Miyakogusa Predicted Gene

Lj0g3v0232329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0232329.1 Non Characterized Hit- tr|K4CYA4|K4CYA4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,56.15,6e-19,seg,NULL,CUFF.15244.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g024650.3 | GRF1-interacting factor-like protein | HC | ch...    86   1e-17
Medtr8g024650.1 | GRF1-interacting factor-like protein | HC | ch...    86   1e-17
Medtr8g024650.2 | GRF1-interacting factor-like protein | HC | ch...    86   1e-17

>Medtr8g024650.3 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 47/78 (60%)

Query: 1   MAPHPAMQQGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXXXXXXXXXXXX 60
           MAPHPAMQQGFYMQHP         GMFPQKMPMQFGNPH                    
Sbjct: 82  MAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQQQLHQQAMQ 141

Query: 61  XXMGLRPGGMNNGMHPMH 78
             MGLRPGG+NNGMHPMH
Sbjct: 142 GQMGLRPGGINNGMHPMH 159


>Medtr8g024650.1 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 47/78 (60%)

Query: 1   MAPHPAMQQGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXXXXXXXXXXXX 60
           MAPHPAMQQGFYMQHP         GMFPQKMPMQFGNPH                    
Sbjct: 82  MAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQQQLHQQAMQ 141

Query: 61  XXMGLRPGGMNNGMHPMH 78
             MGLRPGG+NNGMHPMH
Sbjct: 142 GQMGLRPGGINNGMHPMH 159


>Medtr8g024650.2 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 47/78 (60%)

Query: 1   MAPHPAMQQGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXXXXXXXXXXXX 60
           MAPHPAMQQGFYMQHP         GMFPQKMPMQFGNPH                    
Sbjct: 82  MAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQQQLHQQAMQ 141

Query: 61  XXMGLRPGGMNNGMHPMH 78
             MGLRPGG+NNGMHPMH
Sbjct: 142 GQMGLRPGGINNGMHPMH 159