Miyakogusa Predicted Gene

Lj0g3v0234779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234779.1 Non Characterized Hit- tr|I1DV26|I1DV26_9GAMM
Uncharacterized protein OS=Rheinheimera nanhaiensis E4,25.33,2.5,
,CUFF.15353.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022320.1 | peptidyl serine alpha-galactosyltransferase | ...    61   6e-10

>Medtr6g022320.1 | peptidyl serine alpha-galactosyltransferase | HC
           | chr6:7788998-7780243 | 20130731
          Length = 972

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 10  VYTARILASLEDG-DAWWDLPAEVVPTIAGGIQASPALLGYGRRETLTAEKRAFL 63
           VY  R+ ASLE G D WW+ P+E+ P IAGG++ S A +GYG  E L+ ++R  L
Sbjct: 677 VYEVRMFASLEGGKDIWWNFPSEIQPVIAGGLRLSLACIGYGSCENLSCDQRYLL 731