GK++H
Sbjct: 408 VVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQI-DHFVISIVLKACSSLASHQHGKQVH 466
Query: 294 GYGLKIMPGEIFYRSAG---AALLTLYAR 319
LK G Y S G AL+ +YA+
Sbjct: 467 SLCLK--KG---YESEGVVTTALIDMYAK 490
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ C +L+ A Q+H +++ G + LI IYA + +A LF +LP +
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V A++S++ +R G + + +M G+ D +V VLKAC+ LA+ +
Sbjct: 408 VVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASH-QHGKQVH 466
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V +++DMY+KCGD+E A +F + E D SW S++ NG ++
Sbjct: 467 SLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAE 526
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTL 240
A+ +L M G +P+ +T V+ A GLV EA VF I+ P + +
Sbjct: 527 EAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCM 586
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ GR ++ + EM PD S +L +C
Sbjct: 587 VDILGQAGRFEEAVKLISEMPFK----PDKTIWSSLLGAC 622
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 140/328 (42%), Gaps = 42/328 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC S L +++H Y++ G + + LI +Y+ C L A +F Q +
Sbjct: 241 SVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRN 300
Query: 65 NVFA-----FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ + + S+L+ H +G + + + M GV D Y F VLK C L
Sbjct: 301 SSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDN-LS 359
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D V + ++D+Y+K G + A R+F+ + ++DV +W+S+++
Sbjct: 360 LASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCA 419
Query: 180 CNGLSQRAVEVLESM-----RVD------------------------------GCEPDVV 204
G + A + M ++D G E + V
Sbjct: 420 RFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGV 479
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++D Y + G + +A +F + + + +SWT++I G + GR ++ + +M+ G
Sbjct: 480 VTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESG 539
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEI 292
P+ + GVL +CR G + ++
Sbjct: 540 -TKPNKITILGVLTACRHSGLVEEAWDV 566
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS+ S KQ+H L G + TT LI +YA C D+ A SLF L + +
Sbjct: 449 VLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEID 508
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++TSI+ +++G A + I +M G P+ VL AC + E
Sbjct: 509 TMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFN 568
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLS 184
N ++D+ + G E A ++ EM + D W+S++ C
Sbjct: 569 SIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLG--ACGTYK 626
Query: 185 QRAVEVLESMRVDGCEP-DVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
R + + + + P DV + + Y +G+ SKV E +K
Sbjct: 627 NRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVK 673
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 10/280 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L++C K QAKQLH ++ G + LI +Y++ +L A +F ++ +V
Sbjct: 103 LKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDV 162
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++TS++A H L + I+ + M GV + VL+ CA AL
Sbjct: 163 VSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGAL-SVGRKVHG 221
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
VC +++ MYSKCG +E A VFD++ +RDVF W +M+ C+G+ +
Sbjct: 222 IVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKE 281
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLI 241
A+E+ M +PD T V+ AY GLV E F ++ PN+ + ++
Sbjct: 282 AIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMV 341
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ G L + +N + PDA ++ +C+
Sbjct: 342 DLLAK----GGCLEEAEDFINAMPMKPDAVIWRTLIWACK 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 44/316 (13%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
+++QA QLH + +++ F + DL A L P N + + +I+
Sbjct: 5 NMSQALQLH-AQFIKSQNQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTIIR 63
Query: 75 FHSRHGLARQCIETYAEMRF------KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
+S + + F PD + + LK+C +L L +
Sbjct: 64 AYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLK-LTQQAKQLHGFI 122
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
DL + N+++ MYS+ G++ A +VFD M RDV SW SM++ +V + L+ A+
Sbjct: 123 NKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAI 182
Query: 189 EVLESMR---VDGCEPDVVTR--------------------------------NTVMDAY 213
++ + M VD E V++ ++ Y
Sbjct: 183 QLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMY 242
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
+ G + A +VF+ + D +V WT +I G + G ++ +F EM V PD +
Sbjct: 243 SKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEM-ETCNVKPDERTI 301
Query: 274 SGVLVSCRCLGALASG 289
VL + R G + G
Sbjct: 302 MVVLSAYRNAGLVREG 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+ C+ S +L+ +++H + G K T LI +Y+ C L SA +F +
Sbjct: 202 SVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDR 261
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+VF +T+++ + HG+ ++ IE + EM V PD VL A + E
Sbjct: 262 DVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFF 321
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGL 183
+++ ++D+ +K G +E A + M + D W +++ +
Sbjct: 322 NDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHAD 381
Query: 184 SQRAVEVLESMRVDG 198
++RA +++ + + G
Sbjct: 382 TERAERLMKHLELQG 396
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 152/331 (45%), Gaps = 42/331 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIY-ADCDDLRSAHSLFRQLPQP 64
LL+AC+ + + Q+H ++ G R+ F + L+ +Y DDLR A +F L +
Sbjct: 114 LLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLER 173
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V A+ +++ +++G R ++EM +G+ PD F +LK C+ L +++
Sbjct: 174 DVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQIHGI 233
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++++D+Y+KC DV ++FD M ++D F W+SM+S Y N
Sbjct: 234 VYKFGAEV----DVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNR 289
Query: 184 SQRAVEVLESM---RV--------------------------------DGCEPDVVTRNT 208
+ AV + M RV +G + D +
Sbjct: 290 GEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASV 349
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH-GVSLGIFREMVNDGMVF 267
+++ Y G + + K+F +I D ++++W ++I + G+ G + +F+E+ +
Sbjct: 350 LLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQ 409
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
L VL SC L +G++IH +K
Sbjct: 410 IQGATLVAVLKSCEKDSDLPAGRQIHSLIVK 440
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 125/252 (49%), Gaps = 6/252 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L++C L +Q+H ++ R L+ +Y++C + A F +
Sbjct: 415 LVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIV 474
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +++SI+ ++ + + +E EM +G++ Y P + AC+QL + E
Sbjct: 475 RKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQ 534
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + +S++DMY+KCG++E + +VFDE + + ++N+++S Y +G
Sbjct: 535 LHVFAIKSGYSC-DVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHG 593
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
+Q+A+EVL + +G P+ VT +M A G V E S +F + D P +
Sbjct: 594 KAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHY 653
Query: 238 TTLISGYSSVGR 249
+ L+ Y GR
Sbjct: 654 SCLVDAYGRAGR 665
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 144/337 (42%), Gaps = 38/337 (11%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L Q Q+H +++ + L+ Y+ + AH LF ++P NV +T++++
Sbjct: 23 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 82
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
H ++G + E + MR P+ F +L+AC L
Sbjct: 83 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTN-RELWSVGLQIHGLLVRCGLER 141
Query: 136 DLRVCNSVLDMYSKCG-DVEGAARVFDEMRERDVFSWNSMMSCYVCNG---LSQRAVEVL 191
+ +S++ MY K G D+ A RVF + ERDV +WN M+S + NG + QR +
Sbjct: 142 EKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEM 201
Query: 192 ------------------------ESMRVD------GCEPDVVTRNTVMDAYCRMGLVSE 221
E M++ G E DVV + ++D Y + VS
Sbjct: 202 WEEQGLKPDRITFASLLKCCSVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSS 261
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
K+F+ ++ + W+++ISGY+ R ++ F++M V D LS L +C
Sbjct: 262 CRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQ-RVKLDQHVLSSTLKACV 320
Query: 282 CLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
+ L +G ++H GL I G + LL LYA
Sbjct: 321 EIEDLNTGVQVH--GLMIKNGHQNDCFVASVLLNLYA 355
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 39/315 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S L+AC + LN Q+H M+ +G F + L+ +YA +L LF ++
Sbjct: 312 LSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID 371
Query: 63 QPNVFAFTSILAFHSRHGLA-RQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEX 120
++ A+ S++ +R G +C++ + E+R + G VLK+C + + L
Sbjct: 372 DKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAG 431
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
L V N+++ MYS+C ++ A + F ++ +D SW+S++
Sbjct: 432 RQIHSLIVKSSLCRHTL-VGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQ 490
Query: 181 NGLSQRAVEVLESMRVDG--------------CEP---------------------DVVT 205
N + +A+E+ + M +G C DV
Sbjct: 491 NRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYI 550
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++++D Y + G + E+ KVF++ PN +++ +ISGY+ G+ ++ + ++ +G
Sbjct: 551 GSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNG- 609
Query: 266 VFPDAGALSGVLVSC 280
V P+ ++ +C
Sbjct: 610 VAPNHVTFLALMSAC 624
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 151/352 (42%), Gaps = 44/352 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ CS LN+ Q+H + G+ + ++ +YA C D+ S +F + +
Sbjct: 216 SLLKCCSV---LNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKK 272
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ F ++S+++ ++ + + + + +M + V D +V LKAC ++ L
Sbjct: 273 DNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIED-LNTGVQV 331
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM--------S 176
D V + +L++Y+ G++ ++F + ++D+ +WNSM+
Sbjct: 332 HGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQG 391
Query: 177 CYVCNGLSQR-------------AVEVLESMRVDGCEP----------------DVVTRN 207
C C L Q V VL+S D P + N
Sbjct: 392 CGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGN 451
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++ Y + +A K F I + SW+++I +L + +EM+++G+ F
Sbjct: 452 ALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINF 511
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ +L + +C L ++ GK++H + +K Y G++++ +YA+
Sbjct: 512 T-SYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVY--IGSSIIDMYAK 560
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 48/309 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHY---MLLHGSHRKP----FFTTKLIQIYADCDDLRSAH 55
L SLL AC++ +L K+ H Y +L G H LI +YA C L A
Sbjct: 89 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDLAVINALIDMYAKCKSLEVAR 148
Query: 56 SLFRQL-PQP-NVFAFTSILAFHSRHGLARQCIETYAEM-RFKG-VSPDGYVFPKVLKAC 111
++F ++ P+ +V +T ++ ++++G A ++ ++EM +F + P+ + VL +C
Sbjct: 149 AMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMSC 208
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A+L+AL+ D L V N ++DMYSK GDV+ A VFD M +R+ S
Sbjct: 209 ARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAIS 268
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
W S+++ Y +G S+ A V + MR E +
Sbjct: 269 WTSLLTGYGMHGCSEDAFRVFDEMRK------------------------------EALS 298
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVN-DGMVFPDAGALSGVLVSCRCLGALASG 289
N SW + G ++ H +L +F EM D + P+ +S VL+SC L AL G
Sbjct: 299 FGNGGSWNRFVXGDAN---H--ALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFG 353
Query: 290 KEIHGYGLK 298
K+IH + L+
Sbjct: 354 KQIHAHVLR 362
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIYADCDDLRSAHSLFRQ 60
++ +L +C+ +L K +H Y+L F LI +Y+ D+ +A +F
Sbjct: 201 ISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDS 260
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS---------------------- 98
+ + N ++TS+L + HG + + EMR + +S
Sbjct: 261 MSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXGDANHALQLF 320
Query: 99 -----------PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDM 146
P+ + VL +CA+L+AL D L V N ++DM
Sbjct: 321 SEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHSNSDVLFVANCLIDM 380
Query: 147 YSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR 206
YSK GDV+ A VFD M +R+ SW S+++ Y +G S+ A V + MR + D +T
Sbjct: 381 YSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITF 440
Query: 207 NTVMDA----YCRMGLVSEASKVFEQIK-------DPNVISWTTLISG 243
V+ A C + L+ A ++ E ++ +P + W L+S
Sbjct: 441 LVVLYACKHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 488
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+E A++V++ MR +DV +WN+M++ Y NG + A+ + MR + E DVVT ++V+
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISG 60
Query: 213 YCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVG 248
Y + G EA VF ++ PNV+ +L+S +SVG
Sbjct: 61 YAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVG 100
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQIKDPNVISWTTL 240
+ A +V E MR DVVT N ++ Y + G +A +F E+I + +V++W+++
Sbjct: 2 EDASKVYERMRF----KDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSV 57
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK-I 299
ISGY+ G ++ +FR+M P+ L +L +C +GAL GKE H Y +K I
Sbjct: 58 ISGYAQRGFGCEAMDVFRKMCG-CRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFI 116
Query: 300 MPGE 303
+ GE
Sbjct: 117 LKGE 120
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 150/307 (48%), Gaps = 24/307 (7%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
+N+A++L + + + T ++ Y + + A LF ++P NV ++ +++
Sbjct: 48 INEARKLFDRL---DAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDG 104
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
++R+G ++ ++ + M + V + V+ A A + +
Sbjct: 105 YARNGRTQEAMDLFGRMPERNVVS----WNTVMTALAHCGRIDDAERLFNEMRER----- 155
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ +++ SK G V+ A VFD M R+V SWN+M++ Y NG A+++ E M
Sbjct: 156 DVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERM- 214
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
E D+ + NT++ + + G ++ A K+F + NVI+WT +++GY G +L
Sbjct: 215 ---PERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALK 271
Query: 256 IFREM-VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA--GAA 312
+F +M NDG+ P G VL +C L L G++IH +++ +F S +A
Sbjct: 272 LFNKMQANDGLK-PTTGTFVTVLGACSDLAGLPEGQQIH----QMISKTVFQESTYVVSA 326
Query: 313 LLTLYAR 319
L+ +Y++
Sbjct: 327 LINMYSK 333
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 24/268 (8%)
Query: 35 PFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
P + T ++ + DL A LF +P+ NV +T+++ + +HGL+ + ++ + +M+
Sbjct: 220 PSWNT-MVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQA 278
Query: 95 K-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
G+ P F VL AC+ LA L E V +++++MYSKCGD
Sbjct: 279 NDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTY-VVSALINMYSKCGDF 337
Query: 154 EGAARVFDE--MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
A ++FD+ D+ +WN M++ Y +G A+ + M+ G + + VT ++
Sbjct: 338 HVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLT 397
Query: 212 AYCRMGLVSEASKVFEQIKDPNVIS-----WTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
A GL E K F+++ + +T LI GR +L I +
Sbjct: 398 ACSHAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGL------ 451
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHG 294
G VS GAL +G +HG
Sbjct: 452 --------GKEVSLSVWGALLAGCSVHG 471
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
++ CN + + G + A +VFDEM ERD W +M+S Y+ GL A ++ + R+
Sbjct: 1 MKRCNYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFD--RL 58
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
D E V+ ++ Y ++ + EA ++F ++ NV+SW T+I GY+ GR ++ +
Sbjct: 59 D-AEKSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDL 117
Query: 257 FREM 260
F M
Sbjct: 118 FGRM 121
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 31/258 (12%)
Query: 46 ADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFP 105
A C + A LF ++ + +V ++T+++A S++G + + M + V +
Sbjct: 137 AHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVS----WN 192
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
++ AQ E D+ N+++ + + GD+ A ++F M +
Sbjct: 193 AMIAGYAQNGRFDEALKLFERMPER-----DMPSWNTMVTGFIQNGDLNRAEKLFHAMPK 247
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASK 224
++V +W +MM+ YV +GLS+ A+++ M+ DG +P T TV+ A + + E +
Sbjct: 248 KNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQ 307
Query: 225 VFEQI------KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
+ + I + V+S LI+ YS G V+ ++M +DG LSG +
Sbjct: 308 IHQMISKTVFQESTYVVS--ALINMYSKCGDFHVA----KKMFDDG--------LSGHMD 353
Query: 279 SCRCLGALASGKEIHGYG 296
G +A+ HGYG
Sbjct: 354 LIAWNGMIAAYAH-HGYG 370
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 151/326 (46%), Gaps = 39/326 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L++L+ +S S++ + +H +++ +R F +L+ Y + A+ LF ++P
Sbjct: 48 LSTLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMP 107
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
+ + ++ S+++ ++ G +C+ + +M+ + + + F V+ AC A E
Sbjct: 108 KKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE-G 166
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM--RERDVFSWNSMMSCYV 179
+++V N++++MY K G VE A R+F EM E+ + SWNS+++
Sbjct: 167 YYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCA 226
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTR--------------------------------- 206
NG+ A + MRV+G PD T
Sbjct: 227 QNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLT 286
Query: 207 --NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
T+++ Y ++G ++ + KVFE+I P+ ++WT +++GY+ G ++ F +V +
Sbjct: 287 IVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREE 346
Query: 265 MVFPDAGALSGVLVSCRCLGALASGK 290
+ PD + +L +C G + GK
Sbjct: 347 GMEPDHVTFTHLLSACSHSGLVKEGK 372
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 9/232 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLLQAC + LH + G T L+ +Y+ L ++ +F ++ +P
Sbjct: 255 SLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKP 314
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ A+T++LA ++ HG ++ IE + + R +G+ PD F +L AC+ + E
Sbjct: 315 DKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYF 374
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM-SCYVCN 181
L + ++D+ +CG ++ A + M E + W +++ +C V
Sbjct: 375 FRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHR 434
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM--DAYCRMGLVSEASKVFEQIKD 231
+ + +D +P RN +M + Y GL ++ASKV +K+
Sbjct: 435 NIDLGKEAAKNLIALDPSDP----RNYIMLSNMYSAAGLWNDASKVRTLMKN 482
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ ++ Y +MG +A +F+++ + +SW +L+SG + +G+ G L +F +M +D +
Sbjct: 84 DQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSEL 143
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ V+ +C A G +H +K+ G ++ AL+ +Y +
Sbjct: 144 KLNEFTFLSVISACVSEKACDEGYYVHCCAMKL--GLVYEVKVVNALVNMYGK 194
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 131/320 (40%), Gaps = 45/320 (14%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+ +L +K+ Q+H + L HG H + + + + A ++F
Sbjct: 10 SKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHH 69
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXX 122
PN+ F SI+ HS Q + M+ + PD + FP +LKA + L +
Sbjct: 70 PNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRD-YDLGQ 128
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V +L++YS CG +E A +VFDEM R+V WN M
Sbjct: 129 CLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIM-------- 180
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
++ +C+MG + K+F+++ +V+SW +IS
Sbjct: 181 ---------------------------INGFCKMGDLEIGLKLFKRMGQRSVVSWNLMIS 213
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
+ + G + GIFREM+ G PD L VL C LG + +G+ IH Y G
Sbjct: 214 CLAQRKKDGEAFGIFREMLEQGFE-PDDATLVTVLPVCARLGDVDAGEWIHSYA----DG 268
Query: 303 EIFYR---SAGAALLTLYAR 319
+ R S G +L+ Y +
Sbjct: 269 KGLLRKVISVGNSLVDFYCK 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 13/284 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+ S + A ++ ML HR+ +I + DL LF+++ Q +
Sbjct: 149 LLEVYSNCGKMEDANKVFDEML----HREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRS 204
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ +++ ++ + + EM +G PD VL CA+L +
Sbjct: 205 VVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHS 264
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V NS++D Y KCG++E A +VF+EM +++V SWN+M+S NG +
Sbjct: 265 YADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGE 324
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
VE+ E M G P T V+ G V + ++F+ + P + + +
Sbjct: 325 LGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCV 384
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+ G + + R M + P+A +L +CR G
Sbjct: 385 VDLLGRCGHVKEAYDLIRNMP----LMPNAALWGALLSACRTHG 424
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
R F + ++ Y D+ A ++FR++P N+ + S++A + ++G + +E + E
Sbjct: 209 ERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGE 268
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M G PD + VL ACAQL L + + V + ++DMY+KCG
Sbjct: 269 MGVDGFEPDEFTVVSVLSACAQLGDL-DAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCG 327
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
D+ A VF+ ER+VF WN+M++ + NG +E L+ M+ D VT TV+
Sbjct: 328 DLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLS 387
Query: 212 AYCRMGLVSEASKVFEQIKD 231
A GL+SEA +V ++++
Sbjct: 388 ACAHGGLMSEALEVISKMEE 407
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 140/364 (38%), Gaps = 78/364 (21%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+AC + L K LH + GS F T ++ YA C + A +F +P+ N
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERN 116
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + +++ + R+G A+ + + EM K + +++ A+ L
Sbjct: 117 VVTWNAMIGGYLRNGDAKSALLAFEEMPGK----TRVSWSQMIGGFARNGDTL---TARK 169
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW-------------- 171
D+ + ++D Y+K G++E A VF+ M ER+ F W
Sbjct: 170 FFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVM 229
Query: 172 -----------------NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM---- 210
NSM++ YV NG ++A+E M VDG EPD T +V+
Sbjct: 230 EAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACA 289
Query: 211 -------------------------------DAYCRMGLVSEASKVFEQIKDPNVISWTT 239
D Y + G + A VFE + NV W
Sbjct: 290 QLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNA 349
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI----HGY 295
+I+G++ G+ L M + + DA VL +C G ++ E+ Y
Sbjct: 350 MIAGFAVNGQCNEVLEYLDRM-QESNIRLDAVTFITVLSACAHGGLMSEALEVISKMEEY 408
Query: 296 GLKI 299
G+++
Sbjct: 409 GIEM 412
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 62/254 (24%)
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
D V P++LKAC L D+ + +++ Y+KCG V A +V
Sbjct: 50 DPTVIPQLLKACDS-HPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKV 108
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM----RVDGCE--------------- 200
FD M ER+V +WN+M+ Y+ NG ++ A+ E M RV +
Sbjct: 109 FDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTAR 168
Query: 201 ----------PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH 250
DVV ++D Y + G + +A +VFE + + N W++++ GY G
Sbjct: 169 KFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDV 228
Query: 251 GVSLGIFR-------------------------------EMVNDGMVFPDAGALSGVLVS 279
+ IFR EM DG PD + VL +
Sbjct: 229 MEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFE-PDEFTVVSVLSA 287
Query: 280 CRCLGALASGKEIH 293
C LG L +GK++H
Sbjct: 288 CAQLGDLDAGKQMH 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 26/330 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC+ L+ KQ+HH + G F + LI +YA C DL +A +F +
Sbjct: 283 SVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNER 342
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NVF + +++A + +G + +E M+ + D F VL ACA L+
Sbjct: 343 NVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSACAH-GGLMSEALEV 401
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE--MRERDVFSWNSMMSCYVCNG 182
+R ++D+ + G ++ A + M+ + + +C++ +
Sbjct: 402 ISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSD 461
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ + A +V++ + D V + N ++ + SE + E I+ V + I
Sbjct: 462 M-KMAEQVMKMIGADSAAC-VNSHNVLLS---NIYAASEKWEKAEMIRSSMVDGGSEKIP 516
Query: 243 GYSSV--GRHGVSLGIFREM--------VNDGM----VFPDAGALSGVLVSCRCLGALAS 288
GYSS+ V L I +E+ ++G+ FP A A SG VS + A S
Sbjct: 517 GYSSIILSNSAVDLSISKEISRQMNGLSADEGLYADNTFP-AVAWSGRAVSV-LVPANWS 574
Query: 289 GKEIHGYGL--KIMPGEIFYRSAGAALLTL 316
K G L +MPG + AA+L +
Sbjct: 575 AKTTGGLKLCWGLMPGFVDGSRVNAAVLVV 604
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 15/251 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAH----SL 57
L +L++ CS K AKQ+H ++ + +H +P F +++ D + ++ S+
Sbjct: 6 LTTLMKKCSTVK---HAKQIHAQIITNNLTHLEPIFIHRIL--LCDITNYKTISNYILSI 60
Query: 58 FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
L P+ F++ ++ F S+ G + + Y +MR G+ P + +LK+CA++
Sbjct: 61 LHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDD 120
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L + V ++LD+Y K GDV A +VFDEM +++V SWNS++S
Sbjct: 121 LCGLLIHGHVHKFGFDAC-VYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSG 179
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
Y+ G + + + DV++ N ++ Y + G + A +F+Q+ + N SW
Sbjct: 180 YIKGGNLDEGQRFFDEIPL----KDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASW 235
Query: 238 TTLISGYSSVG 248
T+I+GY G
Sbjct: 236 NTMITGYVDCG 246
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 15/293 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ S+ +A++L M R +I Y+ D+ SA LF Q+
Sbjct: 236 NTMITGYVDCGSIVEARELFDAM----PRRNSVSLITMIAGYSKSGDVHSARELFDQMDD 291
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLEXX 121
++ ++ +++A +++ ++ ++ + M S PD V+ AC+QL L E
Sbjct: 292 KDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNL-EHW 350
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D + +++D+Y+KCG ++ A +F +R+RDV ++++M+ N
Sbjct: 351 RWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGIN 410
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISW 237
G + AVE+ E M + P++VT ++ AY GL E + F +KD P+V +
Sbjct: 411 GRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHY 470
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
++ +GR G ++ ++ M P+ G +L++CR L G+
Sbjct: 471 GIMV---DLLGRAGWLDEAYKLIMKMPMQ-PNVGVWGALLLACRLHDNLKLGE 519
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 61/305 (20%)
Query: 26 MLLHGSHRK------PFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
+L+HG K + T L+ +Y D+ +A +F ++P NV ++ S+L+ + +
Sbjct: 124 LLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKG 183
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G + + E+ K D+
Sbjct: 184 GNLDEGQRFFDEIPLK----------------------------------------DVIS 203
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N ++ Y+K G ++ A +F +M ER+ SWN+M++ YV G A E+ ++M
Sbjct: 204 WNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMP---- 259
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+ V+ T++ Y + G V A ++F+Q+ D +++S+ +I+ Y+ + +L +F
Sbjct: 260 RRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNV 319
Query: 260 MVN-DGMVFPDAGALSGVLVSCRCLGALASGK----EIHGYGLKIMPGEIFYRSAGAALL 314
M+ D + PD L+ V+ +C LG L + +I+ +G+ + AL+
Sbjct: 320 MLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGI------VLDDHLATALI 373
Query: 315 TLYAR 319
LYA+
Sbjct: 374 DLYAK 378
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 14/284 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-- 63
LL C + A+++ M+ G T LI+++ + D+ A + + +
Sbjct: 129 LLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESG 188
Query: 64 --PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
PN++ + +++ + + G ++ E Y++M G+ PD F ++ ++ L E
Sbjct: 189 VEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDL-EAA 247
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSC 177
+L V N ++D Y K GD+ A R+ DEM DVF+ + ++
Sbjct: 248 RNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKG 307
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPN 233
+G + A ++E M G + VT N V+D YC+MG + +A +V Q+ +PN
Sbjct: 308 LCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPN 367
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
VI+++TLI G+ G ++G++ EMV G+V PD + ++
Sbjct: 368 VITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLV-PDVVTYTALI 410
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
+L+ + ++ + +++ ML +G H L+ + DL +A + F + +
Sbjct: 198 TLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKF 257
Query: 64 ---PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
PN++ + ++ + + G + + EM GV D + ++K + E
Sbjct: 258 GVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCD-SGRFEE 316
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMS 176
+ N+V+D Y K GD+E A V +M ER +V ++++++
Sbjct: 317 AKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLID 376
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV-FEQIKD---- 231
+ G + A+ + M + G PDVVT ++D +C++ E SKV FE K+
Sbjct: 377 GFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKV----ENSKVAFELHKEMMEA 432
Query: 232 ---PNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
PNV++ T+LI G G+ ++ +F E G
Sbjct: 433 GLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVG 468
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLE 192
LR CN++L K + V++ + R + ++ +++C G A +V +
Sbjct: 88 LRECNALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFD 147
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVG 248
M G P+VV T++ +C G + EA + + ++ +PN+ ++ TLI GY G
Sbjct: 148 EMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTG 207
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-LGALASGKEIHGY 295
I+ +M+ +G+ PD + +LV C +G L + + Y
Sbjct: 208 NVKRVFEIYSDMLRNGL-HPDVVTFA-ILVDVLCKVGDLEAARNCFVY 253
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 14/305 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++LL A S + + + +L H + ++ + +I +Y +C + A +F +P
Sbjct: 334 STLLDAYSKCQHPHDSCKLFHELKVYDA----ILLNTMITVYCNCGRVEDAKEVFNSMPN 389
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ SIL +++ + ++T++ M V D + F V+ ACA + + LE
Sbjct: 390 KTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACA-IKSSLELGEQ 448
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D +C S++D Y KCG VE +VFD M + D SWN+M+ Y NG
Sbjct: 449 LFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGY 508
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
A+ + M G P +T ++ A GLV E +F +K +P + ++
Sbjct: 509 GIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYS 568
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
++ ++ VG G ++ + EM DA VL C G GK ++
Sbjct: 569 CMVDLFARVGCFGEAMYLIEEMPFQA----DANMWLSVLRGCVSHGNKTIGKMAAEKIIQ 624
Query: 299 IMPGE 303
+ PG
Sbjct: 625 LDPGN 629
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L++A N++ +L H M H+ + ++ + DL+ A +LF +P
Sbjct: 65 NTLIEAHINLGHRNKSLELFHAM----PHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPM 120
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRF---KGVSPDGYVFPKVLKACAQLAAL-LE 119
N + S++ +SRHG R + + EM + V D +V V ACA L AL
Sbjct: 121 KNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCG 180
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D +C+S+++ Y KCGD++ AARV ++E D FS ++++S Y
Sbjct: 181 KQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYA 240
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
G +S+A KVF+ DP + W +
Sbjct: 241 -----------------------------------NAGRMSDARKVFDNKVDPCSVLWNS 265
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ISGY S G +L +F +M +G V+ D A++ +L L + K++H + KI
Sbjct: 266 IISGYVSNGEEMEALALFNKMRRNG-VWGDFSAVANILSISSSLLNVELVKQMHDHAFKI 324
Query: 300 MPGEIFYRSAGAALLTLYAR 319
G + LL Y++
Sbjct: 325 --GATHDIVVASTLLDAYSK 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N +L +YS+ G + A+++FDEM + + FSWN+++ ++ G +++E+ +M
Sbjct: 34 NRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELFHAMP----H 89
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+ N ++ + G + +A +F + N + W ++I GYS G SL +F+EM
Sbjct: 90 KTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEM 149
Query: 261 VNDGM--VFPDAGALSGVLVSCRCLGALASGKEIHG 294
D + V DA LS V +C L AL GK++H
Sbjct: 150 NLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHA 185
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 103/264 (39%), Gaps = 37/264 (14%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
F + L+ YA+ + A +F P + SI++ + +G + + + +MR
Sbjct: 230 FSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRN 289
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
GV D +L + L + E D+ V +++LD YSKC
Sbjct: 290 GVWGDFSAVANILSISSSLLNV-ELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHD 348
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCR 215
+ ++F E++ D N+M++ Y C
Sbjct: 349 SCKLFHELKVYDAILLNTMITVY-----------------------------------CN 373
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G V +A +VF + + +ISW +++ G + +L F M+N V D + +
Sbjct: 374 CGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTF-SMMNKLDVKMDKFSFAS 432
Query: 276 VLVSCRCLGALASGKEIHGYGLKI 299
V+ +C +L G+++ G + +
Sbjct: 433 VISACAIKSSLELGEQLFGKAITL 456
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
VC + + L ++ V+T N ++ Y R G + +ASK+F+++ PN SW
Sbjct: 6 VCRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWN 65
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
TLI + ++G SL +F M
Sbjct: 66 TLIEAHINLGHRNKSLELFHAM 87
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 16/273 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+ L+ +A +L A +F +P+ +V ++T +L+ +S+ + ++ + EMR GV
Sbjct: 179 SGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVW 238
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD V+ ACA+L E + +CNS++DMY KCG +E A +
Sbjct: 239 PDEVTVLSVISACAELGDA-EMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQ 297
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VFD + + + +WN+MM +G ++ A + E M G PD VT ++ AY G
Sbjct: 298 VFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGF 357
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVN--DGMVFPDAG 271
V E ++FE ++ +P + + ++ GR +E N M P
Sbjct: 358 VDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGR-------LQEAYNLLTSMPIPSND 410
Query: 272 ALSGVLV-SCRCLGALASGKEIHGYGLKIMPGE 303
+ G L+ +CR G + G+ + L++ P E
Sbjct: 411 VIWGALLGACRIHGDVGMGERVIKKLLELKPDE 443
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLPQPNVFAFTSI 72
S+ K +H + H+ KL + A DL AH++F Q+PQP F + ++
Sbjct: 19 SMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTL 78
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ HS + MR ++PD + F +LK+ + L+
Sbjct: 79 IRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLVH------------- 125
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ GA F R V N+++ Y G++ A +V E
Sbjct: 126 -------------------DIHGAVFKFGFCRHLHV--QNALIHLYAVGGVTISARKVFE 164
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
G + D+V+ + ++ A+ + G + A KVF+ + + +V+SWT ++S YS R
Sbjct: 165 DAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHE 224
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+L +F+EM G V+PD + V+ +C LG G+ +H +
Sbjct: 225 TLDLFQEMRLAG-VWPDEVTVLSVISACAELGDAEMGRMVHKF 266
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 16/273 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+ L+ +A +L A +F +P+ +V ++T +L+ +S+ + ++ + EMR GV
Sbjct: 179 SGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVW 238
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD V+ ACA+L E + +CNS++DMY KCG +E A +
Sbjct: 239 PDEVTVLSVISACAELGDA-EMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQ 297
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VFD + + + +WN+MM +G ++ A + E M G PD VT ++ AY G
Sbjct: 298 VFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGF 357
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVN--DGMVFPDAG 271
V E ++FE ++ +P + + ++ GR +E N M P
Sbjct: 358 VDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGR-------LQEAYNLLTSMPIPSND 410
Query: 272 ALSGVLV-SCRCLGALASGKEIHGYGLKIMPGE 303
+ G L+ +CR G + G+ + L++ P E
Sbjct: 411 VIWGALLGACRIHGDVGMGERVIKKLLELKPDE 443
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLPQPNVFAFTSI 72
S+ K +H + H+ KL + A DL AH++F Q+PQP F + ++
Sbjct: 19 SMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTL 78
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ HS + MR ++PD + F +LK+ + L+
Sbjct: 79 IRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLVH------------- 125
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ GA F R V N+++ Y G++ A +V E
Sbjct: 126 -------------------DIHGAVFKFGFCRHLHV--QNALIHLYAVGGVTISARKVFE 164
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
G + D+V+ + ++ A+ + G + A KVF+ + + +V+SWT ++S YS R
Sbjct: 165 DAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHE 224
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+L +F+EM G V+PD + V+ +C LG G+ +H +
Sbjct: 225 TLDLFQEMRLAG-VWPDEVTVLSVISACAELGDAEMGRMVHKF 266
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+LQ C K+ + +++H +M++ G + KL+ +YA L +A LF L + +
Sbjct: 60 MLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKD 119
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
FA+ +++A + + GL +ET+ EMR + PD Y F V +ACA L ALLE
Sbjct: 120 SFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATL-ALLEPGRQAH 178
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V ++++DMY KC + +FD+ R+ +W +++S Y G
Sbjct: 179 GVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGY---GKHG 235
Query: 186 RAVEVLES---MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ-IKDPNVI 235
+ VEVL+S M + P+ VT V+ A +GL+ EA K F+ I+D ++
Sbjct: 236 QVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMV 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
R + M + G P+ + ++ Y + G + A +F + + + +W +I+GY
Sbjct: 72 RGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYV 131
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
G V L F EM + PD + V +C L L G++ HG LK G+
Sbjct: 132 QKGLEEVGLETFYEM-RQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGD 188
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 141/284 (49%), Gaps = 21/284 (7%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T ++ Y + + A LF ++P NV ++ +++ ++R+G ++ ++ + M + V
Sbjct: 112 TAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVV 171
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
+ V+ A A + + D+ +++ SK G V+ A
Sbjct: 172 S----WNTVMTALAHCGRIDDAERLFNEMRER-----DVVSWTTMVAGLSKNGRVDAARE 222
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VFD+M R+V SWN+M++ Y NG A+++ E M E D+ + NT++ + + G
Sbjct: 223 VFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERM----PERDMPSWNTMVTGFIQNGD 278
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGMVFPDAGALSGVL 277
++ A ++F + NVI+WT +++GY G +L +F +M NDG+ P G VL
Sbjct: 279 LNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLK-PTTGTFVTVL 337
Query: 278 VSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG--AALLTLYAR 319
+C L L G++IH +++ +F S +AL+ +Y++
Sbjct: 338 GACSDLAGLPEGQQIH----QMISKTVFQESTYVVSALINMYSK 377
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 23/253 (9%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVL 108
DL A LF +PQ NV +T+++ + +HGL+ + ++ + +M+ G+ P F VL
Sbjct: 278 DLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVL 337
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE--MRER 166
AC+ LA L E V +++++MYSKCGD A ++FD+
Sbjct: 338 GACSDLAGLPEGQQIHQMISKTVFQESTY-VVSALINMYSKCGDFHVAKKMFDDGLSGHM 396
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
D+ +WN M++ Y +G A+ + M+ G + + VT ++ A GL E K F
Sbjct: 397 DLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYF 456
Query: 227 EQIKDPNVIS-----WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+++ I +T LI GR +L I + G VS
Sbjct: 457 DELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGL--------------GKEVSLS 502
Query: 282 CLGALASGKEIHG 294
GAL +G +HG
Sbjct: 503 LWGALLAGCSVHG 515
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V +++ Y K +E A R+F+EM R+V SWN+M+ Y NG +Q A+++ M
Sbjct: 110 VWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM---- 165
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
E +VV+ NTVM A G + +A ++F ++++ +V+SWTT+++G S GR + +F
Sbjct: 166 PERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFD 225
Query: 259 EM 260
+M
Sbjct: 226 KM 227
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+++ CN + + G V A +VFDEM +RD W +M+S Y+ GL A ++ + R
Sbjct: 44 EMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFD--R 101
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
D + V+ ++ Y +M + EA ++F ++ NV+SW T+I GY+ GR +L
Sbjct: 102 PDA-QKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALD 160
Query: 256 IFREM 260
+F M
Sbjct: 161 LFGRM 165
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 31/258 (12%)
Query: 46 ADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFP 105
A C + A LF ++ + +V ++T+++A S++G E + +M + V +
Sbjct: 181 AHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVS----WN 236
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
++ AQ E D+ N+++ + + GD+ A ++F M +
Sbjct: 237 AMIAGYAQNGRFDEALKLFERMPER-----DMPSWNTMVTGFIQNGDLNRAEQLFHAMPQ 291
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASK 224
++V +W +MM+ YV +GLS+ A+++ M+ DG +P T TV+ A + + E +
Sbjct: 292 KNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQ 351
Query: 225 VFEQI------KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
+ + I + V+S LI+ YS G V+ ++M +DG LSG +
Sbjct: 352 IHQMISKTVFQESTYVVS--ALINMYSKCGDFHVA----KKMFDDG--------LSGHMD 397
Query: 279 SCRCLGALASGKEIHGYG 296
G +A+ HGYG
Sbjct: 398 LIAWNGMIAAYAH-HGYG 414
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 51/313 (16%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD--DLRSAHSLFRQLPQPNVFAFTSI 72
++ Q KQ+H + + + R + +++++ +A D R A +LF +P PN+F + SI
Sbjct: 20 TMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSI 79
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ ++ + + + + +M + P+ + F ++K+C L++L +
Sbjct: 80 ITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLEQ----VFTLTMKSG 135
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ +SV++++SK G + A +VFDE R+V W S++S
Sbjct: 136 NSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVS---------------- 179
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY--SSVGRH 250
YC GLV+E VF+++ N S + ++SGY +S
Sbjct: 180 -------------------GYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSE 220
Query: 251 GVSLGIFREMVND----GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
GV L FRE+ V + L VL +C +GA GK IH Y + G +
Sbjct: 221 GVQL--FRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEE--NGLEYD 276
Query: 307 RSAGAALLTLYAR 319
G AL+ YA+
Sbjct: 277 LELGTALIDFYAK 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 145/309 (46%), Gaps = 19/309 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S++ S +++ A+Q+ S+R T L+ Y C + +F ++P
Sbjct: 143 VSSVINVFSKHGAIHLARQVFD----ESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMP 198
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-----VSPDGYVFPKVLKACAQLAAL 117
Q N + +++++ + R+ + ++ + E++ K V +G + VL AC + A
Sbjct: 199 QRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAF 258
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
E DL + +++D Y+KCG V+ A +VFD+M +DV +W++M+
Sbjct: 259 -EEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILG 317
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----P 232
NG ++ A+E+ E M G +P+ VT V+ A L E+S++F + + P
Sbjct: 318 LAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITP 377
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++ + ++ + G+ +L IF +N + PD +L C G G+++
Sbjct: 378 SIEHYGCIVDILARSGQVKKAL-IF---INSMHIEPDGAIWGSLLNGCLMHGHYELGQKV 433
Query: 293 HGYGLKIMP 301
Y ++ P
Sbjct: 434 GKYLIEFDP 442
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 10/292 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S + +C +N + +H ++ T LI++Y CD + + +F + +
Sbjct: 421 SAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SER 479
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + ++++ H + I + M + +P+ VL AC+ LA LE
Sbjct: 480 DVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLA-FLEKGERL 538
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+L + +++DMY+KCG +E + VFD M E+DV WN+M+S Y NG +
Sbjct: 539 HRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYA 598
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTL 240
+ A+E+ M +P+ +T +++ A GLV E VF +++ PN+ +T +
Sbjct: 599 ESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCM 658
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ +GR +L E+V + PD G +L +C+ + G I
Sbjct: 659 V---DLLGR-SCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRI 706
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 151/356 (42%), Gaps = 56/356 (15%)
Query: 11 SASKSLNQAKQL---HHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
S SK + + L H + G+ PF KLI +Y + S+ +LF LP + F
Sbjct: 17 SLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTF 76
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
+ S L L Q + Y+ MR + V P+ + FP V + A +
Sbjct: 77 LWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALA 136
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+ V +S + +YS+C ++ A +VFDE+ RDV +W +++ YV NG S+
Sbjct: 137 CKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMG 196
Query: 188 VEVLESM-RV--DGCEPDVVT-----------------------------------RNTV 209
+E + M RV D +P+ T +++V
Sbjct: 197 LECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSV 256
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ YC+ G+ EA + F ++ + +++SWT++I Y+ G + F EM+ + V PD
Sbjct: 257 LSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEML-ENQVCPD 315
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGA------ALLTLYAR 319
G+++ C G G + YG K G I R +LL++Y +
Sbjct: 316 -----GMVIGCILSGF---GNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCK 363
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 43/319 (13%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-- 96
+ + +Y+ CD++ A +F ++P +V A+T+++ + ++G + +E +EM G
Sbjct: 150 SSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDD 209
Query: 97 -VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
P+ AC L L+ L + +SVL MY KCG
Sbjct: 210 SQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCL-LDIQSSVLSMYCKCGVPRE 268
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV----EVLESM-----RVDGC------- 199
A + F E+ +D+ SW SM+ Y G+ V E+LE+ V GC
Sbjct: 269 AYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGN 328
Query: 200 -------------------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
PD + N+++ YC+ G++S A ++F++ ++ W +
Sbjct: 329 SVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFM 387
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
I GY +G++ + +FREM G+ G +S + SC LG + G+ IH +K
Sbjct: 388 IVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAI-ASCGQLGEINLGRSIHCNVIKGF 446
Query: 301 PGEIFYRSAGAALLTLYAR 319
E S +L+ +Y +
Sbjct: 447 VDETI--SVTNSLIEMYGK 463
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 39/289 (13%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
L+ +Y L A LF Q Q ++ + ++ + R G +CI+ + EM++ G+
Sbjct: 355 NSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIR 413
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
+ + +C QL + + V NS+++MY KC + + R
Sbjct: 414 SESVGIVSAIASCGQLGE-INLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWR 472
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-------- 210
+F+ ERDV WN+++S ++ + A+ + + M ++ P+ T V+
Sbjct: 473 IFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAF 531
Query: 211 ---------------------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
D Y + G + ++ +VF+ + + +VI W +ISG
Sbjct: 532 LEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISG 591
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
Y G ++ IF ++ + V P+ +L +C G + GK +
Sbjct: 592 YGMNGYAESAIEIFN-LMEESNVKPNEITFLSLLSACAHAGLVEEGKNV 639
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 43/315 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LQ C+ K Q KQ+H ++ KL QI + + A +F QL P+
Sbjct: 26 FLQNCNNFK---QLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPD 82
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+F + ++ ++ GL ++ I + +M G PD + +P V+ AC + +++
Sbjct: 83 IFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIA-SGVIDFGRLTH 141
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKC-GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V N+++++Y K GDV+ +VFD+MR R+V SW ++++ V
Sbjct: 142 GLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLV----- 196
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
C G + A +VFE+I NV+SWT +I+GY
Sbjct: 197 -------------AC-----------------GKLDTAREVFERIPSKNVVSWTAMINGY 226
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
+ +F M+ D V P+ L ++ +C LG+L G+ +H + LK G
Sbjct: 227 VKNDNPIKAFDLFERMLIDN-VRPNEFTLVSLIKACTDLGSLKLGRRMHDFALK--NGFE 283
Query: 305 FYRSAGAALLTLYAR 319
G AL+ +Y++
Sbjct: 284 LGPFLGTALVDMYSK 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I C L +A +F ++P NV ++T+++ + ++ + + + M V
Sbjct: 189 TTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVR 248
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ + ++KAC L +L + + +++DMYSKCG ++ A +
Sbjct: 249 PNEFTLVSLIKACTDLGSL-KLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVK 307
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VF M R++ +WN+M++ + +G +++ + M G PD +T V+ A ++
Sbjct: 308 VFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQIND 367
Query: 219 VSEASKVF 226
+ K F
Sbjct: 368 LELGQKYF 375
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SL++AC+ SL +++H + L +G PF T L+ +Y+ C L +A +F +
Sbjct: 254 LVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLME 313
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
N+ + ++L HG + ++ + EM GV PD F VL AC Q+ L
Sbjct: 314 VRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDL 368
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 78/355 (21%)
Query: 35 PFFTTKLIQIYA-DCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR 93
P L++ YA ++ A+ LFRQ+P+P + + ++ S+ + I Y M
Sbjct: 10 PISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMY 69
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
+ + + +P +LKACA+++ + DL V N+++ Y+ ++
Sbjct: 70 SQALFGNNLTYPFLLKACARISNV--SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCEL 127
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL---ESMRVDGCEPDVVTR---- 206
A +VFDEM ERD+ SWNS++ Y G +R EVL E MR+ + D VT
Sbjct: 128 GFARKVFDEMSERDLVSWNSLICGY---GRCRRYSEVLVVFEEMRMADVKGDAVTMVKVV 184
Query: 207 -------------------------------NTVMDAYCRMGLVSEASKVFEQIKDPN-- 233
NT++D Y R +V A +VF++++D N
Sbjct: 185 LACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMV 244
Query: 234 -----------------------------VISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
VISWT++IS YS G+ G ++ +F+EM+
Sbjct: 245 SWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTK 304
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V PD ++ VL +C +GAL G+ +H Y K Y G AL+ +Y +
Sbjct: 305 -VKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIY--VGNALIDMYCK 356
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 147/358 (41%), Gaps = 81/358 (22%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+AC+ +++ +H +L G F + LI YA +L A +F ++ + +
Sbjct: 83 LLKACARISNVS-CTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERD 141
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA------ALLE 119
+ ++ S++ + R + + + EMR V D KV+ AC L A++E
Sbjct: 142 LVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIE 201
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER------------- 166
D+ + N+++DMY + V+ A RVFD MR+R
Sbjct: 202 YIEENKVEV-------DVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYG 254
Query: 167 ------------------DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--- 205
DV SW SM+S Y G +AV + + M V +PD +T
Sbjct: 255 KAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVAS 314
Query: 206 --------------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPN 233
N ++D YC+ G V + VFE++ +
Sbjct: 315 VLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRD 374
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+SWT++I+G + G +L +F M+ +G V P G GVL++C G + G E
Sbjct: 375 SVSWTSVIAGLAVNGSADSALNLFSLMLREG-VRPTHGTFVGVLLACAHAGVVDKGLE 431
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y +L +A LF +P +V ++TS+++ +S+ G + + + EM V PD
Sbjct: 249 MIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPD 308
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
VL ACA + AL + D+ V N+++DMY KCG VE VF
Sbjct: 309 EITVASVLSACAHIGAL-DVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVF 367
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+EM +RD SW S+++ NG + A+ + M +G P T V+ A G+V
Sbjct: 368 EEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVD 427
Query: 221 EASKVFEQIK 230
+ + FE ++
Sbjct: 428 KGLEYFESME 437
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC+ +L+ + +H Y+ + + + LI +Y C + S+F ++ +
Sbjct: 314 SVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKR 373
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++TS++A + +G A + ++ M +GV P F VL ACA + +
Sbjct: 374 DSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYF 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNG 182
+++ V+D+ S+ G++ A M + DV W ++S +G
Sbjct: 434 ESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHG 492
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 16/295 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-PQ 63
+ L AC LN +QLH +++ G LI Y C D+ SA +F ++ +
Sbjct: 214 AFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR 273
Query: 64 PNVFAFTSILA-FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++ S+LA H R C+ + + R K V P ++ VL ACA+L L E
Sbjct: 274 KNVVSWCSMLAALVQNHEEERACM-VFLQAR-KEVEPTDFMISSVLSACAELGGL-ELGR 330
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V ++++DMY KCG +E A +VF E+ ER++ +WN+M+ Y G
Sbjct: 331 SVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQG 390
Query: 183 LSQRAVEVLESMRV--DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVI 235
A+ + E M + G P VT +++ R+G V ++FE ++ +P
Sbjct: 391 DIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAE 450
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ ++ +GR G+ + E + + + P +L +CR G GK
Sbjct: 451 HFACVV---DLLGRSGLVDRAY-EFIQNMAIQPTISVWGALLGACRMHGKTELGK 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 144/357 (40%), Gaps = 48/357 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L SLL++ ++ + +H H + H + F + L+ +Y+ D L SA +
Sbjct: 9 LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLT 68
Query: 62 PQPNVFAFTSILA--FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
V +TS+++ H+R L + + MR V P+ + FP V KA A +
Sbjct: 69 HLRTVVTWTSLISGCVHNRRFLP--ALLHFTNMRRDNVQPNDFTFPCVFKASA-FVQIPM 125
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V S DMY K G A +FDEM +R++ +WN+ +S V
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185
Query: 180 CNGLSQRAVEVLESMRVDGCEP-----------------------------------DVV 204
+ S A+ + EP DV
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++D Y + G + A VF +I + NV+SW ++++ + +F + +
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE 305
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
V P +S VL +C LG L G+ +H +K + IF G+AL+ +Y +
Sbjct: 306 --VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIF---VGSALVDMYGK 357
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 43/317 (13%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
++ K +H +++ G + T L+ YA D SA LF ++P+ ++ +FT++L
Sbjct: 133 TIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLM 192
Query: 75 FHSRHG--------------------------------LARQCIETYAEMRFKGVSPDGY 102
+++HG +C+ + M + V P+
Sbjct: 193 CYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVI 252
Query: 103 VFPKVLKACAQLAALL--EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
VL +C Q+ AL ++RV +++DMY KCG +E A +VF
Sbjct: 253 TLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVF 312
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
D++ +DV +WNSM+ Y NGLS+ A+++ M +G P VT ++ A GLV+
Sbjct: 313 DKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVT 372
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
+ ++F +K +P V + +++ GR + + R M D PD
Sbjct: 373 KGWEMFNLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKID----PDPVIWGT 428
Query: 276 VLVSCRCLGALASGKEI 292
+L +CR ++ G+EI
Sbjct: 429 LLWACRLHNNISLGEEI 445
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 133/350 (38%), Gaps = 76/350 (21%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
SKS Q+H ++ KL + Y+ L + +LF + +V+ +TSI
Sbjct: 34 SKSKTHLLQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYTWTSI 93
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ H++ L Q + YA+M + P+ + F +L + ++
Sbjct: 94 IHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLN-----GSTIQPIKSIHCHVIKFG 148
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE--------------------------- 165
D V ++D Y++ GD A ++FD+M E
Sbjct: 149 LCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFD 208
Query: 166 -----RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------- 205
RDV WN M+ Y NG + + M V+ +P+V+T
Sbjct: 209 GMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALE 268
Query: 206 -----------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
++D YC+ G + +A KVF++I +V++W ++I
Sbjct: 269 SGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIM 328
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
GY+ G +L +F EM +G V P +L +C G + G E+
Sbjct: 329 GYAVNGLSEEALKLFHEMHGEG-VRPSYVTFIALLTACGHSGLVTKGWEM 377
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I ++ DL+ F +P N+ ++ S++A + ++ + IE +++M+ KG PD
Sbjct: 345 IISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPD 404
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L L L DL + NS++ MYS+CG++ A VF
Sbjct: 405 RHTLSSILSVSTGLVDLY--LGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVF 462
Query: 161 DEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
+EM+ +DV +WN+M+ Y +G + +A+E+ E M+ +P +T +V++A GLV
Sbjct: 463 NEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLV 522
Query: 220 SEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F I D P V + +L+ +GR G L +++ + V PD
Sbjct: 523 EEGKRQFNSMINDYGIEPRVEHFASLV---DILGRQG-QLQEAMDLIVNMPVKPDKAVWG 578
Query: 275 GVLVSCRC 282
+L +CR
Sbjct: 579 ALLGACRV 586
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ Y K GDV A +FD M ERD SWN+++ YV G + A ++ M +
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPI---- 336
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
PDV++ N+++ + ++G + + FE + N+ISW ++I+GY + ++ +F +M
Sbjct: 337 PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G PD LS +L L L GK+IH + K + ++ +L+T+Y+R
Sbjct: 397 QLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDL---PINNSLITMYSR 451
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ NS++ +S+ GD++ F+ M +++ SWNS+++ Y N + A+E+ M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 196 VDGCEPD-------------------------VVTR---------NTVMDAYCRMGLVSE 221
+ G PD VT+ N+++ Y R G + +
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 457
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVS 279
A VF ++K +VI+W +I GY+ G +L +F M G+ + P VL +
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM--KGLKIQPTYITFISVLNA 515
Query: 280 CRCLGALASGKE-----IHGYGLK 298
C G + GK I+ YG++
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIE 539
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 62/276 (22%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR---SAHSLFRQ 60
NS++ + + +A+QL M L R +I Y C R LF
Sbjct: 73 NSMITGYVQRREIAKARQLFDEMPL----RDIVSWNLIISGYFSCRGSRFVEEGRKLFDI 128
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+PQ + ++ ++++ ++++G Q IE + M + V
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS--------------------- 167
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
CN+V++ + GDV+ A F +M ERD S + ++S V
Sbjct: 168 -------------------CNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVR 208
Query: 181 NGLSQRAVEVLESMRVDGCEPD--VVTRNTVMDAYCRMGLVSEASKVFEQIKDP------ 232
NG A E+L +G E D V NT++ Y + G+V EA VF+ +
Sbjct: 209 NGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 233 -------NVISWTTLISGYSSVGRHGVSLGIFREMV 261
NV+SW +++ Y G + +F MV
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
+ G + A +FD R+ +WNSM++ YV +A ++ + M + D+V+ N
Sbjct: 50 RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPL----RDIVSWNL 105
Query: 209 VMDAY--CRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
++ Y CR V E K+F+ + + +SW T+ISGY+ GR ++ IF M
Sbjct: 106 IISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM 160
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 136 DLRVCNSVLDMYSKCGD---VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ N ++ Y C VE ++FD M +RD SWN+++S Y NG +A+E+ E
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
SM E +VV+ N V++ + G V A F ++ + + S + L+SG G+ +
Sbjct: 159 SM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 214
Query: 253 SLGIFREMVNDG 264
+ I E N+G
Sbjct: 215 AAEILVEYGNEG 226
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I ++ DL+ F +P N+ ++ S++A + ++ + IE +++M+ KG PD
Sbjct: 345 IISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPD 404
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L L L DL + NS++ MYS+CG++ A VF
Sbjct: 405 RHTLSSILSVSTGLVDLY--LGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVF 462
Query: 161 DEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
+EM+ +DV +WN+M+ Y +G + +A+E+ E M+ +P +T +V++A GLV
Sbjct: 463 NEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLV 522
Query: 220 SEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F I D P V + +L+ +GR G L +++ + V PD
Sbjct: 523 EEGKRQFNSMINDYGIEPRVEHFASLV---DILGRQG-QLQEAMDLIVNMPVKPDKAVWG 578
Query: 275 GVLVSCRC 282
+L +CR
Sbjct: 579 ALLGACRV 586
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ Y K GDV A +FD M ERD SWN+++ YV G + A ++ M +
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPI---- 336
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
PDV++ N+++ + ++G + + FE + N+ISW ++I+GY + ++ +F +M
Sbjct: 337 PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G PD LS +L L L GK+IH + K + ++ +L+T+Y+R
Sbjct: 397 QLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDL---PINNSLITMYSR 451
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ NS++ +S+ GD++ F+ M +++ SWNS+++ Y N + A+E+ M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 196 VDGCEPD-------------------------VVTR---------NTVMDAYCRMGLVSE 221
+ G PD VT+ N+++ Y R G + +
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 457
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVS 279
A VF ++K +VI+W +I GY+ G +L +F M G+ + P VL +
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM--KGLKIQPTYITFISVLNA 515
Query: 280 CRCLGALASGKE-----IHGYGLK 298
C G + GK I+ YG++
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIE 539
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 62/276 (22%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR---SAHSLFRQ 60
NS++ + + +A+QL M L R +I Y C R LF
Sbjct: 73 NSMITGYVQRREIAKARQLFDEMPL----RDIVSWNLIISGYFSCRGSRFVEEGRKLFDI 128
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+PQ + ++ ++++ ++++G Q IE + M + V
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS--------------------- 167
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
CN+V++ + GDV+ A F +M ERD S + ++S V
Sbjct: 168 -------------------CNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVR 208
Query: 181 NGLSQRAVEVLESMRVDGCEPD--VVTRNTVMDAYCRMGLVSEASKVFEQIKDP------ 232
NG A E+L +G E D V NT++ Y + G+V EA VF+ +
Sbjct: 209 NGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 233 -------NVISWTTLISGYSSVGRHGVSLGIFREMV 261
NV+SW +++ Y G + +F MV
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
+ G + A +FD R+ +WNSM++ YV +A ++ + M + D+V+ N
Sbjct: 50 RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPL----RDIVSWNL 105
Query: 209 VMDAY--CRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
++ Y CR V E K+F+ + + +SW T+ISGY+ GR ++ IF M
Sbjct: 106 IISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM 160
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 136 DLRVCNSVLDMYSKCGD---VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ N ++ Y C VE ++FD M +RD SWN+++S Y NG +A+E+ E
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
SM E +VV+ N V++ + G V A F ++ + + S + L+SG G+ +
Sbjct: 159 SM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 214
Query: 253 SLGIFREMVNDG 264
+ I E N+G
Sbjct: 215 AAEILVEYGNEG 226
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I ++ DL+ F +P N+ ++ S++A + ++ + IE +++M+ KG PD
Sbjct: 345 IISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPD 404
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L L L DL + NS++ MYS+CG++ A VF
Sbjct: 405 RHTLSSILSVSTGLVDLY--LGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVF 462
Query: 161 DEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
+EM+ +DV +WN+M+ Y +G + +A+E+ E M+ +P +T +V++A GLV
Sbjct: 463 NEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLV 522
Query: 220 SEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F I D P V + +L+ +GR G L +++ + V PD
Sbjct: 523 EEGKRQFNSMINDYGIEPRVEHFASLV---DILGRQG-QLQEAMDLIVNMPVKPDKAVWG 578
Query: 275 GVLVSCRC 282
+L +CR
Sbjct: 579 ALLGACRV 586
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ Y K GDV A +FD M ERD SWN+++ YV G + A ++ M +
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPI---- 336
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
PDV++ N+++ + ++G + + FE + N+ISW ++I+GY + ++ +F +M
Sbjct: 337 PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G PD LS +L L L GK+IH + K + ++ +L+T+Y+R
Sbjct: 397 QLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDL---PINNSLITMYSR 451
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ NS++ +S+ GD++ F+ M +++ SWNS+++ Y N + A+E+ M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 196 VDGCEPD-------------------------VVTR---------NTVMDAYCRMGLVSE 221
+ G PD VT+ N+++ Y R G + +
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 457
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVS 279
A VF ++K +VI+W +I GY+ G +L +F M G+ + P VL +
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM--KGLKIQPTYITFISVLNA 515
Query: 280 CRCLGALASGKE-----IHGYGLK 298
C G + GK I+ YG++
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIE 539
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 62/276 (22%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR---SAHSLFRQ 60
NS++ + + +A+QL M L R +I Y C R LF
Sbjct: 73 NSMITGYVQRREIAKARQLFDEMPL----RDIVSWNLIISGYFSCRGSRFVEEGRKLFDI 128
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+PQ + ++ ++++ ++++G Q IE + M + V
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS--------------------- 167
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
CN+V++ + GDV+ A F +M ERD S + ++S V
Sbjct: 168 -------------------CNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVR 208
Query: 181 NGLSQRAVEVLESMRVDGCEPD--VVTRNTVMDAYCRMGLVSEASKVFEQIKDP------ 232
NG A E+L +G E D V NT++ Y + G+V EA VF+ +
Sbjct: 209 NGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 233 -------NVISWTTLISGYSSVGRHGVSLGIFREMV 261
NV+SW +++ Y G + +F MV
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
+ G + A +FD R+ +WNSM++ YV +A ++ + M + D+V+ N
Sbjct: 50 RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPL----RDIVSWNL 105
Query: 209 VMDAY--CRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
++ Y CR V E K+F+ + + +SW T+ISGY+ GR ++ IF M
Sbjct: 106 IISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM 160
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 136 DLRVCNSVLDMYSKCGD---VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ N ++ Y C VE ++FD M +RD SWN+++S Y NG +A+E+ E
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
SM E +VV+ N V++ + G V A F ++ + + S + L+SG G+ +
Sbjct: 159 SM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 214
Query: 253 SLGIFREMVNDG 264
+ I E N+G
Sbjct: 215 AAEILVEYGNEG 226
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I ++ DL+ F +P N+ ++ S++A + ++ + IE +++M+ KG PD
Sbjct: 345 IISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPD 404
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L L L DL + NS++ MYS+CG++ A VF
Sbjct: 405 RHTLSSILSVSTGLVDLY--LGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVF 462
Query: 161 DEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
+EM+ +DV +WN+M+ Y +G + +A+E+ E M+ +P +T +V++A GLV
Sbjct: 463 NEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLV 522
Query: 220 SEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E + F I D P V + +L+ +GR G L +++ + V PD
Sbjct: 523 EEGKRQFNSMINDYGIEPRVEHFASLV---DILGRQG-QLQEAMDLIVNMPVKPDKAVWG 578
Query: 275 GVLVSCRC 282
+L +CR
Sbjct: 579 ALLGACRV 586
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 8/179 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ Y K GDV A +FD M ERD SWN+++ YV G + A ++ M +
Sbjct: 281 NSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPI---- 336
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
PDV++ N+++ + ++G + + FE + N+ISW ++I+GY + ++ +F +M
Sbjct: 337 PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G PD LS +L L L GK+IH + K + ++ +L+T+Y+R
Sbjct: 397 QLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDL---PINNSLITMYSR 451
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ NS++ +S+ GD++ F+ M +++ SWNS+++ Y N + A+E+ M+
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 397
Query: 196 VDGCEPD-------------------------VVTR---------NTVMDAYCRMGLVSE 221
+ G PD VT+ N+++ Y R G + +
Sbjct: 398 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 457
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVS 279
A VF ++K +VI+W +I GY+ G +L +F M G+ + P VL +
Sbjct: 458 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM--KGLKIQPTYITFISVLNA 515
Query: 280 CRCLGALASGKE-----IHGYGLK 298
C G + GK I+ YG++
Sbjct: 516 CAHAGLVEEGKRQFNSMINDYGIE 539
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 62/276 (22%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR---SAHSLFRQ 60
NS++ + + +A+QL M L R +I Y C R LF
Sbjct: 73 NSMITGYVQRREIAKARQLFDEMPL----RDIVSWNLIISGYFSCRGSRFVEEGRKLFDI 128
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+PQ + ++ ++++ ++++G Q IE + M + V
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS--------------------- 167
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
CN+V++ + GDV+ A F +M ERD S + ++S V
Sbjct: 168 -------------------CNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVR 208
Query: 181 NGLSQRAVEVLESMRVDGCEPD--VVTRNTVMDAYCRMGLVSEASKVFEQIKDP------ 232
NG A E+L +G E D V NT++ Y + G+V EA VF+ +
Sbjct: 209 NGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNE 268
Query: 233 -------NVISWTTLISGYSSVGRHGVSLGIFREMV 261
NV+SW +++ Y G + +F MV
Sbjct: 269 GKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
+ G + A +FD R+ +WNSM++ YV +A ++ + M + D+V+ N
Sbjct: 50 RTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPL----RDIVSWNL 105
Query: 209 VMDAY--CRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
++ Y CR V E K+F+ + + +SW T+ISGY+ GR ++ IF M
Sbjct: 106 IISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM 160
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 136 DLRVCNSVLDMYSKCGD---VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ N ++ Y C VE ++FD M +RD SWN+++S Y NG +A+E+ E
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
SM E +VV+ N V++ + G V A F ++ + + S + L+SG G+ +
Sbjct: 159 SM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 214
Query: 253 SLGIFREMVNDG 264
+ I E N+G
Sbjct: 215 AAEILVEYGNEG 226
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +LL+A S SL K LH ++ ++ T L+ +YA D L+ A +F ++P
Sbjct: 220 LINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMP 279
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V + +++ +S G ++ +E M G+ PD + + + +L ++ E
Sbjct: 280 EKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSI-EWGK 338
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS++DMYS C D+ A ++F +++R V SW++M+ Y +
Sbjct: 339 QLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHD 398
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
A+ + M++ G + D+V +
Sbjct: 399 NCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKT 458
Query: 208 TVMDAYCRMGLVSEASKVFEQIKD--PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+++++Y + G + A K+F + K ++++W ++I+ YS+ G ++ + + +
Sbjct: 459 SLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQ-IKLSI 517
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
V PD G+L +C G + GKEI
Sbjct: 518 VKPDHVTFLGMLTACVNSGLVDKGKEI 544
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 113/227 (49%), Gaps = 3/227 (1%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+ + + KS+ KQLH ++ +GS + L+ +Y+ C DL SA +F + V
Sbjct: 325 ISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTV 384
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++++++ ++ H + + + EM+ G D + +L A A++ AL
Sbjct: 385 VSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGY 444
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE--RDVFSWNSMMSCYVCNGLS 184
+ S+L+ Y+KCG +E A ++F+E + +D+ +WNSM++ Y +G
Sbjct: 445 SLKTNLDSLK-SLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEW 503
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ E+ +++ +PD VT ++ A GLV + ++F+++ D
Sbjct: 504 FQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVD 550
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 39/275 (14%)
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G + E + MR + V P+ +L+A + +L + +L V
Sbjct: 196 GKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSL-KIGKVLHSLVVASNLCKELTV 254
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
++L MY+K ++ A +F++M E+DV WN M+S Y +G + ++E++ M G
Sbjct: 255 NTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGI 314
Query: 200 EPDVVT-----------------------------------RNTVMDAYCRMGLVSEASK 224
PD+ T N+++D Y ++ A K
Sbjct: 315 RPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARK 374
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+F IKD V+SW+ +I GY+ +L +F EM G D + +L + +G
Sbjct: 375 IFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV-DLVIVINILPAFAKIG 433
Query: 285 ALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
AL +HGY LK + +S +LL YA+
Sbjct: 434 ALHYVGYLHGYSLKTNLDSL--KSLKTSLLNSYAK 466
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 10/247 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GV 97
T ++ Y++ D+ A LF +P+ NV ++ +++ + ++G + ++ + EMR V
Sbjct: 255 TSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDV 314
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
+ VL A A L+AL + + VCN+++DMY+KCG++ A
Sbjct: 315 EMNEVTVVSVLPAVADLSAL-DLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAK 373
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
VF+EM E+D SWN++++ Y NG ++ A+EV M +G EP+ +T +V+ A G
Sbjct: 374 LVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCG 433
Query: 218 LVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
LV E + FE ++ P + + +I GR + + + M D P+ L
Sbjct: 434 LVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYD----PNEIIL 489
Query: 274 SGVLVSC 280
+ L +C
Sbjct: 490 TSFLFAC 496
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P Y F +LK C+ ++ DL V S++DMY K GDV A +
Sbjct: 121 PSSYTFTLILKGCS-VSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARK 179
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VFDEM R + SW +++ Y G A ++ + M + DV N ++D Y +MG
Sbjct: 180 VFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGM----VDRDVAAFNVMIDGYVKMGR 235
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVG 248
+ A +F++++ NVISWT+++ GYS G
Sbjct: 236 MDLARDLFDKMRVKNVISWTSMVHGYSEDG 265
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
+V+ Y++CGD+ A ++FD M +RDV ++N M+ YV G A ++ + MRV
Sbjct: 194 AVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRV----K 249
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
+V++ +++ Y G V EA +F+ + + NV+SW +I GY GR +L +F EM
Sbjct: 250 NVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMR 309
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ V + + VL + L AL G +HG+
Sbjct: 310 GNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGF 343
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 12/249 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+I ++ DL+ F +P N+ ++ S++A + ++ + IE +++M+ KG
Sbjct: 269 NSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER 328
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD + +L L L DL + NS++ MYS+CG++ A
Sbjct: 329 PDRHTLSSILSVSTGLVDLY--LGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARH 386
Query: 159 VFDEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
VF+EM+ +DV +WN+M+ Y +G + +A+E+ E M+ +P +T +V++A G
Sbjct: 387 VFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAG 446
Query: 218 LVSEASKVFEQ-IKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LV E + F I D P V + +L+ +GR G L +++ + V PD
Sbjct: 447 LVEEGKRQFNSMINDYGIEPRVEHFASLV---DILGRQG-QLQEAMDLIVNMPVKPDKAV 502
Query: 273 LSGVLVSCR 281
+L +CR
Sbjct: 503 WGALLGACR 511
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 144/326 (44%), Gaps = 22/326 (6%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ + + ++QA ++ M R ++ + D+ SA FR++ +
Sbjct: 64 NTVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGE 119
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDG--YVFPKVLKACAQLAALLEX- 120
+ + + +++ R+G E E +G D Y + ++ Q + E
Sbjct: 120 RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEAR 179
Query: 121 -------XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
++ NS++ Y K GDV A +FD M ERD SWN+
Sbjct: 180 HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNT 239
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
++ YV G + A ++ M + PDV++ N+++ + ++G + + FE + N
Sbjct: 240 VIGGYVQIGDMEEASKLFLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPHKN 295
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ISW ++I+GY + ++ +F +M G PD LS +L L L GK+IH
Sbjct: 296 LISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIH 354
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
+ K + ++ +L+T+Y+R
Sbjct: 355 QFVTKTVVPDL---PINNSLITMYSR 377
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 43/204 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ NS++ +S+ GD++ F+ M +++ SWNS+++ Y N + A+E+ M+
Sbjct: 264 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 323
Query: 196 VDGCEPD-------------------------VVTR---------NTVMDAYCRMGLVSE 221
+ G PD VT+ N+++ Y R G + +
Sbjct: 324 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 383
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVS 279
A VF ++K +VI+W +I GY+ G +L +F M G+ + P VL +
Sbjct: 384 ARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM--KGLKIQPTYITFISVLNA 441
Query: 280 CRCLGALASGKE-----IHGYGLK 298
C G + GK I+ YG++
Sbjct: 442 CAHAGLVEEGKRQFNSMINDYGIE 465
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 147 YSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV-CNGLSQRAVEVLESMRVDGCEPDVVT 205
Y + ++ A ++FDEM RD+ SWN ++S Y C G R VE + + D V+
Sbjct: 5 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG--SRFVEEGRKLFDIMPQRDCVS 62
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
NTV+ Y + G + +A ++FE + + NV+S +++G+ G ++G FR+M
Sbjct: 63 WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGE--- 119
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
D+ +LSG++ G L EI
Sbjct: 120 --RDSASLSGLVSGLVRNGKLDMAAEI 144
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 136 DLRVCNSVLDMYSKCGD---VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ N ++ Y C VE ++FD M +RD SWN+++S Y NG +A+E+ E
Sbjct: 25 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 84
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
SM E +VV+ N V++ + G V A F ++ + + S + L+SG G+ +
Sbjct: 85 SM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 140
Query: 253 SLGIFREMVNDG 264
+ I E N+G
Sbjct: 141 AAEILVEYGNEG 152
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 21/296 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHY---MLLHGSHRKP----FFTTKLIQIYADCDDLRSAH 55
L SLL C++ +L K+ H Y +L G H LI +YA C L A
Sbjct: 146 LMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVAR 205
Query: 56 SLFRQL-PQP-NVFAFTSILAFHSRHGLARQCIETYAEM-RFKG-VSPDGYVFPKVLKAC 111
++F ++ P+ +V +T ++ ++++G A ++ ++EM +F + P+ + VL AC
Sbjct: 206 AMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMAC 265
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A+LAAL D L V N ++DMYSK GDV+ A VFD M +R+ S
Sbjct: 266 ARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAIS 325
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
W S+++ Y +G S+ A V + MR + D +T V+ A G+V +F ++
Sbjct: 326 WTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMS 385
Query: 231 -----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
DP V + + + GR L ++ND + P +L +CR
Sbjct: 386 KDFVVDPGVEHYACMADLFGRAGR----LCEATRLINDMSMEPTPVVWIALLSACR 437
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V N+++DMY+KCG +E A++V++ MR +DV +WN+M++ Y NG + A+ + MR +
Sbjct: 44 VGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREER 103
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVG 248
E DVVT ++V+ Y + G EA VF Q+ PNV++ +L+SG +SVG
Sbjct: 104 IELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVG 157
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 58/306 (18%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
++ Y+ A SLF ++ + +V ++S+++ +++ G + ++ + +M
Sbjct: 79 MVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCS 138
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXX------XXXXXXXXXXXXDLRVCNSVLDMYSKC 150
P+ +L CA + ALL DL N+++DMY+KC
Sbjct: 139 CRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKC 198
Query: 151 GDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGC-------- 199
+E A +FDE+ ++RDV +W M+ Y G + A+++ M + D C
Sbjct: 199 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTI 258
Query: 200 -----------------------------EPDVV-TRNTVMDAYCRMGLVSEASKVFEQI 229
+ DV+ N ++D Y + G V A VF+ +
Sbjct: 259 SCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 318
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFR---EMVNDGMVFPDAGALSGVLVSCRCLGAL 286
N ISWT+L++GY G HG S FR EM + +V D VL +C G +
Sbjct: 319 SKRNAISWTSLLTGY---GMHGCSEDAFRVFDEMRKEALVL-DGITFLVVLYACSHSGMV 374
Query: 287 ASGKEI 292
G ++
Sbjct: 375 DRGIDL 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 35/132 (26%)
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM- 265
N ++D Y + G + +ASKV+E+++ +V++W +++GYS GR +L +F +M + +
Sbjct: 46 NALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIE 105
Query: 266 ------------------------VF---------PDAGALSGVLVSCRCLGALASGKEI 292
VF P+ L +L C +GAL GKE
Sbjct: 106 LDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKET 165
Query: 293 HGYGLK-IMPGE 303
H Y +K I+ GE
Sbjct: 166 HCYSIKFILKGE 177
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
+++A +F + P+ ++ A+T+++ ++G+ + + + EMR KGV DG+ VL+A
Sbjct: 157 MKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRA 216
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A + D V +++DMY KCG E A +VFDEM RDV +
Sbjct: 217 AALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVA 276
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------- 210
W +++ +V Q A+ M +D P+ T +V+
Sbjct: 277 WTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYME 336
Query: 211 ---------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
D Y + G V +A VFE ++ NV +WT +I+G + G +L
Sbjct: 337 HNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALN 396
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI-----HGYGLK 298
IF M+ G+ P+ GVL +C G + GK++ H Y LK
Sbjct: 397 IFSRMLESGLR-PNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLK 443
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 54/336 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHS----- 56
N++ ++L Q Q+ ++ G + + F KLIQ C L +
Sbjct: 9 NAIASLSKNHQNLKQWNQIQSTIITSGLYTLQDAIFVAKLIQ----CAPLSQPQTSSLRL 64
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
L + PN F ++ + + +YA+M GV PD + FP +LK ++
Sbjct: 65 LLNTIHTPNTRLFNKLIT-----SFPKTTLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGV 119
Query: 117 LLEXXXXXXXXXXXXX-XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ D VCN + + G ++ A +VFDE ERD+ +W +++
Sbjct: 120 PNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM------------------------- 210
+ +V NG+ A+ MR+ G D T +V+
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 211 -----------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
D Y + G +A KVF+++ +V++WT +++G+ ++ +L FR
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRR 299
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
M+ D +V P+ L+ VL +C +GAL G+ +H Y
Sbjct: 300 MLLDNVV-PNEFTLTSVLSACAHVGALDQGRLVHRY 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 10/257 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ +Y C A +F ++P +V A+T ++A + + + + M V P+
Sbjct: 249 LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPN 308
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ VL ACA + AL + + + S++DMY+KCG V+ A VF
Sbjct: 309 EFTLTSVLSACAHVGAL-DQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVF 367
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ ++ ++V +W +M++ +G + A+ + M G P+ VT V+ A G V
Sbjct: 368 ENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVD 427
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E K+FE ++ PN+ + ++ +GR G L ++++++ + P G L
Sbjct: 428 EGKKLFEMMRHTYHLKPNMEHYGCMV---DLLGRAG-CLEDAKQIIDNMPMKPSPGVLGA 483
Query: 276 VLVSCRCLGALASGKEI 292
+L +C G+ I
Sbjct: 484 LLGACVSHKDFVMGEHI 500
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ +L+Q + +H YM + + T L+ +YA C + A +F L
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQ 371
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV +T+++ + HG A + ++ M G+ P+ F VL AC+ + E
Sbjct: 372 VKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKK 431
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ ++D+ + G +E A ++ D M
Sbjct: 432 LFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNM 472
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
+++A +F + P+ ++ A+T+++ ++G+ + + + EMR KGV DG+ VL+A
Sbjct: 157 MKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRA 216
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A + D V +++DMY KCG E A +VFDEM RDV +
Sbjct: 217 AALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVA 276
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------- 210
W +++ +V Q A+ M +D P+ T +V+
Sbjct: 277 WTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYME 336
Query: 211 ---------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
D Y + G V +A VFE ++ NV +WT +I+G + G +L
Sbjct: 337 HNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALN 396
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI-----HGYGLK 298
IF M+ G+ P+ GVL +C G + GK++ H Y LK
Sbjct: 397 IFSRMLESGLR-PNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLK 443
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 54/336 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHS----- 56
N++ ++L Q Q+ ++ G + + F KLIQ C L +
Sbjct: 9 NAIASLSKNHQNLKQWNQIQSTIITSGLYTLQDAIFVAKLIQ----CAPLSQPQTSSLRL 64
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
L + PN F ++ + + +YA+M GV PD + FP +LK ++
Sbjct: 65 LLNTIHTPNTRLFNKLIT-----SFPKTTLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGV 119
Query: 117 LLEXXXXXXXXXXXXX-XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ D VCN + + G ++ A +VFDE ERD+ +W +++
Sbjct: 120 PNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM------------------------- 210
+ +V NG+ A+ MR+ G D T +V+
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 211 -----------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
D Y + G +A KVF+++ +V++WT +++G+ ++ +L FR
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRR 299
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
M+ D +V P+ L+ VL +C +GAL G+ +H Y
Sbjct: 300 MLLDNVV-PNEFTLTSVLSACAHVGALDQGRLVHRY 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 10/257 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ +Y C A +F ++P +V A+T ++A + + + + M V P+
Sbjct: 249 LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPN 308
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ VL ACA + AL + + + S++DMY+KCG V+ A VF
Sbjct: 309 EFTLTSVLSACAHVGAL-DQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVF 367
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ ++ ++V +W +M++ +G + A+ + M G P+ VT V+ A G V
Sbjct: 368 ENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVD 427
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E K+FE ++ PN+ + ++ +GR G L ++++++ + P G L
Sbjct: 428 EGKKLFEMMRHTYHLKPNMEHYGCMV---DLLGRAG-CLEDAKQIIDNMPMKPSPGVLGA 483
Query: 276 VLVSCRCLGALASGKEI 292
+L +C G+ I
Sbjct: 484 LLGACVSHKDFVMGEHI 500
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ +L+Q + +H YM + + T L+ +YA C + A +F L
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQ 371
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV +T+++ + HG A + ++ M G+ P+ F VL AC+ + E
Sbjct: 372 VKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKK 431
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ ++D+ + G +E A ++ D M
Sbjct: 432 LFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNM 472
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 12/290 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L C+ ++ + QLH + + F T L+ +YA C ++ A +F +P
Sbjct: 160 ISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMP 219
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N ++SILA + ++GL + + + + G D ++ + ACA LA L+E
Sbjct: 220 ETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIE-GK 278
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V +S++DMY+KCG + A VF R + WN+M+S + +
Sbjct: 279 QVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHA 338
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF-----EQIKDPNVISW 237
+ A+ + E M+ G PD VT +V++A MGL + K F E P+V+ +
Sbjct: 339 CALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLHY 398
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG-VLVSCRCLGAL 286
+ ++ +GR G+ + + + M F ++ G +L SCR G +
Sbjct: 399 SCMV---DILGRAGLVHKAYDLI--ERMPFSATSSIWGSLLASCRIHGNI 443
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+L ++LQ C+ S+S + H +L G + LI +Y+ C + A +F ++
Sbjct: 58 NLQNILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEM 117
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P +V ++ +++ +R ++ + + +M +G + + VL CA A+LE
Sbjct: 118 PVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILE-C 176
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V ++L +Y+KC ++ A+++F+ M E + +W+S+++ YV N
Sbjct: 177 MQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQN 236
Query: 182 GLSQRAVEVLESMRVDGCEPD-----------------------------------VVTR 206
GL + A+ + ++ G E D +
Sbjct: 237 GLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVT 296
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG---IFREMVND 263
++++D Y + G + EA VF+ + +++ W +ISG+ GRH +L +F +M
Sbjct: 297 SSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGF---GRHACALEAMILFEKMQQR 353
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE 291
G+ FPD VL +C +G G +
Sbjct: 354 GL-FPDDVTYVSVLNACSHMGLHEQGHK 380
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ N +++MYSKC V A VFDEM + V SWN+M+ Q A+ + M
Sbjct: 90 DILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQML 149
Query: 196 VDGCEPDVVTRNTVM------------------------DAYCRMGL-----------VS 220
+G + T ++V+ D+ C +G +
Sbjct: 150 REGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIK 209
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ASK+FE + + N ++W+++++GY G H +L +FR+ G DA +S + +C
Sbjct: 210 DASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFE-QDAFLISSAVCAC 268
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L L GK++H K G Y ++L+ +YA+
Sbjct: 269 AGLATLIEGKQVHAISCKSGFGSNIY--VTSSLIDMYAK 305
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
G E D++T N +++ Y + LV +A VF+++ +V+SW T+I + + + +L +F
Sbjct: 86 GFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLF 145
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
+M+ +G +F + +S VL C A+ ++H + +K+ + G ALL +Y
Sbjct: 146 IQMLREGTLFNEF-TISSVLCECAFKCAILECMQLHAFSIKVSVDSNCF--VGTALLHVY 202
Query: 318 AR 319
A+
Sbjct: 203 AK 204
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 146/354 (41%), Gaps = 82/354 (23%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDL---RSAHSLFRQLPQPNVFAFTS 71
+LN AKQLH ++ + H+ + T L++ + H LF Q+ PN F +++
Sbjct: 23 TLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSA 82
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ ++R+G I Y M VSP + F + L +LL+
Sbjct: 83 LIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTF-------SALFSLLKNPSLGSQLHLHA 135
Query: 132 XX---XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS------------------ 170
DL V N+++ MY K G ++ A +VFDEM RDV +
Sbjct: 136 FLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSAC 195
Query: 171 -------------WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR----------- 206
W SM++ Y N + ++A++ MR G D +T
Sbjct: 196 ELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLG 255
Query: 207 --------------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
+ ++D Y + G V EA VF+ +K+ NV S++++
Sbjct: 256 VSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSM 315
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
I G++ GR ++ +F EM+ +G + P+ G+ +C G + G+++ G
Sbjct: 316 IVGFAVHGRARSAIKLFYEMLENG-IKPNHVTFVGLFTACSHAGMVEQGQQLFG 368
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
HR T+LI YA D+ SA LF LP ++ A+TS++ +S++ + ++ ++ + +
Sbjct: 172 HRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRK 231
Query: 92 MRFKGVSPDGYVFPKVLKACAQLA-ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
MR GV D + ACAQL + ++ V ++++DMYSKC
Sbjct: 232 MREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKC 291
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G+VE A VF M+E +VFS++SM+ + +G ++ A+++ M +G +P+ VT +
Sbjct: 292 GNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLF 351
Query: 211 DAYCRMGLVSEASKVFEQIKD 231
A G+V + ++F +K+
Sbjct: 352 TACSHAGMVEQGQQLFGAMKE 372
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 154/385 (40%), Gaps = 74/385 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L L+ S +K+ N AK +H +L +H TT LI Y + AH LF
Sbjct: 68 LFPFLRFSSHNKNPNLAKSIHATLL--KNHEIHHLTTALISTYINLRLFSYAHRLFLSQS 125
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
PN+ +++++++ S+ +Q + + M + P+ Y + VL AC ++ L +
Sbjct: 126 PPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLTACTRILNL-QFG 184
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V N+++ YSKCG + A +VFDEM ERD+ SWN++MSC V
Sbjct: 185 LQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTVMSCAVQE 244
Query: 182 GLSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASKV--------------- 225
+ + M V DG + D T +T + A GL+ E +V
Sbjct: 245 FMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNV 304
Query: 226 --------------------FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE------ 259
FE++ +VI+WT ++ Y G + L IF E
Sbjct: 305 GNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNC 364
Query: 260 -------------------------MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
MV +G+ D SG+ +C L +++HG
Sbjct: 365 VTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGI-NACSLLADYRVSRQMHG 423
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
+ +K G + ALL +Y R
Sbjct: 424 FAIKFGFGSNVF--VEGALLDMYTR 446
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 7/293 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S + ACS ++Q+H + + G F L+ +Y C + A ++ +L
Sbjct: 402 LSSGINACSLLADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELE 461
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETY--AEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + +TS++ ++R+G R+ + +K + D +L C + +
Sbjct: 462 EVSSVVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIM-DEVALTSMLSLCGTVG-YHDM 519
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+++V N V++MY KCG+V+ A ++F M D+ SWN+++S Y+
Sbjct: 520 GKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLT 579
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY--CRMGLVSEASKVFEQIKDPNVISWT 238
+ RA+E+ M+ +G +PD +T ++ AY + LV + +F +K I T
Sbjct: 580 HRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEPT 639
Query: 239 TL-ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ S + SV H L E +N P A +L CR GK
Sbjct: 640 SQHYSSFISVLGHWGLLEEALETINKMSFKPSAFVWRALLDGCRLHKNTMIGK 692
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 145/362 (40%), Gaps = 68/362 (18%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC+ +L QLH ++ G + F + L+ Y+ C ++A +F ++P+
Sbjct: 170 AVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPER 229
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ ++ ++++ + + + +M G+ D + L ACA L+E
Sbjct: 230 DIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQV 289
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY----- 178
+L V N+++ Y+ GD++ +F+ M RDV +W M+ Y
Sbjct: 290 HAHAVKVGLED-ELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGF 348
Query: 179 -------------------------VC-NGLSQRAVEVLESMRVDGCE------------ 200
+C N +AVE+ M +G E
Sbjct: 349 VDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINA 408
Query: 201 -----------------------PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
+V ++D Y R G + +A K++E++++ + + W
Sbjct: 409 CSLLADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVW 468
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
T+++ GY+ G+ + +F ++ + D AL+ +L C +G GK+IH L
Sbjct: 469 TSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVL 528
Query: 298 KI 299
K
Sbjct: 529 KF 530
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 133/334 (39%), Gaps = 69/334 (20%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-------------------------------S 31
L++ L AC+AS L + KQ+H + + G S
Sbjct: 270 LSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMS 329
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
R T+++++Y + + +F ++P+ N + +L+ R+ + +E +
Sbjct: 330 VRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIR 389
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M +GV + + AC+ LA ++ V ++LDMY++CG
Sbjct: 390 MVEEGVELTDFSLSSGINACSLLAD-YRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCG 448
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE------SMRVD-------- 197
+ A ++++E+ E W SMM Y NG + A + + +D
Sbjct: 449 RMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSML 508
Query: 198 ----------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
G +V N V++ Y + G V +A K+F + +++
Sbjct: 509 SLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIV 568
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
SW TLISGY + + +L I+ +M +G + PD
Sbjct: 569 SWNTLISGYLTHRQGDRALEIWLKMQEEG-IKPD 601
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
H L+ S K+L + KQLH + + G + LI +Y C D+ ++ +F ++
Sbjct: 114 HFRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKI 173
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P V A+ +I+ +R+ A + + + E++ G+ P VL +CA L +L +
Sbjct: 174 DEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSL-DLG 232
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++V +++DMY+KCG ++ A VF +M +RD +W++++ Y +
Sbjct: 233 RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATH 292
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVIS 236
G +A+ +L M+ + +PD +T ++ A GLV E + F + + P++
Sbjct: 293 GDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKH 352
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ ++ GR L + +++ + P +L +C G + GK +
Sbjct: 353 YGCMVDLLGRAGR----LDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRV 404
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 59/332 (17%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD---DLRSAHSLF 58
HL SL+ C+ K L KQ+ Y + TK I + AH LF
Sbjct: 28 HLISLIPKCTTLKEL---KQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLF 84
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
Q+ QPN+ F ++ ++R + I F + L+ +++ AL
Sbjct: 85 DQITQPNIVLFNTMARGYARLNDPLRMITH---------------FRRCLRLVSKVKALA 129
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E ++ V ++++MY+ CGD++ + RVFD++ E V ++N+++
Sbjct: 130 E-GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSL 188
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVT--------------------------------- 205
N + A+ + ++ G +P VT
Sbjct: 189 ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYV 248
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
T++D Y + G + +A VF + + +W+ +I Y++ G ++ + EM +
Sbjct: 249 KVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKE 308
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE-IHG 294
V PD G+L +C G + G E HG
Sbjct: 309 K-VQPDEITFLGILYACSHNGLVEEGFEYFHG 339
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L +C+ SL+ + +H Y+ +G R T LI +YA C L A ++FR +P+ +
Sbjct: 219 VLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRD 278
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
A+++I+ ++ HG Q I EM+ + V PD F +L AC+ + E
Sbjct: 279 TQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFH 338
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV-FSWNSMMSCYVCNGLS 184
++ ++D+ + G ++ A + DE+ + W +++S +G
Sbjct: 339 GMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNV 398
Query: 185 QRAVEVLESM 194
+ V+E +
Sbjct: 399 EMGKRVIERI 408
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYV--------------CNGLSQRAVEVLESMRVD- 197
+E A ++FD++ + ++ +N+M Y C L + + E ++
Sbjct: 77 MEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQLHC 136
Query: 198 -----GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
G ++ T+++ Y G + + +VF++I +P V+++ +I + R
Sbjct: 137 FAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANE 196
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAA 312
+L +FRE+ G+ D L VL SC LG+L G+ +H Y K G Y
Sbjct: 197 ALALFRELQEIGLKPTDVTMLV-VLSSCALLGSLDLGRWMHEYVKKY--GFDRYVKVNTT 253
Query: 313 LLTLYAR 319
L+ +YA+
Sbjct: 254 LIDMYAK 260
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 43/351 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKP-FFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SLL C+++K L+Q L ++ GS+ F TKLI ++ + A +F +
Sbjct: 24 SLLDHCTSTKHLHQILPL---IIKTGSYYNDHLFQTKLINMFFKHGSINEASLVFDTVEH 80
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++L ++++ + Y M+ GV P Y F +L+ C + L E
Sbjct: 81 KQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFEL-EKGRE 139
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
DL V+ Y KCG+++ A +VF+ + E+D+ SW S+++ Y NG
Sbjct: 140 IHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGY 199
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYC----------------RMGLVSEASK--- 224
+RA+++ M+ G + D VT +++ A R+G S+ S
Sbjct: 200 PKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVINA 259
Query: 225 ----------------VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
VFE + + +SW T+I GY+ +G+ + F +M+++G V P
Sbjct: 260 LLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEG-VEP 318
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
A+ L +C LG L G+ +H L + F +LL++Y++
Sbjct: 319 TRVAIMAALTACADLGDLERGRFVH--KLVLQKKLDFEVPVMNSLLSMYSK 367
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 37/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A + K L K +H Y L G K L+ +Y +C R A +F +
Sbjct: 222 LVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMI 281
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ +++ +++ G + + T+ +M +GV P L ACA L LE
Sbjct: 282 NKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGD-LERGR 340
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V NS+L MYSKC V+ AA +F+ ++++ +WN+M+ Y NG
Sbjct: 341 FVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNG 400
Query: 183 LSQRAVEVLESMRVDGCEP-----------------------------------DVVTRN 207
A+ + M+ +P DV
Sbjct: 401 CVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVAT 460
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + G A K+F+ + + +VI+W +I GY + G ++ IF M + ++
Sbjct: 461 ALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIP 520
Query: 268 PDAGALSGVLVSCRCLGALASG 289
D LS V+ +C G + G
Sbjct: 521 NDTTFLS-VISACSHSGFVEEG 541
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 138/302 (45%), Gaps = 10/302 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L AC+ L + + +H +L + L+ +Y+ C + A S+F L +
Sbjct: 327 LTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTN 386
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ +++ ++++G + + + M+ + V PD + V+ A A L+ +
Sbjct: 387 VTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLS-VNRMAKWIHG 445
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
D+ V +++DMY+KCG + A ++FD M ER V +WN+M+ Y +GL +
Sbjct: 446 LAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKE 505
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLI 241
A+++ ++M+ + P+ T +V+ A G V E F+ +K +P++ ++ ++
Sbjct: 506 AIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVV 565
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
G+ + + EM + P L +L +C+ + G++ ++ P
Sbjct: 566 DLLGRAGKLHGAWNLIEEMP----IKPGITVLGAMLGACKIHKNVELGEKAADKLFELDP 621
Query: 302 GE 303
E
Sbjct: 622 DE 623
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 51/345 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L CS +LN KQ+H + L G + + K+I A ++ A ++F ++P
Sbjct: 15 LMNLFNHCS---TLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIP 71
Query: 63 QPNVFAF-TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P+ F + T I F + + I + M+ PD + F +LK A+L +
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKIIARL-RFVNLG 129
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
V NS++ MY D+E A ++F+EM + ++ SWNS++ C+V
Sbjct: 130 KQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYC 189
Query: 182 GLSQRAVEVLESM---RVDGCE--PD----VVTR-------------------------- 206
G A+++ M + +G E PD VVT
Sbjct: 190 GKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSF 249
Query: 207 -------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
N ++D Y + G V EA + F +K NV+SW +I G++S G +L +F
Sbjct: 250 GESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTR 309
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGK---EIHGYGLKIMP 301
M+++ + PD VL +C G + G+ EI I P
Sbjct: 310 MLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKP 354
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 10/305 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ + + +N KQLH + G + LI +Y D+ AH LF ++ QPN
Sbjct: 116 ILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPN 175
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM---RFKG--VSPDGYVFPKVLKACAQLAAL-LE 119
+ ++ SI+ H G + I+ + +M + G + PD L AC + +L
Sbjct: 176 LVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFG 235
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V N+++DMY+KCG VE A F M+ ++V SWN M+ +
Sbjct: 236 RKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFA 295
Query: 180 CNGLSQRAVEVLESMRVDGCE-PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
+G + A+ + M + E PD +T V+ A GLV E + FE + I T
Sbjct: 296 SHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPT 355
Query: 239 TLISG--YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
G +GR G+ + + E++ V +A +L +CR G + G+++ +
Sbjct: 356 IKHYGCMVDLLGRAGLFVEAY-ELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHL 414
Query: 297 LKIMP 301
+++ P
Sbjct: 415 MELEP 419
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 143/354 (40%), Gaps = 68/354 (19%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+A S + N ++H G PF T LI +YA C + A LF ++ P
Sbjct: 126 SLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHP 185
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ A+ I+ + ++G + + +MR + PD + VL AC A L
Sbjct: 186 DAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGH-AGNLSYGRTI 244
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGD-------------------------------V 153
D + ++++MY+ CG V
Sbjct: 245 HEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMV 304
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT-------- 205
+ A +FD+M ERD+ W++M+S Y + Q A+++ + M PD +T
Sbjct: 305 KDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISAC 364
Query: 206 ---------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
N ++D Y + G + +A +VFE + NVISW+
Sbjct: 365 SHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWS 424
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++I+ ++ G ++ +FR M + + P+ GVL +C G + G+++
Sbjct: 425 SMINAFAMHGNADSAIKLFRRM-KEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 32/267 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC----------DDLR 52
L ++L AC + +L+ + +H ++ +G T LI +YA+C D L
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284
Query: 53 SAH---------------------SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
S H +F Q+ + ++ ++++++ ++ ++ ++ + E
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDE 344
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M K PD V+ AC+ + AL + L V N+++DMY+KCG
Sbjct: 345 MLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA-LSVNNALIDMYAKCG 403
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
++ A VF+ M ++V SW+SM++ + +G + A+++ M+ EP+ VT V+
Sbjct: 404 NLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLY 463
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWT 238
A GLV E K+F + + + IS T
Sbjct: 464 ACGHAGLVEEGEKLFSSMINEHGISPT 490
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 122/329 (37%), Gaps = 69/329 (20%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLA 115
+F Q+P P+ +L SR + I Y +R + D + FP +LKA ++++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
A D + ++ MY+ C + A +FD+M D +WN ++
Sbjct: 136 A-FNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMII 194
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA----------------------- 212
Y NG A+ + E MR +PD V TV+ A
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254
Query: 213 ------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
Y G + A K+++ + ++I T ++SGY+ +G + IF +M
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314
Query: 261 VNDGMV------------------------------FPDAGALSGVLVSCRCLGALASGK 290
+ +V PD + V+ +C +GALA
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374
Query: 291 EIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
IH Y + G S AL+ +YA+
Sbjct: 375 WIHTYVDRSGFGRAL--SVNNALIDMYAK 401
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ ACS +L QA +H Y+ G R LI +YA C +L A +F +P+
Sbjct: 359 SVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK 418
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV +++S++ + HG A I+ + M+ + P+G F VL AC + E
Sbjct: 419 NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLF 478
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGL 183
++D+Y + + A + + M +V W S+MS C
Sbjct: 479 SSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMS--ACQVH 536
Query: 184 SQRAVEVLESMRVDGCEPD 202
+ + + R+ EPD
Sbjct: 537 GEAELGEFAAKRLLELEPD 555
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 149/324 (45%), Gaps = 26/324 (8%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQ--LPQPNVFAFT 70
S+++ KQL + G H TTKLI A +L A+SLF+ + N F
Sbjct: 18 SISELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISN 77
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX--------- 121
+++ S Q + Y +M V D Y VLKAC++ L++
Sbjct: 78 TMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDNLV 137
Query: 122 ------XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
D V NS+L YS+CG V A +FD++++ + SWN M+
Sbjct: 138 VVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMI 197
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
S Y + A +LE M C+ VV+ NT++ Y R+G V A +VF + + N +
Sbjct: 198 SAYDLVNDYESADYLLELM---PCKT-VVSWNTLIARYIRLGDVQAARRVFGCMPERNAV 253
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SW ++I+G SV + +L +F EM N G V P L +L +C GAL G +I+
Sbjct: 254 SWNSMIAGCVSVRDYAGALELFSEMQNAG-VKPTEVTLISILGACAETGALEIGHKIYE- 311
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
LK+ +I G AL+ +Y +
Sbjct: 312 SLKVCEHKI-ESYLGNALVNMYCK 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI Y D+++A +F +P+ N ++ S++A +E ++EM+ GV P
Sbjct: 227 LIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPT 286
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+L ACA+ AL E + + N++++MY KCG++ A +F
Sbjct: 287 EVTLISILGACAETGAL-EIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIF 345
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD---GCEPDVVTRNTVMDAYCRMG 217
+ M+ + V WN+M+ +G + ++ M PD VT V+ A G
Sbjct: 346 NGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKG 405
Query: 218 LVSEASKVFEQI 229
LV +A F+ +
Sbjct: 406 LVDKARWYFDHM 417
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 21/296 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHY---MLLHGSHRKP----FFTTKLIQIYADCDDLRSAH 55
L SLL C++ +L K+ H Y +L G H LI +YA C L A
Sbjct: 89 LMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVAR 148
Query: 56 SLFRQL-PQP-NVFAFTSILAFHSRHGLARQCIETYAEM-RFKG-VSPDGYVFPKVLKAC 111
++F ++ P+ +V +T ++ ++++G A ++ ++EM +F + P+ + VL AC
Sbjct: 149 AMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMAC 208
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A+LAAL D L V N ++DMYSK GDV+ A VFD M +R+ S
Sbjct: 209 ARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAIS 268
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
W S+++ Y +G S+ A V + MR + D +T V+ A G+V +F ++
Sbjct: 269 WTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMS 328
Query: 231 -----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
DP V + + + GR L ++ND + P +L +CR
Sbjct: 329 KDFVVDPGVEHYACMADLFGRAGR----LCEATRLINDMSMEPTPVVWIALLSACR 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 49/212 (23%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVL 191
D+ N+++ YS+ G E A +F +MRE DV +W+S++S Y G A++V
Sbjct: 15 DVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVF 74
Query: 192 ESMRVDGCEPDVVTR------------------------------------------NTV 209
M C P+VVT N +
Sbjct: 75 RQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINAL 134
Query: 210 MDAYCRMGLVSEASKVFEQI--KDPNVISWTTLISGYSSVGRHGVSLGIFREMVN-DGMV 266
+D Y + + A +F++I KD +V++WT +I GY+ G +L +F EM D +
Sbjct: 135 IDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCI 194
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
P+ +S VL++C L AL GK+IH Y L+
Sbjct: 195 VPNDFTISCVLMACARLAALRFGKQIHAYVLR 226
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 58/306 (18%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
++ Y+ A SLF ++ + +V ++S+++ +++ G + ++ + +M
Sbjct: 22 MVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCS 81
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXX------XXXXXXXXXXXXDLRVCNSVLDMYSKC 150
P+ +L CA + ALL DL N+++DMY+KC
Sbjct: 82 CRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKC 141
Query: 151 GDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGC-------- 199
+E A +FDE+ ++RDV +W M+ Y G + A+++ M + D C
Sbjct: 142 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTI 201
Query: 200 -----------------------------EPDVV-TRNTVMDAYCRMGLVSEASKVFEQI 229
+ DV+ N ++D Y + G V A VF+ +
Sbjct: 202 SCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 261
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFR---EMVNDGMVFPDAGALSGVLVSCRCLGAL 286
N ISWT+L++GY G HG S FR EM + +V D VL +C G +
Sbjct: 262 SKRNAISWTSLLTGY---GMHGCSEDAFRVFDEMRKEALVL-DGITFLVVLYACSHSGMV 317
Query: 287 ASGKEI 292
G ++
Sbjct: 318 DRGIDL 323
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+E A++V++ MR +DV +WN+M++ Y NG + A+ + MR + E DVVT ++V+
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 213 YCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVG 248
Y + G EA VF Q+ PNV++ +L+SG +SVG
Sbjct: 61 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVG 100
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 64/336 (19%)
Query: 4 NSLLQ--ACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC-----------DD 50
N+LL C AS L ++ QL S RK F T QIY DD
Sbjct: 179 NALLSCYVCCASSPLVKSSQLM------ASARKVFDETPKNQIYEPSWTTMIAGYVRNDD 232
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
L +A L L P A+ ++++ + R GL + +T+ M G+ D Y + ++ A
Sbjct: 233 LVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISA 292
Query: 111 CAQLAALL-------EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
C + + L V N+++ Y+K + A RVFD+M
Sbjct: 293 CGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKM 352
Query: 164 RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
RD+ SW N V+ Y + EA+
Sbjct: 353 PVRDIISW-----------------------------------NAVLSGYVNAQRIEEAN 377
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
+F ++ + NV++WT +ISG + G L +F +M ++G+ P A +G + +C L
Sbjct: 378 SIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLE-PCDYAFAGAITACSVL 436
Query: 284 GALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G+L +G++IH +++ G SAG AL+T+Y+R
Sbjct: 437 GSLDNGQQIHSQVIRL--GHDSGLSAGNALITMYSR 470
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 10/264 (3%)
Query: 45 YADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF 104
Y + + A+S+F ++P+ NV +T +++ +++G + ++ + +M+ +G+ P Y F
Sbjct: 367 YVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAF 426
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
+ AC+ L +L + L N+++ MYS+CG VE A VF M
Sbjct: 427 AGAITACSVLGSL-DNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
D SWN+M++ +G +A+E+ E M + PD +T T++ A GL+ E
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545
Query: 225 VFEQI-----KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
F+ + P + LI G + + + M + A +L
Sbjct: 546 YFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEA----GAPIWEALLAG 601
Query: 280 CRCLGALASGKEIHGYGLKIMPGE 303
CR G + G + L+++PG+
Sbjct: 602 CRIHGNMELGIQAADRLLELIPGQ 625
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+ ACS SL+ +Q+H ++ G LI +Y+ C + SA S+F +P +
Sbjct: 430 ITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDS 489
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
++ +++A ++HG + IE + +M + + PD F +L AC + E
Sbjct: 490 VSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKE 542
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L +CS+ L +Q+H G + L+ +YA+ D + +F Q+P+
Sbjct: 445 STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 504
Query: 65 NVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ S + A Q ++ + EM G P+ F +L A + + +L
Sbjct: 505 DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFS-VLGLGHQ 563
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNG 182
D + N++L Y KC +E +F M ER D SWNSM+S Y+ +G
Sbjct: 564 IHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSG 623
Query: 183 LSQRAVEVLESM-----RVDG------------------------------CEPDVVTRN 207
+ +A++++ M ++DG E DVV +
Sbjct: 624 ILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGS 683
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + G + AS+ FE + N+ SW ++ISGY+ G +L IF M G
Sbjct: 684 ALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQS- 742
Query: 268 PDAGALSGVLVSCRCLGALASG 289
PD GVL +C +G + G
Sbjct: 743 PDHVTFVGVLSACSHVGLVDEG 764
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L A S+ L Q+H +L + L+ Y C+ + +F ++ +
Sbjct: 547 NILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSER 606
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ S+++ + G+ + ++ M +G DG+ F VL ACA +A L E
Sbjct: 607 RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATL-ERGME 665
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++++DMY+KCG ++ A+R F+ M R+++SWNSM+S Y +G
Sbjct: 666 VHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGH 725
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
Q+A+++ M+ G PD VT V+ A +GLV E K F+ + +
Sbjct: 726 GQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGE 773
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 159/366 (43%), Gaps = 52/366 (14%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L+S S SL A LH + G FF LI IY +L SA LF ++
Sbjct: 25 QLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEM 84
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEX 120
PQ N+ +++ +++ ++++ + + + + G+ P+ + L+AC Q + ++
Sbjct: 85 PQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKL 144
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKC-GDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ + N ++ MYS C G ++ A RVFDE++ R+ +WNS++S Y
Sbjct: 145 GMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYC 204
Query: 180 CNGLSQRAVEVLESMRVDGCE--------------------------------------- 200
G + A ++ M+++G E
Sbjct: 205 RRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSG 264
Query: 201 --PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
D+ + +++ + R GL+ A +F+Q+ D N ++ L+ G + + + +F+
Sbjct: 265 FLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFK 324
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGK----EIHGYGLKIMPGEIFYR-SAGAAL 313
EM + +V ++ +L +L + L GK E+H Y + G + R S G AL
Sbjct: 325 EMKD--LVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFR--SGLVDARISIGNAL 380
Query: 314 LTLYAR 319
+ +Y +
Sbjct: 381 VNMYGK 386
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 148/361 (40%), Gaps = 54/361 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L++ + + + + +++H Y+ G + L+ +Y C + +A S+F+ +
Sbjct: 341 LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 400
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P + ++ S+++ + + + + M+ G+ P + L +C+ L L
Sbjct: 401 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG-WLTLG 459
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V N++L +Y++ + +VF +M E D SWNS +
Sbjct: 460 RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG----- 514
Query: 182 GLSQRAVEVLESMRV------DGCEPDVVTRNTVMDA---YCRMGL-------------- 218
L++ VL++++ G P+ VT ++ A + +GL
Sbjct: 515 ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 574
Query: 219 ----VSEASKVF----EQIKDPNVI-----------SWTTLISGYSSVGRHGVSLGIFRE 259
+ A F EQ++D +I SW ++ISGY G ++ +
Sbjct: 575 DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 634
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYA 318
M+ G D + VL +C + L G E+H ++ + ++ G+AL+ +YA
Sbjct: 635 MMQRGQKL-DGFTFATVLSACASVATLERGMEVHACAVRACLESDVV---VGSALVDMYA 690
Query: 319 R 319
+
Sbjct: 691 K 691
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 152/354 (42%), Gaps = 45/354 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGS--HRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+LL + + +SL+ K+LH + ++ F +I Y ++ A LF +P
Sbjct: 10 NLLASTTTFRSLDATKRLHALTITTPPIPNQSIFINNNIITSYISYNNFILARKLFDVMP 69
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q + ++ +++ +SR G + E+ G P+ Y +L C + L +
Sbjct: 70 QRTLVSYNALIKAYSRSGDVNEAWRLVNELMVCGFGPNQYTLTGLL--CCEGLKLFQGYQ 127
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V +++L + +CG ++ A VFD+M+ + + +WN+M+S CNG
Sbjct: 128 LFGLSVKNGVFDVDAFVGSALLGFFGRCGCLDEAFSVFDDMKCKSLVTWNTMLSLLSCNG 187
Query: 183 LSQRAVEVL--ESMR----------------VDGCEPD-------------------VVT 205
+ V+VL E +R + GCE D V
Sbjct: 188 FVED-VKVLFCELLRLGVFLSEGSFVAVLSGIGGCEEDLSYGEQVHCLMTKSGFDCYVNA 246
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N+++ Y R + A ++FEQ+ NV+SW +I GR ++L ++ M+ G+
Sbjct: 247 VNSLIGVYVRCRALCSAERLFEQVPVQNVVSWNMIIDSMVKNGRSQMALEVYLNMLRRGL 306
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V P GV+ SC L L+ G+ +H ++ G G AL+ YA+
Sbjct: 307 V-PSQATFVGVIESCIGLRNLSCGECVHAKVIR--SGFESDVVVGTALVDFYAK 357
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 142/369 (38%), Gaps = 69/369 (18%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
+ L+ +Q+H M G LI +Y C L SA LF Q+P NV ++ I+
Sbjct: 223 EDLSYGEQVHCLMTKSGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVVSWNMII 282
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
++G ++ +E Y M +G+ P F V+++C L L
Sbjct: 283 DSMVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIESCIGLRN-LSCGECVHAKVIRSGF 341
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D+ V +++D Y+K + A FD++ E++V SWN++M Y N S ++ +L
Sbjct: 342 ESDVVVGTALVDFYAKFEKLISAHYCFDQIEEKNVVSWNALMLGY-SNVCSSTSILLLRE 400
Query: 194 MRVDGCEPD------VVTRNTVMD-------------------------AYCRMGLVSEA 222
M GC P+ V+ ++V+D AY R GL++E
Sbjct: 401 MFRSGCFPNEFSFSAVLKSSSVLDLRQLHGLVIRMGYENHEYVLSSLVVAYERNGLINEV 460
Query: 223 SKVFEQIKD--------------------------------PNVISWTTLISGYSSVGRH 250
++ + P+V+SW IS + +
Sbjct: 461 LSFVQEFNNPLHVIPSNIIAGIYNRTGLYNETMKLLSLQERPDVVSWNIAISACARSNNY 520
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG 310
+F+ M + V PD L +C + +L G HG +K + F G
Sbjct: 521 NEVFELFKRM-HSAHVHPDKYTFVTGLCACTKICSLDLGSSFHGLIVKTNSCDTF---VG 576
Query: 311 AALLTLYAR 319
L+ +Y +
Sbjct: 577 NVLIDMYGK 585
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+V ++ ++ +R + E + M V PD Y F L AC ++ +L
Sbjct: 501 RPDVVSWNIAISACARSNNYNEVFELFKRMHSAHVHPDKYTFVTGLCACTKICSL--DLG 558
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N ++DMY KCG +E + +VF+E+ +R+V +W +++S N
Sbjct: 559 SSFHGLIVKTNSCDTFVGNVLIDMYGKCGKIESSVKVFEEITDRNVITWTALISALGLNS 618
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM-GLVSEASKVFEQI 229
++ AV++ +M + G +PD + V+ + CR GLVSE ++F+Q+
Sbjct: 619 YARDAVKIFNNMVLIGFKPDTLALRAVLSS-CRYGGLVSEGMEIFKQM 665
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 133/350 (38%), Gaps = 67/350 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++++C ++L+ + +H ++ G T L+ YA + L SAH F Q+ + N
Sbjct: 316 VIESCIGLRNLSCGECVHAKVIRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQIEEKN 375
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA-----QLAALL-- 118
V ++ +++ +S + + I EM G P+ + F VLK+ + QL L+
Sbjct: 376 VVSWNALMLGYS-NVCSSTSILLLREMFRSGCFPNEFSFSAVLKSSSVLDLRQLHGLVIR 434
Query: 119 ------------------EXXXXXXXXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAAR 158
L V N + +Y++ G +
Sbjct: 435 MGYENHEYVLSSLVVAYERNGLINEVLSFVQEFNNPLHVIPSNIIAGIYNRTGLYNETMK 494
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------------- 205
+ DV SWN +S + E+ + M PD T
Sbjct: 495 LLSLQERPDVVSWNIAISACARSNNYNEVFELFKRMHSAHVHPDKYTFVTGLCACTKICS 554
Query: 206 ---------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS-- 242
N ++D Y + G + + KVFE+I D NVI+WT LIS
Sbjct: 555 LDLGSSFHGLIVKTNSCDTFVGNVLIDMYGKCGKIESSVKVFEEITDRNVITWTALISAL 614
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
G +S R V IF MV G PD AL VL SCR G ++ G EI
Sbjct: 615 GLNSYARDAVK--IFNNMVLIGFK-PDTLALRAVLSSCRYGGLVSEGMEI 661
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 37/307 (12%)
Query: 20 KQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
+ +H Y++ G T L+ +YA +A L++ P ++ T+I++ +S
Sbjct: 272 ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEK 331
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G +E + + + PD VL + D V
Sbjct: 332 GDIESAVECFIQTIQLDIKPDAVALIGVLHGITN-PSHFAIGCTFHGYGVKSGLSNDCLV 390
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N ++ +YS+ ++E A +F +MRE+ + +WNSM+S V G S A+E+ M + G
Sbjct: 391 ANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGK 450
Query: 200 EPDVVT-------------------------RNTV----------MDAYCRMGLVSEASK 224
+PD +T RN V +D Y + G + A K
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEK 510
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
VF IKDP + +W +ISGYS G + G + ++ G+ PD GVL +C G
Sbjct: 511 VFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLK-PDKITFLGVLAACTHGG 569
Query: 285 ALASGKE 291
+ G E
Sbjct: 570 LVYLGLE 576
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 32/318 (10%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
C ++ +L QA+Q+ L G ++ T LI +Y A ++F Q+ +V ++
Sbjct: 67 CPSTAAL-QARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSW 125
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
++ +S++G I+ + +M + P+ +L +C + +
Sbjct: 126 NVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIK 185
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
D + N+++ MY+KC D+E + +FDEM E+ V SWN+M+ Y NGL +A+
Sbjct: 186 AGFGL-DSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAIL 244
Query: 190 VLESMRVDGCEPDVVTRNTVMDA-----------------------------YCRMGLVS 220
+ M +G P VT ++ A Y + G +
Sbjct: 245 YFKEMLKEGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTN 304
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
A ++++ ++I+ T +IS YS G ++ F + + + PDA AL GVL
Sbjct: 305 TAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLD-IKPDAVALIGVLHGI 363
Query: 281 RCLGALASGKEIHGYGLK 298
A G HGYG+K
Sbjct: 364 TNPSHFAIGCTFHGYGVK 381
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 151/351 (43%), Gaps = 47/351 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL +C + + Q + +H + + G L+ +YA CDDL ++ LF ++ +
Sbjct: 162 SLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEK 221
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ +++ + ++GL + I + EM +G P ++ A A
Sbjct: 222 SVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA-------FPENV 274
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D V S++ +Y+K G A +++ +D+ + +++S Y G
Sbjct: 275 HCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDI 334
Query: 185 QRAVE-VLESMRVD----------------------------------GCEPDVVTRNTV 209
+ AVE ++++++D G D + N +
Sbjct: 335 ESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGL 394
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ Y R + A +F +++ +I+W ++ISG G+ ++ +F EM G PD
Sbjct: 395 ISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKK-PD 453
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
A ++ +L C LG L G+ +H Y L+ + E F G AL+ +Y++
Sbjct: 454 AITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF---IGTALIDMYSK 501
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 22 LHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGL 81
H Y + G LI +Y+ D++ +A SLF + + + + S+++ + G
Sbjct: 375 FHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGK 434
Query: 82 ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCN 141
+ +E ++EM G PD +L C QL L D +
Sbjct: 435 SSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF-IGT 493
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
+++DMYSKCG ++ A +VF +++ + +WN+++S Y GL A ++ G +P
Sbjct: 494 ALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKP 553
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGI 256
D +T V+ A GLV + F + P++ + ++ + +G+ G+
Sbjct: 554 DKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIV---ALLGKE----GL 606
Query: 257 FR---EMVNDGMVFPDAGALSGVLVSC 280
F+ E +N + PD+ +L +C
Sbjct: 607 FKEAIEFINKMEIQPDSAVWGALLNAC 633
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL C +L + LH Y+L + + F T LI +Y+ C L A +F + P
Sbjct: 459 SLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDP 518
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ + +I++ +S +GL Y++++ +G+ PD F VL AC
Sbjct: 519 CLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTH 567
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 13/279 (4%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L++A+ + H H + T ++ YA + A +LF +P N+ + ++L+
Sbjct: 53 LHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSA 112
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+ + G+ RQ + +M + V + +L A L + +
Sbjct: 113 YLQSGMTRQAKRFFDDMPERNVVS----WTAMLSGYAGLGWIDDARKVFDEMPER----- 163
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
++ NS++ + GD+E A +VFD+ +++V SWN+M+ YV NG A ++ + +
Sbjct: 164 NVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIE 223
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
C +V+T +++ YCR+G V+EA ++F+ + + NV+SWT +I G++ G + +L
Sbjct: 224 ---CR-NVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALL 279
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+F +M+ P+ ++ +C +G GK++H
Sbjct: 280 LFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHA 318
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
NS++ + L++A++L + + R T +I Y + A +LF +P
Sbjct: 367 FNSMINGYVQAGQLHKAQELFDTVPI----RNKIAWTCMISGYLSAGQVLKASNLFDDMP 422
Query: 63 Q--PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LE 119
+ A+T ++ + ++ L + I +AEM +G SP + + A +A L L
Sbjct: 423 DSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLG 482
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ + NS++ MY+KCG++E A R+F M RD SWNSM+
Sbjct: 483 WQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLS 542
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNV 234
+G + A+ + E+M G PD VT V+ A G V + ++F + + P +
Sbjct: 543 DHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGL 602
Query: 235 ISWTTLISGYSSVGR 249
+ ++I+ GR
Sbjct: 603 EHYVSIINILGRAGR 617
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 15/322 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++++ + ++ AK L + R T +I Y D+ A LF+ +P+
Sbjct: 200 NAMIEGYVENGRMDDAKDLFDQI----ECRNVITWTSMISGYCRVGDVNEAFRLFQIMPE 255
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLA--ALLEX 120
NV ++T+++ + +G R+ + + + M P+ F ++ ACA + L +
Sbjct: 256 KNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQ 315
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD-EMRERDVFSWNSMMSCYV 179
D R+ S++ MYS CG ++ A VF+ +M+ D S+NSM++ YV
Sbjct: 316 LHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYV 375
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI--KDPNVISW 237
G +A E+ +++ + + + ++ Y G V +AS +F+ + D + I+W
Sbjct: 376 QAGQLHKAQELFDTVPI----RNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAW 431
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
T +I GY ++ +F EM+ G P + + + + L G ++H L
Sbjct: 432 TLMIYGYVQNELIAEAINLFAEMMAQG-ASPINSTYAVLFGAVGSVAYLDLGWQLHAMQL 490
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
K + + +L+++YA+
Sbjct: 491 KTIYEYEYDVYLENSLISMYAK 512
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 147 YSKCGDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP--- 201
Y G V A+ +FD+M ++D +W M+ YV N L A+ + M G P
Sbjct: 405 YLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINS 464
Query: 202 ----------------------------------DVVTRNTVMDAYCRMGLVSEASKVFE 227
DV N+++ Y + G + +A ++F
Sbjct: 465 TYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFS 524
Query: 228 QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
+ + ISW ++I G S GR +L ++ M+ G V+PDA GVL +C G +
Sbjct: 525 NMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFG-VYPDAVTFLGVLTACAHAGFVD 583
Query: 288 SGKEIHGYGLK---IMPGEIFYRS 308
G E+ L + PG Y S
Sbjct: 584 KGCELFSVMLNDYALQPGLEHYVS 607
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 63/291 (21%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L A S QAK+ M R T ++ YA + A +F ++P+
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDM----PERNVVSWTAMLSGYAGLGWIDDARKVFDEMPE 162
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-----DGYVFPKVLKACAQLAALL 118
NV ++ S++ R+G + + + + K V +GYV + L +
Sbjct: 163 RNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQI 222
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E ++ S++ Y + GDV A R+F M E++V SW +M+ +
Sbjct: 223 E--------------CRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGF 268
Query: 179 VCNGLSQRAVEV-LESMRVDGCEPD---------------------------VVTRNTVM 210
NG + A+ + L+ M + +P+ ++ R +
Sbjct: 269 AWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLD 328
Query: 211 DAYCRM-----------GLVSEASKVFE-QIKDPNVISWTTLISGYSSVGR 249
D CR+ GL+ A VFE +K+ + S+ ++I+GY G+
Sbjct: 329 DYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQ 379
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 11/271 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I YA A LFR+ P N++A+T++++ + G A + + EMR +GVS
Sbjct: 181 TAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVS 240
Query: 99 -PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
D V V+ ACA +A+ E L + N+++DMY+KC DV A
Sbjct: 241 IADPLVLSSVVGACAN-SAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAK 299
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
+F EMR +DV SW S++ +GL++ A+ + + M + G +P+ VT ++ A +G
Sbjct: 300 YIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVG 359
Query: 218 LVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LVS+ +F+ + + P++ +T L+ +S G + + R M V PD
Sbjct: 360 LVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMP----VKPDEPT 415
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
+ +L +C+ G I + L + P +
Sbjct: 416 WAALLSACKHHGNTKMAVRIADHLLDLKPED 446
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 120/277 (43%), Gaps = 38/277 (13%)
Query: 19 AKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
AK+LH ++ G +H PF T LI Y C L+ A LF LPQ + A+ ++L+ +
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKT-LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXXXXXXXXXXXXXXD 136
L + + +G+ PD +VF ++KACA L ++ ++ D
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
V +S++DMY+K + VFD + E SW +M+S Y +G R +E LE
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSG---RKLEALE---- 198
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
+F + N+ +WT LISG G +L +
Sbjct: 199 ----------------------------LFRESPFKNLYAWTALISGLVQSGNANDALYL 230
Query: 257 FREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
F EM +G+ D LS V+ +C GK++H
Sbjct: 231 FVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVH 267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S++ AC+ S KQ+H ++ G F + L+ +YA C D+ +A +F ++
Sbjct: 247 LSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMR 306
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V ++TSI+ ++HGLA + + Y +M GV P+ F ++ AC+ + + +
Sbjct: 307 RKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRA 366
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
L+ +LD++S+ G ++ A + M + D +W +++S +
Sbjct: 367 LFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHH 426
Query: 182 GLSQRAVEVLESM 194
G ++ AV + + +
Sbjct: 427 GNTKMAVRIADHL 439
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 148/345 (42%), Gaps = 56/345 (16%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL++C+ QLH ++L GS P+ + LI +Y+ A +F + P
Sbjct: 65 LLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNL 124
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM----RF--KGVSPDGYVFPKVLKACAQLAALLE 119
++ ++++ ++ + + + I+ + M RF V+ G V ++ +L L
Sbjct: 125 TISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLH 184
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
DL V NS L MY KCG+VE +VFDE+ +D+ +WN+M+S Y
Sbjct: 185 GCCFKFGFEN------DLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYA 238
Query: 180 CNGLSQRAVEVLESMR-VDGCEPDVVT--------------------------------- 205
NG ++R +E+ MR V G PD VT
Sbjct: 239 QNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNS 298
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQI--KDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
N +++ Y R G + A +VF+ + + +V+SWT +I GY G ++ +F MV
Sbjct: 299 FLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMV 358
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEI-----HGYGLKIMP 301
G V PD VL +C G G E YGL+ P
Sbjct: 359 RSG-VKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGP 402
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 119/249 (47%), Gaps = 13/249 (5%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSP 99
+ +Y C ++ +F ++ ++ + ++++ ++++G AR+ +E Y EMR GV+P
Sbjct: 202 FLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNP 261
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
D VL +CA L A + + N++++MY++CG++ A V
Sbjct: 262 DPVTLLGVLCSCANLGAQ-GIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREV 320
Query: 160 FDEMRERD--VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
FD M ER V SW +++ Y +G + AVE+ + M G +PD +V+ A G
Sbjct: 321 FDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAG 380
Query: 218 LVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
L + + F++++ P ++ L+ GR ++ ++++ V PD
Sbjct: 381 LTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAM----DLIDLMKVKPDGPV 436
Query: 273 LSGVLVSCR 281
+L +C+
Sbjct: 437 WGALLGACK 445
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 141/341 (41%), Gaps = 59/341 (17%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD---------------- 49
+L+A S SL+ A+ LH + +G F LI++Y+ D
Sbjct: 119 ILKASSQLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRD 178
Query: 50 ---------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
L A LF ++PQ N + +++A +S+ L R+ +E + EM
Sbjct: 179 IVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIG 238
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
PD VL ACAQL L E D + ++D+Y+KCG VE
Sbjct: 239 LEFIPDNIALVSVLSACAQLGEL-EQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVE 297
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A F+ +DVF+WN+M+ + +G +E M +G +PD VT V+
Sbjct: 298 IARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCS 357
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH-----------GV---SLGIFREM 260
GLV EA KVF++++ + G + G+H G+ S + + M
Sbjct: 358 HAGLVCEARKVFDEMET---------VYGVAREGKHYGCMADMLARAGLIEESRELIKGM 408
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
N G VF G L G CR G + K+ ++I P
Sbjct: 409 PNGGDVFAWGGLLGG----CRIHGNVEIAKQAAQQVMEIKP 445
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 51/308 (16%)
Query: 1 MHLNSLLQACSASKSLNQAKQL--------HHYM----LLHGSHRKPFFTTKLIQIYADC 48
M + +L++ C + K L+Q L HH + +L + + I+ Y++
Sbjct: 1 MSMLNLIKQCKSIKQLHQIHALTITSNLLPHHPLSILNILLSTFTSLLNSKNNIKTYSNS 60
Query: 49 DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL 108
A SLF +P P F F +++ H+ ++ + +R ++ D + FP +L
Sbjct: 61 FLTTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLIL 120
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
KA +QL + L D V NS++ +YS V A +VF E RD+
Sbjct: 121 KASSQLHS-LSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDI 179
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
S+N M+ +V N RA E +F++
Sbjct: 180 VSYNVMIDGFVKNFKLDRARE-----------------------------------LFDE 204
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCRCLGALA 287
+ N ++W T+I+GYS ++ +F EM+ G+ F PD AL VL +C LG L
Sbjct: 205 MPQRNEVTWGTMIAGYSQAKLCREAVELFNEMI--GLEFIPDNIALVSVLSACAQLGELE 262
Query: 288 SGKEIHGY 295
G+ +H Y
Sbjct: 263 QGRFVHDY 270
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC+ L Q + +H Y+ +G + TT L+ +YA C + A F
Sbjct: 248 LVSVLSACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCT 307
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+VF + ++L + HG +E ++ M +G+ PDG F VL C+ + E
Sbjct: 308 NKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARK 367
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMM-SCYVC 180
+ + + DM ++ G +E + + M DVF+W ++ C +
Sbjct: 368 VFDEMETVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIH 427
Query: 181 NGLS---QRAVEVLESMRVDG 198
+ Q A +V+E DG
Sbjct: 428 GNVEIAKQAAQQVMEIKPEDG 448
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
AH LF ++P+P+V ++ +++A H+R G Q + + E+R G+ DG+ V+ A +
Sbjct: 95 AHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVE 154
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE--RDVFSW 171
L+ VCN+VL Y + G + A RVF EM E RD+ SW
Sbjct: 155 DVGLVRQLHCFALLCGYDCYAS---VCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSW 211
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM--------------- 216
N+M+ + +A+ + M G E D+ T +V+ A+ +
Sbjct: 212 NAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIK 271
Query: 217 -----------GLVS-----------EASKVFEQIKDPNVISWTTLISGYSSVGRH---- 250
GL+ E KVFE+I P+++ W T+ISG+S +H
Sbjct: 272 SGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFS---QHEDLC 328
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+L FREM G PD + V+ +C L + + GK++H +K
Sbjct: 329 EDALSSFREMQRVGFC-PDDCSFVCVISACSNLSSPSVGKQVHALAIK 375
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 16/321 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC--DDLRSAHSLFRQ 60
+ S+L A + K L Q H M+ G HR + LI +Y+ C + +F +
Sbjct: 246 MASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEE 305
Query: 61 LPQPNVFAFTSILAFHSRH-GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+P+P++ + ++++ S+H L + ++ EM+ G PD F V+ AC+ L++
Sbjct: 306 IPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSV 365
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V N+ + MYSKCG++ A R+FD M E++ S NSM++ Y
Sbjct: 366 GKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYA 425
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNV 234
+G ++++ E M + P+ +T +V+ A G V E K F +K +P
Sbjct: 426 QHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEA 485
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
++ +I G+ + I M D P + + +L +C+ G + +
Sbjct: 486 EHYSCMIDLLGRAGKLNKAERIIETMPFD----PGSIEWAALLGACKKHGNVELAVKAAN 541
Query: 295 YGLKIMPGEIFYRSAGAALLT 315
L++ P Y +A +L+
Sbjct: 542 KFLQLEP----YNAAPYVMLS 558
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
P+V + NT++ A + L + A ++F++I +P+V+S+ TLI+ ++ G G ++ +F+E+
Sbjct: 74 PNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEV 133
Query: 261 VNDGMVFPDAGALSGVL-VSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G+V D LSGV+ S +G + +++H + L + G Y S A+L Y R
Sbjct: 134 REVGLVL-DGFTLSGVISASVEDVGLV---RQLHCFAL--LCGYDCYASVCNAVLACYGR 187
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 16/295 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-PQ 63
+ L AC LN +QLH +++ G LI Y C D+ SA +F ++ +
Sbjct: 214 AFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNR 273
Query: 64 PNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++ S+L A H R C+ + ++R K V P ++ VL ACA+L L E
Sbjct: 274 KNVVSWCSMLTALVQNHEEERACM-VFLQVR-KEVEPTDFMISSVLSACAELGGL-ELGR 330
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V ++++D+Y KCG +E A +VF E+ E ++ +WN+M+ Y G
Sbjct: 331 SVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQG 390
Query: 183 LSQRAVEVLESMRVD--GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVI 235
A+ + E M + G P VT +++ R+G V ++FE ++ +P
Sbjct: 391 DIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPGAE 450
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ ++ +GR G+ + E + + + P +L +CR G GK
Sbjct: 451 HFACVV---DLLGRSGLVDRAY-EFIQNMPIQPTISVWGALLGACRMHGKTELGK 501
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 152/361 (42%), Gaps = 56/361 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L LL++ ++ + +H H + H + F + L+ +Y+ D L SA +
Sbjct: 9 LGCLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFT 68
Query: 62 PQPNVFAFTSILA--FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
V +TS+++ H+R L + + MR V P+ + FP V KA A L +
Sbjct: 69 HLRTVVTWTSLISGCVHNRRFLP--ALLHFTNMRRDNVQPNDFTFPCVFKASA-LMQIPM 125
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V S DMY K G A +FDEM R++ +WN+ Y+
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNA----YI 181
Query: 180 CNGLS-QRAVEVL--------------------------ESMRVD------------GCE 200
N + +R+++V+ + MR++ G +
Sbjct: 182 SNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYK 241
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFRE 259
DV N ++D Y + G + A VF +I + NV+SW ++++ + +F +
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQ 301
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYA 318
+ + V P +S VL +C LG L G+ +H +K + IF G+AL+ LY
Sbjct: 302 VRKE--VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIF---VGSALVDLYG 356
Query: 319 R 319
+
Sbjct: 357 K 357
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ +K ++ A++L M R +I Y D+ A F +PQ
Sbjct: 301 NAMIAGYVQTKKMDIARELFESMPC----RNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ +I+A +++ G + + + E++ G S + F L CA +AAL E
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAAL-ELGKQ 415
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
V N++L MY KCG ++ A F+ + E+DV SWN+M++ Y +G
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KDPNVIS----WT 238
++A+ V ESM+ G +PD +T V+ A GL+ ++ F + KD VI +T
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYT 535
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+I GR + + R M P A + +L + R G G++ K
Sbjct: 536 CMIDLLGRAGRLEEAQDLIRNMP----FQPGAASWGALLGASRIHGNTELGEKAAEMVFK 591
Query: 299 IMP 301
+ P
Sbjct: 592 MEP 594
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 56/363 (15%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ + N A+ L M R F ++ Y L A LF +P+
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE 139
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALL---- 118
+V ++ S+L+ ++++G + E + M K +S +G + V + A LL
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESK 199
Query: 119 -----------------EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD 161
+ D N+++ Y++ G + A R+FD
Sbjct: 200 SDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD 259
Query: 162 EMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-------------------RVDGCEP- 201
E RDVF+W +M+S YV NG+ A + M ++D
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 202 -------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
++ + NT++ Y ++G +++A K F+ + + +SW +I+GY+ G + +L
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
+F E+ DG A L +C + AL GK+IHG +K+ G + G ALL
Sbjct: 380 NMFVEIKQDGESLNRA-TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCF--VGNALL 436
Query: 315 TLY 317
+Y
Sbjct: 437 AMY 439
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 48 CDDLRSAHSLFRQLPQPNVFAFTSILAFH---SRHGLARQCIETYAEMRF--KGVSPDGY 102
CD SA +F +P+ + ++ ++++ + S+ LAR + E V GY
Sbjct: 65 CD---SALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGY 121
Query: 103 VFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE 162
V L +L L+ D+ NS+L Y++ G V+ A VFD
Sbjct: 122 VRNCRLGDARRLFDLMPEK--------------DVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 163 MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
M E++ SWN +++ YV NG + A + ES + D+++ N +M + R + +A
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESK----SDWDLISWNCLMGGFVRKKKLGDA 223
Query: 223 SKVFEQIKDPNVISWTTLISGYSSVG 248
+F+++ + ISW T+ISGY+ G
Sbjct: 224 RWLFDKMPVRDAISWNTMISGYAQGG 249
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ N + + + G + A VF+ M R S+N+M+S Y+ N A + + M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
E D+ + N ++ Y R + +A ++F+ + + +V+SW +L+SGY+ G +
Sbjct: 107 ---PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163
Query: 256 IFREM 260
+F M
Sbjct: 164 VFDNM 168
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 10/283 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+ C+ + + ++A QLH +L G T L+ +YA + A +F ++ + ++
Sbjct: 92 LKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDI 151
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ ++++ ++ + I + M+ +G P+ L AC+QL AL E
Sbjct: 152 ASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKE-GEIVHR 210
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQ 185
++ VCN+V+DM++KCG V+ A VF+ M + + +WN+M+ + NG
Sbjct: 211 YVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGY 270
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLI 241
+A+++L+ M +DG PD V+ + A GLV E ++F+ +K NV + +++
Sbjct: 271 KALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVKLNVKHYGSMV 330
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
GR L E++N +FPD +L +C+ G
Sbjct: 331 DLLGRAGR----LKEAYEIINSMPMFPDVVLWQSLLGACKTYG 369
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 126/308 (40%), Gaps = 40/308 (12%)
Query: 20 KQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
KQL +++ G + TKL+++++ +L A ++FRQ+ P + +IL +
Sbjct: 2 KQLQAHLITTGKFQFHPSRTKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDYNAILRGLA 61
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
+ Q I Y +M D LK CA+ A E L
Sbjct: 62 QSSEPTQSISWYRDMLCCVQRVDALTCSFALKGCARALAFSEATQLHSQVLRFGFDADVL 121
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
+ + +Y+K G ++ A +VFDEM +RD+ SWN+M+S A+ + M+ +
Sbjct: 122 LLTTLLD-VYAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEE 180
Query: 198 GCEPDVVTR-----------------------------------NTVMDAYCRMGLVSEA 222
G P+ VT N V+D + + G V +A
Sbjct: 181 GWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKA 240
Query: 223 SKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
VFE + ++I+W T+I ++ G +L + M DG PDA + G L +C
Sbjct: 241 YSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTC-PDAVSYLGALCACN 299
Query: 282 CLGALASG 289
G + G
Sbjct: 300 HAGLVDEG 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + G + A KVF+++ ++ SW +ISG + R ++ +F M +G D
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTV 189
Query: 273 LSGVLVSCRCLGALASGKEIHGYGL 297
L G L +C LGAL G+ +H Y L
Sbjct: 190 L-GALSACSQLGALKEGEIVHRYVL 213
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 47/310 (15%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC--DDLRSAHSLFRQLPQPNVFAFTSIL 73
+ Q KQ+H + + + R + +++++ +A D R A +LF +P PN+F + SI+
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
++ + + + +M + P+ + F ++KAC L++L +
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQ----VFTLSMKLGN 116
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D+ +SV++ +SK + A +VFDE R+V W S++S Y
Sbjct: 117 SSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGY--------------- 161
Query: 194 MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
C GLV+EA VF+++ N S++ ++SGY G
Sbjct: 162 --------------------CSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEG 201
Query: 254 LGIFREMVND----GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
+ +FRE+ + + L VL +C +GA GK IH Y + G +
Sbjct: 202 VQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEE--NGLEYDLEL 259
Query: 310 GAALLTLYAR 319
G AL+ Y +
Sbjct: 260 GTALIDFYMK 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 146/309 (47%), Gaps = 19/309 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S++ A S +++ A+Q+ S+R T L+ Y C + A +F ++P
Sbjct: 123 VSSVINAFSKHSAIHLARQVFD----ECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMP 178
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-----VSPDGYVFPKVLKACAQLAAL 117
N +++++++ + R+G + ++ + E++ K + +G + VL AC + A
Sbjct: 179 LRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAF 238
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
E DL + +++D Y KCG V+GA +VF++M +DV +W++M+
Sbjct: 239 -EEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILG 297
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----P 232
NG ++ A+E+ E M G +P+ VT V+ A L E++++F + + P
Sbjct: 298 LAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITP 357
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++ + ++ + G+ +L +N + PD +L C G G+++
Sbjct: 358 SIEHYGCVVDVLARSGQVKKAL----TFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKV 413
Query: 293 HGYGLKIMP 301
Y ++ P
Sbjct: 414 GKYLIEFEP 422
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 154/369 (41%), Gaps = 81/369 (21%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH---SLFRQLP 62
LL+ACS S +Q + LH ++ G H P +T LI YA + RS H LF ++P
Sbjct: 41 LLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAA--NTRSFHYALELFDEMP 98
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QP + AF ++L+ SR+G Q + + ++ F + P+ +L A+
Sbjct: 99 QPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLS--ARDVKNQSHVQ 156
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V S++ YSKCG + + +VF+ +R ++V ++N+ MS + NG
Sbjct: 157 QVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNG 216
Query: 183 LSQRAVEVLE-------------------------------------SMRVDGCEPDVVT 205
+ +V + SM+++ C+ V+
Sbjct: 217 FHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACD-HVMV 275
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+++D Y + G A VF + + N+I+W ++I+G ++ +F MV++G
Sbjct: 276 VTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEG- 334
Query: 266 VFPDAG---------ALSGVLVSC-------RCLG-------------------ALASGK 290
+ PD+ A GV V +C G L S K
Sbjct: 335 ILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAK 394
Query: 291 EIHGYGLKI 299
IHGY L+I
Sbjct: 395 AIHGYALRI 403
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+GL ++ + Y+ + +P+ + FP +LKAC+ L++ +
Sbjct: 13 NGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHT 72
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE-----S 193
+ + A +FDEM + + ++N+++S NG +AV + +
Sbjct: 73 STALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWN 132
Query: 194 MRVD-----------------------------GCEPDVVTRNTVMDAYCRMGLVSEASK 224
+R + G E DV +++ AY + G++ ++K
Sbjct: 133 IRPNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNK 192
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
VFE ++ NV+++ +SG G H V +F++M + P+ L V+ +C L
Sbjct: 193 VFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLS 252
Query: 285 ALASGKEIHGYGLKI 299
+ GK++HG +K+
Sbjct: 253 NIRLGKQVHGLSMKL 267
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 10/234 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SLL C S L AK +H Y L + F T L+ Y C + A +F Q
Sbjct: 377 LTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFD 436
Query: 63 -QPNVFAF-TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P+ AF +++ + +G E + EM + V P+ F VL AC+ + +E
Sbjct: 437 VKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSH-SGQIER 495
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS---C 177
V+D+ + G + A + E+ E ++S++ C
Sbjct: 496 GLRFFRMIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQELAEPPASVFDSLLGACRC 555
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
Y+ + L + L + P VV N Y +G SE ++ I D
Sbjct: 556 YLDSNLGEEMAMKLIDIEPKNPAPLVVLSNI----YAALGRWSEVERIRGLITD 605
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 28/326 (8%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQ--LPQPNVFAFT 70
S+++ KQL + G H TTKLI A +L A+SLF+ + N F
Sbjct: 18 SMSELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISN 77
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
+++ S Q + Y +M V D Y VLKAC++ L++
Sbjct: 78 TMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDDDN 137
Query: 131 XXX-----------------XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
D V NS+L YS+CG V A +FD++++ + SWN
Sbjct: 138 LVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNI 197
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
M+S Y + A +LE M C+ V++ NT++ Y R+G V A +VF + + N
Sbjct: 198 MISAYDRVDDYELADHLLELM---PCKT-VISWNTLIARYIRLGDVQAARRVFGCMPERN 253
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+SW ++I+G SV + +L +F EM N G V P L +L +C GAL G +I+
Sbjct: 254 AVSWNSMIAGCVSVRDYAGALELFSEMQNAG-VKPTEVTLISILGACAETGALEIGHKIY 312
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
LK+ +I G AL+ +Y +
Sbjct: 313 E-SLKVCEHKI-ESYLGNALVNMYCK 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI Y D+++A +F +P+ N ++ S++A +E ++EM+ GV P
Sbjct: 229 LIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPT 288
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+L ACA+ AL E + + N++++MY KCG++ A +F
Sbjct: 289 EVTLISILGACAETGAL-EIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIF 347
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD---GCEPDVVTRNTVMDAYCRMG 217
+ M+ + V WN+M+ +G + ++ M PD VT V+ A G
Sbjct: 348 NGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKG 407
Query: 218 LVSEASKVFEQI 229
LV +A F+ +
Sbjct: 408 LVDKARWYFDHM 419
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 42/261 (16%)
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
+ PD ++ K+LK C L L + DL + NS+L MY+KCG +E A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKL-KQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIA 145
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL------------------------- 191
+VFDEM +DV +W SM++ Y +G + A L
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205
Query: 192 -------ESMRVDGC------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
+ ++ GC + +V ++++D Y R G + E+ VF++++ N +SW
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
LISG++ G +LG+F +M +G + S +L S G+L GK +H + +K
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEF-TYSALLCSSSTTGSLEQGKWLHAHMMK 324
Query: 299 IMPGEIFYRSAGAALLTLYAR 319
G+ G LL +YA+
Sbjct: 325 --SGKKLVGYVGNTLLHMYAK 343
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 15/322 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+SL++ C S KQ+H +G F + L+ +YA C +LR + +F +L
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N ++ ++++ +R G + + + +M+ +G + + +L + + + LE
Sbjct: 258 SKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGS-LEQGK 316
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V N++L MY+K G++ A +VFD + + DV S NSM+ Y +G
Sbjct: 317 WLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHG 376
Query: 183 LSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISW 237
L + AVE+ E M + EP+ +T +V+ A GL+ E FE +K +P + +
Sbjct: 377 LGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHY 436
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
TT++ + GR G+ L + + + + P+A +L + + + E+ Y
Sbjct: 437 TTVVDLF---GRAGL-LDQAKSFIEEMPIEPNATIWGALLGASK----MHKNTEMGAYAA 488
Query: 298 -KIMPGEIFYRSAGAALLTLYA 318
K++ + FY A L +YA
Sbjct: 489 QKVLELDPFYPGAHTLLSNIYA 510
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++LL + S + SL Q K LH +M+ G + L+ +YA ++ A +F +L +
Sbjct: 300 SALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVK 359
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V + S+L +++HGL ++ +E + EM + + P+ F VL AC+ A LL+
Sbjct: 360 VDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSH-AGLLDEGL 418
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
L +V+D++ + G ++ A +EM E + W +++
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL------ 472
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
G S+ + +NT M AY A KV E DP TL+
Sbjct: 473 GASK------------------MHKNTEMGAYA-------AQKVLEL--DPFYPGAHTLL 505
Query: 242 SG-YSSVGRHGVSLGIFREMVNDGM 265
S Y+S G+ + +EM + G+
Sbjct: 506 SNIYASAGQWKDVAKVRKEMKDSGL 530
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++LL A S + ++A +L + ++ + +I +Y +C + A +F+ +P
Sbjct: 302 STLLDAYSKCQHSHEACELFDELKVYDA----ILLNTMITVYCNCGRIEDAKGIFQTMPN 357
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ SILA ++T++ M V D + F V+ ACA + + LE
Sbjct: 358 KTLISWNSILA-----------LDTFSRMNMLDVKMDKFSFASVISACA-IKSSLELGEQ 405
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D + S++D Y KCG VE +VFD M D SWN+M+ Y NG
Sbjct: 406 VFGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATNGY 465
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
A+ + M G P +T N V+ A GLV E +F +K +P + ++
Sbjct: 466 GIEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKHEYDINPGIEHYS 525
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ ++ G G ++ + EM
Sbjct: 526 CMVDLFARAGCFGEAMYVIEEM 547
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 74/333 (22%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L++A ++ +L H M H+ + +L+ ++ DL+ AH+LF +P
Sbjct: 33 NTLIEAHINLSHRKKSLELFHAM----PHKSHYSWNQLVSTFSKSGDLQQAHNLFNAMPM 88
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP---DGYVFPKVLKACAQLAAL-LE 119
N + S++ +SRHG R+ I + EM F + D +V V ACA L L
Sbjct: 89 KNPLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLSTVFGACADLFVLDCG 148
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE------------------------- 154
D +C+S++++Y KCGD++
Sbjct: 149 KQVHARVFIDGFEFKHDKVLCSSIVNLYGKCGDLDIAVWVVGFVMDVDDFSLSALVSGYA 208
Query: 155 ------GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP------- 201
A RVFD + WNS++S YV NG A+++ MR G
Sbjct: 209 NAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRSGVRGEFPAVAN 268
Query: 202 ----------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
D+V +T++DAY + EA ++F+++K +
Sbjct: 269 ILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHSHEACELFDELKVYD 328
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
I T+I+ Y + GR + GIF+ M N ++
Sbjct: 329 AILLNTMITVYCNCGRIEDAKGIFQTMPNKTLI 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 139/347 (40%), Gaps = 74/347 (21%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
F + L+ YA+ + A +F P + SI++ + +G + ++ + +MR
Sbjct: 198 FSLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRS 257
Query: 96 GVSPDGYVFPKVLKACAQLAALL--EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC--- 150
GV + FP V + ++LL E D+ V +++LD YSKC
Sbjct: 258 GVRGE---FPAVANILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHS 314
Query: 151 ----------------------------GDVEGAARVFDEMRERDVFSWNSMMS------ 176
G +E A +F M + + SWNS+++
Sbjct: 315 HEACELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILALDTFSR 374
Query: 177 -------------------CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
C + + L + +V G E D + +++D YC+ G
Sbjct: 375 MNMLDVKMDKFSFASVISACAIKSSL-ELGEQVFGKAITLGLESDQIIYTSLVDFYCKCG 433
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+V KVF+ + + +SW T++ GY++ G +L +F EM G V P A +GVL
Sbjct: 434 IVEMGRKVFDGMIRTDEVSWNTMLMGYATNGYGIEALTLFNEMEYSG-VRPSAITFNGVL 492
Query: 278 VSCRCLGALASGKEI-----HGYGLKIMPGEIFYRSAGAALLTLYAR 319
+C G + G+ + H Y I PG Y + ++ L+AR
Sbjct: 493 SACDHCGLVEEGRNLFRTMKHEY--DINPGIEHY----SCMVDLFAR 533
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
++FDEM + + FSWN+++ ++ ++++E+ +M + N ++ + + G
Sbjct: 19 QLFDEMPQPNPFSWNTLIEAHINLSHRKKSLELFHAMP----HKSHYSWNQLVSTFSKSG 74
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM--VFPDAGALSG 275
+ +A +F + N + W ++I GYS G ++ +F+EM+ D + + DA LS
Sbjct: 75 DLQQAHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLST 134
Query: 276 VLVSCRCLGALASGKEIHG 294
V +C L L GK++H
Sbjct: 135 VFGACADLFVLDCGKQVHA 153
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 12/196 (6%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I+ Y C D+ SA LF ++P N+ +++++ + R+ + +E F+ +
Sbjct: 53 TCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEI-----FEILI 107
Query: 99 PDGYVFPKV--LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC--NSVLDMYSKCGDVE 154
+G V +V + ACA L AL DL V +++DMY++CG+VE
Sbjct: 108 DEGLVANEVGAVSACAHLGAL---AAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVE 164
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A RVF+EM+E+DV SW S++S +G ++ A+E M +G P +T V+ AY
Sbjct: 165 KAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYS 224
Query: 215 RMGLVSEASKVFEQIK 230
GLV + ++FE +K
Sbjct: 225 HGGLVEKGQEIFESMK 240
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 33/178 (18%)
Query: 147 YSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC------- 199
Y KCGDV+ A ++FD M +++ +W++M++ Y+ N +AVE+ E + +G
Sbjct: 59 YFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEVGA 118
Query: 200 -------------------------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+ +V+ ++D Y R G V +A +VFE++K+ +V
Sbjct: 119 VSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDV 178
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
ISWT+LISG + G +L F MV +G+V P + VL + G + G+EI
Sbjct: 179 ISWTSLISGVAMHGYAEEALEYFYVMVKNGIV-PRDITFTAVLKAYSHGGLVEKGQEI 235
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
DV + ++ Y + G V A K+F+++ N+++W+T+I+GY ++ IF ++
Sbjct: 48 DVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILI 107
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++G+V + GA+S +C LGALA+G++ + + ++I G A++ +YAR
Sbjct: 108 DEGLVANEVGAVS----ACAHLGALAAGEKAYEHAIRINLD--LNVILGTAIVDMYAR 159
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 49/359 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ SL +Q H +L + + F TT+LI YA D + +F + N
Sbjct: 32 LLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKN 91
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V+ + S++ + ++ I + +M + + PD Y + K ++ L+
Sbjct: 92 VYLWNSLINGYVKNHQFDNAIVLFRQMG-RCLLPDDYTLATISKVSGEIQDLV-LGKLIH 149
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS-CYV----- 179
D+ V NSV+ MY +C + A +VFDEM +R+V S+N ++S C
Sbjct: 150 GKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLD 209
Query: 180 ---------------CNGLSQRAVEVLESMRV--------------------DGCE---- 200
C G + A V + + +G +
Sbjct: 210 YSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMC 269
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
DV ++++D Y R + + +VF+Q+K N+ WT +I+GY G +L +FREM
Sbjct: 270 SDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREM 329
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ P+ +L VL +C L L GK++H + +K+ + Y S AL+ +YA+
Sbjct: 330 QRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFND--YISLRNALIDMYAK 386
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 12/262 (4%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRK----PFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
C + + ++LH Y++ +G K + LI +Y+ + L + +F Q+ N
Sbjct: 243 CDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRN 302
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ +T+++ + ++G + + EM+ K + P+ VL AC L L+
Sbjct: 303 IYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVH 362
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE-MRERDVFSWNSMMSCYVCNGL 183
+ + N+++DMY+KCG ++ A RVFD +D +W+S++S Y +G
Sbjct: 363 AFSIKMEFNDY-ISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGK 421
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
Q A+ M G +PD++T V+ A CR GLV E ++ + + + I G
Sbjct: 422 GQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICG 481
Query: 244 --YSSVGRHG---VSLGIFREM 260
+GR G +L REM
Sbjct: 482 CVVDLLGRSGQLDQALDFIREM 503
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 57/322 (17%)
Query: 27 LLHGSHRKPFFTTKLI------QIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
L+HG + F + ++ +Y C + A +F ++PQ NV +F I++ + G
Sbjct: 147 LIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALG 206
Query: 81 -----LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
L + M+ +G + D + +L C +
Sbjct: 207 NLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGL-- 264
Query: 136 DLRVCN------SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
DL++C+ S++DMYS+ + + RVFD+M+ R+++ W +M++ YV NG + A+
Sbjct: 265 DLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALI 324
Query: 190 VLESM-RVDGCEPDVVT-----------------------------------RNTVMDAY 213
+ M R D P+ V+ RN ++D Y
Sbjct: 325 LFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMY 384
Query: 214 CRMGLVSEASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
+ G + A +VF+ + I+W+++IS Y G+ +L + EM+ G + PD
Sbjct: 385 AKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQG-IKPDMIT 443
Query: 273 LSGVLVSCRCLGALASGKEIHG 294
+ GVL +C G + G I+
Sbjct: 444 VVGVLSACCRSGLVDEGISIYN 465
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 148/366 (40%), Gaps = 79/366 (21%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA---DCDDLRSAHSLFR 59
+ SLL +C K++ QA Q++ ++++ G H +T L YA L +H+LF
Sbjct: 17 IKSLLSSC---KTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFT 73
Query: 60 QLPQPNVFAFTSILAFHSR-HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ-LAAL 117
Q+ P++F + +I+ +S+ H + + M V PD + FP +LKACA L +
Sbjct: 74 QITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISA 133
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
+ D+ V N++L+ Y GDV A +VFDE RD S+N+M++
Sbjct: 134 PQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMING 193
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPD----------------------------------- 202
+ G V MR PD
Sbjct: 194 FARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFG 253
Query: 203 --VVTRNTVMDAYCRMGLVSEASKVFEQIK------------------------------ 230
V+ N ++D Y + G + A V +K
Sbjct: 254 GNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFD 313
Query: 231 ---DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
+ +V+SWT +ISGYS G +L +F ++ GM PD A+ L +C LGAL
Sbjct: 314 QMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMK-PDEVAVVAALSACARLGALE 372
Query: 288 SGKEIH 293
G+ IH
Sbjct: 373 LGRRIH 378
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 46/286 (16%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
Q+H ++L +G F L+ Y D+ +A+ +F + + +F +++ +R G
Sbjct: 139 QVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKG 198
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXXXXXXXXXXXXXXDLRV 139
C + EMR V PD Y F +L C+ L + ++ +
Sbjct: 199 DVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLL 258
Query: 140 CNSVLDMYSKC---------------------------------GDVEGAARVFDEMRER 166
N ++DMY+KC G+V+ A R+FD+M ER
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGER 318
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
DV SW +M+S Y G Q A+E+ + G +PD V + A R+G + ++
Sbjct: 319 DVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH 378
Query: 227 EQIKDPNVISWT---------TLISGYSSVGRHGVSLGIFREMVND 263
Q N WT ++ Y+ G ++L +FR+ +D
Sbjct: 379 RQYAGEN---WTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDD 421
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T L+ YA +++ A LF Q+ + +V ++T++++ +S G ++ +E + ++ G+
Sbjct: 293 TSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMK 352
Query: 99 PDGYVFPKVLKACAQLAAL-LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
PD L ACA+L AL L + ++V+DMY+KCG ++ A
Sbjct: 353 PDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIAL 412
Query: 158 RVFDEMRE--RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCR 215
VF + + + F +NS++S +G + A + E M + G +PD +T V+ A
Sbjct: 413 DVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGH 472
Query: 216 MGLVSEASKVFEQI 229
GLV K+FE +
Sbjct: 473 CGLVDFGKKLFESM 486
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 16/305 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L+ A S + + + +H Y+L H ++I YA + A +F ++
Sbjct: 345 NLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTR 404
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++TS++ + HG + I + ++ + +S D +L+A +QL L
Sbjct: 405 DLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCL-SFIKEV 463
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL V NS++ Y+KCG + A +F +M ER + SWN+M+ Y +G
Sbjct: 464 HCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNY 523
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF-----EQIKDPNVISWTT 239
+E+ + M+ PD VT +++ A GLV E ++F E PN + ++
Sbjct: 524 TEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSC 583
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFP---DAGALSGVLVSCRCLGALASGKEIHGYG 296
++ S GR RE N P + A+S +L +CR G G+ I
Sbjct: 584 IVDLLSRAGR-------LREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQI 636
Query: 297 LKIMP 301
LK+ P
Sbjct: 637 LKLEP 641
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 156/361 (43%), Gaps = 54/361 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPF------FTTKLIQIYADCDDLRSAHS 56
L SL+ A + ++L + + +H Y + R+ F T L+ +Y C + A S
Sbjct: 138 LVSLMHAAAKLRALREGQAVHGYAV-----RREIGLGDDVFETTLLDMYHKCGGVGLAAS 192
Query: 57 LFRQL---PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+F ++ V ++ +++A + R+G A + E + M + V PD + C +
Sbjct: 193 VFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVE 252
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
L L DL +++D+Y K D+ A ++F+ + +D +N
Sbjct: 253 LN-YLRRGMSIHGYMITMGVELDLVASTALVDLYCKI-DITKARKLFERLGNKDAVVYNV 310
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDV-------------------------VTR-- 206
MM+ Y+ NGL AV V M +V V R
Sbjct: 311 MMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHM 370
Query: 207 --------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
N ++ AY + G V +A +VF +++ +++SWT++I GY G ++ +FR
Sbjct: 371 HITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFR 430
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
+ + + D+ L G+L + LG L+ KE+H + + G+ S +L+T YA
Sbjct: 431 LLQREHLSI-DSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDL--SVNNSLITTYA 487
Query: 319 R 319
+
Sbjct: 488 K 488
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 54/311 (17%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF--HSRHGLARQCIETYAEMR 93
F + LI++Y+ ++ AH +F ++ ++FA+TS++ HS T M+
Sbjct: 68 FVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQ 127
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
+G+ P+ ++ A A+L AL E D ++LDMY KCG V
Sbjct: 128 QQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGV 187
Query: 154 EGAARVFDEMRER---DVFSWNSMMSCYVCNGLSQRAVEVLESMR--------------- 195
AA VF +M R V SWN++++ Y+ NG + A E+ M
Sbjct: 188 GLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAI 247
Query: 196 --------------------VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
G E D+V ++D YC++ +++A K+FE++ + + +
Sbjct: 248 FCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAV 306
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE---- 291
+ +++GY G ++ +FREMV A + V + + AL+ ++
Sbjct: 307 VYNVMMTGYLENGLPVEAVNVFREMVK-------TNASTNVALFLNLISALSKLRDIRLV 359
Query: 292 --IHGYGLKIM 300
IHGY L+ M
Sbjct: 360 RSIHGYVLRHM 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 45/253 (17%)
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD 167
LK C L L E D V +S++ +YS+ G ++ A +VFDE+ +D
Sbjct: 39 LKTCLSLGTL-EFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKD 97
Query: 168 VFSWNSMMSCYVCNGLS--QRAVEVLESMRVDGCEPDVVT-------------------- 205
+F++ SM++ Y +G S A M+ G P+ VT
Sbjct: 98 IFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAV 157
Query: 206 ----------------RNTVMDAYCRMGLVSEASKVFEQI---KDPNVISWTTLISGYSS 246
T++D Y + G V A+ VF ++ K V SW LI+GY
Sbjct: 158 HGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLR 217
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
G+ + +FR M+ V PD L+ + C L L G IHGY I G
Sbjct: 218 NGQALEAFELFRRMMCRN-VLPDLLTLANAIFCCVELNYLRRGMSIHGY--MITMGVELD 274
Query: 307 RSAGAALLTLYAR 319
A AL+ LY +
Sbjct: 275 LVASTALVDLYCK 287
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L+ A +H + + G P +T IY +++ A LF + P+ V A+ ++++
Sbjct: 326 LHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISG 385
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
++++G I + EM +P+ +L ACAQL +L
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL-SFGKWVHHLIKSENLEP 444
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
++ V +++DMY+KCG++ A ++FD M E++ +WN+M+ Y +G A+++ M
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEML 504
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
G P VT +V+ A GLV E ++F +
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNM 538
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
+ T LI +Y+ C D+ +A LFR++ +P++ A+ ++++ + +G ++ + E+ F
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFS 304
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
G ++ + L + V + +Y+K +++
Sbjct: 305 GERVSSSTIVGLIPLHSPFGHL-HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDL 363
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM--------------------- 194
A +FDE E+ V +WN+M+S Y NG ++ A+ + + M
Sbjct: 364 ARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQ 423
Query: 195 --------------RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
+ + EP++ ++D Y + G +SEA ++F+ + + N ++W T+
Sbjct: 424 LGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTM 483
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
I GY G +L ++ EM++ G P A VL +C G + G+EI
Sbjct: 484 IFGYGLHGYGHEALKLYNEMLHLGYN-PSAVTFLSVLYACSHAGLVGEGEEI 534
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 145/352 (41%), Gaps = 43/352 (12%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L + + + Q H +L+G TKL Q D R A +LF +P+
Sbjct: 13 NTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPK 72
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXX 122
P++F F ++ S + I Y +R +SPD + + + AC+ L+
Sbjct: 73 PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---- 128
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V ++++D+Y K V A +VFD M ERD WN+M++ V N
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNC 188
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDA--------------------------YCRM 216
++++ M DG D T V+ A Y
Sbjct: 189 CFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT 248
Query: 217 GLVSEASK---------VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
GL+S SK +F +I P++I++ +ISG+++ G S+ +FRE++ G
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + G++ G L IHG+ +K G I + A +Y +
Sbjct: 309 -SSSTIVGLIPLHSPFGHLHLACSIHGFCVK--SGIILNPTVSTAFTAIYNK 357
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ ++L AC+ SL+ K +HH + + +T L+ +YA C ++ A LF +
Sbjct: 414 ITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ N + +++ + HG + ++ Y EM G +P F VL AC+
Sbjct: 474 EKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSH 524
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 135/325 (41%), Gaps = 41/325 (12%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS--LFRQLPQPNVFAFTS 71
K+ Q + +H + G LI +YA C D+ S+ S LF ++ +V ++ S
Sbjct: 24 KNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNS 83
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXXXXXXXXX 130
I+ +G + + + M F D + AC+ L L
Sbjct: 84 IMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLG 143
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
+ V NS++ +YS+C V+ A VF EM +D+ SWN+MM Y N A ++
Sbjct: 144 YKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDL 203
Query: 191 LESMRVDGC-EPDVVT------------------------------------RNTVMDAY 213
+ M+ GC +PD+VT RN ++D Y
Sbjct: 204 MVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMY 263
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
+ +V +A +F +++SW +ISGYS + + +F+E++ G +
Sbjct: 264 SKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVF 323
Query: 274 SGVLVSCRCLGALASGKEIHGYGLK 298
+ +L SC +L GK +H + LK
Sbjct: 324 A-ILSSCNSANSLNFGKSVHIWQLK 347
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
++L +C+++ SLN K +H + L G L+Q+Y + DL S S+ ++
Sbjct: 324 AILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSI 383
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLEXX 121
++ ++ +I+ R ++ +ET+ MR +G S D VL A A + LL
Sbjct: 384 ADIASWNTIIVGCVRGDQFQEALETFMLMR-QGPSFNYDSITLVNVLSAVANIE-LLNQG 441
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D RV NS++ MY +C D+ A +VF ++ +WN M+S N
Sbjct: 442 KSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHN 501
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV----FEQIKDPNVISW 237
S+ A+E+ ++ +P+ T +V+ A R+G++ +V F N
Sbjct: 502 KESREALELFRHLQF---KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFIS 558
Query: 238 TTLISGYSSVGRHGVSLGIFR 258
L+ YS+ GR ++ +FR
Sbjct: 559 AALVDLYSTCGRLDNAVKVFR 579
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPF-----FTTKLIQIYADCDDLRSAHSL 57
L ++L A + + LNQ K LH L + PF LI +Y C D+ SA +
Sbjct: 425 LVNVLSAVANIELLNQGKSLHSLAL-----KSPFGSDTRVQNSLITMYDRCRDINSARKV 479
Query: 58 FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
F+ N+ + +++ S + +R+ +E + ++FK P+ + VL AC ++ L
Sbjct: 480 FKFHSISNLCTWNCMISALSHNKESREALELFRHLQFK---PNEFTIVSVLSACTRIGVL 536
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
+ + +++D+YS CG ++ A +VF ++ + +WNSM++
Sbjct: 537 IHGKQVHGYTFRYGYQQNSF-ISAALVDLYSTCGRLDNAVKVFRHSQKSES-AWNSMIAA 594
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE 227
Y +G ++A+E+ M G + T +++ A GLV++ + +E
Sbjct: 595 YGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYE 644
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 44/225 (19%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAAR--VFDEMRERDVFSWNSMMS------------CYV-- 179
D+ +CN++++MY+KCGDV + +F+EM +DV SWNS+M CY
Sbjct: 44 DISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRR 103
Query: 180 CNGLSQRAVEVLESMRVDGC-----------------------EPDVVTRNTVMDAYCRM 216
N +RA V S + C V N+++ Y +
Sbjct: 104 MNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQC 163
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
V A VF ++ +++SW ++ GY+S + + EM G PD L+ +
Sbjct: 164 EAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTM 223
Query: 277 LVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
L C L G+ IHGY ++ ++P + R+ L+ +Y++
Sbjct: 224 LPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRN---GLIDMYSK 265
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 138/356 (38%), Gaps = 41/356 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT--TKLIQIYADCDDLRSAHSLFRQ 60
L+ + ACS+ L + +H + G F + LI +Y+ C+ + A ++FR+
Sbjct: 116 LSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFRE 175
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLE 119
+ ++ ++ +++ ++ + + + EM+ G PD +L CA+L E
Sbjct: 176 MAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYRE 235
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
L + N ++DMYSKC VE A +F + D+ SWN+M+S Y
Sbjct: 236 GRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYS 295
Query: 180 CNGLSQRAVEVLESMRVDG--CEPDVVTR------------------------------- 206
N ++A + + + G C V
Sbjct: 296 QNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTL 355
Query: 207 --NTVMDAYCRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N++M Y G L S S + E ++ SW T+I G + +L F M
Sbjct: 356 LVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQG 415
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D+ L VL + + L GK +H LK G +L+T+Y R
Sbjct: 416 PSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSD--TRVQNSLITMYDR 469
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NS++ S +++A L M + + +I YA ++ A +F +
Sbjct: 363 NSMIAGYCQSGRMSEALNLFRQMPV----KNAVSWNTMISGYAQAGEMDRATEIFEAMGV 418
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++ S++ ++GL +++ M +G PD F L +CA LAAL +
Sbjct: 419 RNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAAL-QVGKQ 477
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
DL V N+++ MY+KCG V+ A +VF ++ D+ SWNS++S Y NG
Sbjct: 478 LHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGY 537
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVISWT 238
+ A E M +G PD VT ++ A GL ++ +F+ + +P ++
Sbjct: 538 ANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYS 597
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
L+ +GR + I R M V +AG +L +CR + GK
Sbjct: 598 CLVDLLGRMGRLEEAFNIVRGM----KVKANAGLWGSLLAACRVHKNMELGK 645
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 29/292 (9%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV-SPDGYVFPKV- 107
DL SA LF ++P PN ++ ++L +RHG + + + M K V S + + V
Sbjct: 219 DLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQ 278
Query: 108 ---------------LKACAQLAALLEX-----XXXXXXXXXXXXXXXDLRVCNSVLDMY 147
K C ++ D+ +++
Sbjct: 279 DLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGL 338
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
+ G ++ A++VF ++ +RD WNSM++ Y +G A+ + M V + V+ N
Sbjct: 339 IQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPV----KNAVSWN 394
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++ Y + G + A+++FE + NVISW +LI+G+ G + +L M +G
Sbjct: 395 TMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKK- 453
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD + L SC L AL GK++H LK G I AL+ +YA+
Sbjct: 454 PDQSTFACSLSSCANLAALQVGKQLHELILK--SGYINDLFVSNALIAMYAK 503
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 50/248 (20%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NS++ + + ++ A+QL M S R +I Y + + AH LF + +
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKM----SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAE 107
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ F++ ++ ++R G+ + E + + PD K+ AC
Sbjct: 108 RDNFSWALMITCYTRKGMLEKARELFE------LVPD-----KLDTAC------------ 144
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
N+++ Y+K G + A +VF++M +D+ S+NSM++ Y NG
Sbjct: 145 ----------------WNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGK 188
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
A++ E M E +VV+ N ++ + + A ++FE+I DPN +SW T++ G
Sbjct: 189 MGLAMKFFERM----AERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCG 244
Query: 244 YSSVGRHG 251
++ RHG
Sbjct: 245 FA---RHG 249
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+L N+++ Y VE A ++FD M ERD FSW M++CY G+ ++A E+ E +
Sbjct: 78 NLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELV- 136
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
+ D N ++ Y + G +A KVFE++ +++S+ ++++GY+ G+ G+++
Sbjct: 137 --PDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMK 194
Query: 256 IFREMVNDGMV 266
F M +V
Sbjct: 195 FFERMAERNVV 205
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ +++K G V A ++FD+M +R++ SWN+M++ Y+ N + + A ++ + M E
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM----AE 107
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-NVISWTTLISGYSSVGRHGVSLGIFRE 259
D + ++ Y R G++ +A ++FE + D + W +I+GY+ GR + +F +
Sbjct: 108 RDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEK 167
Query: 260 M 260
M
Sbjct: 168 M 168
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
K G ++ A RVF + ++ ++NSM++ + NG A ++ + M + ++V+ NT
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM----SQRNLVSWNT 84
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
++ Y +V EA K+F+ + + + SW +I+ Y+ G
Sbjct: 85 MIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKG 124
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 36/293 (12%)
Query: 5 SLLQACSASKSLNQ-AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S++ AC S + + A+Q+H Y++ G F T L+ Y + A+ LF ++ +
Sbjct: 253 SMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEE 312
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
PN+ ++TS++ ++ +G ++ + Y +R G+ G V++ C
Sbjct: 313 PNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQI 372
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ V NS++ M+ VE A+RVF+ M+ERD SWNS+++ NG
Sbjct: 373 LGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGR 432
Query: 184 SQRAVEVLESMR-----------------------------------VDGCEPDVVTRNT 208
+ ++ MR G E +V N+
Sbjct: 433 FEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNS 492
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
++ Y + G +A VF + ++ISW ++++ + G++ ++ + EM+
Sbjct: 493 LLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEML 545
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 130/316 (41%), Gaps = 41/316 (12%)
Query: 17 NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFH 76
N K LH + + F+T L+ +Y+ ++ A +F ++ N ++ ++++
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
R G + ++ + M GV+P YV ++ AC + + E +
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSN 283
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
+ V S+L Y G V A ++F+E+ E ++ SW S+M CY NG ++ + + +R
Sbjct: 284 VFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRH 343
Query: 197 DGC------------------------------------EPDVVTRNTVMDAYCRMGLVS 220
+G V N+++ + V
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVE 403
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP--DAGALSGVLV 278
EAS+VF +++ + ISW ++I+ + GR SLG F M P D +S +L
Sbjct: 404 EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR---THPKTDYITISALLP 460
Query: 279 SCRCLGALASGKEIHG 294
+C L G+ +HG
Sbjct: 461 ACGSAQHLKWGRGLHG 476
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 9/292 (3%)
Query: 5 SLLQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+LL C S L +H ++++ G + + LI +YA C DL ++ +F L
Sbjct: 656 NLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLAN 715
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N + +I + ++ +G + ++ A MR GV D + F L L +L+
Sbjct: 716 KNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLT-VLDEGQQ 774
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V N+ +DMY KCG+++ R+ + R SWN ++S +G
Sbjct: 775 LHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGF 834
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTT 239
++A E M G +PD VT +++ A GLV E F + P I
Sbjct: 835 FRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCV 894
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
I +GR G L ++ V P+ +L +C+ G L G++
Sbjct: 895 CI--IDLLGRSG-RLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRK 943
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 37/194 (19%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N++++MYSK G ++ A VFD+M +R+ SWN+M+S +V G +A++ M +G
Sbjct: 186 NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVT 245
Query: 201 P------------------------------------DVVTRNTVMDAYCRMGLVSEASK 224
P +V +++ Y G VSEA+K
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+FE+I++PN++SWT+L+ Y+ G L I+R + ++G++ ++ V+ +C G
Sbjct: 306 LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICT-GNTMATVIRTCGMFG 364
Query: 285 ALASGKEIHGYGLK 298
G +I G +K
Sbjct: 365 DKTMGYQILGDVIK 378
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 45/316 (14%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI ++ + D + A +F + + + ++ SI+ + +G + + + MR D
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTD 451
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+L AC A L+ ++ VCNS+L MY++ G E A VF
Sbjct: 452 YITISALLPACGS-AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVF 510
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRA----VEVLESMR----------VDGC------- 199
M RD+ SWNSMM+ +V +G A VE+L++ + + C
Sbjct: 511 HTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLK 570
Query: 200 -----------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
+++ NT++ Y + GL+ EA KV + + + +V++W LI G++
Sbjct: 571 IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDK 630
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-----MPGE 303
++ F M +G+ LS + LG S + +G+ I + G
Sbjct: 631 DPNATIQAFNLMRREGL-------LSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGF 683
Query: 304 IFYRSAGAALLTLYAR 319
++L+T+YA+
Sbjct: 684 ELDTYVQSSLITMYAQ 699
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 131/333 (39%), Gaps = 41/333 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++LL AC +++ L + LH + G L+ +YA A +F +P
Sbjct: 455 ISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++ S++A H G I EM + + F L AC LE
Sbjct: 515 ARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN----LEKLK 570
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L + N+++ MY K G ++ A +V M ERDV +WN+++ + +
Sbjct: 571 IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDK 630
Query: 183 LSQRAVEVLESMR------------------------------------VDGCEPDVVTR 206
++ MR V G E D +
Sbjct: 631 DPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQ 690
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++++ Y + G ++ +S +F+ + + N +W + S + G +L M NDG V
Sbjct: 691 SSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDG-V 749
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
D + S L + L L G+++H + +K+
Sbjct: 750 DLDQFSFSVALATIGNLTVLDEGQQLHSWIIKL 782
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 50/322 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQ 60
L SLL C KS+ + K+LH + +G + F K++ A + D+ ++ +F Q
Sbjct: 17 LLSLLDKC---KSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQ 73
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ P +F++ I+ +S + + +M GV+PD +P ++KA A+L+ +
Sbjct: 74 ISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQ-KS 132
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D + NS++ MY+ CG++ A +VF+ M+ +++ SWNSM+ Y
Sbjct: 133 GVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
G A +V ESM+ E DV + ++ +D Y + G EA VFE+++
Sbjct: 193 CGEMAMAQKVFESMQ----ERDVRSWSSFIDGYVKAGEYREAMAVFEKMR---------- 238
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS--GVLVSCRCLGALASGKEIHGYGL- 297
+VG P A ++ VL +C LGAL G+ +H Y +
Sbjct: 239 -----AVG-------------------PKANEVTMVSVLSACAHLGALQKGRMMHQYIID 274
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
++P + ++ +L+ +YA+
Sbjct: 275 NLLPMTMVLQT---SLVDMYAK 293
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 45 YADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF 104
YA C ++ A +F + + +V +++S + + + G R+ + + +MR G +
Sbjct: 190 YAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
VL ACA L AL + + + S++DMY+KCG +E A VF +
Sbjct: 250 VSVLSACAHLGAL-QKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGIS 308
Query: 165 --ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
+ DVF WN+M+ +GL + ++++ + M++ G D +T ++ A GLV EA
Sbjct: 309 KSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEA 368
Query: 223 SKVFEQI 229
FE +
Sbjct: 369 WNFFESL 375
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL--P 62
S+L AC+ +L + + +H Y++ + T L+ +YA C + A +FR +
Sbjct: 251 SVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKS 310
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
Q +VF + +++ + HGL + ++ + EM+ G+ D + +L ACA
Sbjct: 311 QTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAH 361
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 141/340 (41%), Gaps = 49/340 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+SLL+ C K+ + Q H LL T L+ Y + A LF ++P
Sbjct: 6 LSSLLRTC---KTHSTVSQCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMP 62
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q N+ ++ ++A ++ + + + + + GV PD Y P + K ++
Sbjct: 63 QRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWM 122
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF-DEMRERDVFSWNSMMSCYVCN 181
+ V NSVL+ Y KCG + A VF + RD +WN M+S +
Sbjct: 123 CHGLVVKLGYEEI-VVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKA 181
Query: 182 GLSQRAVEVLESM--------------------------------------RVDGCEPDV 203
GL AV M R G + D
Sbjct: 182 GLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADA 241
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++D Y + G + ++ +F+ + N+++WTT+IS Y G+ S+ +F +M+++
Sbjct: 242 PIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDE 301
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHG-----YGLK 298
G P+A L+ +L SC G L GK+I G YGL+
Sbjct: 302 GFR-PNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLE 340
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 8/244 (3%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFA-FTSILAFHSRHGLARQCIETYAEM-RFK 95
+++ Y C + A S+F P A + +++ + GL + + + EM +++
Sbjct: 139 NNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYR 198
Query: 96 -GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G+ D P +L AC + LL+ D + N+++D Y KCG ++
Sbjct: 199 NGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLK 258
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
+ +F + ++ +W +M+SCY +G Q +V + E M +G P+ VT ++ +
Sbjct: 259 DSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCS 318
Query: 215 RMGLVSEASKVF-EQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
GL+ + K+F I D P + ++ +S GR +L + M + +
Sbjct: 319 HCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSM 378
Query: 270 AGAL 273
GAL
Sbjct: 379 WGAL 382
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLH-GSHRKPFFTTKLIQIYADCDDLRSAHSLFR 59
M L S+L AC L + K++H +++ + G LI Y C L+ + ++F+
Sbjct: 206 MTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFK 265
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ N+ +T++++ + HG ++ + + +M +G P+ +L +C+ L +
Sbjct: 266 TVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQ 325
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS--WNSMMS 176
++D++S+CG +E A ++ + M+ V W ++++
Sbjct: 326 GKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLA 384
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 146/354 (41%), Gaps = 77/354 (21%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC----------DDL- 51
+SL+ C ++KSL K LH ++ + F LI +Y+ C DDL
Sbjct: 14 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 73
Query: 52 --------------------RSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
A+ LF ++PQ N+ ++ S+++ +RH ++ ++ + E
Sbjct: 74 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 133
Query: 92 MR--FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
M+ G+ D + ++ C+ L + + +L + N+++D Y K
Sbjct: 134 MQNGVGGLMLDEFTLVSLVSNCSCLDTV-KWLRQVHGVATIVGFRTNLILNNALIDAYGK 192
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
CG+ + +F M E+D SW SM VVT
Sbjct: 193 CGEPNSSFCLFRSMVEKDAVSWTSM----------------------------VVT---- 220
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y R + +A KVF ++ +SW LISG+ GR +L +F +M+ +G V P
Sbjct: 221 ---YTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEG-VLPR 276
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPG----EIFYRSAGAALLTLYAR 319
A VL +C + GK++H +I+ G +F AL+ +YA+
Sbjct: 277 AQTFVSVLDACASEALIGRGKQVH---CQIIRGRSSDNLFNVYVFNALMDMYAK 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SL+ CS ++ +Q+H + G LI Y C + S+ LFR +
Sbjct: 148 LVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMV 207
Query: 63 QPNVFAFTSILAFHSR-------------------------------HGLARQCIETYAE 91
+ + ++TS++ ++R +G + +E + +
Sbjct: 208 EKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQ 267
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXX--XXXXXXXXXXXXDLRVCNSVLDMYSK 149
M +GV P F VL ACA A + ++ V N+++DMY+K
Sbjct: 268 MIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAK 327
Query: 150 CGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
CGD++ A +F+ M +DV SWN++++ + NG + ++ V + M EP+ VT
Sbjct: 328 CGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLG 387
Query: 209 VMDAYCRMGLVSEASKVFEQIK 230
V+ A GLV+ ++ + ++
Sbjct: 388 VLSACNHAGLVNAGLELLDSME 409
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 50/308 (16%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQ-CIETYAEM---RFKGVSPDGYVFPKVLKACA 112
+ R + PN F + ++ +S+ L +Q I Y + + + PD + +P VLKACA
Sbjct: 37 ILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACA 96
Query: 113 QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSW 171
L +L E D +CNS++ Y+ CG +E A +VFD M E R+V SW
Sbjct: 97 YLFSLFE-GKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 172 NSMMSCY--------------------------------VCNGLSQRAVEV-LESMRVDG 198
N M+ Y C GL ++ + + + +
Sbjct: 156 NVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKK 215
Query: 199 CEP----DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
C+ DV+ ++D YC+ G + A +VFE + +V SW ++I G++ G+ +L
Sbjct: 216 CDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAAL 275
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK---EIHGYGLKIMPGEIFYRSAGA 311
F MV + P++ GVL +C G + G E+ + P + Y
Sbjct: 276 DYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHY----G 331
Query: 312 ALLTLYAR 319
L+ LYAR
Sbjct: 332 CLVDLYAR 339
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 14/284 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF-RQLPQP 64
+L+AC+ SL + KQ+H ++L G + LI YA C L +A +F R
Sbjct: 91 VLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWR 150
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++ ++ +++ G + + EM K PD Y V++AC L +L
Sbjct: 151 NVVSWNVMIDSYAKVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVH 209
Query: 125 XXXXXX--XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V ++DMY KCG +E A +VF+ M RDV SWNS++ + +G
Sbjct: 210 AFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHG 269
Query: 183 LSQRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVIS 236
++ A++ M +V+ P+ +T V+ A G+V E FE + +P+++
Sbjct: 270 KAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVH 329
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ L+ Y+ G +L + EM + PDA +L +C
Sbjct: 330 YGCLVDLYARAGHIQEALNVVSEMP----IKPDAVIWRSLLDAC 369
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS-AHSLFRQLP 62
+SLL A S+ SL+ +Q H +++ G + L+ +Y C + + A +FR++
Sbjct: 323 SSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREIT 382
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PNV +TS++A + L + +AEM+ GV P+ + +L AC++ +L+
Sbjct: 383 SPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVP-TM 440
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V N+++D Y+ G ++ A V M RD ++ + + G
Sbjct: 441 MLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKG 500
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
A++VL M DG + D + N
Sbjct: 501 HHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSN 560
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + G + +A++ F+ I +P+ SW LISG+S G +L F +M G V
Sbjct: 561 SLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAG-VK 619
Query: 268 PDAGALSGVLVSCRCLGALASGKE 291
PD+ L ++ +C G L G E
Sbjct: 620 PDSITLLSLISACSHGGLLELGLE 643
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 41/334 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD--DLRSAHSLFRQ 60
L+S L++C A + Q+H + G F T L++ Y C + + L
Sbjct: 118 LSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLV 177
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+V ++T++L+ +G + E Y +M GV P+ + F K+L A + L
Sbjct: 178 KDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGL-SY 236
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+L + +V+DMYSKC + A +V + E DV+ W +++S +
Sbjct: 237 GKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQ 296
Query: 181 NGLSQRAVEVLESMRVDGCEP-----------------------------------DVVT 205
N + A+ V M + G P D+
Sbjct: 297 NLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYI 356
Query: 206 RNTVMDAYCRMG-LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
N ++D Y + + + A KVF +I PNV+ WT+LI+G++ R S +F EM G
Sbjct: 357 GNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE-KRLEDSFQLFAEMQAAG 415
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
V P++ +S +L +C +L +HG+ +K
Sbjct: 416 -VRPNSFTMSAILGACSKTRSLVPTMMLHGHIIK 448
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 10/306 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++++L ACS ++SL LH +++ L+ YA + A S+ +
Sbjct: 423 MSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMN 482
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +T + A ++ G ++ M G+ D + L A A L + E
Sbjct: 483 LRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTM-ETGK 541
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V NS++ +YSKCG + A R F ++ E D FSWN ++S + NG
Sbjct: 542 QLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNG 601
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
L A+ + MR+ G +PD +T +++ A GL+ + F ++ P + +
Sbjct: 602 LISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHY 661
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
L+ GR ++G+ +M PD+ +L +C G +A G+++ L
Sbjct: 662 MCLVDLLGRGGRLEEAMGVIEKMSFK----PDSLICKTLLNACNLHGNVALGEDMARRCL 717
Query: 298 KIMPGE 303
++ P +
Sbjct: 718 ELDPSD 723
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 43/345 (12%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
S SL + +H ++ G + T L+ +YA + A LF ++P +V ++T+I
Sbjct: 27 SNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTI 86
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
L+ H++ ++ + M G P+ + L++C L E
Sbjct: 87 LSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGE-FERGMQIHCSAVKLG 145
Query: 133 XXXDLRVCNSVLDMYSKCG--DVEGAARVFDEMRE-RDVFSWNSMMSCYVCNGLSQRAVE 189
+ V S+++ Y+KCG VE A ++ +++ DV SW +M+S V NG A E
Sbjct: 146 LEMNRFVGTSLVEFYTKCGCCSVE-AWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFE 204
Query: 190 VLESMRVDGCEP-----------------------------------DVVTRNTVMDAYC 214
+ M G P ++V + V+D Y
Sbjct: 205 IYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYS 264
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
+ + +A KV + +V WTTLISG++ + ++ +FR+M G++ P+ S
Sbjct: 265 KCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL-PNNFTYS 323
Query: 275 GVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+L + + +L G++ H + + + Y G AL+ +Y +
Sbjct: 324 SLLNASSSILSLDLGEQFHSRVIIVGLEDDLY--IGNALVDMYMK 366
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ--LP 62
+LL A S ++L KQ H Y++ G + + LI +YA +R+A LF Q
Sbjct: 431 ALLSAASNLRNLYVGKQTHAYLIRRGIQFEGM-ESYLIDMYAKSGSIRTAELLFEQNCSS 489
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +I+A ++++GL + I +M + V P+ +L AC+ + ++
Sbjct: 490 DRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSM-GLAR 548
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V S+ D YSKCG + A VF E++ ++ +MM CY +G
Sbjct: 549 QLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHG 608
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
+ +RA+ + +SM G PD VT ++ A GLV E ++FE ++ P++ +
Sbjct: 609 MGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHY 668
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ VGR + + + D G+L G SCR G GK +
Sbjct: 669 CCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLG---SCRNHGHFELGKAV 720
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 39/217 (17%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ N+V+ MYS+C V+ + +VFD+M ERD SWN+++S +V NG + A+ ++ M+
Sbjct: 362 ILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQK 421
Query: 199 CEPDVVT-----------RNT-----------------------VMDAYCRMGLVSEASK 224
D VT RN ++D Y + G + A
Sbjct: 422 FLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAEL 481
Query: 225 VFEQ--IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
+FEQ D + +W +I+GY+ G + ++ + ++M+ V P+A L+ +L +C
Sbjct: 482 LFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQN-VIPNAVTLASILPACSS 540
Query: 283 LGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+G++ +++HG+ ++ + Y G +L Y++
Sbjct: 541 MGSMGLARQLHGFSIRRFLEKNVY--VGTSLTDTYSK 575
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 145/360 (40%), Gaps = 50/360 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKP----FFTTKLIQIYADCDDLRSAHSLF 58
+S L+AC+ +K + K +H + L S+ L+ +YA C A ++F
Sbjct: 120 FSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVF 178
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA-AL 117
+ + NV A+ +++ + Q +E +A M + V P F + A ++L +
Sbjct: 179 DVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSR 238
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
D+ V +S + M+S G ++ A VFD ++ WN+M+
Sbjct: 239 TVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVA 298
Query: 178 YVCNGLSQRAVEV----LESMRVDGCEPDV------------------------------ 203
YV N A++V LES +G DV
Sbjct: 299 YVQNNCPVEAIDVFIQALESE--EGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLP 356
Query: 204 ----VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+ N VM Y R V + KVF+++ + + +SW T+IS + G +L + E
Sbjct: 357 GSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCE 416
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
M + D+ + +L + L L GK+ H Y ++ I + + L+ +YA+
Sbjct: 417 MQKQKFLI-DSVTATALLSAASNLRNLYVGKQTHAYLIR---RGIQFEGMESYLIDMYAK 472
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 117/305 (38%), Gaps = 45/305 (14%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV--SPDGYVFPKVLKACAQL 114
L LP+P+ + S++ + L Q + YA+MR + D Y F LKACA
Sbjct: 71 LLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALT 130
Query: 115 AALLEXXXXXX---XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
+L V NS+L+MY+ C E A VFD MR R+V +W
Sbjct: 131 KDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAW 189
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG-------------- 217
N+++ +V +AVE +M P VT + A ++G
Sbjct: 190 NTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRK 249
Query: 218 ----LVSE-------------------ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
VS+ A VF++ + N W T+I Y ++
Sbjct: 250 FGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAI 309
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
+F + + D L VL + L + ++ H + +K +PG + A++
Sbjct: 310 DVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLII--ILNAVM 367
Query: 315 TLYAR 319
+Y+R
Sbjct: 368 VMYSR 372
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L ACS+ S+ A+QLH + + + + T L Y+ C + A ++F + P
Sbjct: 531 LASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTP 590
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
+ N +T+++ + +HG+ ++ + Y M G+ PD F +L AC
Sbjct: 591 EKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSAC 639
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 124/295 (42%), Gaps = 43/295 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+SL+ C KS+NQ KQ H ++ P K ++ A L AH LF Q+P
Sbjct: 15 LSSLIDLC---KSINQIKQTHANLITTAQITLPVIANKFLKNVA-LASLTYAHKLFDQIP 70
Query: 63 QPNVFAFTSILAFHSR--HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
QP++F + +++ HS H + +R G P+ Y F AC + E
Sbjct: 71 QPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREG 130
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ V N+++ M+ K G VE A VFD +RD +SWN+M+ YV
Sbjct: 131 EQVFTHAVKVGLDG-NVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVG 189
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
+G A E+ + M E DVV+ +T++ Y ++G EA
Sbjct: 190 SGNMVLAKELFDEMH----ERDVVSWSTIIAGYVQVGCFMEA------------------ 227
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
L F +M+ V P+ + L +C L AL GK IH Y
Sbjct: 228 -------------LDFFHKMLQSE-VKPNEYTMVSALAACSNLVALDQGKWIHVY 268
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 11/278 (3%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
R + +I Y ++ A LF ++ + +V ++++I+A + + G + ++ + +M
Sbjct: 175 RDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKM 234
Query: 93 RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
V P+ Y L AC+ L AL + D R+ S++DMY+KCG+
Sbjct: 235 LQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMND-RLLASLIDMYAKCGE 293
Query: 153 VEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
++ A+ VF E + +R V+ WN+M+ + +G + A+ V E M+V+ P+ VT +++
Sbjct: 294 IDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLN 353
Query: 212 AYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
A +V E FE + +P + + ++ S G L EM+ +
Sbjct: 354 ACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGH----LKDSEEMILSMPM 409
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
PD +L +CR + G I +I P I
Sbjct: 410 APDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHI 447
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 14/254 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-Q 63
S L ACS +L+Q K +H Y+ LI +YA C ++ SA S+F + +
Sbjct: 248 SALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVK 307
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
V+ + +++ + HG + I + +M+ + VSP+ F +L AC+ + E
Sbjct: 308 RKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSY 367
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMM-SCYVCN 181
++ ++D+ S+ G ++ + + M DV W +++ +C +
Sbjct: 368 FELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYK 427
Query: 182 GLSQ--RAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNVISWT 238
+ + R +++ + +P+ + N ++ + Y G +EA V E+ + S
Sbjct: 428 DMERGYRIGRIIKEI-----DPNHIGCNVLLGNIYSTSGRWNEARMVREK---NEINSDR 479
Query: 239 TLISGYSSVGRHGV 252
I G+SS+ +GV
Sbjct: 480 KKIPGFSSIELNGV 493
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 7/283 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L + +N+ K++H Y + +G F + LI +YA C+ L + F LP
Sbjct: 230 LSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP 289
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + ++ SI+A ++G + + + M + V P F V+ ACA L AL
Sbjct: 290 RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQ 349
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ + +S++DMY+KCG+++ A VFD + +RD+ +W +++ +G
Sbjct: 350 LHGCIVRLGFDDNEF-IASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHG 408
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ AV + E+M DG P V V+ A GLV E + F ++ I+ +
Sbjct: 409 HALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIA--PGLE 466
Query: 243 GYSSV----GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
Y++V GR G + + N V P S +L +CR
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACR 509
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 59/336 (17%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF---RQLPQPNVFAF 69
S S QAKQLH +++ + + ++ + + HSL P A+
Sbjct: 22 SVSTRQAKQLHAHIV---KTKGTLHSDNILVLSLYSNLNLLQHSLHLFNSLPSPPPPLAW 78
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+SI+ ++ H L ++ MR V P+ +VFP +LKA + L +
Sbjct: 79 SSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKA-STLLKHHKLAHSLHACTV 137
Query: 130 XXXXXXDLRVCNSVLDMYSKCGD---------------VEGAARVFDEMRERDVFSWNSM 174
DL + N++++ Y+K + ++ +VFD M RDV SWN++
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 175 MSCYVCNGLSQRAVEVLESMRVDG-CEPDVVT-------------------------RN- 207
++ + NG+ A++++ M +G +PD T RN
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 208 ---------TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
+++D Y + + + + F + + ISW ++I+G G LG FR
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
M+ + V P A + S V+ +C L AL+ G+++HG
Sbjct: 318 RMLKEN-VKPMAVSFSSVIPACAHLTALSLGRQLHG 352
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 14/266 (5%)
Query: 45 YADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG----VSPD 100
Y ++ A +LFR++ N+ + SI+ + G A++ +E + EM+F V PD
Sbjct: 205 YLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPD 264
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
VL ACA L ++ + D+ + ++++MY KCGDV+ A +F
Sbjct: 265 KITIASVLSACALLGSI-DHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIF 323
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
++M E+D +W +M+S + +G ++A + M G +P+ VT ++ A GLV
Sbjct: 324 NDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVE 383
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
+ F+ +K +P + + ++ S +L + R M + PD
Sbjct: 384 QGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMP----MKPDVYVWGA 439
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMP 301
+L C+ G + G+++ Y + + P
Sbjct: 440 LLGGCQMHGNIKLGEKVAHYLIDLEP 465
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYML----LHGSHRKPFFTTKLIQI-YADCDDLRSAHSL 57
L++L++ C K+L + K +H ++L LH + FT L +++ A+++
Sbjct: 22 LSTLIEQC---KNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNV 78
Query: 58 FRQLPQPNVFAFTSILAFHS--RHGLARQC----IETYAEMRFKGVSPDGYVFPKVLKAC 111
F + P + + ++ + G C + Y +M KG+ P+ FP ++K C
Sbjct: 79 FHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGC 138
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
++L D+ V NS++ ++ G + A +VFDEM RDV SW
Sbjct: 139 SRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSW 198
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
NSM+ Y+ NG + A+ + M +++T N+++ + G E+ ++F +++
Sbjct: 199 NSMVVGYLRNGEVEMALNLFRKMN----GRNIITWNSIITGLVQAGHAKESLEIFHEMQ- 253
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+SG D +V PD ++ VL +C LG++ GK
Sbjct: 254 --------FLSG-------------------DDVVKPDKITIASVLSACALLGSIDHGKW 286
Query: 292 IHGY 295
+H Y
Sbjct: 287 VHAY 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC+ S++ K +H Y+ + T L+ +Y C D++ A +F +P+
Sbjct: 270 SVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEK 329
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ A+T++++ + HG ++ + + EM GV P+ F +L AC+
Sbjct: 330 DASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSH 378
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 134/316 (42%), Gaps = 60/316 (18%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDL----RSAHSLFRQLPQP-NVFAFTSILAF 75
+LH ++ G H+ P L + C + R A ++ +LP P + F++ +I+
Sbjct: 6 KLHATLIKTGQHQNPH---SLRPFFLTCSNYPAAARYAATVLLRLPTPPDPFSYNTII-- 60
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+H I ++ M V D + FP +LK
Sbjct: 61 --KHVSPTGAISLFSHMHRNSVPFDHFTFPLILKHHHHHLL--------HSLIFKLGFDT 110
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
++ V N++++ Y G ++ A ++FDEMR RD+ SW++++SC V N L A+ V + M+
Sbjct: 111 NIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQ 170
Query: 196 VD---------------------------------------GCEPDVVTRNTVMDAYCRM 216
+ G V +++ Y R
Sbjct: 171 MGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRC 230
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
GL+ + KVF+++ + NV++WT LI+G + GR +L +F EM G+ PD GV
Sbjct: 231 GLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLK-PDGALFIGV 289
Query: 277 LVSCRCLGALASGKEI 292
LV+C G + G +
Sbjct: 290 LVACSHGGLVEDGWRV 305
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
F LI Y L A LF ++ + ++ +++++++ ++ L + + + +M+
Sbjct: 113 FVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMG 172
Query: 96 GVSP----DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
D + V+ A + L ++E + + ++++MYS+CG
Sbjct: 173 HRDIRNWLDRAIMLSVISAVSSLG-VIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCG 231
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
++ + +VFDEM ER+V +W ++++ +G S+ A++V M+ G +PD V+
Sbjct: 232 LIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLV 291
Query: 212 AYCRMGLVSEASKVFEQIKD 231
A GLV + +VFE ++D
Sbjct: 292 ACSHGGLVEDGWRVFESMRD 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
G + ++ +N +++AY G + A K+F++++ +++SW+TLIS +L +F
Sbjct: 107 GFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVF 166
Query: 258 REMV---NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
++M D + D + V+ + LG + G +H + +++ G + G AL+
Sbjct: 167 QQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRM--GIVMTVPLGTALI 224
Query: 315 TLYAR 319
+Y+R
Sbjct: 225 NMYSR 229
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 141/326 (43%), Gaps = 38/326 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L+ C+ ++ K +H Y + T L+ +Y + A +LF ++
Sbjct: 403 LSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ 462
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ + +++ +++G +E + ++ G+ PD + ACA + L+
Sbjct: 463 IKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDD-LDLGT 521
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCN 181
D+ V +++DMY+KCG + R+F + +D SWN M++ Y+ N
Sbjct: 522 CLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHN 581
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
G S A+ M+++ P++VT
Sbjct: 582 GYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIG 641
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N+++D Y + G + + K F ++++ + ISW ++S Y+ G+ +++ +F M + V
Sbjct: 642 NSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVM-QESNV 700
Query: 267 FPDAGALSGVLVSCRCLGALASGKEI 292
D+ + VL +CR G + G +I
Sbjct: 701 RVDSVSYISVLSACRHSGLIQEGWDI 726
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 11/302 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-P 64
L AC+ L+ LH + G L+ +YA C L S LF
Sbjct: 507 LFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVK 566
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++A + +G + + I T+ M+ + V P+ F +L A + L+ L E
Sbjct: 567 DEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFH 626
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L + NS++DMY+KCG + + + F EM +D SWN+M+S Y +G
Sbjct: 627 TCIIRMGFLSCTL-IGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQG 685
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVISWTT 239
+ AV + M+ D V+ +V+ A GL+ E +F + +P++ +
Sbjct: 686 ELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYAC 745
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ G L + +M + PDA +L +C+ + G+ + LK+
Sbjct: 746 MVDLLGCAGLFDEVLSLLNKMTTE----PDARVWGALLAACKIHSNVTLGEVAVHHLLKL 801
Query: 300 MP 301
P
Sbjct: 802 EP 803
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 47/337 (13%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M L S+ SK N H + + ++ + KLI + L H+ F Q
Sbjct: 1 MRLKSMKIKLFTSKHSNSLHTHHIFPIQQQNNNNHYL--KLINSCKYINPLLQIHTHFLQ 58
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ P++ + S + +S+ + I Y + G+ PD + F VLKAC A
Sbjct: 59 IKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTS-ALDFHE 117
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ + S++DM+ K G ++ A VFD+M +D WN+M+S
Sbjct: 118 GVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMIS---- 173
Query: 181 NGLSQ-----RAVEVLESMRVDGCEPDVVT------------------------------ 205
GLSQ A+E+ M+++G E D V+
Sbjct: 174 -GLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSIC 232
Query: 206 ---RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
N+++D YC+ G V A +VF+++ + +SW T+++GY G + L + +M
Sbjct: 233 GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM-R 291
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
G V + A+ L+ + L GKEI+ Y L++
Sbjct: 292 RGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQM 328
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV 97
+ LI +Y C D+ SA +F ++ + ++ +++A + ++G + ++ +MR V
Sbjct: 236 SNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNV 295
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
+ L A++ L E D+ V ++ MY+KCG+++ A
Sbjct: 296 KMNKVAVVNALLVVAEMRDL-EKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKAR 354
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------------- 202
+F + RD+ +W++ +S V G + + + + M+ +G +PD
Sbjct: 355 ELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEIS 414
Query: 203 --------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ T++ Y R L + A +F +++ +++ W TLI+
Sbjct: 415 NIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLIN 474
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
G++ G ++L +F + G + PD+G + G+ +C + L G +HG
Sbjct: 475 GFTKYGDPHLALEMFNRLQLSG-ILPDSGTMVGLFSACAIMDDLDLGTCLHG 525
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 143/344 (41%), Gaps = 44/344 (12%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
+ L + K++++Y L G T ++ +YA C +L+ A LF L ++ A+++ L
Sbjct: 313 RDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFL 372
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
+ G R+ + + M+++G+ PD + ++ C +++ +
Sbjct: 373 SALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISN-IGLGKIMHCYAIKADM 431
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D+ + +++ MY + A +F+ M+ +D+ WN++++ + G A+E+
Sbjct: 432 ESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNR 491
Query: 194 MRVDGCEP-----------------------------------DVVTRNTVMDAYCRMGL 218
+++ G P D+ + +MD Y + G
Sbjct: 492 LQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGS 551
Query: 219 VSEASKVF---EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
+ ++F + +KD +SW +I+GY G ++ FR M + V P+
Sbjct: 552 LCSVERLFLLTKHVKDE--VSWNVMIAGYLHNGYSNEAISTFRRMKLEN-VRPNLVTFVT 608
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+L + L L H +++ G + G +L+ +YA+
Sbjct: 609 ILPAVSYLSILREAMAFHTCIIRM--GFLSCTLIGNSLIDMYAK 650
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 22/255 (8%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L A S L +A H ++ G LI +YA C LR + F ++
Sbjct: 608 TILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENK 667
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++L+ ++ HG + ++ M+ V D + VL AC + E
Sbjct: 668 DTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIF 727
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM--------RERDVFSWNSMM- 175
++ Y+ D+ G A +FDE+ E D W +++
Sbjct: 728 ASMCEKHHVEPS-------MEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLA 780
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
+C + + ++ V V ++++ P V + D Y + G ++A + I + +
Sbjct: 781 ACKIHSNVTLGEVAVHHLLKLEPRNP--VHHVVLSDIYAQCGRWNDARRTRSHINNHGLK 838
Query: 236 SWTTLISGYSSVGRH 250
I GYS VG H
Sbjct: 839 K----IPGYSWVGAH 849
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 46/329 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC-------DDLRSAH 55
++L AC+ S + + Q H ++ G F + L+ +Y+ C L S H
Sbjct: 124 FTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEH 183
Query: 56 SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
+ F + S+L G + +E M +GV D + V+ C Q+
Sbjct: 184 GNIDN--DNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIR 241
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
L D+ V + ++DM+ KCGDV A +VFD ++ R+V W S+M
Sbjct: 242 DL-GLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLM 300
Query: 176 SCYVCNGLSQRAVEVLESM---------------------------------RVD--GCE 200
+ Y+ NG + + +L M RV+ G +
Sbjct: 301 TAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIK 360
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
V+ N +++ Y + G + + VF +++ ++I+W +I GYS G +L +F++M
Sbjct: 361 NRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDM 420
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASG 289
++ G P+ GVL +C L + G
Sbjct: 421 LSAGEC-PNHVTFVGVLSACAHLALVNEG 448
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ C + L Q+H +L G F + L+ ++ C D+ SA +F L
Sbjct: 232 SVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR 291
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV +TS++ + ++G + + + M +G + + F +L A A +AAL
Sbjct: 292 NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAAL-RHGDLL 350
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N++++MYSKCG ++ + VF +MR RD+ +WN+M+ Y +GL
Sbjct: 351 HARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLG 410
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
++A+ + + M G P+ VT V+ A + LV+E Q+
Sbjct: 411 KQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQL 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 148/356 (41%), Gaps = 54/356 (15%)
Query: 13 SKSLNQAKQLHHYMLL------HGSHRKPFFT--TKLIQIYADCDDLRSAHSLFRQLPQP 64
+K+LN K +H +L+ H S+R+ LI +Y C LR A LF ++
Sbjct: 25 TKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLR 84
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ ++ + G + ++ + M P+ YVF VL ACA + E
Sbjct: 85 SVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCH 144
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-----RERDVFSWNSMMSCYV 179
V +S++ MYSKC V+ A +V + + D F +NS+++ V
Sbjct: 145 GFLFKFGLVFHHF-VKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALV 203
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVM----------------------------- 210
+G AVEVL M +G D VT +VM
Sbjct: 204 ESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVF 263
Query: 211 ------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
D + + G V A KVF+ +++ NV+ WT+L++ Y G +L + M +G
Sbjct: 264 VGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREG 323
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ + +L + + AL G +H K+ + + G AL+ +Y++
Sbjct: 324 -TMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVI---VGNALINMYSK 375
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 12/267 (4%)
Query: 31 SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR-HGLARQCIETY 89
S + +T LI Y + A +FR+ +V F +++ +S+ A + +E Y
Sbjct: 204 SEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVY 263
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
+M+ P+ F ++ AC+ LAA E +++ ++++DMYSK
Sbjct: 264 IDMQRLNFRPNLSTFASIIGACSVLAAF-EIGEQVQAQLMKTPFFAVIKLGSALIDMYSK 322
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD-GCEPDVVTRNT 208
CG V A RVFD M E++VFSW SM+ Y NG A+E+ + M+++ P+ VT +
Sbjct: 323 CGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLS 382
Query: 209 VMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+ A GLV ++F+ ++ P + + ++ +GR G L E V
Sbjct: 383 ALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMV---DLLGRAGW-LNQAWEFVTR 438
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGK 290
P++ +L SCR G + K
Sbjct: 439 MPERPNSDVWLALLSSCRIHGNIEMAK 465
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 141/360 (39%), Gaps = 70/360 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++ LQ S++ + +++H ++L G + KL+ +Y LR A +F L
Sbjct: 40 FSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLH 99
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA---LLE 119
+ A+ ++ + ++G + ++ + ++ G PDG+ F +LKA + + +
Sbjct: 100 DRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGD 159
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS--------- 170
D +C +++D Y K G V VFD M E++V S
Sbjct: 160 LGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYM 219
Query: 171 ----------------------WNSMMSCYV-CNGLSQRAVEVLESMRVDGCEPDVVTRN 207
+N+M+ Y + + R++EV M+ P++ T
Sbjct: 220 NKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFA 279
Query: 208 TVM-----------------------------------DAYCRMGLVSEASKVFEQIKDP 232
+++ D Y + G V +A +VF+ + +
Sbjct: 280 SIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEK 339
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
NV SWT++I GY G +L +F++M + + P+ L +C G + G EI
Sbjct: 340 NVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEI 399
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 45/325 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH------S 56
L SLL C+ + L KQ+H ++ + G H PFF KL+ +C S H
Sbjct: 12 LLSLLSNCNTT--LKTTKQIHTHLYVTGLHTHPFFFGKLL---LNCAVSISDHVLNYSLR 66
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLA 115
LF P P+ F + +++ S ++ + ++ R + PD + F LK A
Sbjct: 67 LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ V +++ MY++CG E A +VFDEM + +V +WN+++
Sbjct: 127 CSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186
Query: 176 S-CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+ C+ C R + V R +VV +C M + +A
Sbjct: 187 TACFRCG--MWRVLGVSFGWR------EVV--------FCEMKMRDDA------------ 218
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
SW+T+I G++ G + G F+E++ D P +L+GVL +C GA GK +HG
Sbjct: 219 -SWSTMIVGFAKSGSFHDAFGFFKELLRDRNR-PSEVSLTGVLSACAQAGAFEFGKILHG 276
Query: 295 YGLKIMPGEIFYRSAGAALLTLYAR 319
+ K G + S AL+ Y++
Sbjct: 277 FMEK--AGFLCIVSVNNALIDTYSK 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 115/295 (38%), Gaps = 62/295 (21%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
S Q QLH + HG F T LI +YA+C A +F ++ QPNV A+ +++
Sbjct: 128 SKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVT 187
Query: 75 FHSRHGLARQCIETYA-------EMRFK---------------GVSPDGYVFPK------ 106
R G+ R ++ EM+ + G D + F K
Sbjct: 188 ACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDR 247
Query: 107 ----------VLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV--- 153
VL ACAQ A E + V N+++D YSKCG+V
Sbjct: 248 NRPSEVSLTGVLSACAQAGAF-EFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMA 306
Query: 154 --------------EGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+ A RVF EM E D ++ S++ +GL ++ + MR
Sbjct: 307 KLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMR 366
Query: 196 -VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVG 248
G EP + ++D Y R + +A + Q+ PNVI W TL+ S G
Sbjct: 367 NFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHG 421
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 38/300 (12%)
Query: 18 QAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFH 76
+AK++H M+ G LI +Y D + + + Q + ++ S++
Sbjct: 162 RAKEVHGMMIRSGMELSNVVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWAC 221
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
R G +E + M+ + PD + ++ C+ L L E +
Sbjct: 222 HRAGRQELALEQFCCMKAAELLPDEFTCSTLMSVCSNLRDL-EKGKQVFAFCFKVGFVYN 280
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV-LESMR 195
V ++ +D++SKC +E A R+F+E + D NSM+SCY + L + A+++ + ++R
Sbjct: 281 SIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSMISCYARHDLGEDALQLFMPTLR 340
Query: 196 VD----------------------------------GCEPDVVTRNTVMDAYCRMGLVSE 221
+ G E D V N+++D Y + G +
Sbjct: 341 KNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDN 400
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
A +F +IK +++SW T++ G S G+ V++ +F E+ +GM PD L+ VL++C
Sbjct: 401 ALNIFNEIKTKDLVSWNTIMMGLSYNGKVCVTMDLFEELRREGMP-PDRITLAAVLLACN 459
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++L+ CS + L + KQ+ + G ++ I +++ C+ L A LF + Q
Sbjct: 250 STLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQ 309
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ S+++ ++RH L ++ + K + P Y +L + + + E
Sbjct: 310 WDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPV-EVGNQ 368
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V NS++DMY+K G ++ A +F+E++ +D+ SWN++M NG
Sbjct: 369 IHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGK 428
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+++ E +R +G PD +T V+ A LV E K+F Q++
Sbjct: 429 VCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQME 475
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP------- 201
K G V A +FDEM RDV SWN+M+S Y G S A+ V M+ G P
Sbjct: 93 KSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVEMQGAGVRPSGFTFSI 152
Query: 202 --------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
+VV N+++ Y + LV V +K + I
Sbjct: 153 LTSLVSSSCRAKEVHGMMIRSGMELSNVVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFI 212
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SW +LI GR ++L F M + PD S ++ C L L GK++ +
Sbjct: 213 SWNSLIWACHRAGRQELALEQFCCM-KAAELLPDEFTCSTLMSVCSNLRDLEKGKQVFAF 271
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
K+ G ++ +A + L+++
Sbjct: 272 CFKV--GFVYNSIVSSAAIDLFSK 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 46/182 (25%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N +D+Y++ G++ A +VFD++ ++ SWN +C
Sbjct: 54 NRCIDLYTEFGNINDALKVFDDISYKNSTSWN------IC-------------------- 87
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+ + G V +A +F+++ +V+SW T+ISGY+S G +LG+F EM
Sbjct: 88 ---------LKGLFKSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVEM 138
Query: 261 VNDGMVFPDAGALSGV--LVSCRCLGALASGKEIHGYGLKIMPG-EIFYRSAGAALLTLY 317
G V P S + LVS C KE+H G+ I G E+ G +L+ +Y
Sbjct: 139 QGAG-VRPSGFTFSILTSLVSSSC-----RAKEVH--GMMIRSGMELSNVVIGNSLIAMY 190
Query: 318 AR 319
+
Sbjct: 191 GK 192
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 38/258 (14%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC----------DDL 51
H ++LL C + KS N +H + L G + + + I +Y + DD+
Sbjct: 17 HCSTLLDHCLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDLYTEFGNINDALKVFDDI 76
Query: 52 RSAHS---------------------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
+S +F ++P +V ++ ++++ ++ G + + +
Sbjct: 77 SYKNSTSWNICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFV 136
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
EM+ GV P G+ F + + +++ ++ + NS++ MY K
Sbjct: 137 EMQGAGVRPSGFTFSIL---TSLVSSSCRAKEVHGMMIRSGMELSNVVIGNSLIAMYGKF 193
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCN--GLSQRAVEVLESMRVDGCEPDVVTRNT 208
V+ V M++ D SWNS++ + C+ G + A+E M+ PD T +T
Sbjct: 194 DLVDYCFGVILSMKQLDFISWNSLI--WACHRAGRQELALEQFCCMKAAELLPDEFTCST 251
Query: 209 VMDAYCRMGLVSEASKVF 226
+M + + + +VF
Sbjct: 252 LMSVCSNLRDLEKGKQVF 269
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 45/346 (13%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+LL + + S+SL + QLH +++ G P + LI Y+ S+ +F P
Sbjct: 25 NTLL-SLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPH 83
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++S+++ +++ L + + M +GV PD ++FP K+C L++ L
Sbjct: 84 KSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSS-LPVAKM 142
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V +SV+DMY+KCGD+ A VFDEM R+V SW+ ++ YV G
Sbjct: 143 LHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGE 202
Query: 184 SQRAVEVLESMRVDGCEPDV-------------------------------------VTR 206
++ + + V+ V
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVA 262
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++++ Y + G+V EA VFE++ N+ W ++ + + +F +M + G +
Sbjct: 263 SSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGM 322
Query: 267 FPDAGALSGVLVSCRCLGALASGKE----IHGYGLKIMPGEIFYRS 308
+ VL +C G + GK + YG++ PG Y +
Sbjct: 323 KANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIE--PGTQHYST 366
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 16/289 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S ++C SL AK LH + L H F + +I +YA C D+ AH++F ++P
Sbjct: 126 SATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYR 185
Query: 65 NVFAFTSILAFHSRHGLARQCIETY----AEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
NV +++ ++ + + G + + + E +GV + + VL+ C + LL+
Sbjct: 186 NVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGG-STLLQM 242
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
V +S++ +YSKCG VE A VF+E+ R++ WN+M+
Sbjct: 243 GRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQ 302
Query: 181 NGLSQRAVEVLESMR-VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVI 235
+ + + E+ + M+ V G + + +T V+ A GLV + FE +KD P
Sbjct: 303 HAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQ 362
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
++T++ G+ ++ + EM + P +L CR G
Sbjct: 363 HYSTMVDLLGRAGKLNDAVKLIEEMPME----PTESVWGALLTGCRLHG 407
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 5/218 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L +C+ L+ ++Q+H ++ G + L+ +YA C + A +F ++P+P
Sbjct: 169 SVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRP 228
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N + I+ + G A++ + + M GV P + F L AC+ + A LE
Sbjct: 229 NAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHA-LEEGMQI 287
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D V +S+++MY KCG++E RVF ++ +D+ W ++S Y +G +
Sbjct: 288 HGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGKT 347
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
A ++ + M V +V++ N ++ Y R SEA
Sbjct: 348 WDARKLFDQMPVR----NVISWNAMLAGYTRFFKWSEA 381
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 126/290 (43%), Gaps = 36/290 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ C + KS+ A ++ +++ + F + ++ YA C L A LF ++PQ +
Sbjct: 69 FFRHCRSPKSIAAAHKVEFHLVATTRNPPIFLRNRALEAYAKCSSLHDAQELFDEMPQRD 128
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ +++ +SR + I + M GV + F VL +CA + L
Sbjct: 129 GGSWNALITAYSRLRYPDEAISLFLWMNKDGVRANNITFASVLGSCADVYE-LSLSQQVH 187
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ + ++++D+Y+KCG + A R+F E+ + +WN ++ Y+ G ++
Sbjct: 188 GLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGDAK 247
Query: 186 RAVEVLESMRVDGCEP-----------------------------------DVVTRNTVM 210
AV + M DG +P D V ++++
Sbjct: 248 EAVLLFTRMFSDGVKPLNFTFSNALVACSSMHALEEGMQIHGGVVKWGLHEDTVVSSSLI 307
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+ Y + G + +VF Q+ +++ WT ++SGY+ G+ + +F +M
Sbjct: 308 NMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGKTWDARKLFDQM 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N L+ Y+KC + A +FDEM +RD SWN++++ Y A+ + M DG
Sbjct: 102 NRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSRLRYPDEAISLFLWMNKDGVR 161
Query: 201 PDVVTRNTVM-----------------------------------DAYCRMGLVSEASKV 225
+ +T +V+ D Y + G++ A ++
Sbjct: 162 ANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRM 221
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
F +I PN ++W ++ Y VG ++ +F M +DG V P S LV+C + A
Sbjct: 222 FHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDG-VKPLNFTFSNALVACSSMHA 280
Query: 286 LASGKEIHG 294
L G +IHG
Sbjct: 281 LEEGMQIHG 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-PNVFAFTSILAFHS 77
KQLH ++ HG H ++ +Y C +L SA F + + ++ ++LA
Sbjct: 416 GKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLASCG 475
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
H + Q + ++EM+++ P Y F +L ACA +L D
Sbjct: 476 LHHSSEQTLTMFSEMQWEA-KPSKYTFGTLLAACANTYSL-HLGKQIHGFIIRHEFQIDS 533
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
+ +++ MY KC +E A + RDV WN+++ N + A+E+ M +
Sbjct: 534 VIRTALIYMYCKCYCLEYAVEILKGAVSRDVIMWNTLILGCCHNHRGRDALELFGIMEAE 593
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-NVISWTT----LISGYSSVGRHG 251
G +PD VT ++ A GLV ++ FE + + V+ W +I YS RHG
Sbjct: 594 GIKPDRVTFEGILLACVEEGLVEFGTQCFESMSNEYGVLPWLEHYGCMIELYS---RHG 649
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL AC+ + SL+ KQ+H +++ H T LI +Y C L A + +
Sbjct: 503 TLLAACANTYSLHLGKQIHGFIIRHEFQIDSVIRTALIYMYCKCYCLEYAVEILKGAVSR 562
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+V + +++ + R +E + M +G+ PD F +L AC +
Sbjct: 563 DVIMWNTLILGCCHNHRGRDALELFGIMEAEGIKPDRVTFEGILLACVE 611
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
R T L+ Y + A S+F + + NV ++T++++ + ++ ++ +
Sbjct: 200 QRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVL 259
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M P+ + F VL ACA ++L+ D+ S++DMY+KCG
Sbjct: 260 MFKTETRPNHFTFSSVLDACAGSSSLI-MGLQLHPCIIKSGIANDVIWLTSLVDMYAKCG 318
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
D++ A VF+ +R++++ SWN+++ Y +GL+ RA+E + M+V G PD VT V+
Sbjct: 319 DMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PDEVTFVNVLS 377
Query: 212 AYCRMGLVSEASKVFEQIKDPNVIS-----WTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
A GLV E K F + I ++ ++ Y GR + + + M +
Sbjct: 378 ACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFE--- 434
Query: 267 FPDAGALSGVLVSC 280
PD +L +C
Sbjct: 435 -PDVVLWGALLAAC 447
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 45 YADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF 104
Y + + H LF ++P + ++ +L+ R + + +M GV P+ Y
Sbjct: 50 YLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTI 109
Query: 105 PKVLKAC--AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE 162
+L+A +L L+ ++ V +S++ Y+ + E R F++
Sbjct: 110 STLLRAVISTELDVLVRQVHALAFHLGHYL---NVFVGSSLIRAYAGLKEEEALGRAFND 166
Query: 163 MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
+ +DV SWN+++S Y+ G A + M + ++++ T+++ Y + V++A
Sbjct: 167 ISMKDVTSWNALVSSYMELGKFVDAQTAFDQMP----QRNIISWTTLVNGYVKNKQVNKA 222
Query: 223 SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
VF+ + + NV+SWT +ISGY R +L +F M P+ S VL +C
Sbjct: 223 RSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTE-TRPNHFTFSSVLDACAG 281
Query: 283 LGALASGKEIH 293
+L G ++H
Sbjct: 282 SSSLIMGLQLH 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+L AC+ S SL QLH ++ G + T L+ +YA C D+ +A +F +
Sbjct: 272 FSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIR 331
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ ++ +I+ ++ HGLA + +E + M+ G +PD F VL AC + E
Sbjct: 332 DKNLVSWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEK 390
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSC 177
++ + ++D+Y + G + A + M E DV W ++++
Sbjct: 391 HFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAA 446
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 137/342 (40%), Gaps = 45/342 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S LQACS S+++ QA Q++ ++ G F + L A +F P
Sbjct: 64 SALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIR 123
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + +++ + + Q + M +GV PD + F L A +++ L+
Sbjct: 124 DTVTWNTMMGGYLEFS-SEQIPVFWRYMNREGVKPDEFTFASALTGLATISS-LKMGMQV 181
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V NS++DMY K +E + FDE+ +DV SW M + G
Sbjct: 182 HAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEP 241
Query: 185 QRAVEVLESMRVDGCEP-----------------------------------DVVTRNTV 209
+ A+ V+ M+ G +P DV N +
Sbjct: 242 RMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNAL 301
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G + A VF +V+SWTT+I + G+ G +L IF EM + V P+
Sbjct: 302 LDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEM-KETSVEPN 360
Query: 270 AGALSGVLVSCRCLGALASGKEI-----HGYGLKIMPGEIFY 306
VL +C G + G + YG I+PGE Y
Sbjct: 361 YITFICVLYACSQGGFVDEGWKYLSSMDKDYG--IIPGEDHY 400
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 43/313 (13%)
Query: 44 IYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGY 102
+Y C DL SA LF ++P+ NV +++S++ +G A + ++ M +G V P+ +
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 103 VFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE 162
F L+AC+ L+ + ++ + N+ L + G + A ++F+
Sbjct: 61 TFVSALQACS-LSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 163 MRERDVFSWNSMMSCYVCNGLSQRAVEVL-ESMRVDGCEPDVVT---------------- 205
RD +WN+MM Y+ S + V M +G +PD T
Sbjct: 120 SPIRDTVTWNTMMGGYL--EFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKM 177
Query: 206 -------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS 246
N+++D Y + + E K F++I +V SWT + G
Sbjct: 178 GMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQ 237
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
G ++L + +M G V P+ L+ L +C CL ++ GK+ H GL+I G
Sbjct: 238 WGEPRMALAVIAKMKKMG-VKPNKFTLATALNACACLASMEEGKQFH--GLRIKLGSDVD 294
Query: 307 RSAGAALLTLYAR 319
ALL +YA+
Sbjct: 295 VCVDNALLDMYAK 307
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 8/298 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L + SL Q+H ++ G L+ +Y L F ++P
Sbjct: 164 SALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHK 223
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++T + + G R + A+M+ GV P+ + L ACA LA++ E
Sbjct: 224 DVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFH 283
Query: 125 XXXXXXXXXXXDLRVC--NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ VC N++LDMY+KCG ++ A VF R V SW +M+ NG
Sbjct: 284 GLRIKLGS---DVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNG 340
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KDPNVISWTT-L 240
A+++ + M+ EP+ +T V+ A + G V E K + KD +I
Sbjct: 341 QPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHY 400
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
I S +GR G+ + +E++ P +L +C+ G + +GK + +K
Sbjct: 401 ICMVSILGRAGL-IKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIK 457
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + L AC+ S+ + KQ H + GS L+ +YA C + SA ++FR
Sbjct: 263 LATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN 322
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+V ++T+++ +++G + ++ + EM+ V P+ F VL AC+Q
Sbjct: 323 SRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQ 373
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-PQPNVFAFTSILAFH 76
KQ+ +++H LI + L LF L P+P+VF F S++
Sbjct: 25 HVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPLFTHLIPKPHVFIFNSLIRAF 84
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
S + + Y+ M + P+ + FP + K+ + ++ D
Sbjct: 85 SHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQ-SQCVYTHVIKLGYVND 143
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-- 194
+ V NS+LD+Y+ G +E ++FDEM +RDV SW M+ Y G A+ V E M
Sbjct: 144 IYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQY 203
Query: 195 ---------------------------------RVDGCEPDVVTRNTVMDAYCRMGLVSE 221
R +G E DV+ ++D Y + G V E
Sbjct: 204 GGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEE 263
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
KVF +K+ NV + +I G + +L F M DG V D L VL +C
Sbjct: 264 GLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDG-VRADEVTLVTVLSACS 322
Query: 282 CLGALASGKEI 292
G + G+ I
Sbjct: 323 HSGLVEKGRFI 333
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 22/294 (7%)
Query: 1 MHLNSLL----------QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD 50
MH NS+L ++ S S Q++ ++ +++ G + L+ +YA
Sbjct: 100 MHKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGC 159
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
L LF ++PQ +V ++T ++ + G + + +M++ GV P+ L A
Sbjct: 160 LELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSA 219
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
CA A+ E D+ + +++DMY KCG VE +VF +M+E++VF+
Sbjct: 220 CASSCAI-EMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFT 278
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
N ++ + A+ M +DG D VT TV+ A GLV + +F +
Sbjct: 279 LNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLV 338
Query: 231 D------PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
D PNV + ++ + G+ + I + M F A+ G L+
Sbjct: 339 DGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIK-----CMPFEPTAAMWGSLL 387
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
D+ N+++D Y G + ++F+++ +V+SWT +I GY + G++ +L +F +M
Sbjct: 143 DIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQ 202
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEI------HGYGLKIMPGEIFYRSAGAALLT 315
G+V P+ + L +C A+ G I +G+ L ++ G AL+
Sbjct: 203 YGGVV-PNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVI--------LGTALID 253
Query: 316 LYAR 319
+Y +
Sbjct: 254 MYVK 257
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 134/330 (40%), Gaps = 45/330 (13%)
Query: 3 LNSLLQACSASKSLN--QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR- 59
L+S+L AC N + +H + + G T L+ +YA LR A +F
Sbjct: 149 LSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEG 208
Query: 60 -QLPQPNVFAFTSILAFHSRHGL----ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
L N F + +++A R GL AR+ + + EMR GV + F V+KAC
Sbjct: 209 FDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVG- 267
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
E D V +S++D+YS G+++ R F+ + DV SW S
Sbjct: 268 NGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSA 327
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPD-------------------------------- 202
++ V NG + + + DG + D
Sbjct: 328 IAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGV 387
Query: 203 ---VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
V +NT + Y + G + A F++ + P+V+SW+ +I Y+ G SL +F
Sbjct: 388 ADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFEL 447
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M G+V P+ L GVL +C G + G
Sbjct: 448 MTVSGIV-PNQITLLGVLTACSHGGLVDEG 476
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 47/343 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+L +LL C+ +K+L + +H +L++G ++ F LI +Y+ C+ ++++ LF
Sbjct: 43 NLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDN 102
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYA---EMRFKGVSPDGYVFPKVLKACAQ-LAA 116
+ ++ SI++ +++ G E + M G + Y VL AC +
Sbjct: 103 SSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDD 162
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD--EMRERDVFSWNSM 174
++ V ++LDMY+K G + A RVF+ +++ ++ F +N+M
Sbjct: 163 NCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAM 222
Query: 175 MSCYVCNGL----SQRAVEVLESMR--------------VDGC----------------- 199
++ ++ GL ++ AV V MR V C
Sbjct: 223 IAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL 282
Query: 200 ----EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
E D ++++D Y G + + + FE +V+SWT+ I+G G+ L
Sbjct: 283 KNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLS 342
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+F + DG D +S V+ +C + A +G++I GY LK
Sbjct: 343 LFYRFLADGRKL-DEFIVSSVMGACADMAAARTGEQIQGYALK 384
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+++AC + +Q+H +L + F + L+ +Y+ ++ F P
Sbjct: 258 FSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP 317
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V ++TS +A ++G + + G D ++ V+ ACA +AA
Sbjct: 318 KLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQ 377
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V N+ + MY+K GD++ A F E + DV SW+ M+ Y +G
Sbjct: 378 IQGYALKFGVADFTV-VKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHG 436
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
++ ++ + E M V G P+ +T V+ A GLV E +E +K
Sbjct: 437 FAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMK 484
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 10/287 (3%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
SAS SL + +H + +G ++ LI Y+ ++ A +F L ++ ++
Sbjct: 398 SASDSLQMVEMIHSVLCKNGLNKVEVLNA-LISSYSRNGQIKRAFQIFSDLAYKSLISWN 456
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
SI++ +G Q +E ++ + + P+ Y L C+ ++
Sbjct: 457 SIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICS-CTPDMDHGKQVHGYILR 515
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
++ + N+++ MYSKCG ++ + VF+EM ERD +WN+++S Y +G + AV
Sbjct: 516 HGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHC 575
Query: 191 LESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV-- 247
E+M++ G +PD T V+ A GLV +A+++F+ + N+ + + +S +
Sbjct: 576 FEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIM--VNIYGFVPSVDHFSCIVD 633
Query: 248 --GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
GR G L +V DG + +C G L G+++
Sbjct: 634 LLGRSGY-LDEAERVVTDGYFGAHPNMCWSLFSACAVHGNLTLGRKV 679
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 143/357 (40%), Gaps = 56/357 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-- 62
++L C S+ L+ + +H ++ G LI +Y +C + + +F ++
Sbjct: 192 TMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGG 251
Query: 63 -------QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
+ F S+ F + R +M V F VL +C L
Sbjct: 252 VRNHVTYNAMIDGFVSVERFEDAFLMFR-------DMHRGSVCLSEVTFVSVLSSCCSLR 304
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSM 174
+ V N+ + MYS G V A VF+ M E RD+ SWN M
Sbjct: 305 VGCQAQGLAIKMGFDCGYTA---VNNATMTMYSFFGKVNEARSVFEIMEESRDLVSWNVM 361
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR---------------------------- 206
+S + +++ A+ MR +G EPD T
Sbjct: 362 VSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMVEMIHSVLCKNGLNKV 421
Query: 207 ---NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++ +Y R G + A ++F + ++ISW ++ISG+ G L F ++N
Sbjct: 422 EVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNT 481
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ P+A +LS L C C + GK++HGY L+ EI S G AL+T+Y++
Sbjct: 482 HLK-PNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEI---SLGNALVTMYSK 534
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L CS + ++ KQ+H Y+L HG + L+ +Y+ C L + S+F ++ + +
Sbjct: 494 LSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDT 553
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQ 113
+ +I++ +S+HG ++ + + M+ G+ PD F VL AC+
Sbjct: 554 ITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSH 601
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 134/330 (40%), Gaps = 45/330 (13%)
Query: 3 LNSLLQACSASKSLN--QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR- 59
L+S+L AC N + +H + + G T L+ +YA LR A +F
Sbjct: 149 LSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEG 208
Query: 60 -QLPQPNVFAFTSILAFHSRHGL----ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
L N F + +++A R GL AR+ + + EMR GV + F V+KAC
Sbjct: 209 FDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVG- 267
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
E D V +S++D+YS G+++ R F+ + DV SW S
Sbjct: 268 NGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSA 327
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPD-------------------------------- 202
++ V NG + + + DG + D
Sbjct: 328 IAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGV 387
Query: 203 ---VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
V +NT + Y + G + A F++ + P+V+SW+ +I Y+ G SL +F
Sbjct: 388 ADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFEL 447
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M G+V P+ L GVL +C G + G
Sbjct: 448 MTVSGIV-PNQITLLGVLTACSHGGLVDEG 476
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 47/343 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+L +LL C+ +K+L + +H +L++G ++ F LI +Y+ C+ ++++ LF
Sbjct: 43 NLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDN 102
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYA---EMRFKGVSPDGYVFPKVLKACAQ-LAA 116
+ ++ SI++ +++ G E + M G + Y VL AC +
Sbjct: 103 SSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDD 162
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD--EMRERDVFSWNSM 174
++ V ++LDMY+K G + A RVF+ +++ ++ F +N+M
Sbjct: 163 NCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAM 222
Query: 175 MSCYVCNGL----SQRAVEVLESMR--------------VDGC----------------- 199
++ ++ GL ++ AV V MR V C
Sbjct: 223 IAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVL 282
Query: 200 ----EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
E D ++++D Y G + + + FE +V+SWT+ I+G G+ L
Sbjct: 283 KNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLS 342
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+F + DG D +S V+ +C + A +G++I GY LK
Sbjct: 343 LFYRFLADGRKL-DEFIVSSVMGACADMAAARTGEQIQGYALK 384
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+++AC + +Q+H +L + F + L+ +Y+ ++ F P
Sbjct: 258 FSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP 317
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V ++TS +A ++G + + G D ++ V+ ACA +AA
Sbjct: 318 KLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAA--ARTG 375
Query: 123 XXXXXXXXXXXXXDLRVC-NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D V N+ + MY+K GD++ A F E + DV SW+ M+ Y +
Sbjct: 376 EQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQH 435
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
G ++ ++ + E M V G P+ +T V+ A GLV E +E +K
Sbjct: 436 GFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMK 484
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 135/317 (42%), Gaps = 46/317 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYM--LLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
L + AC +K+L KQ+H L +G+H LI Y+ C LR A ++F+
Sbjct: 293 LTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVA--VCNVLISTYSKCKVLRDAKAVFQD 350
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ NV ++T++++ + + + MR GV P+ F +L A + +++
Sbjct: 351 MSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGLLHAIT-IRNMVKE 404
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V NS++ MY+K ++ + ++F+E+ + SWN+++S Y
Sbjct: 405 GLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQ 464
Query: 181 NGLSQRA----VEVLESMRVD--------------------------------GCEPDVV 204
NGL + A + ++ ++ + G D
Sbjct: 465 NGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPF 524
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++D Y + G ++E+ +VF + + SWT +IS Y+ G + + +++E+ +G
Sbjct: 525 VAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREG 584
Query: 265 MVFPDAGALSGVLVSCR 281
LS + CR
Sbjct: 585 SNLDSITFLSVLAACCR 601
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 11/271 (4%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV 97
+ LI +YA + ++ + +F +L ++ ++++ ++++GL ++ T+ K +
Sbjct: 424 SNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSA-IKEI 482
Query: 98 SPDGYVFPKVLKACAQLAAL-LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
P+ Y F VL A A + L+ D V ++LDMY K G++ +
Sbjct: 483 KPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINES 542
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM 216
RVF+E E+ FSW M+S Y +G + + + + + +G D +T +V+ A CR
Sbjct: 543 QRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRK 602
Query: 217 GLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
G+V +F+ + +P ++ ++ VGR L E+++ P
Sbjct: 603 GMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGR----LDEAEELMHQIPGGPGLS 658
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
L +L SC+ G + + + +++ PG
Sbjct: 659 VLQSLLGSCKLHGNVEMAERVVDSLIQMDPG 689
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 43/265 (16%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
QLH ++ G + F L+ +Y+ L A +F ++ ++ ++ ++L+ +++ G
Sbjct: 208 QLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEG 267
Query: 81 --LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+ + + M +G+ D + AC L E +
Sbjct: 268 ECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNL-EFGKQIHGLAQKLGYGTHVA 326
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
VCN ++ YSKC + A VF +M R+V SW +++S + V + +MRVDG
Sbjct: 327 VCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISID-----EENVVSLFNAMRVDG 381
Query: 199 CEPDVVT-----------------------------------RNTVMDAYCRMGLVSEAS 223
P+ VT N+++ Y + + E+
Sbjct: 382 VYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESK 441
Query: 224 KVFEQIKDPNVISWTTLISGYSSVG 248
K+FE++ ISW LISGY+ G
Sbjct: 442 KIFEELNYQGTISWNALISGYAQNG 466
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 65/302 (21%)
Query: 52 RSAHSLFRQLPQPNVFAFT-SILAFHSRHGLARQCIETYA-EMRFKGV-SPDGYVFPKVL 108
+ H+LF ++PQPN + S+L F ++ L Q + + + +F + + D
Sbjct: 35 KHEHNLFEKIPQPNASSINRSMLNFLHKN-LPFQALSVFKNQTQFPFLQNIDEVTLALSF 93
Query: 109 KAC-------AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD 161
KAC AQ+ + + V NS++ MY K G E A VF+
Sbjct: 94 KACRGEFILGAQIHGFV----------VATGFVSRVTVSNSLMKMYCKAGRFELALCVFE 143
Query: 162 EMRERDVFSWNSMMS------------CYV-CNGLSQRAVEV------------------ 190
+ D+ SWN+++S C++ NG+ V
Sbjct: 144 GLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGF 203
Query: 191 -----LESMRVD---GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L S+ V GCE V N ++ Y R G + EA +VF ++ +++SW ++S
Sbjct: 204 LFGLQLHSLVVKCGFGCE--VFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLS 261
Query: 243 GYSSVGR-HGV-SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
GY+ G +G+ ++ +F MV +GM+ D +L+G + +C L GK+IHG K+
Sbjct: 262 GYAQEGECYGLEAVLLFGNMVREGMLL-DHVSLTGAISACGYTKNLEFGKQIHGLAQKLG 320
Query: 301 PG 302
G
Sbjct: 321 YG 322
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I + D + A F+Q P+ N+ ++TS++ ++R+G + + +M+ D
Sbjct: 276 IIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLD 335
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
V VL ACA LA L+ L V NS+++MY+KCGD+EG+
Sbjct: 336 DLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKY-LFVGNSLINMYAKCGDIEGSKLAL 394
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ ++D+ SWNSM+ + NG A+ + M G PD VT ++ +GL+
Sbjct: 395 RGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLID 454
Query: 221 EASKVFEQI 229
E F+ +
Sbjct: 455 EGFAFFQSM 463
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 66/314 (21%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ YA+ A +FR +P+ A+ I+A H+R G C+ + EM PD
Sbjct: 144 LLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPD 203
Query: 101 GYVFPKVLKACAQ------------------LAALLEXXXXXXXXXXXXXXXXD-LRVCN 141
+ F ++ AC + + +E D ++V N
Sbjct: 204 QWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFN 263
Query: 142 S-----------VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
S ++D + K GD + A F + E+++ SW SM+ Y NG A+ +
Sbjct: 264 SGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSL 323
Query: 191 LESMRVDGCEPD-----------------------------------VVTRNTVMDAYCR 215
M+ + + D + N++++ Y +
Sbjct: 324 FLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAK 383
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G + + I D +++SW +++ + GR ++ +FREMV G V PD +G
Sbjct: 384 CGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASG-VRPDEVTFTG 442
Query: 276 VLVSCRCLGALASG 289
+L++C LG + G
Sbjct: 443 LLMTCSHLGLIDEG 456
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACA 112
A LF ++P+ + A+ ++L +SR GL +Q + + MR PD + + + +CA
Sbjct: 24 ARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSCA 83
Query: 113 QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWN 172
A+ + L V N+++DMY KC + A +VFDEM + +W
Sbjct: 84 G-ASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWC 142
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQ 228
S++ Y A E+ SM E + N ++ A+ R G V +F E
Sbjct: 143 SLLFAYANTCRFDMAFEIFRSMP----EKVEIAWNIIIAAHARCGEVEACLHLFKEMCEN 198
Query: 229 IKDPNVISWTTLISG 243
+ P+ +++ L+S
Sbjct: 199 LYQPDQWTFSALMSA 213
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 36/149 (24%)
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR------------ 195
++ G + A ++FDEM ERD +WN+M++ Y GL Q+ ++ +SMR
Sbjct: 16 ARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSY 75
Query: 196 ------------------------VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
V G + + N ++D Y + ++A KVF+++
Sbjct: 76 SAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNY 135
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREM 260
N ++W +L+ Y++ R ++ IFR M
Sbjct: 136 SNEVTWCSLLFAYANTCRFDMAFEIFRSM 164
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC++ L K +H ++ G + F LI +YA C D+ + R +
Sbjct: 341 AVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDK 400
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
++ ++ S+L +G + I + EM GV PD F +L C+ L + E
Sbjct: 401 DLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDE 455
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I YA D+ SA F + P+ + + ++++ + ++ ++ + + M+ + PD
Sbjct: 179 MISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPD 238
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+F +L ACA L AL +R+ S+LDMY+KCG++E A R+F
Sbjct: 239 ESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLF 298
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
D M RDV WN+M+S +G + A+++ M G +PD +T V A G+
Sbjct: 299 DSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAY 358
Query: 221 EASKVFEQI 229
E + +++
Sbjct: 359 EGLMLLDKM 367
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 125/323 (38%), Gaps = 55/323 (17%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS-------LF 58
LL+ C KS+ KQ H + G F L ++ A C + H +F
Sbjct: 11 LLEKC---KSMKHLKQAHAQVFTTGLENNTF---ALSRVLAFCSSHKHHHESLTYACRVF 64
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
Q+ P V + +++ + + ++ + +M + PD Y P VLKAC
Sbjct: 65 EQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDC- 123
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V NS++ MY GDV A VFDE+ +V SW+ M+S
Sbjct: 124 SFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMIS-- 181
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
Y ++G V A F++ + + W
Sbjct: 182 ---------------------------------GYAKVGDVDSARLFFDEAPEKDKGIWG 208
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY--G 296
+ISGY SL +FR M +V PD +L +C LGAL G IH +
Sbjct: 209 AMISGYVQNSCFKESLYLFRLMQLTDIV-PDESIFVSILSACAHLGALEIGVWIHQHLNQ 267
Query: 297 LKIMPGEIFYRSAGAALLTLYAR 319
LK++P + +LL +YA+
Sbjct: 268 LKLVPLSV---RLSTSLLDMYAK 287
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 1/232 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L ACS + L +++H + G + L+ +Y+ C L +A +F +
Sbjct: 256 SSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEEL 315
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + T IL +++G + I+ + +M G+ D + VL + L
Sbjct: 316 DGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFG-VGTYLALGKQI 374
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N +++MYSKCGD+ + VF +M +++ SWNS+++ + +G
Sbjct: 375 HSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDG 434
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+A++ E MRV+G P VT +++ A GLV + ++ E + + + IS
Sbjct: 435 FKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGIS 486
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 45/225 (20%)
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR- 195
L + NS+L MYSKCG+ A VFD M RD SWN+M+S ++ NG + + + M
Sbjct: 77 LFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTE 136
Query: 196 ----------------------------------------VDGCEPDVVTRNTVMDAYCR 215
V G E ++ N ++ +Y +
Sbjct: 137 SNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFK 196
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
S+ KVF+++ + NV++WT +ISG + + SL +F +M G V P+
Sbjct: 197 CECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLS 256
Query: 276 VLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
L++C L L G++IHG K+ M ++ S AL+ LY++
Sbjct: 257 SLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIES---ALMDLYSK 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 19/234 (8%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
KQ+H ++ PF L+ +Y+ C DL + +F Q+ Q N ++ S++A +R
Sbjct: 371 GKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFAR 430
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX---XXXXX 135
HG + ++ Y EMR +GV+P F +L AC+ A L+E
Sbjct: 431 HGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSH-AGLVEKGMELLESMTNDHGISPRS 489
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNG---LSQRAVEVL 191
+ C V+DM + G + A + + + E V W +++ +G + + A + L
Sbjct: 490 EHYAC--VVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRL 547
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV-----ISWTTL 240
S P V+ N Y G E + +++K+ V ISW +
Sbjct: 548 FSAAPASPAPYVLMANI----YSSEGNWKERASSIKRMKEMGVAKEVGISWIEI 597
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I + + A +LF+Q+ + + ++ +++G + + +++M G+
Sbjct: 222 TAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQ 281
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD F + ACA LA LL+ DL V N+++ MYSKCG++ +
Sbjct: 282 PDDLTFVSLFTACASLA-LLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISEL 340
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
FD++ D+ SWN++++ + +GL RA + M G PD +T ++ A CR G
Sbjct: 341 AFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGK 400
Query: 219 VSEASKVFE 227
V E +F+
Sbjct: 401 VDETVNLFD 409
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 131/326 (40%), Gaps = 50/326 (15%)
Query: 28 LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIE 87
L + + +F I + ++ +A LF + Q ++ + S+L + ++G +
Sbjct: 22 LFSTQQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKS 81
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
+ + K + + ++ AC Q ++ N+++ +
Sbjct: 82 LFNSIPIKNIVS----WNSIITACIQ-----NDNINDAFSYFTAMPEKNVASYNAMMSGF 132
Query: 148 SKCGDVEGAARVFDE----------------------------------MRERDVFSWNS 173
K G VE A +VF+E M R+ SW
Sbjct: 133 VKMGRVEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTV 192
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
M+S V NGL + A EV M + +VV ++ +C+ G + EA +F+QI+ +
Sbjct: 193 MISGLVENGLHEEAWEVFVRMP----QKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKD 248
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
W +I+G++ GR +L +F +MV GM PD + +C L L G++ +
Sbjct: 249 RACWNIMITGFAQNGRGEEALNLFSQMVRTGMQ-PDDLTFVSLFTACASLALLDEGRQTN 307
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
L I G S AL+T+Y++
Sbjct: 308 --ALAIKHGLNSDLSVSNALVTMYSK 331
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL AC++ L++ +Q + + HG + + L+ +Y+ C ++ + F Q+ P
Sbjct: 289 SLFTACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHP 348
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ +I+A ++HGL + + M GV+PDG F +L AC + + E
Sbjct: 349 DIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLF 408
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM 175
+ V+D+ S+ G + A +V EM E D W + +
Sbjct: 409 DLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFL 460
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 59/328 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N L+ K L A++L +M + R +I YA DL A LF + P
Sbjct: 176 NCLMGGYVKRKMLGDARRLFDHMPV----RNAISWNTMISGYARDGDLLQARRLFEESPV 231
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFK-----GVSPDGYVFPKVLKACAQLAALL 118
+VF +T+++ + + G+ + + EM K V GYV K + +L +
Sbjct: 232 RDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAM 291
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
++ N+++ Y + GD+ A +FD M +RD SW ++++ Y
Sbjct: 292 PCR--------------NVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGY 337
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVT--------------------------------- 205
G ++ + +L M+ DG + T
Sbjct: 338 AQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGC 397
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N +++ YC+ G + EA VFE+++ ++ISW T+++GY+ G +L +F M
Sbjct: 398 LVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTA 457
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE 291
G PD + GVL++C G G E
Sbjct: 458 GFK-PDEITMVGVLLACSHTGLTDRGTE 484
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M N ++ K ++ A++L M R +I Y D+ A LF
Sbjct: 266 MAYNVMIAGYVQYKKMDMARELFEAM----PCRNVGSWNTIISGYGQNGDIAQARELFDM 321
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ Q + ++ +I+A +++ G + + +M+ G S + F L CA +AAL+
Sbjct: 322 MTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLG 381
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
L V N++L+MY KCG + A VF+ M+ +D+ SWN+M++ Y
Sbjct: 382 KQVHGQAVKTGYDNGCL-VGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYAR 440
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KD----PNVI 235
+G ++A+ V +SM+ G +PD +T V+ A GL ++ F + KD PN
Sbjct: 441 HGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSK 500
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+ +I G + + R M + PDA +L + R G G++
Sbjct: 501 HYNCMIDLLGRAGLLEEAHNLMRNMPFE----PDAATWGALLGASRIHGNAELGEK 552
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 30/206 (14%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM------ 194
N+++ Y++ GD+ A R+F+E RDVF+W +M+ YV +G+ A V + M
Sbjct: 207 NTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREM 266
Query: 195 -------------RVDGCEP--------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
++D +V + NT++ Y + G +++A ++F+ + +
Sbjct: 267 AYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRD 326
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+SW +I+GY+ G + + + +M DG + L +C + AL GK++H
Sbjct: 327 CVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSL-NRSTFCCALSTCAGMAALVLGKQVH 385
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
G +K G G ALL +Y +
Sbjct: 386 GQAVK--TGYDNGCLVGNALLEMYCK 409
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N +L Y + G V+ A VFD M +D SWN +++ YV NG + A + ES +VD
Sbjct: 114 NVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFES-KVDW-- 170
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
++++ N +M Y + ++ +A ++F+ + N ISW T+ISGY+ G + +F E
Sbjct: 171 -ELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEES 229
Query: 261 -VND-----GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAA 312
V D MVF A SG+L R + GK Y + I G + Y+ A
Sbjct: 230 PVRDVFTWTAMVF--AYVQSGMLDEARRVFDEMPGKREMAYNVMI-AGYVQYKKMDMA 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 12/245 (4%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L C+ +L KQ+H + G L+++Y C + A+ +F ++ ++
Sbjct: 369 LSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDI 428
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ ++LA ++RHG RQ + + M+ G PD VL AC+
Sbjct: 429 ISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYS 488
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNG--- 182
+ + N ++D+ + G +E A + M E D +W +++ +G
Sbjct: 489 MSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAE 548
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L ++A E++ +M + V+ N Y +G + K+ +++ + I
Sbjct: 549 LGEKAAEMVFNMEPNNAGMYVLLSNL----YATLGKWVDVGKLRLKMRQLGIQK----IP 600
Query: 243 GYSSV 247
GYS V
Sbjct: 601 GYSWV 605
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
C + + + + G A RVFD M +++FSWN M++ YV N A + + M
Sbjct: 51 CTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMP---- 106
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+ D V+ N ++ Y R G V EA VF+ + + ISW L++ Y GR + +F
Sbjct: 107 QKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFES 166
Query: 260 MVN 262
V+
Sbjct: 167 KVD 169
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKP----FFTTKLIQIYADCDDLRSAHSLFRQL 61
L AC+ K + Q LHHY+L H K F T L+ +Y C L A LF Q+
Sbjct: 84 LFHACAQKKYIKQGMALHHYIL--NKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQM 141
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P+ N ++T +++ +++ GL R+C ++ M P+ + F VL AC + ++
Sbjct: 142 PRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACEEQD--VKYG 198
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCG---------DVEGAARVFDEMRERDVFSWN 172
+ V N+++ MYSKC + A VF M R++ SWN
Sbjct: 199 LQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWN 258
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
SM+S + GL +A+ + M +G + T
Sbjct: 259 SMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTT 291
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 26/297 (8%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLH------GSHRKPFFTTKLIQIYADCD-DLRSAH 55
L+SL S S +N L + LH G + T L++ YAD +
Sbjct: 296 LSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCF 355
Query: 56 SLFRQLP-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
LF + ++ ++T+I++ + Q + ++ + D + F LKACA
Sbjct: 356 KLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALKACAYF 414
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
+ D V N+++ Y + G + + +VF EM D+ SWNSM
Sbjct: 415 VTE-KNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSM 473
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
+ Y +G ++ A+++ + M V PD T ++ A GLV E +++F + +
Sbjct: 474 LKSYAIHGRAKDALDLFKQMDV---HPDSATFVALLAACSHAGLVEEGTQIFNSMTESHG 530
Query: 232 --PNVISWTTLISGYSSVGRHGVSLGIF--REMVNDGMVFPDAGALSGVLVSCRCLG 284
P++ ++ ++ Y G+ IF E++ + PD+ S +L SCR G
Sbjct: 531 IAPHLDHYSCMVDLYGRAGK------IFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 581
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 116/321 (36%), Gaps = 78/321 (24%)
Query: 36 FFTTKLIQIYADC---------DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCI 86
+ LI +Y+ C A +F+ + N+ ++ S+++ GL + I
Sbjct: 215 YVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAI 274
Query: 87 ETYAEMRFKGVSPDGYVFPKVL-------------------KACAQLAALLEXXXXXXXX 127
+A M G+ + VL K C QL L
Sbjct: 275 GLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCL---------- 324
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCG-DVEGAARVF-DEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V +++ Y+ G + ++F D E D+ SW +++S + Q
Sbjct: 325 TVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDPEQ 384
Query: 186 ----------------------------------RAVEVLESMRVDGCEPDVVTRNTVMD 211
A EV + G D V N ++
Sbjct: 385 AFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIH 444
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
AY R G ++ + +VF ++ +++SW +++ Y+ GR +L +F++M V PD+
Sbjct: 445 AYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD----VHPDSA 500
Query: 272 ALSGVLVSCRCLGALASGKEI 292
+L +C G + G +I
Sbjct: 501 TFVALLAACSHAGLVEEGTQI 521
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+ D+ N +++ YC+ G + A +F+Q+ N +SWT L+SGY+ G +F
Sbjct: 112 QNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSG 171
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
M+ P+ A + VL +C + G ++H LK+ F AL+T+Y++
Sbjct: 172 ML--ACFRPNEFAFASVLCACE-EQDVKYGLQVHAAALKMSLD--FSVYVANALITMYSK 226
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 143/347 (41%), Gaps = 74/347 (21%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF---RQLPQPNVFAFTS 71
+L +Q H ++L H + ++ I A + ++S+F P P +F + +
Sbjct: 25 TLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFP-IFVYNN 83
Query: 72 IL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
I+ A +S + A+ + + +R G+S D Y P VLK+ L
Sbjct: 84 IIYALYSSN--AKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDF-GLGKQIHCVGVV 140
Query: 131 XXXXXDLRVCNSVLDMYS-----------------------------KCGDVEGAARVFD 161
++ VC+S++ MYS K GDV A ++FD
Sbjct: 141 TGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFD 200
Query: 162 EM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD----------------- 202
M R++DVFSW +M+S Y A+++ M+++ +PD
Sbjct: 201 SMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGAL 260
Query: 203 ------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
V N+++D Y + G + +A ++FE +K +I+WTT+I+G
Sbjct: 261 HLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGL 320
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+ G +L +F M + V P+ +L +C +G + G++
Sbjct: 321 ALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRD 367
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ--PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+I Y D+ +A LF + + +VF++T++++ +++ + I+ + M+ + V
Sbjct: 182 MIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVK 241
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD VL ACA L AL + + NS++DMY+K G++ A
Sbjct: 242 PDEIAILAVLSACADLGAL-HLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALE 300
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMG 217
+F+ M+ + + +W +M++ +GL + A+ V M + D +P+ VT ++ A +G
Sbjct: 301 LFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVG 360
Query: 218 LVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LV F ++ +P + + +I +GR G L +EMV M F A
Sbjct: 361 LVELGRDYFTSMRSRYGIEPKIEHYGCMI---DLLGRAG-HLQEAKEMVLR-MPFEANAA 415
Query: 273 LSGVLV--SCRC 282
+ G L+ S RC
Sbjct: 416 IWGSLLAASTRC 427
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 103/233 (44%), Gaps = 5/233 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC+ +L+ + +H+Y+ H + LI +YA ++R A LF +
Sbjct: 249 AVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHK 308
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXX 123
+ +T+++A + HGL ++ + ++ M + V P+ F +L AC+ + +
Sbjct: 309 TIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDY 368
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNG 182
+ ++D+ + G ++ A + M E + W S+++ G
Sbjct: 369 FTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCG 428
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
++ A E L + V EP +++ + Y +G +E+ V + ++D V
Sbjct: 429 DAELAEEALRHLTV--LEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGV 479
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 47/323 (14%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+H SLLQ S ++ + Q+ ++ +R PF + L+ ++ + +F
Sbjct: 37 LHFQSLLQP-SHCQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLIFHH 95
Query: 61 LPQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P + F +++ + + + I Y G + Y F ++ AC++++ + +
Sbjct: 96 FNNPLDTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCV-D 154
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
L V NS+ MY CG VE A +FD M RD+ SWNSM
Sbjct: 155 NGKMCHGQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSM----- 209
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
+D Y ++G +S A K+F+ + + N+++W
Sbjct: 210 ------------------------------IDGYVKVGDLSAAHKLFDVMPERNLVTWNC 239
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
LISGYS G +L +FREM + +A + + +C G L GK +HG ++
Sbjct: 240 LISGYSKGRNPGYALKLFREM-GRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIR- 297
Query: 300 MPGEIFYRSA---GAALLTLYAR 319
+F RS+ AL+ +Y +
Sbjct: 298 ----LFMRSSLILDTALIDMYCK 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 30/304 (9%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y DL +AH LF +P+ N+ + +++ +S+ ++ + EM + +
Sbjct: 209 MIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIREN 268
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ AC + + L+ L + +++DMY KCG VE A++VF
Sbjct: 269 ARTMVCAVTACGR-SGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASKVF 327
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM----RVDG----------------CE 200
+ M R++ SWN+M+ + +G + + + + M RV G
Sbjct: 328 ERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMERVKGEVEVDESSSADRGLVRLL 387
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLG 255
PD +T ++ A R L+SE F+Q+ D PN + + + ++VG +
Sbjct: 388 PDEITFIGILCACARAELLSEGRSYFKQMIDVFGLKPNFAHFWCMANLLANVGLIDEAEE 447
Query: 256 IFREMVN-DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
+ M DG + ++ + +L CR + G++I + P + Y LL
Sbjct: 448 CLKNMAKFDGYISHESLLWASLLGLCRFKRDVYLGEQIAKLLIDTDPNNLAYYQ---FLL 504
Query: 315 TLYA 318
+YA
Sbjct: 505 IIYA 508
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 134/306 (43%), Gaps = 26/306 (8%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP---------------- 62
+QLH +L G + + + L+++Y C + A ++ + +P
Sbjct: 285 GRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEP 344
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +++S+++ + +G ++T+ M + + D ++ ACA A +LE
Sbjct: 345 KARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACAN-AGILEFGK 403
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V +S++DMYSK G ++ A +F++++E +V W SM+S +G
Sbjct: 404 QIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG 463
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
+ A+ + E M G P+ VT V++A +GL+ E + F +KD P V +
Sbjct: 464 QGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHY 523
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
T++++ Y G L + + + + L SCR GK + L
Sbjct: 524 TSMVNLYGRAGH----LIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLL 579
Query: 298 KIMPGE 303
+ P +
Sbjct: 580 QSAPSD 585
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L + ++ S + LH + GS + L+ +Y +L AH LF ++
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 65 NVFAFTSILAFHSRH-GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N +T +++ +R G + + EM+ G P+ Y VLK C++ ++
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSR-ENNIQFGKG 155
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ + NS+LD+Y KC + E A F+ M E+DV SWN M+ Y+ G
Sbjct: 156 IHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGD 215
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
++++E+ + DVV+ NT++D + G
Sbjct: 216 VEKSLEMFRNFP----NKDVVSWNTIIDGLIQCG 245
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+++ AC+ + L KQ+H Y+ G + + LI +Y+ L A +F Q+ +P
Sbjct: 388 TIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEP 447
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV +TS+++ + HG ++ I + M G+ P+ F VL AC+ + + E
Sbjct: 448 NVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYF 507
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGD-VEGAARVFDEMRERDVFSWNSMMS 176
++ S++++Y + G +E +F+ W S +S
Sbjct: 508 RMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS-SVGRHGVSLGIFREMVNDGM 265
N ++ Y + + A K+F++I N +WT LISG++ + G + +FREM DG
Sbjct: 71 NYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGA 130
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
P+ LS VL C + GK IH + L+
Sbjct: 131 C-PNQYTLSSVLKCCSRENNIQFGKGIHAWILR 162
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 8/237 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L A S K +N KQ+H ++ G F + LI Y+ +++ A +F ++P
Sbjct: 106 LCSTLTASSKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALVFDEIP 165
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXX 121
N ++L+ + GL + E +M + D + L+AC L+++ +
Sbjct: 166 DRNTVCANALLSGYCEFGLWVKAFELIRKMPLLKLKYDHFTLSAALRACTGLSSVEMGRQ 225
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF--DEM-----RERDVFSWNSM 174
D+ + +++++MY KCG VE A VF D M R RDV W SM
Sbjct: 226 LHSYLLRTMADIESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDVVFWTSM 285
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ Y NG + +++ M +G +PD ++ T++ A G V K FE + +
Sbjct: 286 LGVYGKNGHYKEVIDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGVKYFESMTN 342
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 58/255 (22%)
Query: 22 LHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF-------AFTSILA 74
LH Y L + S P L + +A + LR+A F ++ + F AF S +
Sbjct: 140 LHSYTLCNSS---PLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSML 196
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
+ R L + Y +MR +SP+ Y
Sbjct: 197 YLKRPELV---VSFYRQMRRNRISPNVYTI------------------------------ 223
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEV 190
N V+ Y K G++ A+ V ++M++ +V ++NS++S Y GL A++V
Sbjct: 224 ------NMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKV 277
Query: 191 LESMR-VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYS 245
+ M +G P+VVT NT+++ +C+ G + EA++VF ++K PNV+++ TLI+G+
Sbjct: 278 RDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFG 337
Query: 246 SVGRHGVSLGIFREM 260
G + +G+F EM
Sbjct: 338 QAGNSEMGIGLFEEM 352
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVF----SWNSMMSCYVCNGLSQRAVEVLESM 194
V +++ ++ + A F +M+E F S N+ +S + + V M
Sbjct: 152 VFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQM 211
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRH 250
R + P+V T N V+ AYC++G +++AS+V E++KD PNV+++ +LISGY G
Sbjct: 212 RRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLL 271
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVL 277
G++L + M+ VFP+ + ++
Sbjct: 272 GLALKVRDLMMGKNGVFPNVVTFNTLI 298
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 39/323 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
LL+ CS+ + ++ + +H +L G F L+ Y+ C SA F +
Sbjct: 210 LLRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVE 269
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ S+++ ++ + L +E + M+ G P F L C++ +
Sbjct: 270 DVISWNSMVSVYADNNLVNDALEFFNFMQMWGHRPSVRSFIGFLNLCSRNKEIGLGKQIH 329
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++++DMY KC D++ + VF+ + + + NS+M+ G
Sbjct: 330 CCVMKFGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKMTLECCNSLMTSLSHCGCV 389
Query: 185 QRAVEVLESMRVDGCEPDVVTRNT------------------------------------ 208
+ VE+ M +G PD VT +T
Sbjct: 390 EDVVELFGLMVDEGLMPDEVTVSTTLKALSVSASASFTSSQSLHCFALKSGVEGDTTVLC 449
Query: 209 -VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+MDAY R G + ++FE I PN I +T++I+GY+ G L + M+ G V
Sbjct: 450 SLMDAYSRCGHWELSHRIFETIPTPNAICFTSMINGYARNGMGKEGLLLLHAMIEKG-VK 508
Query: 268 PDAGALSGVLVSCRCLGALASGK 290
PD L C G + G+
Sbjct: 509 PDEVTFLCALTGCSHTGLIQQGR 531
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L CS +K + KQ+H ++ G R + + LI +Y C D++S+ ++F LP+
Sbjct: 312 FLNLCSRNKEIGLGKQIHCCVMKFGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKM 371
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA-ALLEXXXX 123
+ S++ S G +E + M +G+ PD LKA + A A
Sbjct: 372 TLECCNSLMTSLSHCGCVEDVVELFGLMVDEGLMPDEVTVSTTLKALSVSASASFTSSQS 431
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V S++D YS+CG E + R+F+ + + + SM++ Y NG+
Sbjct: 432 LHCFALKSGVEGDTTVLCSLMDAYSRCGHWELSHRIFETIPTPNAICFTSMINGYARNGM 491
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+ + +L +M G +PD VT + GL+ + +F +K
Sbjct: 492 GKEGLLLLHAMIEKGVKPDEVTFLCALTGCSHTGLIQQGRILFNSMK 538
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 49/338 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ C+ + + Q+H ++ G F L+ Y + A LF +L +
Sbjct: 106 SVVALCTNNGFCREGSQVHSRVVKFGFLNNVFVGGALVGFYMNLGLSGVALKLFDELSER 165
Query: 65 NVFAFTSILAFHSRHGLARQCIET------YAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
N+ + + G C+E YA M F+GV +G F +L+ C+
Sbjct: 166 NLGVWNVMFRGFCEMG----CVEVEELLGFYARMCFEGVEANGVTFCYLLRGCSSKRRFH 221
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E ++ V N+++D YS CG A + F+ ++ DV SWNSM+S Y
Sbjct: 222 EGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVEDVISWNSMVSVY 281
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDV---------VTRNTVM------------------D 211
N L A+E M++ G P V +RN +
Sbjct: 282 ADNNLVNDALEFFNFMQMWGHRPSVRSFIGFLNLCSRNKEIGLGKQIHCCVMKFGFDERS 341
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISW---------TTLISGYSSVGRHGVSLGIFREMVN 262
Y + L+ K + NV W +L++ S G + +F MV+
Sbjct: 342 VYVQSALIDMYGKCLDIQSSVNVFEWLPKMTLECCNSLMTSLSHCGCVEDVVELFGLMVD 401
Query: 263 DGMVFPDAGALSGVL--VSCRCLGALASGKEIHGYGLK 298
+G++ PD +S L +S + S + +H + LK
Sbjct: 402 EGLM-PDEVTVSTTLKALSVSASASFTSSQSLHCFALK 438
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
SAS S ++ LH + L G L+ Y+ C +H +F +P PN FT
Sbjct: 421 SASASFTSSQSLHCFALKSGVEGDTTVLCSLMDAYSRCGHWELSHRIFETIPTPNAICFT 480
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
S++ ++R+G+ ++ + M KGV PD F L C+ + +
Sbjct: 481 SMINGYARNGMGKEGLLLLHAMIEKGVKPDEVTFLCALTGCSHTGLIQQGRILFNSMKSL 540
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM-SCYV 179
D R + ++D+ + G + A + + + D F W+S++ SC V
Sbjct: 541 HGVHPDRRHISCMVDLLCRAGLLHEAEEFLLKAQGKGDCFMWSSLLQSCRV 591
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 45/324 (13%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIYADCDDLRSAHSLF 58
+H SLL+ CS + +L +QLH ++ G P F L+ +Y C A LF
Sbjct: 21 LHFRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLF 80
Query: 59 RQLPQ--PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
++PQ + +T+++ RH + ++ + +MR + DG V L ACA+L
Sbjct: 81 DEIPQSHKDSVDYTALI----RHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGG 136
Query: 117 LLEXXXXXXXXXXXXXXXXDL-RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+VCN+++++Y K G V A ++F+ + R V SW
Sbjct: 137 GDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSW---- 192
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
SC++ GL + E +ES RV +F+++ + N +
Sbjct: 193 SCFL-EGLVKW--ESVESGRV----------------------------LFDEMPERNEV 221
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+WT +I GY G + + +EMV L VL +C G + G+ +H Y
Sbjct: 222 AWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCY 281
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
+K M G F G +L+ +YA+
Sbjct: 282 AVKEM-GLDFGVMVGTSLVDMYAK 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 49 DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKV 107
+ + S LF ++P+ N A+T ++ + +G ++ EM F G V
Sbjct: 203 ESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSV 262
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD 167
L AC+Q + + V S++DMY+KCG + A VF M +R+
Sbjct: 263 LSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRN 322
Query: 168 VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE 227
V +WN+M+ +G+ + AV++ SM V+ +PD VT ++ A GLV + F
Sbjct: 323 VVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSGLVEKGWDYFH 381
Query: 228 QIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
++ P + + ++ GR L MV + + P+ L ++ SC
Sbjct: 382 DLEPVYRIKPEIEHYACMVGLLGRAGR----LEEAEIMVKNMRIPPNEVVLGSLIGSCYA 437
Query: 283 LGALASGKEI 292
G L G++I
Sbjct: 438 HGRLQLGEKI 447
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLH-GSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L S+L ACS S + + +H Y + G T L+ +YA C + +A S+FR +
Sbjct: 259 LCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM 318
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ NV A+ ++L + HG+ + ++ + M + V PDG F +L AC+
Sbjct: 319 LKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSH 369
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
++I + ++ A +F + + + + +++ R GL + + +A M+ +GV+
Sbjct: 273 NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVA 332
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
+ VL CA LA+L + DL V + ++ MY KCGD+ A
Sbjct: 333 LNFPSMISVLSVCASLASL-DHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
+F+ +DV WNSM++ Y +GL + A+ V M G +PD VT V+ A G
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
V E ++FE +K +P + + ++ GR ++ E+V + PDA
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAM----ELVEKMPMEPDAIVW 507
Query: 274 SGVLVSCR 281
+L +CR
Sbjct: 508 GALLGACR 515
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM------ 194
N ++ Y K G V A +VFD M ER+V SW SM+ YV G+ + A ++ M
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 195 -------------RVDGC--------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
R+D E DVV ++ YC++G + EA ++F+++K N
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRN 206
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREM 260
V +WTT++SGY+ GR V+ +F M
Sbjct: 207 VFTWTTMVSGYAKNGRVDVARKLFEVM 233
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 121/312 (38%), Gaps = 80/312 (25%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L++A++L M + R F T ++ YA + A LF +P+ N ++T++L
Sbjct: 192 LDEARELFDEMKV----RNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMG 247
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+++ G ++ E + M K +
Sbjct: 248 YTQSGRMKEAFELFEAMPVKWIV------------------------------------- 270
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
CN ++ + G++ A +F+ M+ERD +WN+M+ + GL A+ + M+
Sbjct: 271 ---ACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQ 327
Query: 196 VDGC-----------------------------------EPDVVTRNTVMDAYCRMGLVS 220
+G + D+ + ++ Y + G +
Sbjct: 328 REGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLV 387
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
A +F + +V+ W ++I+GYS G +L +F +M + G V PD GVL +C
Sbjct: 388 RAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG-VQPDEVTFIGVLSAC 446
Query: 281 RCLGALASGKEI 292
G + G EI
Sbjct: 447 SYSGKVKEGFEI 458
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y + A +F +P+ NV ++TS++ + + G+ + + + EM + V
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +LK E D+ V +++ Y + G ++ A +F
Sbjct: 149 TVMIGGLLK---------ESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELF 199
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
DEM+ R+VF+W +M+S Y NG A ++ E M E + V+ ++ Y + G +
Sbjct: 200 DEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM----PERNEVSWTAMLMGYTQSGRMK 255
Query: 221 EASKVFEQI-------------------------------KDPNVISWTTLISGYSSVGR 249
EA ++FE + K+ + +W +I + G
Sbjct: 256 EAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGL 315
Query: 250 HGVSLGIFREMVNDGMV--FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR 307
+LG+F M +G+ FP ++ VL C L +L G+++H ++ + Y
Sbjct: 316 DLEALGLFARMQREGVALNFP---SMISVLSVCASLASLDHGRQVHARLVRSEFDQDLY- 371
Query: 308 SAGAALLTLYAR 319
+ L+T+Y +
Sbjct: 372 -VASVLITMYVK 382
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDE--MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
S + Y + GD+ A +VFD + +R + SWN+M+S Y + + A+ + + M
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM---- 78
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
+ + V+ N ++ Y + G+V++A KVF+ + + NV+SWT+++ GY G + +F
Sbjct: 79 PQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 259 EM 260
EM
Sbjct: 139 EM 140
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L C++ SL+ +Q+H ++ + + + LI +Y C DL A +F +
Sbjct: 340 SVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK 399
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + S++ +S+HGL + + + +M GV PD F VL AC+ + E
Sbjct: 400 DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIF 459
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSC---YVC 180
+ ++D+ + G V+ A + ++M E D W +++ ++
Sbjct: 460 EAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMK 519
Query: 181 NGLSQRAVEVLESMRVDGCEPDVV 204
L++ AVE L + P V+
Sbjct: 520 LDLAEVAVEKLAKLEPKNAGPYVL 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N+++ Y + A +FD+M +R+ S+N M+S YV NG+ A +V + M E
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVM----PE 111
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
+VV+ +++ Y + G+V EA K+F ++ NV+SWT +I G
Sbjct: 112 RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGG 154
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 37/268 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L CS K L K +H ++L + + F ++ ++ +Y C ++R A ++ +
Sbjct: 264 LASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIG 323
Query: 63 QPNVFAFTSILAFHSRHG----------------------------LARQCIETYAEMRF 94
+ FA +S++ +S G ++QC E + R
Sbjct: 324 IKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFR- 382
Query: 95 KGVS-----PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
K V+ PD + +VL ACA A L D ++ ++++DMYSK
Sbjct: 383 KFVTREELIPDAMIIIRVLGACAT-QATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSK 441
Query: 150 CGDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
CG++ A + F M R+RDV +N M++ Y +G +A+++ M +PD VT
Sbjct: 442 CGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFV 501
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVI 235
++ A GLV + F ++D +V+
Sbjct: 502 ALLSACRHRGLVEQGEIFFISMEDYSVL 529
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 123/297 (41%), Gaps = 69/297 (23%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS-ILAFHSRHGL--ARQCIET---- 88
F +LI +Y+ L+ AH LF ++P PN +++ + I+A+ L AR ++
Sbjct: 28 FTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDR 87
Query: 89 ----YAEMRFKGVSPDGY------VFPKV-------------LKACAQLAALLEXX-XXX 124
Y M V DGY +F K+ L +A L
Sbjct: 88 DLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGK 147
Query: 125 XXXXXXXXXXXDLR--VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL +S+++MYSKCG +F RD +C V +G
Sbjct: 148 QMHSYMVKTASDLSKFASSSLINMYSKCG-------LF-----RD--------ACSVVSG 187
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN-VISWTTLI 241
DG D+V++N ++ A CR G + A VF + + N +SW TLI
Sbjct: 188 F-------------DGV-VDLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLI 233
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+GY+ G +L +F +M G+ F D L+ VL C L L GK +H + LK
Sbjct: 234 AGYAQNGYMDKALALFVKMTERGVRF-DEHTLASVLSVCSGLKHLKLGKCVHAWVLK 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 123/313 (39%), Gaps = 69/313 (22%)
Query: 20 KQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSL---------------------- 57
KQ+H YM+ S F ++ LI +Y+ C R A S+
Sbjct: 147 KQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCR 206
Query: 58 -----------FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPK 106
++ + ++ +++A ++++G + + + +M +GV D +
Sbjct: 207 EGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLAS 266
Query: 107 VLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER 166
VL C+ L L + + + + ++D+Y KCG++ A V+ + +
Sbjct: 267 VLSVCSGLKHL-KLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIK 325
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
F+ +S++ Y G E M+ A ++F
Sbjct: 326 SQFAVSSLIVGYSSQG---------EMMK--------------------------AQRLF 350
Query: 227 EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+ + + N + WT L SGY+ + +FR+ V + PDA + VL +C L
Sbjct: 351 DSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATL 410
Query: 287 ASGKEIHGYGLKI 299
+ GK+IH Y L++
Sbjct: 411 SLGKQIHTYILRM 423
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 56/332 (16%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++++AC S + + +H ++ G+ ++Q Y C + A +F + P+
Sbjct: 114 AVMKACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPER 173
Query: 65 NVFAFTSIL----------AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
N +IL +F L R C G+ +L A +
Sbjct: 174 NDLVSWNILMGGCVLVSDYSFVFDLFLKRGC---------SGIRASVATTLSLLSAAGDI 224
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
+ + +L V +++DMY+K G + A +VFD + E+DV WN +
Sbjct: 225 GSFV-LGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCL 283
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEP--------------------------------- 201
+ Y + L + AV +L+SMR +G +P
Sbjct: 284 IKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKL 343
Query: 202 --DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
DV+ ++D Y + G + EA ++FE++++ +V SWT +ISG+ G+ ++ +F
Sbjct: 344 ELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNR 403
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
M N+G P+ +L +C G + G E
Sbjct: 404 MENEGFR-PNEITFLAILTACSHGGLVTEGVE 434
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ L A + K++ + Q H YM+ PF +KL+ A D+ A ++F +
Sbjct: 13 FHKLTLALKSCKTITEIHQFHCYMIKTSLTNVPFTLSKLLA--ASIFDMNYASTIFTCIQ 70
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ-LAALLEXX 121
PN+F + ++L +S + + + + ++R G D + F V+KAC +
Sbjct: 71 NPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMKACGRSFEVGFGRG 130
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYV- 179
DL N++L Y CG ++ A +VFDE ER D+ SWN +M V
Sbjct: 131 VHGIVVKSGNRFFVDLN--NTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVL 188
Query: 180 ---------------CNGLSQRAVEVLESMRVDG---------------------CEPDV 203
C+G+ L + G C +V
Sbjct: 189 VSDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNV 248
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
VT ++D Y + G + A KVF+ + + +V+ W LI Y+ ++ + + M +
Sbjct: 249 VT--ALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQE 306
Query: 264 GMVFPDAGALSGVL 277
G V P++ L G+L
Sbjct: 307 G-VKPNSSTLVGLL 319
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 10/291 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL A S K LH Y + G T LI +YA + A +F + +
Sbjct: 216 SLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEK 275
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + ++ ++R L + + MR +GV P+ +L + ++ +
Sbjct: 276 DVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSM-QGVRYV 334
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + +++D+Y+KCG ++ A +F+ M +DV SW +++S + +G +
Sbjct: 335 TSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQA 394
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
A+ + M +G P+ +T ++ A GLV+E + F+++ P V +
Sbjct: 395 INAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGC 454
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
LI +GR G+ F E++ + DA + +L +CR G + G+
Sbjct: 455 LI---DLLGRAGMLHEAF-ELIKSLPIKGDATSWRTLLSACRVHGDVKLGE 501
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------- 202
D+ A+ +F ++ ++F +N+M+ Y + S +A+ + +R G D
Sbjct: 58 DMNYASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMK 117
Query: 203 --------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPN-VI 235
V NT++ YC G + +A KVF++ + N ++
Sbjct: 118 ACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLV 177
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SW L+ G V + +F + G+ A LS +L + +G+ GK +HGY
Sbjct: 178 SWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLS-LLSAAGDIGSFVLGKSLHGY 236
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
+KI G + AL+ +YA+
Sbjct: 237 CIKI--GFCCNLNVVTALIDMYAK 258
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLF----RQLPQPNVFAFTSILAFHSRHGLARQCIET 88
R + +I Y+ ++ A +F ++ +PN+ ++ ++A GL + +
Sbjct: 27 RDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRL 86
Query: 89 YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+ EM +G PDG VL L +L D V +++LDMY
Sbjct: 87 FHEMVSEGFLPDGSTVSCVLPGVGNLEDVL-MGKQVHGYVIKLGLESDKYVVSALLDMYG 145
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
+CG +RVFDE+ + ++ S N+ ++ NGL A++V + + E +VVT
Sbjct: 146 RCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVT--- 202
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
WT++I+ G+ +L +FR+M DG V P
Sbjct: 203 ----------------------------WTSIIASCVQNGKDMEALELFRDMQADG-VEP 233
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+A + ++ +C + AL GKEIH + L+ + Y G+AL+ +YA
Sbjct: 234 NAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVY--VGSALIDMYAN 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 20/260 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ SL+ AC +L K++H + L G + + LI +YA+C +R + + F ++P
Sbjct: 238 IPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMP 297
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ ++ SI++ ++ HG A++ IE + M G PD F VL AC Q E
Sbjct: 298 FRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWH 357
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM-SCYVC 180
+ ++ + S+ G +E A + EM E D W +++ SC V
Sbjct: 358 YFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVH 417
Query: 181 NGLS--QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV---- 234
+ LS + A E L + D ++ N Y G+ E ++V + +K +
Sbjct: 418 HNLSLGEIAAEKLFVLEPDNPGNYILLSNI----YASKGMWDEENRVRDMMKSKGLQKNP 473
Query: 235 -ISWT-------TLISGYSS 246
SW TL+SG S
Sbjct: 474 GCSWIEIGHRVHTLVSGDKS 493
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 34/179 (18%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
+S++ MY KC ++ A ++FD M +RDV W++M++ Y G RA EV MR +G E
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
P++V+ N ++ + +GL EA + +F EM
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVR-------------------------------LFHEM 90
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V++G + PD +S VL L + GK++HGY +K+ G + +ALL +Y R
Sbjct: 91 VSEGFL-PDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKL--GLESDKYVVSALLDMYGR 146
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 122/257 (47%), Gaps = 10/257 (3%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
++R A +F ++P+ +V +++S++ + ++G +E + MR KG+ P+ + +L
Sbjct: 195 EVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLS 254
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
A AQL LL + + ++DMY+KCG +E + +FD M ERD++
Sbjct: 255 ASAQLG-LLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIW 313
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
+W M+ + ++ A+ + +G P V V++A R GLVSE F+ +
Sbjct: 314 TWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLM 373
Query: 230 KD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
D P + + ++ ++ G ++ + M V PD + +L +C G
Sbjct: 374 VDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMT----VEPDPVMWATLLDACEIHG 429
Query: 285 ALASGKEIHGYGLKIMP 301
+ G++I +K+ P
Sbjct: 430 FVEMGEKIGNKLIKMDP 446
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 142/374 (37%), Gaps = 81/374 (21%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ + + +LNQ KQ H ++L G + L + L + S+F +
Sbjct: 8 IKPIFPSLPKQPTLNQIKQTHAKIILSGQSQSRLTIHILSLLSLSTSPLNYSLSIFNSIS 67
Query: 63 QPNVFAFTSILAFHSR-HGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC---------- 111
V AF SI+ H++ + + Y+ MR + ++ + + F +L AC
Sbjct: 68 SQTVLAFNSIIRIHAKSNSSPSNSLSLYSSMRRRFLNANQHTFTFLLHACTKGKDCFNIV 127
Query: 112 ----------------------AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS- 148
A + E D VC+ V+ S
Sbjct: 128 SGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVD-EVCSDVVTWNSM 186
Query: 149 -----KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD- 202
+ G+V A ++FDEM +RDV SW+SM+ YV NG + +E MR G P+
Sbjct: 187 LAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNE 246
Query: 203 ----------------------------------VVTRNTVMDAYCRMGLVSEASKVFEQ 228
V ++D Y + G + E+ +F+
Sbjct: 247 SILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDG 306
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS 288
+ + ++ +WT +I G +S R +L +FRE + +G P GVL +C G ++
Sbjct: 307 MMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFR-PVNVIFVGVLNACSRAGLVSE 365
Query: 289 GKE-----IHGYGL 297
G+ + GYG+
Sbjct: 366 GRYYFKLMVDGYGI 379
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 59/309 (19%)
Query: 2 HLNSLLQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA-DCDDLRSAHSLFR 59
+LN L+ + LNQ KQL ++ G + F+ KLI+ + + +L AH +F
Sbjct: 4 NLNELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFN 63
Query: 60 QLPQPNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ--LAA 116
+ PN++ FT+I+ AF S+ + +T M + P+ +++P VLK+ + L
Sbjct: 64 HIHSPNIYLFTAIITAFSSQQHTTFKLFKT---MLNSNIRPNNFIYPHVLKSVKERFLVD 120
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC-GDVEGAARVFDEMRERDVFSWNSMM 175
L+ V S++D YSK G + A +VFDEM ER++ + ++
Sbjct: 121 LVHAQIVKCGFLNYPV------VETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLV 174
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
S Y R+G V + VF+++ D +V
Sbjct: 175 S-----------------------------------GYLRVGDVEKGLMVFDEMVDRDVP 199
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMV-----NDGMV----FPDAGALSGVLVSCRCLGAL 286
+W +ISG + G + +FREMV +G P+ + VL +C G L
Sbjct: 200 AWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGML 259
Query: 287 ASGKEIHGY 295
GK IHGY
Sbjct: 260 QLGKWIHGY 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 22/271 (8%)
Query: 31 SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
S R T L+ Y D+ +F ++ +V A+ ++++ +++G + I +
Sbjct: 163 SERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFR 222
Query: 91 EMRF----------KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
EM F KG P+ VL AC +L+ D V
Sbjct: 223 EMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGH-GGMLQLGKWIHGYVYRHGFVVDSFVS 281
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV--DG 198
N+++DMY KCG +E A +VF+ + + + SWNSM++CY +G + A+ E M G
Sbjct: 282 NALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGG 341
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVISWTTLISGYSSVGRHGVS 253
PD VT +++A GLV + FE + +P + + LI G+ +
Sbjct: 342 VRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEA 401
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+ + + M + PD +L C+ G
Sbjct: 402 MDVVKGMSME----PDEVVWGSLLNGCKVHG 428
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 6/229 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC L K +H Y+ HG F + L+ +Y C L A +F +
Sbjct: 249 VLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKG 308
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMR--FKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ S++ ++ HG I + +M GV PD F +L AC + +
Sbjct: 309 LTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGY 368
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNG 182
+ ++D+ + G + A V M E D W S+++ +G
Sbjct: 369 FEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHG 428
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIK 230
+ A + ++ +P T++ + Y ++G E V+ ++K
Sbjct: 429 RTDLA--EFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLK 475