Miyakogusa Predicted Gene

Lj0g3v0235839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0235839.1 tr|I1LJE3|I1LJE3_SOYBN Coatomer subunit gamma
OS=Glycine max PE=3 SV=1,93.22,0,ARM repeat,Armadillo-type fold; no
description,Armadillo-like helical; Adaptin_N,Clathrin/coatomer
a,CUFF.15760.1
         (585 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g116480.1 | coatomer subunit gamma-like protein | HC | chr...  1102   0.0  
Medtr4g069920.1 | coatomer subunit gamma-like protein | HC | chr...  1056   0.0  
Medtr4g008250.1 | coatomer subunit beta | HC | chr4:1470907-1476...    63   6e-10

>Medtr3g116480.1 | coatomer subunit gamma-like protein | HC |
           chr3:54482735-54492107 | 20130731
          Length = 887

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/575 (92%), Positives = 548/575 (95%)

Query: 1   MAQPFMKKDDDRDDEVEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60
           MAQP +KKDDDRDDE EYSPF+GIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG
Sbjct: 1   MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120
           ETFTK EATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID
Sbjct: 61  ETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120

Query: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALISGIHLLHTNPEIVKRWS 180
           MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNP+VASAAL+SGIHLL TNPEIVKRWS
Sbjct: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWS 180

Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPIAQCLLIRYTSQ 240
           NEVQE+VQSRAA VQFHAL LLHQIRQNDRLAVSKLV+SLTRG VRSP+AQCLLIRYTSQ
Sbjct: 181 NEVQESVQSRAAFVQFHALGLLHQIRQNDRLAVSKLVSSLTRGAVRSPLAQCLLIRYTSQ 240

Query: 241 VIRESGNNTQTGDRPFYDFLESCLRHKSEMVIFESARAITELNGVTSRELAPAITVLQLF 300
           VI ESGNNTQ+GDRPFYDFLESCLRHKSEMVIFE+ARAITELNGVTSREL PAITVLQLF
Sbjct: 241 VICESGNNTQSGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTSRELNPAITVLQLF 300

Query: 301 LSSSKPVLRFAAVRTLNKVAMTHPMSVTNCNIDMESLISDQNRSXXXXXXXXXXKTGNES 360
           LSSSKPVLRFAAVRTLNKVAM HP SVTNCNIDMESLISDQNRS          KTGNES
Sbjct: 301 LSSSKPVLRFAAVRTLNKVAMIHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNES 360

Query: 361 SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKK 420
           SVDRLMKQITNFMSDIADEFKIVVVEAIRSLC KFPLKYRSLMNFLSNILREEGGF+YKK
Sbjct: 361 SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKK 420

Query: 421 AIVDSIVILIRDIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRF 480
           AIVDSIVILIR+IPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRF
Sbjct: 421 AIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRF 480

Query: 481 IYNRVHLENATVRASAVSTLARFGAAVDEIKPRIFVLLRRCLFDSDDEVRDRATLYLNTL 540
           IYNRVHLENATVRA AVSTLA+FGAAVDE+KPRIFVLLRRCLFDSDDEVRDRATLYLNTL
Sbjct: 481 IYNRVHLENATVRAGAVSTLAKFGAAVDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTL 540

Query: 541 GDDGSVVETDKDVNDFLFGPFDIPLVNLESSLKNY 575
           G DGSVVETDK V DFLFGPFDIPLVNLE+ LKNY
Sbjct: 541 GGDGSVVETDKAVKDFLFGPFDIPLVNLETGLKNY 575


>Medtr4g069920.1 | coatomer subunit gamma-like protein | HC |
           chr4:26297688-26305339 | 20130731
          Length = 885

 Score = 1056 bits (2730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/575 (90%), Positives = 543/575 (94%), Gaps = 3/575 (0%)

Query: 1   MAQPFMKKDDDRDDEVEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60
           MAQP +KKDDDRDDE  YSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG
Sbjct: 1   MAQPLIKKDDDRDDEDNYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQG 60

Query: 61  ETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKID 120
           ETFTKVEATEVFF+VTKLFQS+D+GLRRMVYL+IKE+SPSADEVIIVTSSLMKDMNSK D
Sbjct: 61  ETFTKVEATEVFFSVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD 120

Query: 121 MYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALISGIHLLHTNPEIVKRWS 180
           MYRANAIRVLCRITDGTLL QIERYLKQAIVDKNPVVASAAL+SGIHLL TNPEIVKRWS
Sbjct: 121 MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWS 180

Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPIAQCLLIRYTSQ 240
           NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRG+VRSP+AQCLLIRYTSQ
Sbjct: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTSQ 240

Query: 241 VIRESGNNTQTGDRPFYDFLESCLRHKSEMVIFESARAITELNGVTSRELAPAITVLQLF 300
           VIRESGN TQ+G+RPFYDFLESCLRHKSEMVIFE+A+AIT+LNGVTSREL PAITVLQLF
Sbjct: 241 VIRESGNITQSGERPFYDFLESCLRHKSEMVIFEAAKAITDLNGVTSRELTPAITVLQLF 300

Query: 301 LSSSKPVLRFAAVRTLNKVAMTHPMSVTNCNIDMESLISDQNRSXXXXXXXXXXKTGNES 360
           LSSSKPVLRFAAVRTLNKVAMTHPM+VTNCNIDMESLISDQNRS          KTGNES
Sbjct: 301 LSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNES 360

Query: 361 SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKK 420
           SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKK
Sbjct: 361 SVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKK 420

Query: 421 AIVDSIVILIRDIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRF 480
           AIVDSIVILIRDIPDAKE+GLLHLCEFIEDCEFTYLSTQILHFLGIEGPKT DPSKYIR+
Sbjct: 421 AIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTLDPSKYIRY 480

Query: 481 IYNRVHLENATVRASAVSTLARFGAAVDEIKPRIFVLLRRCLFDSDDEVRDRATLYLNTL 540
           IYNRVHLENATVRASAVSTLA+FGA+VD +KPRIFVLLRRCLFDSDDEVRDRATLYLNTL
Sbjct: 481 IYNRVHLENATVRASAVSTLAKFGASVDGLKPRIFVLLRRCLFDSDDEVRDRATLYLNTL 540

Query: 541 GDDGSVVETDKDVNDFLFGPFDIPLVNLESSLKNY 575
           G D    E D D  DFLFG  DIPLVNLE+SLK Y
Sbjct: 541 GGD---TEIDNDAKDFLFGSLDIPLVNLETSLKKY 572


>Medtr4g008250.1 | coatomer subunit beta | HC | chr4:1470907-1476142
           | 20130731
          Length = 951

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 182/411 (44%), Gaps = 49/411 (11%)

Query: 48  QVITKLLYLLNQGETFTKVEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSAD----- 102
           + + K + LL  GET  ++  T + + +T      D  +++++ L + EI+   D     
Sbjct: 36  EALKKAIMLLLNGETIPQLFITVIRYVLT----CDDHTVQKLLLLYL-EITDKTDSRGKV 90

Query: 103 --EVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDG--------TLLAQIERYLKQAIVD 152
             E+I++  +L  ++ S  +  R   +R LCRI +         ++L+ +E   +   V 
Sbjct: 91  LPEMILICQNLRNNLQSPNEFIRGVTLRFLCRINESEIVEPLIPSILSNLEH--RHPFVR 148

Query: 153 KNPVVASAA---LISGIHLLHTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQND 209
           +N V+A  +   L  G  LL + PEIV+++    Q+A   R A +   + A        D
Sbjct: 149 RNAVLAVMSVYKLPQGEQLLDSAPEIVEKFLVSEQDASSKRNAFLMLFSCA-------QD 201

Query: 210 RLAVSKLVTSLTRGTVRSPIAQCLLIRYTSQVIRESGNNTQTGDRPFYDFLESCLRHKSE 269
           R AV+ L T++ R        Q +++    +V R   N  + G   +   + S L   S 
Sbjct: 202 R-AVNYLFTNIDRIIDWGEQLQMVVLELIKKVCR--NNKGEKG--KYIKIIISLLSANST 256

Query: 270 MVIFESARAITELNGVTSRELAPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMSVTN 329
            V++E A  +  L+   +   A A T  QL LS S   ++   +  LN++   +   + +
Sbjct: 257 AVVYECAGTLVSLSSAPTAIKAAANTYCQLLLSQSDNNVKLIVLDRLNELKRDNREIMVD 316

Query: 330 CNIDMESLISDQNRSXXXXXXXXXXKTGNESSVDR----LMKQITNFMS---DIADEFKI 382
             +D+   +S  N            +     ++D+    L K++    S   +   E++ 
Sbjct: 317 MVMDVLRALSTPNHDIRRKTIDIALELITPKNIDQVVMMLKKEVVKTQSGEHEKNGEYRQ 376

Query: 383 VVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDI 433
           ++V+AI +  +KFP    ++++ L + L   G  +   A+   +V+ +R+I
Sbjct: 377 MLVQAIHTCAIKFPEVASTVVHLLMDFL---GDTNVASAM--DVVVFVREI 422