Miyakogusa Predicted Gene

Lj0g3v0233739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0233739.1 Non Characterized Hit- tr|Q93X02|Q93X02_LOTJA
Putative ammonium transporter AMT2 OS=Lotus japonicus
,100,0,AMMONIUM_TRANSP,Ammonium transporter, conserved site; no
description,Ammonium transporter AmtB-like;,CUFF.15279.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069640.1 | ammonium transporter 1 protein | HC | chr7:256...   177   2e-45
Medtr4g017820.1 | ammonium transporter 1 protein | HC | chr4:562...   176   4e-45
Medtr8g095040.1 | ammonium transporter 1 protein | HC | chr8:397...   158   8e-40
Medtr1g036410.1 | ammonium transporter 1 protein | HC | chr1:133...   138   9e-34
Medtr7g115050.1 | ammonium transporter 1 protein | HC | chr7:475...   132   6e-32
Medtr8g074750.1 | ammonium transporter 1 protein | HC | chr8:316...   125   7e-30

>Medtr7g069640.1 | ammonium transporter 1 protein | HC |
           chr7:25671858-25666388 | 20130731
          Length = 487

 Score =  177 bits (449), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/87 (96%), Positives = 87/87 (100%)

Query: 1   MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSS 60
           MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFS+WGGGFLYHWGVID+SGGYVIHLSS
Sbjct: 146 MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSS 205

Query: 61  GIAGFTAAYWVGPRLKSDRERFPPNNV 87
           GIAGFTAAYWVGPR+KSDRERFPPNNV
Sbjct: 206 GIAGFTAAYWVGPRIKSDRERFPPNNV 232


>Medtr4g017820.1 | ammonium transporter 1 protein | HC |
           chr4:5625778-5621961 | 20130731
          Length = 487

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/87 (96%), Positives = 86/87 (98%)

Query: 1   MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSS 60
           +ILLAGSVLGRMNI+AWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSS
Sbjct: 145 VILLAGSVLGRMNIRAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSS 204

Query: 61  GIAGFTAAYWVGPRLKSDRERFPPNNV 87
           GI GFTAAYWVGPRLKSDRERFPPNNV
Sbjct: 205 GIGGFTAAYWVGPRLKSDRERFPPNNV 231


>Medtr8g095040.1 | ammonium transporter 1 protein | HC |
           chr8:39727091-39724297 | 20130731
          Length = 485

 Score =  158 bits (400), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 72/87 (82%), Positives = 80/87 (91%)

Query: 1   MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSS 60
           +++LAGSVL RMN KAWM FVPLWL FSYT+GAFS+WGGGFL+ WGV+D+SGGYVIHLSS
Sbjct: 152 LVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSS 211

Query: 61  GIAGFTAAYWVGPRLKSDRERFPPNNV 87
           GIAGFTAAYWVGPR K DRERFPPNNV
Sbjct: 212 GIAGFTAAYWVGPRSKKDRERFPPNNV 238


>Medtr1g036410.1 | ammonium transporter 1 protein | HC |
           chr1:13350444-13347344 | 20130731
          Length = 481

 Score =  138 bits (348), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 73/87 (83%), Gaps = 1/87 (1%)

Query: 1   MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSIWG-GGFLYHWGVIDFSGGYVIHLS 59
           +IL+AG+VLGRMN  AWM FVPLWL FSYT  AFSIW   GFL   G+ID+SGGYVIHLS
Sbjct: 129 LILIAGAVLGRMNFYAWMMFVPLWLTFSYTFTAFSIWSTNGFLAKMGIIDYSGGYVIHLS 188

Query: 60  SGIAGFTAAYWVGPRLKSDRERFPPNN 86
           SG+AGFTAAYWVGPRL  DRERFPPNN
Sbjct: 189 SGVAGFTAAYWVGPRLNKDRERFPPNN 215


>Medtr7g115050.1 | ammonium transporter 1 protein | HC |
           chr7:47501145-47503452 | 20130731
          Length = 480

 Score =  132 bits (332), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 81/97 (83%), Gaps = 3/97 (3%)

Query: 1   MILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSIWG-GGFLYHWGVIDFSGGYVIHLS 59
           +IL+AG++LGRMNI+AWM FVPLW+ FSYTV AFSIW   G+L   GVIDF+GGYVIHLS
Sbjct: 126 LILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLS 185

Query: 60  SGIAGFTAAYWVGPRLKSDRERFP--PNNVLLMLAGA 94
           +G+AGFTAAYWVGPR   DRE FP   NN++++LAGA
Sbjct: 186 AGVAGFTAAYWVGPRADKDRETFPAATNNMIMVLAGA 222


>Medtr8g074750.1 | ammonium transporter 1 protein | HC |
           chr8:31605622-31607883 | 20130731
          Length = 481

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 69/84 (82%), Gaps = 1/84 (1%)

Query: 11  RMNIKAWMAFVPLWLIFSYTVGAFSIWGGGFLYHWGVIDFSGGYVIHLSSGIAGFTAAYW 70
           RMN  AWM FVPLWL  SYTVGAF+IWG GFL    +ID++GG+VIHLSSG+AGFTAAYW
Sbjct: 146 RMNFYAWMLFVPLWLTLSYTVGAFTIWGNGFL-EGKIIDYAGGFVIHLSSGVAGFTAAYW 204

Query: 71  VGPRLKSDRERFPPNNVLLMLAGA 94
           VGPR  +DR+ FPPNN++ ML GA
Sbjct: 205 VGPRTSNDRQNFPPNNIIHMLGGA 228