Miyakogusa Predicted Gene

Lj0g3v0234039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234039.1 Non Characterized Hit- tr|I3T494|I3T494_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,71.93,9e-17,seg,NULL; DNase-RNase,Bifunctional nuclease;
Hypothetical protein TM0160,Bifunctional nuclease,CUFF.15382.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g112160.1 | wound-responsive family protein | HC | chr3:52...   515   e-146
Medtr1g022485.1 | nuclease in basal defense response protein | H...   456   e-128
Medtr3g112160.2 | wound-responsive family protein | HC | chr3:52...   340   1e-93
Medtr5g023110.2 | wound-responsive family protein | HC | chr5:91...   115   4e-26
Medtr5g023110.3 | wound-responsive family protein | HC | chr5:91...   115   4e-26
Medtr5g023110.1 | wound-responsive family protein | HC | chr5:91...   115   4e-26

>Medtr3g112160.1 | wound-responsive family protein | HC |
           chr3:52496109-52492599 | 20130731
          Length = 325

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 255/325 (78%), Positives = 275/325 (84%), Gaps = 7/325 (2%)

Query: 8   VVCLAKVAGSCSVSMPMIGSMN---SRTEFWXXXXXXXXXXXXXXXXXHVNMRRCMTV-H 63
           +VC+ K +  CSV+MPMIG +N   SR E W                 HVNMR+C TV +
Sbjct: 4   MVCV-KGSAMCSVAMPMIGPINAGCSRIELWGFSASNKIKPNSLSC--HVNMRKCRTVMN 60

Query: 64  CXXXXXXXXXXXMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDGRHVRCIHNNPQ 123
           C           MAENFN+NDEDYVNS+I+EAVEVKSGADGF++KMRDGRH+RC+HN+P 
Sbjct: 61  CSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCVHNSPH 120

Query: 124 GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID 183
           GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID
Sbjct: 121 GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID 180

Query: 184 KMGYQVRAVRVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKY 243
           KMGY+VRAVRVTKRV EAYFAQIYLSKVGNE EC+SFDLRPSDAINIAVRCKVPIQVNKY
Sbjct: 181 KMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRCKVPIQVNKY 240

Query: 244 LAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQ 303
           LAYSDGMRVIESGKLSTQSPGSDGPLFTELDRP+ KPC ETKEFNLL NM+ AV EERYQ
Sbjct: 241 LAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPNGKPCVETKEFNLLHNMLTAVVEERYQ 300

Query: 304 DAALWRDKLNQLRAGKKANNRSWTL 328
           DAALWRD+LNQ RA KKANNRSWTL
Sbjct: 301 DAALWRDQLNQFRAEKKANNRSWTL 325


>Medtr1g022485.1 | nuclease in basal defense response protein | HC |
           chr1:7218807-7215469 | 20130731
          Length = 359

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/332 (68%), Positives = 259/332 (78%), Gaps = 14/332 (4%)

Query: 1   MGSLKGPVVCLA---KVAGSCSVSMPMIGSMNSR---TEFWXXXXXXXXXXXXXXXXXHV 54
           M SLKGPV C +   KVAG C+  +P+IG MN R   TEFW                 H+
Sbjct: 35  MASLKGPVACPSIHPKVAGFCT--LPLIGPMNVRCVKTEFWGLKEFKRSFLSY-----HI 87

Query: 55  NMRRCMTV-HCXXXXXXXXXXXMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDGR 113
           N R+  TV HC           MAE+FN+ DEDYV+SS++EAVEVKSGADGF+IKMRDG+
Sbjct: 88  NTRKSKTVVHCSLNSPSNDGGSMAESFNEKDEDYVSSSVIEAVEVKSGADGFIIKMRDGK 147

Query: 114 HVRCIHNNPQGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPT 173
           H+RC+HNNPQGG LPDY+PHPA+VLKMEDG+ LLLPIIVLEMPSVLL+AAVRNV IARPT
Sbjct: 148 HLRCVHNNPQGGHLPDYSPHPAMVLKMEDGSDLLLPIIVLEMPSVLLLAAVRNVSIARPT 207

Query: 174 LYQVVKEMIDKMGYQVRAVRVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVR 233
           LY+VV EMI KMGYQV+ VRVT+RV EAYFAQ+YL+KVGNE EC SFDLRPSDAINIAVR
Sbjct: 208 LYEVVMEMIGKMGYQVKLVRVTRRVDEAYFAQLYLTKVGNEAECRSFDLRPSDAINIAVR 267

Query: 234 CKVPIQVNKYLAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENM 293
           CKVPIQVNKYLA SDGMRVIESGKL TQ P  DG LFTE+D+P+ +PC ET EFNLL NM
Sbjct: 268 CKVPIQVNKYLASSDGMRVIESGKLPTQIPSFDGRLFTEMDKPNGQPCAETDEFNLLNNM 327

Query: 294 MKAVGEERYQDAALWRDKLNQLRAGKKANNRS 325
           +KAV EERY DAALWRD+LNQ RAGK    RS
Sbjct: 328 LKAVDEERYDDAALWRDRLNQHRAGKNMKKRS 359


>Medtr3g112160.2 | wound-responsive family protein | HC |
           chr3:52496109-52492711 | 20130731
          Length = 235

 Score =  340 bits (871), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 172/232 (74%), Positives = 189/232 (81%), Gaps = 7/232 (3%)

Query: 8   VVCLAKVAGSCSVSMPMIGSMN---SRTEFWXXXXXXXXXXXXXXXXXHVNMRRCMTV-H 63
           +VC+ K +  CSV+MPMIG +N   SR E W                 HVNMR+C TV +
Sbjct: 4   MVCV-KGSAMCSVAMPMIGPINAGCSRIELWGFSASNKIKPNSLSC--HVNMRKCRTVMN 60

Query: 64  CXXXXXXXXXXXMAENFNQNDEDYVNSSIVEAVEVKSGADGFLIKMRDGRHVRCIHNNPQ 123
           C           MAENFN+NDEDYVNS+I+EAVEVKSGADGF++KMRDGRH+RC+HN+P 
Sbjct: 61  CSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCVHNSPH 120

Query: 124 GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID 183
           GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID
Sbjct: 121 GGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTLYQVVKEMID 180

Query: 184 KMGYQVRAVRVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCK 235
           KMGY+VRAVRVTKRV EAYFAQIYLSKVGNE EC+SFDLRPSDAINIAVRCK
Sbjct: 181 KMGYEVRAVRVTKRVQEAYFAQIYLSKVGNESECMSFDLRPSDAINIAVRCK 232


>Medtr5g023110.2 | wound-responsive family protein | HC |
           chr5:9180372-9183953 | 20130731
          Length = 326

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 7/191 (3%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIAR-PTLYQVVKEMIDKMGYQVRAV 192
           P I LK+      +LPI+V ++    L+ A    +I   P  +Q V  +++++ ++V  V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 253 -IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDK 311
               G++  +    D  L + +D P     +  +E +++ NM  A+ +ER+ DAA WR+K
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPD----SVAQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 312 LNQLRAGKKAN 322
           L  LR   + +
Sbjct: 316 LENLRKSSQEH 326


>Medtr5g023110.3 | wound-responsive family protein | HC |
           chr5:9180345-9183958 | 20130731
          Length = 326

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 7/191 (3%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIAR-PTLYQVVKEMIDKMGYQVRAV 192
           P I LK+      +LPI+V ++    L+ A    +I   P  +Q V  +++++ ++V  V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 253 -IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDK 311
               G++  +    D  L + +D P     +  +E +++ NM  A+ +ER+ DAA WR+K
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPD----SVAQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 312 LNQLRAGKKAN 322
           L  LR   + +
Sbjct: 316 LENLRKSSQEH 326


>Medtr5g023110.1 | wound-responsive family protein | HC |
           chr5:9180345-9184014 | 20130731
          Length = 326

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 7/191 (3%)

Query: 134 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIAR-PTLYQVVKEMIDKMGYQVRAV 192
           P I LK+      +LPI+V ++    L+ A    +I   P  +Q V  +++++ ++V  V
Sbjct: 141 PTIFLKISCDGDYVLPIVVGKIAIEKLIDAEVEQEIEDWPDQFQFVNNLVERLDHEVIMV 200

Query: 193 RVTKRVHEAYFAQIYLSKVGNEEECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 252
           R+T+RV   YFA++YLS+ G + + +S DLRPSDAIN+A +CK PI V+K + ++D +R+
Sbjct: 201 RITERVVSTYFARLYLSQPG-KSDIISVDLRPSDAINVANKCKAPIYVSKEIVFTDAIRL 259

Query: 253 -IESGKLSTQSPGSDGPLFTELDRPSNKPCTETKEFNLLENMMKAVGEERYQDAALWRDK 311
               G++  +    D  L + +D P     +  +E +++ NM  A+ +ER+ DAA WR+K
Sbjct: 260 GYGMGRVHNKKAIYDVLLDSAIDGPD----SVAQELSMMHNMHLAIKQERFNDAATWRNK 315

Query: 312 LNQLRAGKKAN 322
           L  LR   + +
Sbjct: 316 LENLRKSSQEH 326