Miyakogusa Predicted Gene

Lj0g3v0231969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231969.1 tr|G8A001|G8A001_MEDTR Cysteine proteinase
OS=Medicago truncatula GN=MTR_096s0016 PE=3
SV=1,68.9,0,Peptidase_C1,Peptidase C1A, papain C-terminal;
Inhibitor_I29,Proteinase inhibitor I29, cathepsin pro,gene.g18163.t1.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079440.1 | papain family cysteine protease | HC | chr4:30...   411   e-115
Medtr2g090890.1 | papain family cysteine protease | HC | chr2:39...   376   e-104
Medtr4g107930.1 | papain family cysteine protease | HC | chr4:44...   282   2e-76
Medtr4g047610.1 | papain family cysteine protease | HC | chr4:16...   276   1e-74
Medtr5g022560.1 | papain family cysteine protease | HC | chr5:88...   276   2e-74
Medtr3g075390.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |...   273   1e-73
Medtr1g107550.1 | papain family cysteine protease | HC | chr1:48...   269   2e-72
Medtr4g079470.1 | papain family cysteine protease | HC | chr4:30...   268   3e-72
Medtr4g079770.1 | papain family cysteine protease | HC | chr4:30...   267   8e-72
Medtr4g104370.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |...   265   2e-71
Medtr3g116080.1 | papain family cysteine protease | HC | chr3:54...   263   1e-70
Medtr4g080730.1 | papain family cysteine protease | HC | chr4:31...   262   2e-70
Medtr4g094918.1 | papain family cysteine protease | HC | chr4:39...   261   4e-70
Medtr2g075830.1 | papain family cysteine protease | HC | chr2:31...   261   5e-70
Medtr4g080700.1 | papain family cysteine protease | HC | chr4:31...   259   2e-69
Medtr4g080360.1 | papain family cysteine protease | HC | chr4:31...   259   3e-69
Medtr4g079800.1 | papain family cysteine protease | HC | chr4:30...   256   1e-68
Medtr1g018840.1 | papain family cysteine protease | HC | chr1:55...   254   7e-68
Medtr1g018840.2 | papain family cysteine protease | HC | chr1:55...   254   8e-68
Medtr3g102220.1 | papain family cysteine protease | HC | chr3:47...   250   1e-66
Medtr2g083930.1 | papain family cysteine protease | HC | chr2:35...   240   9e-64
Medtr3g112430.1 | papain family cysteine protease | HC | chr3:52...   235   4e-62
Medtr2g016180.1 | papain family cysteine protease | HC | chr2:48...   234   7e-62
Medtr2g016270.1 | papain family cysteine protease | HC | chr2:49...   225   4e-59
Medtr7g078600.1 | papain family cysteine protease | LC | chr7:29...   222   3e-58
Medtr7g079230.1 | papain family cysteine protease | LC | chr7:30...   218   8e-57
Medtr2g015850.1 | papain family cysteine protease | HC | chr2:47...   195   3e-50
Medtr4g065077.1 | papain family cysteine protease | HC | chr4:24...   193   2e-49
Medtr7g078630.1 | cysteine proteinase superfamily protein | LC |...   186   3e-47
Medtr2g067900.1 | papain family cysteine protease | LC | chr2:28...   181   7e-46
Medtr8g086470.1 | papain family cysteine protease | HC | chr8:35...   176   2e-44
Medtr2g015920.1 | papain family cysteine protease | LC | chr2:47...   170   2e-42
Medtr1g023210.1 | papain family cysteine protease | HC | chr1:73...   168   7e-42
Medtr4g125300.1 | papain family cysteine protease | HC | chr4:51...   167   1e-41
Medtr4g071060.1 | papain family cysteine protease | HC | chr4:26...   164   7e-41
Medtr1g094135.1 | papain family cysteine protease | HC | chr1:42...   162   2e-40
Medtr2g067560.1 | papain family cysteine protease | HC | chr2:28...   161   6e-40
Medtr2g064475.1 | papain family cysteine protease | LC | chr2:27...   157   7e-39
Medtr2g015930.1 | papain family cysteine protease | LC | chr2:47...   150   2e-36
Medtr2g066980.1 | papain family cysteine protease | LC | chr2:28...   143   2e-34
Medtr1g023810.1 | papain family cysteine protease | LC | chr1:76...   130   1e-30
Medtr1g025450.1 | papain family cysteine protease | LC | chr1:81...   125   5e-29
Medtr4g072790.1 | papain family cysteine protease | HC | chr4:27...   116   3e-26
Medtr4g073660.1 | papain family cysteine protease | HC | chr4:27...   113   2e-25
Medtr4g072340.1 | papain family cysteine protease | HC | chr4:27...   113   2e-25
Medtr2g015840.1 | papain family cysteine protease | LC | chr2:47...   100   1e-21
Medtr7g078310.1 | papain family cysteine protease | LC | chr7:29...   100   2e-21
Medtr2g047960.1 | papain family cysteine protease | LC | chr2:21...    84   1e-16
Medtr8g087510.1 | papain family cysteine protease | LC | chr8:36...    83   3e-16
Medtr3g029560.1 | papain family cysteine protease | LC | chr3:92...    72   5e-13
Medtr7g111050.2 | cathepsin B-like cysteine protease | HC | chr7...    64   2e-10
Medtr7g111050.1 | cathepsin B-like cysteine protease | HC | chr7...    63   4e-10
Medtr2g016380.1 | cysteine proteinase superfamily protein | HC |...    57   2e-08
Medtr7g111060.1 | cathepsin B-like cysteine protease | HC | chr7...    55   7e-08
Medtr7g078580.1 | papain family cysteine protease | HC | chr7:29...    51   1e-06

>Medtr4g079440.1 | papain family cysteine protease | HC |
           chr4:30713897-30712622 | 20130731
          Length = 345

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/283 (68%), Positives = 232/283 (81%), Gaps = 3/283 (1%)

Query: 1   MVSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNL 60
           M+ N  + +S SECPP HKQ SS++EAM+KRF+ W K+H R+Y++ +E +VRF IYQ N+
Sbjct: 15  MLCNTCVIASESECPPTHKQKSSDVEAMKKRFDGWVKRHGRKYKHNDEREVRFGIYQANV 74

Query: 61  EFIECINSQNNSYYLTDNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPES 120
           ++I+C N+Q NSY LTDNKFADLTNEEF+S Y+G      S N G   FRY  HGDLPES
Sbjct: 75  QYIQCKNAQKNSYNLTDNKFADLTNEEFQSTYMGLSTRLRSHNTG---FRYDEHGDLPES 131

Query: 121 VDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQG 180
            DWRK+GAVT I DQG CG CWAF+AVAAVEGI++IKSGKLISLSEQELIDCDV +GNQG
Sbjct: 132 KDWRKEGAVTEIMDQGQCGGCWAFAAVAAVEGINKIKSGKLISLSEQELIDCDVKSGNQG 191

Query: 181 CAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAML 240
           C GGLM+TA+TFI +NGGLTTE+DYPY+G DGTC  EKAAH+A +ISG+++VPA NEA L
Sbjct: 192 CQGGLMETAYTFIIENGGLTTEQDYPYEGVDGTCKMEKAAHYAASISGYEEVPADNEAKL 251

Query: 241 KAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           KAAAAHQPVSV IDAGG+ FQ YS GVFSG CGK+LNH VT+V
Sbjct: 252 KAAAAHQPVSVAIDAGGYSFQFYSEGVFSGICGKQLNHGVTVV 294


>Medtr2g090890.1 | papain family cysteine protease | HC |
           chr2:39022123-39020708 | 20130731
          Length = 338

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/284 (61%), Positives = 224/284 (78%), Gaps = 8/284 (2%)

Query: 1   MVSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNL 60
           ++ NL I +SA  CP +H +NS+N   M+KR+E+W K++ R Y + EEW+VRF IYQ+N+
Sbjct: 10  VILNLWIIASA--CPEIHTKNSTNPAVMKKRYETWLKRYGRHYRDREEWEVRFDIYQSNV 67

Query: 61  EFIECINSQNNSYYLTDNKFADLTNEEFKSIYLGY-GKTRLSSNAGAGLFRYHGHGDLPE 119
           ++IE  NSQN SY L DN+FAD+TNEEFKS YLGY  + R+ +      FRYH HG+LP+
Sbjct: 68  QYIEFYNSQNYSYKLIDNRFADITNEEFKSTYLGYLPRFRVQTE-----FRYHKHGELPK 122

Query: 120 SVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQ 179
           S+DWRKKGAVT +KDQG CGSCWAFSAVAAVEGI++IK+  L+SLSEQ+LIDCD+ +GN+
Sbjct: 123 SIDWRKKGAVTHVKDQGRCGSCWAFSAVAAVEGINKIKTENLVSLSEQQLIDCDIKSGNE 182

Query: 180 GCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAM 239
           GC GG M  AF +IKK+GG+ T ++YPYKG+DG CNK KA ++AVTISG++ VPA NE M
Sbjct: 183 GCEGGDMYIAFNYIKKHGGIATAKEYPYKGRDGNCNKSKAKNNAVTISGYESVPARNEKM 242

Query: 240 LKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           LKAA AHQPVS+  DAGG+ FQ YS G+FSG CGK LNH +T+V
Sbjct: 243 LKAAVAHQPVSIATDAGGYAFQFYSKGIFSGSCGKNLNHGMTIV 286


>Medtr4g107930.1 | papain family cysteine protease | HC |
           chr4:44732137-44730694 | 20130731
          Length = 345

 Score =  282 bits (722), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 140/272 (51%), Positives = 181/272 (66%), Gaps = 2/272 (0%)

Query: 14  CPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS- 72
           C       S  +++M +R E W  Q+ + Y++P+E + R  I+  N+ +IE  N+  N+ 
Sbjct: 22  CAIQVTSRSLQVDSMYERHEQWMSQYSKVYKDPQEREERHKIFTANVNYIEVFNNDANNK 81

Query: 73  -YYLTDNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTG 131
            Y L  N+FADLTNEEF +    +     SS A    F+Y     +P +VDWRKKGAVT 
Sbjct: 82  LYKLGINQFADLTNEEFIASRNKFKGHMCSSIAKTTTFKYENVSAIPSTVDWRKKGAVTP 141

Query: 132 IKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFT 191
           +K+QG CG CWAFSAVAA EGI ++ +GKL+SLSEQEL+DCD    +QGC GGLMD AF 
Sbjct: 142 VKNQGQCGCCWAFSAVAATEGITKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFK 201

Query: 192 FIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSV 251
           FI +N GL+TE  YPY+G DGTCN  KA+ HA TI+G++ VPA+NE  L+ A A+QP+SV
Sbjct: 202 FIIQNHGLSTEAAYPYQGVDGTCNANKASIHAATITGYEDVPANNEQALQKAVANQPISV 261

Query: 252 GIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
            IDA G  FQ Y  GVFSG CG EL+H VT V
Sbjct: 262 AIDASGSDFQFYKSGVFSGSCGTELDHGVTAV 293


>Medtr4g047610.1 | papain family cysteine protease | HC |
           chr4:16868445-16867071 | 20130731
          Length = 343

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/258 (52%), Positives = 174/258 (67%), Gaps = 2/258 (0%)

Query: 28  MRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS--YYLTDNKFADLTN 85
           M +R   W  Q+ + Y++ +E + RF I+  N+ +IE  N  +N+  Y L  N+FADLTN
Sbjct: 34  MYERHRQWMSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDNNKLYTLGVNQFADLTN 93

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFS 145
           +EF S    +     SS      F+Y     +P SVDWRKKGAVT +K+QG CG CWAFS
Sbjct: 94  DEFTSSRNKFKGHMCSSITRTSTFKYENASAIPSSVDWRKKGAVTPVKNQGQCGCCWAFS 153

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
           AVAA EGIH++ +GKLISLSEQEL+DCD    +QGC GGLMD AF FI +N GL TE +Y
Sbjct: 154 AVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEANY 213

Query: 206 PYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSG 265
           PY+G DGTCN  K + +AVTI+G++ VP +NE  L+ A A+QP+SV IDA G  FQ Y  
Sbjct: 214 PYQGVDGTCNANKGSINAVTITGYEDVPTNNEQALQKAVANQPISVAIDASGSDFQFYKS 273

Query: 266 GVFSGFCGKELNHAVTLV 283
           GVF+G CG EL+H VT V
Sbjct: 274 GVFTGSCGTELDHGVTAV 291


>Medtr5g022560.1 | papain family cysteine protease | HC |
           chr5:8898326-8899733 | 20130731
          Length = 344

 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/259 (52%), Positives = 175/259 (67%), Gaps = 2/259 (0%)

Query: 27  AMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINS--QNNSYYLTDNKFADLT 84
           +M +R E W   + + Y++ +E + RF I+  N+++IE  N+   N SY L  N+FADLT
Sbjct: 34  SMHERHERWMNHYGKVYKDHQEREKRFKIFTENMKYIEAFNNGDNNESYKLGINQFADLT 93

Query: 85  NEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAF 144
           NEEF +    +     SS      F+Y     +P +VDWRKKGAVT +K+QG CG CWAF
Sbjct: 94  NEEFVASRNKFKGHMCSSIIRTTTFKYENVSAIPSTVDWRKKGAVTPVKNQGQCGCCWAF 153

Query: 145 SAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERD 204
           SAVAA EGIH++ +GKL+SLSEQEL+DCD    +QGC GGLMD AF FI +N GL TE  
Sbjct: 154 SAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQ 213

Query: 205 YPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYS 264
           YPY+G DGTCN  KA+  A TI+G++ VPA+NE  L+ A A+QP+SV IDA G  FQ Y 
Sbjct: 214 YPYQGVDGTCNANKASIQATTITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQFYK 273

Query: 265 GGVFSGFCGKELNHAVTLV 283
            GVF+G CG EL+H VT V
Sbjct: 274 SGVFTGSCGTELDHGVTAV 292


>Medtr3g075390.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |
           chr3:34312944-34311283 | 20130731
          Length = 362

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/292 (49%), Positives = 183/292 (62%), Gaps = 16/292 (5%)

Query: 1   MVSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNL 60
           +V ++ +    SE    H ++ S+ E++   +E WR  H     N  E Q RF+++++N+
Sbjct: 9   IVLSIALVLVVSESFDFHDKDVSSDESLWDLYERWRSHHTVS-RNLNEKQKRFNVFKSNV 67

Query: 61  EFIECINSQNNSYYLTDNKFADLTNEEFKSIYLG---------YGKTRLSSNAGAGLFRY 111
             +   N  +  Y L  NKFAD+TN EFK+ Y G          G  R+S     G F Y
Sbjct: 68  MHVHNTNKMDKPYKLKLNKFADMTNHEFKTTYAGSKVNHHRMFRGTPRVS-----GTFMY 122

Query: 112 HGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELID 171
                 P SVDWRKKGAVT +KDQG CGSCWAFS V AVEGI+QIK+ +L+ LSEQELID
Sbjct: 123 ENFTKAPASVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELID 182

Query: 172 CDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKK 231
           CD    NQGC GGLM+ AF +IK+ GG+TTE  YPY   DG+C+  K    AV+I GH+ 
Sbjct: 183 CD-NQENQGCNGGLMEYAFEYIKQKGGITTESYYPYTANDGSCDATKENVPAVSIDGHET 241

Query: 232 VPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           VPA++E  L  A A+QPVSV IDAGG  FQ YS GVF+G CGKELNH V +V
Sbjct: 242 VPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCGKELNHGVAIV 293


>Medtr1g107550.1 | papain family cysteine protease | HC |
           chr1:48881273-48878969 | 20130731
          Length = 473

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/266 (52%), Positives = 179/266 (67%), Gaps = 5/266 (1%)

Query: 22  SSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINS-QNNSYYLTDNKF 80
           + N   + K +ESW  +H + Y    E   RF I++ NL +IE  N+ +N+S+ L   KF
Sbjct: 40  AKNENHLMKLYESWLMKHGKVYNALGEKVRRFEIFKDNLRYIENHNNFENHSFKLGLTKF 99

Query: 81  ADLTNEEFKSIYLGYGKTR---LSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGT 137
           ADLTNEE++S++LG    +   L S + +  +    + +LPE VDWR+KGAV  +KDQG 
Sbjct: 100 ADLTNEEYRSMFLGTRPRKSKGLLSASKSDRYAIRDNDELPEHVDWREKGAVNPVKDQGQ 159

Query: 138 CGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNG 197
           CGSCWAFS VAAVEGI+QI +G LISLSEQEL+DCD G  N GC GGLMD AF FI KNG
Sbjct: 160 CGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDRGY-NMGCNGGLMDYAFEFIMKNG 218

Query: 198 GLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGG 257
           G+ TE DYPY  +D TC+  +     V+I G++ VP ++E  LK A AHQPVSV I+AGG
Sbjct: 219 GIDTEEDYPYHARDNTCDAFRKNARVVSIDGYEDVPQNDEKSLKKAVAHQPVSVAIEAGG 278

Query: 258 FLFQLYSGGVFSGFCGKELNHAVTLV 283
             FQLY  GVF+G CG EL+H V +V
Sbjct: 279 RAFQLYQSGVFTGICGTELDHGVAVV 304


>Medtr4g079470.1 | papain family cysteine protease | HC |
           chr4:30720667-30719276 | 20130731
          Length = 345

 Score =  268 bits (686), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 136/266 (51%), Positives = 180/266 (67%), Gaps = 6/266 (2%)

Query: 20  QNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS--YYLTD 77
           Q+ SN+    ++ E W   + + Y++ +E + R  I++ N+ +IE  N+  N+  Y L  
Sbjct: 32  QDDSNI---YEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGI 88

Query: 78  NKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGT 137
           N+FADLTNEEF +    +     SS      F+Y  +  +P +VDWRKKGAVT +K+QG 
Sbjct: 89  NQFADLTNEEFIASRNKFKGHMCSSITKTSTFKYE-NASVPSTVDWRKKGAVTPVKNQGQ 147

Query: 138 CGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNG 197
           CG CWAFSAVAA EGIH++ +GKL+SLSEQEL+DCD    +QGC GGLMD AF FI +N 
Sbjct: 148 CGCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNH 207

Query: 198 GLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGG 257
           GL TE  YPY+G DGTC+  KA+ HAVTI+G++ VPA+NE  L+ A A+QP+SV IDA G
Sbjct: 208 GLNTEAQYPYQGVDGTCSANKASIHAVTITGYEDVPANNEQALQKAVANQPISVAIDASG 267

Query: 258 FLFQLYSGGVFSGFCGKELNHAVTLV 283
             FQ Y  GVF+G CG EL+H VT V
Sbjct: 268 SDFQFYKSGVFTGSCGTELDHGVTAV 293


>Medtr4g079770.1 | papain family cysteine protease | HC |
           chr4:30880789-30882078 | 20130731
          Length = 345

 Score =  267 bits (683), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 133/258 (51%), Positives = 176/258 (68%), Gaps = 3/258 (1%)

Query: 28  MRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS--YYLTDNKFADLTN 85
           + ++ E W   + + Y++ +E + R  I++ N+ +IE  N+  N+  Y L  N+FADLTN
Sbjct: 37  IYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADLTN 96

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFS 145
           EEF +    +     SS      F+Y  +  +P +VDWRKKGAVT +K+QG CG CWAFS
Sbjct: 97  EEFIASRNKFKGHMCSSITKTSTFKYE-NASVPSTVDWRKKGAVTPVKNQGQCGCCWAFS 155

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
           AVAA EGIH++ +GKL+SLSEQEL+DCD    +QGC GGLMD AF FI +N GL TE  Y
Sbjct: 156 AVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQY 215

Query: 206 PYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSG 265
           PY+G DGTC+  KA+ HAVTI+G++ VPA+NE  L+ A A+QP+SV IDA G  FQ Y  
Sbjct: 216 PYQGVDGTCSANKASIHAVTITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQFYKS 275

Query: 266 GVFSGFCGKELNHAVTLV 283
           GVF+G CG EL+H VT V
Sbjct: 276 GVFTGSCGTELDHGVTAV 293


>Medtr4g104370.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |
           chr4:43181814-43180214 | 20130731
          Length = 360

 Score =  265 bits (678), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 136/256 (53%), Positives = 172/256 (67%), Gaps = 7/256 (2%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKSI 91
           +E WR  H     + +E   RF++++ N+  +   N  +  Y L  NKFAD+TN EF+SI
Sbjct: 40  YERWRSHHTVT-RSLDEKNNRFNVFKANVMHVHNTNKLDKPYKLKLNKFADMTNYEFRSI 98

Query: 92  Y----LGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAV 147
           Y    + + +     +   G F Y     +P S+DWRK GAVTG+KDQG CGSCWAFS +
Sbjct: 99  YADSKVNHHRMFRGMSHDNGPFMYENVEGVPSSIDWRKIGAVTGVKDQGQCGSCWAFSTI 158

Query: 148 AAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPY 207
            AVEGI+QIK+ KL+SLSEQEL+DCD    NQGC GGLM+ AF FIK+NG +TTE +YPY
Sbjct: 159 VAVEGINQIKTQKLVSLSEQELVDCDT-EVNQGCNGGLMEYAFEFIKQNG-ITTETNYPY 216

Query: 208 KGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGV 267
             KDGTCN +K    AV+I GH+ VPA+NE  L  AAA+QP+SV IDAGG  FQ YS GV
Sbjct: 217 AAKDGTCNIQKENKPAVSIDGHENVPANNEKALLKAAANQPISVAIDAGGSDFQFYSEGV 276

Query: 268 FSGFCGKELNHAVTLV 283
           F+G CG ELNH V +V
Sbjct: 277 FTGHCGTELNHGVAIV 292


>Medtr3g116080.1 | papain family cysteine protease | HC |
           chr3:54276528-54278225 | 20130731
          Length = 350

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/268 (53%), Positives = 181/268 (67%), Gaps = 8/268 (2%)

Query: 21  NSSNLEAMRKR---FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTD 77
           +S +L++M K    FESW  +H + YE  EE  +RF +++ NL+ I+  N   ++Y+L  
Sbjct: 33  SSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKVVSNYWLGL 92

Query: 78  NKFADLTNEEFKSIYLGYGKTRLSSN--AGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQ 135
           N+FADL+++EFK+ YLG  K  LS    +    F Y    DLP+SVDWRKKGAVT +K+Q
Sbjct: 93  NEFADLSHQEFKNKYLGL-KVDLSQRRESSEEEFTYR-DVDLPKSVDWRKKGAVTPVKNQ 150

Query: 136 GTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKK 195
           G CGSCWAFS VAAVEGI+QI +G L SLSEQELIDCD    N GC GGLMD AF+FI K
Sbjct: 151 GQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDT-TYNNGCNGGLMDYAFSFIVK 209

Query: 196 NGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDA 255
           NGGL  E DYPY  ++ TC  +K     VTI+G+  VP +NE  L  A A+QP+SV I+A
Sbjct: 210 NGGLHKEEDYPYIMEESTCEMKKEVSEVVTINGYHDVPQNNEQSLLKALANQPLSVAIEA 269

Query: 256 GGFLFQLYSGGVFSGFCGKELNHAVTLV 283
            G  FQ YSGGVF G CG EL+H V+ V
Sbjct: 270 SGRDFQFYSGGVFDGHCGSELDHGVSAV 297


>Medtr4g080730.1 | papain family cysteine protease | HC |
           chr4:31195577-31193936 | 20130731
          Length = 340

 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 131/258 (50%), Positives = 174/258 (67%), Gaps = 4/258 (1%)

Query: 27  AMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS-YYLTDNKFADLTN 85
           ++++R E W  ++ + Y++  E + RF I++ N+EFIE  N+ +N  Y L+ N  ADLT 
Sbjct: 35  SLQERHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADLTL 94

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFS 145
           +EFK+   GY K  +        F+Y     +PE+VDWR KGAVT IKDQG CGSCWAFS
Sbjct: 95  DEFKASRNGYKK--IDREFATTSFKYENVTAIPEAVDWRVKGAVTPIKDQGQCGSCWAFS 152

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
            VAA+EGI+QI +GKLISLSEQEL+DCD    +QGC GGLM+  F FI KNGG+T+E +Y
Sbjct: 153 TVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNY 212

Query: 206 PYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSG 265
           PYK  DG+CN    A  A  I+G++KVP ++E  L  A A+QP+SV IDA    F  YS 
Sbjct: 213 PYKAADGSCNTATTAPVA-KITGYEKVPVNSEISLLKAVANQPISVSIDASDSSFMFYSS 271

Query: 266 GVFSGFCGKELNHAVTLV 283
           G+++G CG EL+H VT V
Sbjct: 272 GIYTGECGTELDHGVTAV 289


>Medtr4g094918.1 | papain family cysteine protease | HC |
           chr4:39283313-39286264 | 20130731
          Length = 359

 Score =  261 bits (668), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/287 (48%), Positives = 181/287 (63%), Gaps = 7/287 (2%)

Query: 2   VSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLE 61
           +++LL  S  +    M     SN E M   +E W  +H + Y    E   RF I++ NL 
Sbjct: 6   ITSLLFFSLITLSLAMDTSMRSNEEVM-TMYEEWLVKHHKVYNGLGEKDQRFEIFKDNLG 64

Query: 62  FIECINSQNNSYYLTDNKFADLTNEEFKSIYLGYG----KTRLSSNAGAGLFRYHGHGD- 116
           FI+  N+QN +Y +  NKFAD+TNEE++++YLG      +  +      G       GD 
Sbjct: 65  FIDEHNAQNYTYKVGLNKFADMTNEEYRNMYLGTKNDAKRNVMKIKITTGHRYAFNSGDR 124

Query: 117 LPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGN 176
           LP  VDWR KGAV  IKDQG+CGSCWAFS +A VE I++I +GKL+SLSEQEL+DCD   
Sbjct: 125 LPVHVDWRSKGAVAHIKDQGSCGSCWAFSTIATVEAINKIVTGKLVSLSEQELVDCDRA- 183

Query: 177 GNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASN 236
            N+GC GGLMD AF FI +NGG+ TE+DYPYKG +G C+  +     V+I G++ VPA N
Sbjct: 184 FNEGCNGGLMDYAFEFIVENGGIDTEQDYPYKGFEGRCDPTRKNAKVVSIDGYEDVPAYN 243

Query: 237 EAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           E  LK A +HQPVSV I+AGG   QLY  GVF+G CG  L+H V +V
Sbjct: 244 ENALKKAVSHQPVSVAIEAGGRALQLYQSGVFTGRCGTNLDHGVVVV 290


>Medtr2g075830.1 | papain family cysteine protease | HC |
           chr2:31726251-31727821 | 20130731
          Length = 341

 Score =  261 bits (667), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/257 (50%), Positives = 171/257 (66%), Gaps = 9/257 (3%)

Query: 26  EAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLTDNKFADLT 84
           + M +  E W  QH + Y+   E Q RF I++ N+ +IE  N+  N SY L  N FADLT
Sbjct: 33  DPMYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLNHFADLT 92

Query: 85  NEEF---KSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSC 141
           N EF   ++ + GY    + +      F+Y    D+P +VDWR++GAVT +K+QG CG C
Sbjct: 93  NHEFIAARNKFNGYLHGSIITT-----FKYKNVSDVPSAVDWRQEGAVTPVKNQGQCGCC 147

Query: 142 WAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTT 201
           WAFSAVA+ EGIH++ +G L+SLSEQEL+DCD    +QGC GGLMD AF FI +N GL+T
Sbjct: 148 WAFSAVASTEGIHKLTTGNLVSLSEQELVDCDTNGEDQGCEGGLMDDAFEFIIQNNGLST 207

Query: 202 ERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQ 261
           E +YPY+G DGTCNK +    A TISG++ VP ++E  L+ A A+QPVSV IDA G  FQ
Sbjct: 208 EAEYPYQGVDGTCNKTEVGSSAATISGYENVPVNDEQALQKAVANQPVSVAIDASGSDFQ 267

Query: 262 LYSGGVFSGFCGKELNH 278
            Y  GVF+G CG EL+H
Sbjct: 268 FYKSGVFTGSCGTELDH 284


>Medtr4g080700.1 | papain family cysteine protease | HC |
           chr4:31186744-31185065 | 20130731
          Length = 340

 Score =  259 bits (663), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 130/258 (50%), Positives = 171/258 (66%), Gaps = 4/258 (1%)

Query: 27  AMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS-YYLTDNKFADLTN 85
           ++++R E W  +H + YE+  E + RF I++ N+EFIE  N+ +N  Y L+ N  ADLT 
Sbjct: 35  SLQERHEQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKLSVNHLADLTL 94

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFS 145
           +EFK+   GY K  +        F+Y     +P +VDWR KGAVT IKDQG CGSCWAFS
Sbjct: 95  DEFKASRNGYKK--IDREFTTTSFKYENVTAIPAAVDWRVKGAVTPIKDQGQCGSCWAFS 152

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
            VAA EGI+QI +GKL+SLSEQEL+DCD    +QGC GGLM+  F FI KNGG+T+E +Y
Sbjct: 153 TVAATEGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNY 212

Query: 206 PYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSG 265
           PYK  DG+CN       A  I+G++KVP ++E  L  A A+QP+SV IDA    F  YS 
Sbjct: 213 PYKAADGSCNTATTTPVA-KITGYEKVPVNSEKSLLKAVANQPISVSIDASDSSFMFYSS 271

Query: 266 GVFSGFCGKELNHAVTLV 283
           G+++G CG EL+H VT V
Sbjct: 272 GIYTGECGTELDHGVTAV 289


>Medtr4g080360.1 | papain family cysteine protease | HC |
           chr4:31178403-31176385 | 20130731
          Length = 342

 Score =  259 bits (661), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 128/259 (49%), Positives = 175/259 (67%), Gaps = 4/259 (1%)

Query: 28  MRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLTDNKFADLTNE 86
           +  + E W  Q  + Y++  E + RF I++ N+EFIE  N+  N  + L+ N FADLTNE
Sbjct: 33  LSNKHEKWMTQFGKSYKDAAEKEKRFQIFKNNVEFIELFNAVGNKPFNLSINHFADLTNE 92

Query: 87  EFKSIYLGYGKT--RLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAF 144
           EFK+   G  K   +         FRYH    +P S+DWRK+GAVT IK+QG+CGSCWAF
Sbjct: 93  EFKASLNGNKKLHDKFDILNETTSFRYHNVTSVPASMDWRKRGAVTPIKNQGSCGSCWAF 152

Query: 145 SAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERD 204
           S VA++EGIHQI +G+L+SLSEQELIDC  GN + GC+GG ++ AF FI K GG+ +E +
Sbjct: 153 STVASIEGIHQITTGELVSLSEQELIDCVRGN-SSGCSGGYLEDAFKFIAKKGGMASETN 211

Query: 205 YPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYS 264
           YPYK  D  C  +K + H   I G++KVP+++E  L  A A+QPVSV +DAG ++FQ YS
Sbjct: 212 YPYKETDEKCKFKKESKHVAEIKGYEKVPSNSENDLLKAVANQPVSVYVDAGDYVFQFYS 271

Query: 265 GGVFSGFCGKELNHAVTLV 283
           GG+F+G CG + +H VT+V
Sbjct: 272 GGIFTGKCGTDTDHVVTIV 290


>Medtr4g079800.1 | papain family cysteine protease | HC |
           chr4:30891837-30893129 | 20130731
          Length = 345

 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/258 (49%), Positives = 173/258 (67%), Gaps = 3/258 (1%)

Query: 28  MRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS--YYLTDNKFADLTN 85
           + ++ E W   + + Y++ +E + R  I++ N+ +IE  N+  N+  Y L  N+FAD+TN
Sbjct: 37  IYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADITN 96

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFS 145
           EEF +    +     SS      F+Y  +  +P +VDWRKKGAVT +K+QG CG CWAFS
Sbjct: 97  EEFIASRNKFKGHMCSSITKTSTFKYE-NASVPSTVDWRKKGAVTPVKNQGQCGCCWAFS 155

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
           AVAA EGIH++ +GKL+SLSEQEL+DCD    +QGC GGLMD AF FI +N GL TE  Y
Sbjct: 156 AVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLHTEAQY 215

Query: 206 PYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSG 265
           PY+G DGTC+  + +  A TI+G++ VPA+NE  L+ A A+QP+SV IDA G  FQ Y  
Sbjct: 216 PYQGVDGTCSANETSTPAATIAGYEDVPANNENALQKAVANQPISVAIDASGSDFQFYKS 275

Query: 266 GVFSGFCGKELNHAVTLV 283
           GVF+G CG +L+H VT V
Sbjct: 276 GVFTGSCGTQLDHGVTAV 293


>Medtr1g018840.1 | papain family cysteine protease | HC |
           chr1:5550841-5545981 | 20130731
          Length = 474

 Score =  254 bits (649), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 136/288 (47%), Positives = 181/288 (62%), Gaps = 7/288 (2%)

Query: 1   MVSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNL 60
           +  ++ I S     P       +N E +   +E W  +H + Y    E   RF I++ NL
Sbjct: 25  LALDMSIISYDKTHPDKSTSKRTNKEVL-TMYEEWLVKHGKSYNGLGEKDKRFEIFKDNL 83

Query: 61  EFIECINSQNNSYYLTDNKFADLTNEEFKSIYLGY---GKTRLSSNAGAGLFRYHGH-GD 116
           +FI+  N  N++Y L   +FADLTNEE++S +LG       R+    G+   RY    GD
Sbjct: 84  KFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKLGGSKSNRYAPRVGD 143

Query: 117 -LPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVG 175
            LPESVDWRK+GAV G+KDQ +CGSCWAFSA+AAVEGI++I +G LISLSEQEL+DCD  
Sbjct: 144 KLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDTS 203

Query: 176 NGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPAS 235
             N+GC GGLMD AF FI  NGG+ +E DYPYK  DG C++ +     VTI  ++ VPA 
Sbjct: 204 Y-NEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNAKVVTIDDYEDVPAY 262

Query: 236 NEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           +E  L+ A A+QP++V ++ GG  FQLY  GVF+G CG  L+H V  V
Sbjct: 263 DELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVAAV 310


>Medtr1g018840.2 | papain family cysteine protease | HC |
           chr1:5550773-5546467 | 20130731
          Length = 457

 Score =  254 bits (648), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 136/288 (47%), Positives = 181/288 (62%), Gaps = 7/288 (2%)

Query: 1   MVSNLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNL 60
           +  ++ I S     P       +N E +   +E W  +H + Y    E   RF I++ NL
Sbjct: 25  LALDMSIISYDKTHPDKSTSKRTNKEVL-TMYEEWLVKHGKSYNGLGEKDKRFEIFKDNL 83

Query: 61  EFIECINSQNNSYYLTDNKFADLTNEEFKSIYLGY---GKTRLSSNAGAGLFRYHGH-GD 116
           +FI+  N  N++Y L   +FADLTNEE++S +LG       R+    G+   RY    GD
Sbjct: 84  KFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKIDPNRRMKKLGGSKSNRYAPRVGD 143

Query: 117 -LPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVG 175
            LPESVDWRK+GAV G+KDQ +CGSCWAFSA+AAVEGI++I +G LISLSEQEL+DCD  
Sbjct: 144 KLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDTS 203

Query: 176 NGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPAS 235
             N+GC GGLMD AF FI  NGG+ +E DYPYK  DG C++ +     VTI  ++ VPA 
Sbjct: 204 Y-NEGCNGGLMDYAFEFIISNGGIDSEDDYPYKAVDGRCDQNRKNAKVVTIDDYEDVPAY 262

Query: 236 NEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           +E  L+ A A+QP++V ++ GG  FQLY  GVF+G CG  L+H V  V
Sbjct: 263 DELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVAAV 310


>Medtr3g102220.1 | papain family cysteine protease | HC |
           chr3:47106424-47111900 | 20130731
          Length = 474

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 131/265 (49%), Positives = 178/265 (67%), Gaps = 20/265 (7%)

Query: 32  FESWRKQHDRRYENPE--EWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFK 89
           +E WR +H +   N +  E   RF I++ NL+FI+  N++N +Y +  N+FADL+NEE++
Sbjct: 53  YEEWRVKHGKLNNNIDGSEKDKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYR 112

Query: 90  SIYLG---------YGKTRLSSNAGAGLFRYHGH-GD-LPESVDWRKKGAVTGIKDQGTC 138
           S YLG           +T+  SN      RY    GD LP+SVDWR +GAV  +KDQG+C
Sbjct: 113 SRYLGTKIDPIGMMMARTKTRSN------RYAPSVGDKLPKSVDWRSQGAVVQVKDQGSC 166

Query: 139 GSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGG 198
           GSCWAFS +AAVEGI++I +G+L+SLSEQEL+DCD    N GC GGLM+ AF FI  NGG
Sbjct: 167 GSCWAFSTIAAVEGINKIVTGELVSLSEQELVDCD-RTVNAGCDGGLMEYAFEFIINNGG 225

Query: 199 LTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGF 258
           + ++ DYPY+G DG C++ K     V+I  +++VPA +E  LK A A+QP+SV I+AGG 
Sbjct: 226 IDSDEDYPYRGVDGKCDQYKKNARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGR 285

Query: 259 LFQLYSGGVFSGFCGKELNHAVTLV 283
            FQLY  G+F+G CG  L+H VT V
Sbjct: 286 EFQLYVSGIFTGKCGTALDHGVTAV 310


>Medtr2g083930.1 | papain family cysteine protease | HC |
           chr2:35231037-35228046 | 20130731
          Length = 344

 Score =  240 bits (613), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 120/262 (45%), Positives = 168/262 (64%), Gaps = 6/262 (2%)

Query: 28  MRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLTDNKFADLTNE 86
           + ++ E W ++H + Y++  E + RF I++ NLEFIE  N+  +N + L+ N+F D TN+
Sbjct: 31  LLEKHEQWMEEHGKFYKDAAEKEQRFQIFKENLEFIESFNAAGDNGFNLSINQFGDQTND 90

Query: 87  EFKSIYLGYGKTRLSSNAGAGL-----FRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSC 141
           EFK+ YL   K  L     A +     FRY    ++P ++DWR++GAVT IK Q  CGSC
Sbjct: 91  EFKANYLNGKKKPLIGVGIAAIEEESVFRYENVTEVPATMDWRERGAVTPIKHQHLCGSC 150

Query: 142 WAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTT 201
           WAF+ VAA+EGIHQI +G+L+SLSEQEL+DC   N   GC GG ++ A  FI K GG+T+
Sbjct: 151 WAFATVAAIEGIHQITTGRLVSLSEQELVDCVKTNTTDGCNGGYVEDACDFIVKKGGITS 210

Query: 202 ERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQ 261
           E +YPY   DG CN  K  ++   I G++ VPA+NE  L  A A+QP++V I A    FQ
Sbjct: 211 ETNYPYTRVDGKCNVRKGTYNVAKIKGYEHVPANNEKALLKAVANQPIAVYIAATKRAFQ 270

Query: 262 LYSGGVFSGFCGKELNHAVTLV 283
            YS G+  G CG +L+H VT+V
Sbjct: 271 FYSSGILKGKCGIDLDHTVTIV 292


>Medtr3g112430.1 | papain family cysteine protease | HC |
           chr3:52684152-52681029 | 20130731
          Length = 443

 Score =  235 bits (599), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 122/259 (47%), Positives = 162/259 (62%), Gaps = 6/259 (2%)

Query: 30  KRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLTDNKFADLTNEEF 88
           K F+ W KQH + Y + EE + RF ++Q N  F+   N   N+SY L+ N FADLT+ EF
Sbjct: 34  KLFQEWSKQHGKTYPSEEEKRYRFKVFQDNYAFVSQHNEMGNSSYTLSLNAFADLTHHEF 93

Query: 89  KSIYLGYGKTRLS----SNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAF 144
           K+  LG+  + L     ++     F  +G   +P  +DWRK  AVT +KDQG+CG+CW+F
Sbjct: 94  KTTRLGFSPSSLLRFKFNHFEDQQFDDNGILQVPSEIDWRKSDAVTPVKDQGSCGACWSF 153

Query: 145 SAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERD 204
           SA  A+EGI++I +G L+SLSEQEL+DCD    N GC GGLMD A+ FI  N G+ TE D
Sbjct: 154 SATGAIEGINKIVTGSLVSLSEQELVDCD-RTYNSGCDGGLMDYAYQFIIDNKGIDTEED 212

Query: 205 YPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYS 264
           YPY+ +   C K+K     VTI G+  VP ++E  L  A A QPVSVGI      FQLYS
Sbjct: 213 YPYQSRQLLCKKDKLKRRVVTIDGYTDVPPNDEKKLLKAVAVQPVSVGICGSARAFQLYS 272

Query: 265 GGVFSGFCGKELNHAVTLV 283
            G+F+G C   L+HAV +V
Sbjct: 273 KGIFTGPCSTYLDHAVLIV 291


>Medtr2g016180.1 | papain family cysteine protease | HC |
           chr2:4899750-4901997 | 20130731
          Length = 490

 Score =  234 bits (597), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 120/264 (45%), Positives = 166/264 (62%), Gaps = 9/264 (3%)

Query: 26  EAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS---YYLTDNKFAD 82
           E + + F+ W+K+H + Y +PEE  +R   ++ NL++I   N+  NS   ++L  N+FAD
Sbjct: 45  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 104

Query: 83  LTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCW 142
           ++NEEFK+ ++   K  +S  A     +     D P S+DWRKKG VTG+KDQG CGSCW
Sbjct: 105 MSNEEFKNKFISKVKKPISKRASNLHVKVESCDDAPYSLDWRKKGVVTGVKDQGNCGSCW 164

Query: 143 AFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTE 202
           +FS+  A+EG++ I +G LISLSEQEL+DCD    N GC GG MD AF ++  NGG+ TE
Sbjct: 165 SFSSTGAIEGVNAIVTGDLISLSEQELVDCDT--TNDGCEGGYMDYAFEWVINNGGIDTE 222

Query: 203 RDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQL 262
            DYPY G  GTCN  K     VTI G+  V  S+ A+   A   QP+SVGID     FQL
Sbjct: 223 ADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALF-CATVKQPISVGIDGSTLDFQL 281

Query: 263 YSGGVFSGFCGK---ELNHAVTLV 283
           Y+GG++ G C     +++HAV +V
Sbjct: 282 YTGGIYDGDCSSNPDDIDHAVLIV 305


>Medtr2g016270.1 | papain family cysteine protease | HC |
           chr2:4947144-4949388 | 20130731
          Length = 475

 Score =  225 bits (573), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 117/264 (44%), Positives = 162/264 (61%), Gaps = 24/264 (9%)

Query: 26  EAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS---YYLTDNKFAD 82
           E + + F+ W+K+H + Y +PEE  +R   ++ NL++I   N+  NS   ++L  N+FAD
Sbjct: 45  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 104

Query: 83  LTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCW 142
           ++NEEFK+ ++                +     D P S+DWRKKG VTG+KDQG CGSCW
Sbjct: 105 MSNEEFKNKFIS---------------KVESCDDAPYSLDWRKKGVVTGVKDQGNCGSCW 149

Query: 143 AFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTE 202
           +FS+  A+EG++ I +G LISLSEQEL+DCD    N GC GG MD AF ++  NGG+ TE
Sbjct: 150 SFSSTGAIEGVNAIVTGDLISLSEQELVDCDT--TNDGCEGGYMDYAFEWVINNGGIDTE 207

Query: 203 RDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQL 262
            DYPY G  GTCN  K     VTI G+  V  S+ A+   A   QP+SVGID     FQL
Sbjct: 208 ADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALF-CATVKQPISVGIDGSTLDFQL 266

Query: 263 YSGGVFSGFCGK---ELNHAVTLV 283
           Y+GG++ G C     +++HAV +V
Sbjct: 267 YTGGIYDGDCSSNPDDIDHAVLIV 290


>Medtr7g078600.1 | papain family cysteine protease | LC |
           chr7:29734253-29733107 | 20130731
          Length = 342

 Score =  222 bits (566), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 170/268 (63%), Gaps = 12/268 (4%)

Query: 18  HKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLT 76
           +++N  +L ++ +RFE W+ ++   Y++  E +  F I++ N+ +I+  N+  N  Y L 
Sbjct: 29  NQENDPSL-SLSERFEYWKTKYGVVYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYKLA 87

Query: 77  DNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQG 136
            N+F D   E+        G  R ++      F+Y    D+P +VDWRK+GAVT IK+QG
Sbjct: 88  INRFVDKPIEDSDD-----GFERTTTTTPTTTFKYENVTDIPATVDWRKRGAVTPIKNQG 142

Query: 137 TCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKN 196
            CGSCWAFSAVAA+EGI +I SG L+SLSEQ+L+DCD     +GC  G M  AF FI +N
Sbjct: 143 KCGSCWAFSAVAAIEGIQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILEN 202

Query: 197 GGLTTERDYPYKG-KDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDA 255
           GG+ TE +YPYK    GTC K     H V I  +++VP+++E  L  A A+QPVSVGID 
Sbjct: 203 GGIATEANYPYKRVVKGTCKK---VSHKVQIKSYEEVPSNSEDSLLKAVANQPVSVGIDM 259

Query: 256 GGFLFQLYSGGVFSGFCGKELNHAVTLV 283
            G +F+ YS G+F+G CG + NHA+T+V
Sbjct: 260 RG-MFKFYSSGIFTGECGTKPNHALTIV 286


>Medtr7g079230.1 | papain family cysteine protease | LC |
           chr7:30057324-30056171 | 20130731
          Length = 340

 Score =  218 bits (554), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 118/281 (41%), Positives = 169/281 (60%), Gaps = 9/281 (3%)

Query: 4   NLLITSSASECPPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFI 63
           N+LI          +++N  +L  + +R++ W+ ++   Y++  E +    I++ N+ +I
Sbjct: 12  NILIVIWVMFPSNQNQENDQSL-TLSERYKHWKIKYRVIYKDDAEEEKHIQIFKHNVAYI 70

Query: 64  ECINSQ-NNSYYLTDNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVD 122
           +  N+  N SY LT N+FADL  E       G+ K +L     + LF+Y    D+P +VD
Sbjct: 71  DSFNAAGNKSYKLTINRFADLPTEPSDD---GFKKRKLEPTTSS-LFKYKNITDIPAAVD 126

Query: 123 WRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCA 182
           WRK+GAVT +K+Q  CGSCWAFSAV A+EGI QI SG L+SLSEQEL+D    N   GC 
Sbjct: 127 WRKRGAVTPVKNQRECGSCWAFSAVGALEGIQQITSGNLVSLSEQELVDRVRSNWTNGCN 186

Query: 183 GGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKA 242
           GG +  AF F+ +NGG+ TE  YPY+G  G  N  K     V I  +++VP ++E  L  
Sbjct: 187 GGYLIDAFEFVLENGGIATEASYPYRGVKG--NNSKKVSRQVQIKSYEQVPRNSEDSLLK 244

Query: 243 AAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
             A+QPVSVGID  G + + YS G+F+G CG + NHAV +V
Sbjct: 245 VVANQPVSVGIDISG-MIRFYSSGIFTGECGTKPNHAVIIV 284


>Medtr2g015850.1 | papain family cysteine protease | HC |
           chr2:4742638-4745104 | 20130731
          Length = 364

 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/272 (43%), Positives = 163/272 (59%), Gaps = 12/272 (4%)

Query: 15  PPMHKQNSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSY 73
           P  H +N +  E     FE    Q+D+      E + R  I++ NLE+IE  N+  N SY
Sbjct: 50  PQEHVENEAKYET-NSAFEFKATQNDK----ISELEKRKRIFKNNLEYIENFNNAGNKSY 104

Query: 74  YLTDNKFADLTNEEFKSIYLGY--GKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTG 131
            L  N+++DLT++EF + + G    K   SS   +    ++ + D+P + DWR++GAVT 
Sbjct: 105 KLGLNQYSDLTSDEFLASHTGLKVSKQLSSSKMRSAAVPFNLNDDVPTNFDWRQQGAVTD 164

Query: 132 IKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFT 191
           +KDQG+CG CWAFS VAAVEG  +I +G+LISLSEQ+L+DCD    N GC GG MD+AF 
Sbjct: 165 VKDQGSCGCCWAFSVVAAVEGAVKINTGELISLSEQQLVDCD--ERNSGCHGGNMDSAFK 222

Query: 192 FIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSV 251
           +I +  G+ +E DYPY+    TC           I+    VPA++E  L  A A QPVSV
Sbjct: 223 YIIQK-GIVSEADYPYQEGSQTCQLNDQMKFEAQITNFIDVPANDEQQLLQAVAQQPVSV 281

Query: 252 GIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           GI+ G   FQ Y G V+SG CG+ +NHAVT V
Sbjct: 282 GIEVGD-EFQHYMGDVYSGTCGQSMNHAVTAV 312


>Medtr4g065077.1 | papain family cysteine protease | HC |
           chr4:24449551-24451468 | 20130731
          Length = 364

 Score =  193 bits (490), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/270 (42%), Positives = 168/270 (62%), Gaps = 15/270 (5%)

Query: 23  SNLEAMRKRFESWRKQHDRRYENPEEWQV-RFSIYQTNLEFIECINSQNNS---YYLTDN 78
           S+ E + + F+ W+K+H R Y N EE    RF I++TN ++I  +N++  S   + L+ N
Sbjct: 42  SSDEEVFELFQMWKKEHGRDYANSEEENAKRFEIFKTNFKYINEMNAKRKSQTQHRLSLN 101

Query: 79  KFADLTNEEFKSIYLGYGKTRLSSNA-GAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGT 137
           KFAD++ EEF   YL   + ++ SN   A L       +LP SVDWR+KGAVT ++DQG 
Sbjct: 102 KFADMSPEEFSKTYLPKIEMQVPSNRDNAKLKDDDDCENLPTSVDWREKGAVTEVRDQGD 161

Query: 138 CGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNG 197
           C S WAFS   A+EG+++I +G LI+LS QEL+DCD    ++GCAGG    AF ++ +NG
Sbjct: 162 CQSHWAFSVTGAIEGLNKIVTGNLINLSAQELVDCDP--ASKGCAGGFYFNAFGYVIENG 219

Query: 198 GLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGG 257
           G+ TE +YPY  K+GTC  ++ A+  V+I     +  + EA+L    + QPVSV +DA G
Sbjct: 220 GIDTEANYPYLAKNGTC--KENANKVVSIDNLLVLDGTEEALL-CRTSKQPVSVSLDATG 276

Query: 258 FLFQLYSGGVFSG-FCGKELNHA--VTLVI 284
              Q Y+GGV+ G  C KE  +A  V L++
Sbjct: 277 --LQFYAGGVYGGENCKKESRNANLVGLIV 304


>Medtr7g078630.1 | cysteine proteinase superfamily protein | LC |
           chr7:29742896-29746999 | 20130731
          Length = 954

 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/269 (39%), Positives = 149/269 (55%), Gaps = 40/269 (14%)

Query: 26  EAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTN 85
           + + +RFE W+ ++   Y++  E +  F I++ N+ +IE  N+ + S+            
Sbjct: 700 DKISERFEHWKTKYGVVYKDVAEKKKHFEIFKHNVIYIESFNADSQSHA----------- 748

Query: 86  EEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGS----- 140
                   G+ +T  +S+      R+    D+P +V WRK+ AVT +K+Q  CG+     
Sbjct: 749 --------GFKRTTRTSS------RHKNITDIPTNVYWRKRRAVTPVKNQRGCGNIKRHF 794

Query: 141 ------CWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIK 194
                 CWAFS VAA+EGI QI SG L+S SEQ+L+DC   N   GC GG    AF F  
Sbjct: 795 FLLLLRCWAFSTVAAIEGIQQITSGNLVSFSEQQLVDCVASNWTNGCNGGNKIDAFKFNL 854

Query: 195 KNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGID 254
           +NGG+ TE  YPYKG  G     K  HH V I G+++VP ++E  L    A+QPVSV ID
Sbjct: 855 ENGGIATEASYPYKGVKGN---SKKVHHQVQIKGYEQVPKNSEDSLLKVVANQPVSVNID 911

Query: 255 AGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
             G L + YS G+F+G CG + NHAVT+V
Sbjct: 912 MRGML-KFYSSGIFTGECGTKPNHAVTIV 939


>Medtr2g067900.1 | papain family cysteine protease | LC |
           chr2:28418529-28417363 | 20130731
          Length = 328

 Score =  181 bits (459), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/271 (44%), Positives = 151/271 (55%), Gaps = 20/271 (7%)

Query: 27  AMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYY-LTDNKFADLTN 85
           A   R E W K+  R Y +  E   RF I+   LE+IE  N   N+ Y L  N+++DLT+
Sbjct: 11  ATEMRHEQWMKEFGRTYADDAEKNKRFKIFAEKLEYIENFNRDGNATYELGLNQYSDLTD 70

Query: 86  EEFKSIY--------LGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGT 137
           EE+ + Y        + Y      S              +P+ VDWR  GAVT +KDQG 
Sbjct: 71  EEYVAKYSCIKFQSKVNYSSILNVSEISTTNPSIKKRKRIPDFVDWRDSGAVTDVKDQGD 130

Query: 138 CGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNG 197
           C SCWAF+A AAVEGI QIK+  L SLS QEL+DCD    N GC GG +DTAF +I K  
Sbjct: 131 CASCWAFAAAAAVEGIIQIKTQNLTSLSAQELVDCD--KNNFGCEGGHLDTAFDYIAKK- 187

Query: 198 GLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGG 257
            + TE DYPYK K GTC  +K    A  I G+K VP S EA L+ A A+QPV+VGI    
Sbjct: 188 EIATEADYPYKDKQGTCLNDKIKRSA-KIKGYKIVP-SGEANLQEAVANQPVAVGIQT-N 244

Query: 258 FLFQLYSGGVF-SGFCGK----ELNHAVTLV 283
             F  Y GG+F +G C      +LNHAV +V
Sbjct: 245 INFANYKGGIFGTGPCKPLPKLKLNHAVLIV 275


>Medtr8g086470.1 | papain family cysteine protease | HC |
           chr8:35875343-35877078 | 20130731
          Length = 364

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/269 (40%), Positives = 159/269 (59%), Gaps = 29/269 (10%)

Query: 23  SNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS---YYLTDNK 79
           S+ E + + F+ W+K+H R Y N EE               E +N++  S   + L+ NK
Sbjct: 58  SSDEEVFELFQMWKKEHGRDYANSEE---------------ENMNAKRKSQTQHRLSLNK 102

Query: 80  FADLTNEEFKSIYLGYGKTRLSSNA-GAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTC 138
           FAD++ EEF   YL   + ++ SN   A L       +LP SVDWR+KGAVT ++DQG C
Sbjct: 103 FADMSPEEFSKTYLPKIEMQVPSNRDNAKLKDDDDCENLPTSVDWREKGAVTEVRDQGDC 162

Query: 139 GSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGG 198
            S WAFS   A+EG+++I +G LI+LS QEL+DCD    ++GCAGG    AF ++ +NGG
Sbjct: 163 QSHWAFSVTGAIEGLNKIVTGNLINLSAQELVDCDP--ASKGCAGGFYFNAFGYVIENGG 220

Query: 199 LTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGF 258
           + TE +YPY  K+GTC  ++ A+  V+I     +  + EA+L    + QPVSV +DA G 
Sbjct: 221 IDTEANYPYLAKNGTC--KENANKVVSIDNLLVLDGTEEALL-CRTSKQPVSVSLDATG- 276

Query: 259 LFQLYSGGVFSG-FCGKELNHA--VTLVI 284
             Q Y+GGV+ G  C KE  +A  V L++
Sbjct: 277 -LQFYAGGVYGGENCKKESRNANLVGLIV 304


>Medtr2g015920.1 | papain family cysteine protease | LC |
           chr2:4781097-4782811 | 20130731
          Length = 374

 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 148/260 (56%), Gaps = 12/260 (4%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ---NNSYYLTDNKFADLTNEEF 88
           F+ W K+H R Y++ +E   +F I+ +NL++I   N++   +N + L    F D ++EEF
Sbjct: 53  FQLWMKEHGRVYKDLDEMAKKFDIFISNLKYITETNAKRKSSNGFLLGLTNFTDWSSEEF 112

Query: 89  KSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVA 148
           +  YL         +       +      P S+DWR KG V+ IKDQ  CGSCWAFSAV 
Sbjct: 113 QERYLHNIDMPTDIDTMKVNDVHLSSCSAPSSLDWRSKGVVSDIKDQKNCGSCWAFSAVG 172

Query: 149 AVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYK 208
           A+EGI+ I +GKLI+LSEQEL+DCD  +G  GC  G ++ AF ++ +N G+  + DYPY 
Sbjct: 173 AIEGINAITTGKLINLSEQELLDCDPISG--GCNSGWVNKAFDWVIRNKGVALDNDYPYT 230

Query: 209 GKDGTCNKEKAAHHAV-TISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGV 267
            + G C   +  + A+ +I+ +  V  S++ +L  A A QPVSV + A    F  YS G+
Sbjct: 231 AEKGVCKASQIPNSAISSINTYHHVEQSDQGLL-CAVAKQPVSVCLYAPQD-FHHYSSGI 288

Query: 268 FSG----FCGKELNHAVTLV 283
           + G       K+ NH V +V
Sbjct: 289 YDGPNCPVNSKDTNHCVLIV 308


>Medtr1g023210.1 | papain family cysteine protease | HC |
           chr1:7398040-7401108 | 20130731
          Length = 364

 Score =  168 bits (425), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 13/261 (4%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKSI 91
           F S++ +  + Y   EE   RF ++++NL   +     + S      KF+DLT  EF+  
Sbjct: 51  FTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDPSAQHGITKFSDLTASEFRRQ 110

Query: 92  YLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVE 151
           +LG  K RL   A A         +LPE  DWR+KGAVT +KDQG+CGSCWAFS   A+E
Sbjct: 111 FLGLNK-RLRLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALE 169

Query: 152 GIHQIKSGKLISLSEQELIDCD-------VGNGNQGCAGGLMDTAFTFIKKNGGLTTERD 204
           G + + +GKL SLSEQ+L+DCD        G+ + GC GGLM+ AF +I ++GG+ +E+D
Sbjct: 170 GANYLATGKLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGGVVSEKD 229

Query: 205 YPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYS 264
           Y Y G+DG+C  +K+   A ++S    V    + +      + P++V I+A     Q Y 
Sbjct: 230 YAYTGRDGSCKFDKSKVVA-SVSNFSVVSLDEDQIAANLVKNGPLAVAINAA--WMQTYM 286

Query: 265 GGVFSGF-CGK-ELNHAVTLV 283
            GV   + C K  L+H V L+
Sbjct: 287 SGVSCPYICAKARLDHGVLLL 307


>Medtr4g125300.1 | papain family cysteine protease | HC |
           chr4:51952476-51956344 | 20130731
          Length = 350

 Score =  167 bits (423), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/259 (42%), Positives = 141/259 (54%), Gaps = 14/259 (5%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKSI 91
           F  +  ++ +RY+  +E + RF I+  NL+ I+  N +   Y L  N FAD T EEF+S 
Sbjct: 51  FARFANRYGKRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEFRSH 110

Query: 92  YLGYGKTRLSSNAGAGLFRYHGHGD--LPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAA 149
            LG      + N  A L   H   D  LP   DWRK+G V+ +KDQG CGSCW FS   A
Sbjct: 111 RLG-----AAQNCSATLKGNHRITDVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGA 165

Query: 150 VEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKG 209
           +E  +    GK ISLSEQ+L+DC     N GC GGL   AF +IK NGGL TE  YPY G
Sbjct: 166 LESAYAQAFGKNISLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTG 225

Query: 210 KDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAH-QPVSVGIDAGGFLFQLYSGGVF 268
           ++G C K  + + AV + G   +    E  LK A A  +PVSV        F+LY  GV+
Sbjct: 226 QNGLC-KFTSENVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFQVVD-DFRLYKKGVY 283

Query: 269 -SGFCGK---ELNHAVTLV 283
            S  CG    ++NHAV  V
Sbjct: 284 TSTTCGSTPMDVNHAVLAV 302


>Medtr4g071060.1 | papain family cysteine protease | HC |
           chr4:26764609-26766750 | 20130731
          Length = 362

 Score =  164 bits (416), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 145/261 (55%), Gaps = 14/261 (5%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKSI 91
           F  ++ +  + Y + +E   RF I+++NL   +     + S      +F+DLT  EF+  
Sbjct: 48  FNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRKS 107

Query: 92  YLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVE 151
            LG     L  +A A         +LP+  DWR+KGAVT +K+QG+CGSCW+FS   A+E
Sbjct: 108 VLGLRGVGLPKDANAAPIL--PTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALE 165

Query: 152 GIHQIKSGKLISLSEQELIDCD-------VGNGNQGCAGGLMDTAFTFIKKNGGLTTERD 204
           G H + +GKL+SLSEQ+L+DCD        G+ + GC GGLM++AF +I K+GG+  E D
Sbjct: 166 GAHFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREED 225

Query: 205 YPYKGKD-GTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLY 263
           YPY G D G+C  +K    A +++    V    + +      + P+++ ++A     Q Y
Sbjct: 226 YPYSGTDRGSCKFDK-KKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNA--VYMQTY 282

Query: 264 SGGVFSGF-CGKELNHAVTLV 283
            GGV   + C K L+H V LV
Sbjct: 283 VGGVSCPYICSKRLDHGVLLV 303


>Medtr1g094135.1 | papain family cysteine protease | HC |
           chr1:42318672-42321114 | 20130731
          Length = 381

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 144/270 (53%), Gaps = 16/270 (5%)

Query: 25  LEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ--NNSYYLTDNKFAD 82
           L    K+F+ + + + + Y   EE+ +R  I+  NL  ++ +  Q  + +      +F+D
Sbjct: 49  LLKTEKKFKVFMQDYSKSYSTREEYLLRLGIFAKNL--VKAVEHQALDPTAIHGVTQFSD 106

Query: 83  LTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCW 142
           L++EEF+  Y G      SSN    +        LPE+ DWR+KGAVTG+K QGTCGSCW
Sbjct: 107 LSDEEFERFYTGVRGGFPSSNGVGEVAPPLDVEGLPENFDWREKGAVTGVKMQGTCGSCW 166

Query: 143 AFSAVAAVEGIHQIKSGKLISLSEQELIDCDV-------GNGNQGCAGGLMDTAFTFIKK 195
           AFS   ++EG + + +GKL+SLSEQ+L+DCD         + + GC GGLM  A+ ++ +
Sbjct: 167 AFSTTGSIEGANFLATGKLLSLSEQQLVDCDSKCDITDKTSCDNGCNGGLMTNAYNYLLE 226

Query: 196 NGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDA 255
            GGL  E  YPY G  G C K      AV I+    +P     +      H P+++G++A
Sbjct: 227 AGGLEEENAYPYTGGKGEC-KFDPKKIAVKITNFTNIPVDENQIAAYLVNHGPLAMGVNA 285

Query: 256 GGFLFQLYSGGVFSGF-CGKE-LNHAVTLV 283
                Q Y GGV     C K  LNH V LV
Sbjct: 286 --VFMQTYIGGVSCPLICSKRMLNHGVLLV 313


>Medtr2g067560.1 | papain family cysteine protease | HC |
           chr2:28285028-28279801 | 20130731
          Length = 906

 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 153/279 (54%), Gaps = 32/279 (11%)

Query: 27  AMRKRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECIN-SQNNSYYLTDNKFADLTN 85
           A   R+E W K+ +R Y +  E + RF I+  NLE+IE  N +   +Y L  N+F+DLTN
Sbjct: 11  ATETRYEQWMKEFERNYADDAEKEKRFKIFAENLEYIENFNRAGKQTYKLGLNQFSDLTN 70

Query: 86  EEFKSIYLGYGKTR-----LSSNAGAGLFRYH----------GHGDLPESVDWRKKGAVT 130
           EEF ++Y      R     + S AG  +F                 +P+SVDW++ GAVT
Sbjct: 71  EEFAALYNCVDLKRELESSMVSTAGP-IFNMSEISPTNSPKGKRKPIPDSVDWKESGAVT 129

Query: 131 GIKDQGTCGSCWAFSAVAAVEGIHQIKSGK-LISLSEQELIDCDVGNGNQGCAGGLMDTA 189
            +K QG    C+AF+  AAVEGI +IK+ K L SLS QEL+DCD  NG  GC GG +  A
Sbjct: 130 NVKRQGC---CYAFATTAAVEGIMKIKTDKELTSLSMQELVDCDKANG--GCEGGSVRKA 184

Query: 190 FTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPV 249
             ++K N G+  + DYPY  K GTC   K    A  I G+  V    + +L+ A A QPV
Sbjct: 185 LEYMKTN-GIAKDVDYPYTEKVGTCLSNK-KDRAAKIDGYVIVSPGEQNLLE-AVAQQPV 241

Query: 250 SVGIDAGGFLFQLYSGGVF-SGFCGKE----LNHAVTLV 283
           +V I A    F+ Y  G+F SG CG +     +HAVTL+
Sbjct: 242 TVAI-AINDDFKKYESGIFGSGPCGPKESLNFSHAVTLI 279


>Medtr2g064475.1 | papain family cysteine protease | LC |
           chr2:27348422-27349665 | 20130731
          Length = 353

 Score =  157 bits (398), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 154/299 (51%), Gaps = 55/299 (18%)

Query: 31  RFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQ-NNSYYLTDNKFADLTNEEFK 89
           R E W K+  R YE+  E + RF I+   LE+IE  N   N +Y L  N+F+DLT EEF 
Sbjct: 15  RHEQWMKEFGRSYEDDAEKEKRFKIFAEKLEYIERFNRDGNETYELGLNQFSDLTYEEFV 74

Query: 90  SIYLGYGKTRLSSNA-GAGLFR-----------------------------------YHG 113
           S    YG +RL ++   + +F                                       
Sbjct: 75  S---AYGCSRLENHLLESSIFNSSEIPTIELPKVPPKRKRSPPSRPPRPPKRRTPPSTPP 131

Query: 114 HGDLPESVDWRKKGAVTGIKDQGT---CGSCWAFSAVAAVEGIHQIKSGK-LISLSEQEL 169
              +P  V+WR+KGAVT +K+Q     CGSCWAF+  A VEGI +IK  + L++LS QEL
Sbjct: 132 TTGIPGRVNWREKGAVTIVKNQDKPKQCGSCWAFAVTATVEGIMKIKQNRPLVALSAQEL 191

Query: 170 IDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGH 229
           IDCD   GN GC GG    AF +I KN G+T + DYPY+ +   CN+      A  I G+
Sbjct: 192 IDCD--QGNNGCDGGKASIAFEYIVKN-GITRDVDYPYRAQKLGCNRGSKRSFA-NIKGY 247

Query: 230 KKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVF-SGFCGKE----LNHAVTLV 283
            KV A  + +L+ A A QPV+V I A    F+ Y GG++ SG C  +    +NH VT+V
Sbjct: 248 AKVEAGEQNLLE-AVARQPVAVYISADKH-FEDYKGGIYGSGPCKPQTNLKVNHLVTVV 304


>Medtr2g015930.1 | papain family cysteine protease | LC |
           chr2:4784077-4787518 | 20130731
          Length = 361

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 17/263 (6%)

Query: 32  FESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNS----YYLTDNKFADLTNEE 87
           F+ W K H R Y++ EE   +F I+ +NL++I   N    S    + L    FAD + +E
Sbjct: 52  FQIWMKDHGRVYKDLEEKAKKFDIFVSNLKYITESNGNRKSSPHGFLLGLTNFADWSPQE 111

Query: 88  FKSIYL-GYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQ-GTCGSCWAFS 145
           FK   L     + ++                P S+DWR KGAVT +KDQ   C SCW F+
Sbjct: 112 FKERMLHKLDMSMINDTMKLNDIASSSCNAAPSSLDWRLKGAVTNVKDQTNDCSSCWIFT 171

Query: 146 AVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDY 205
           AV A+EGI+ IK+GKLISLS QEL+DC+       C  G ++ AF ++ +NGGL ++ DY
Sbjct: 172 AVGAIEGINAIKTGKLISLSAQELLDCNPA----ACNTGFVNNAFNWVIRNGGLASDYDY 227

Query: 206 PYKGKDGTCNKEKAAHHAV-TISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYS 264
            Y  K G C   +  ++A  +I  +  V  S + +   A A QP+SV + A    F  YS
Sbjct: 228 AYTAKKGFCRASQVRNNAFSSIDTYYHVEQSEQGLF-CAVAKQPISVCLYAPQ-DFHHYS 285

Query: 265 GGVFSG----FCGKELNHAVTLV 283
            G++ G       K+ NH V +V
Sbjct: 286 YGIYDGPNCPVNSKDTNHCVLIV 308


>Medtr2g066980.1 | papain family cysteine protease | LC |
           chr2:28003563-28004930 | 20130731
          Length = 323

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 138/274 (50%), Gaps = 54/274 (19%)

Query: 30  KRFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECIN-SQNNSYYLTDNKFADLTNEEF 88
           K  E W K   R Y +  E + RF I+  NLE+IE  N + N +Y L  N+F DLT +EF
Sbjct: 32  KTHEQWMKDFGRTYADDVEKEKRFKIFAKNLEYIENFNRAGNETYELGLNQFLDLTKKEF 91

Query: 89  KSIYLGYG-KTRLSSN---AGAGLFRYHG----------HGDLPESVDWRKKGAVTGIKD 134
            S Y     K +L S+   + A LF                 +PES+DWR+ GAVT +K 
Sbjct: 92  TSKYTCANLKGKLESSMVASVAALFNVSKISTNNSLKGKRKPIPESIDWREGGAVTSVKR 151

Query: 135 QGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIK 194
           QG C SCWAF+ +AAVEGI QIK+ +L+SLS                A G++  A+ +IK
Sbjct: 152 QGACASCWAFATLAAVEGIVQIKNRELVSLS----------------ASGIVKFAYDYIK 195

Query: 195 KNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGID 254
           KN  + +E DYPY  K+G C   +                S E  L    A QPV+V I 
Sbjct: 196 KN-EIASEADYPYTEKEGKCLSIR----------------SGEENLLEVVAQQPVTVLI- 237

Query: 255 AGGFLFQLYSGGVF-SGFCGK----ELNHAVTLV 283
           A    F  Y GG+F SG CG     +L HAVT++
Sbjct: 238 ATNENFVNYKGGIFGSGPCGPIESLQLTHAVTVI 271


>Medtr1g023810.1 | papain family cysteine protease | LC |
           chr1:7670865-7672219 | 20130731
          Length = 267

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 6/169 (3%)

Query: 117 LPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGN 176
           +P+ VDWR +GAVT +K Q  CGSCWAF+ +AA+EG+ +I++G LISLS Q L+DCD   
Sbjct: 49  IPKFVDWRTRGAVTSVKQQRGCGSCWAFATMAALEGLWKIRTGNLISLSAQHLVDCD--P 106

Query: 177 GNQGCAGGLMDTAFTF--IKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVPA 234
           G+ GC GG + +A  F   + +GG+ ++ DYPYKG    C  +       T  G   +  
Sbjct: 107 GSNGCEGGHILSAINFETEQHSGGVPSDFDYPYKGVQEQCRNDIIPSAGFT--GFHSIRP 164

Query: 235 SNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
            +E  L  A A QPV+  + A          G+F G C  E NH++ +V
Sbjct: 165 GDEHQLLQAVAQQPVAASVAADTDFQNFKGSGIFEGSCANETNHSIAIV 213


>Medtr1g025450.1 | papain family cysteine protease | LC |
           chr1:8137849-8134532 | 20130731
          Length = 550

 Score =  125 bits (313), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 96/170 (56%), Gaps = 23/170 (13%)

Query: 117 LPESVDWRKKGAVTGIKDQGT-CGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVG 175
           +P+SVDWR++G VT IKDQ + CGSCWAF+ +A +EG+ QI++G LISLS Q L+DCD+ 
Sbjct: 55  IPKSVDWRERGVVTSIKDQTSWCGSCWAFTTMATLEGLWQIRTGNLISLSAQHLVDCDM- 113

Query: 176 NGNQGCAGGLMDTAFTFIKKN--GGLTTERDYPYKGKDGTCNKEKAAHHAVTISGHKKVP 233
            G++GC  G + +A  F  +   GG+ +E DYPYK   G C      H+ +T S      
Sbjct: 114 -GSKGCKNGSVFSAIKFETEQHVGGVPSEVDYPYKAFQGQC------HNDITPS------ 160

Query: 234 ASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
                 L    A QP++  +  G         G+F G C  + NH V +V
Sbjct: 161 ------LLQVVAQQPIASSVATGTDFRNFKGSGIFEGSCSNKTNHVVAIV 204


>Medtr4g072790.1 | papain family cysteine protease | HC |
           chr4:27550238-27549054 | 20130731
          Length = 327

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 132/254 (51%), Gaps = 30/254 (11%)

Query: 31  RFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKS 90
           +F  ++++  + Y + +E   RF+++++NL   +     + S      +F+DLT  EF++
Sbjct: 47  QFNEFKQRFGKVYSSKDEHDYRFNVFKSNLHRAKRHVIMDPSATHGVTRFSDLTPREFRN 106

Query: 91  IYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAV 150
             LG     L  +A A         +LP   DWR+KGAVT +++QG CGS W+FS + A+
Sbjct: 107 SILGLKGVGLPRHAKAAPIL--SSENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGAL 164

Query: 151 EGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGK 210
           EG + + +G+L+SLS+Q+ +DCD                  +IKK+GGL    DY Y   
Sbjct: 165 EGANFLSTGELVSLSDQQHVDCD----------------HEYIKKSGGLMRVEDYTYYKT 208

Query: 211 DGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSG 270
           +    +  AA+ +  +    ++ A+   +LK    + P++V I+A     Q Y GGV   
Sbjct: 209 N--IARSVAANFSSVLVDDDQIAAN---LLK----YGPLAVAINAA--YMQTYVGGVSCP 257

Query: 271 F-CGKELNHAVTLV 283
           + C + L+H V LV
Sbjct: 258 YTCTRRLDHGVLLV 271


>Medtr4g073660.1 | papain family cysteine protease | HC |
           chr4:27944493-27945667 | 20130731
          Length = 330

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 30/254 (11%)

Query: 31  RFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKS 90
           +F  ++++  + Y + +E   RF+++++NL   +     + S      +F+DLT  EF++
Sbjct: 46  QFNEFKQRFGKVYSSKDEHDYRFNVFKSNLHRAKRHGIMDPSATHGVTRFSDLTPREFRN 105

Query: 91  IYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAV 150
             LG     L  +A A         +LP   DWR+KGAVT +++QG CGS W+FS + A+
Sbjct: 106 SILGLKGVGLPRHAKAAPIL--SSENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGAL 163

Query: 151 EGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGK 210
           EG H + SG+L+SLSEQ  +DCD                  +I+K GGL    DY Y  K
Sbjct: 164 EGAHFLSSGELVSLSEQHHVDCD----------------HEYIQKYGGLMRVEDYTYY-K 206

Query: 211 DGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSG 270
             T     A   ++++  ++        +      H P++  I+A     Q Y GG+   
Sbjct: 207 TNTARSVAANFSSISVDDNQ--------IAANLVKHGPLAAAINA--VYMQTYVGGISCP 256

Query: 271 F-CGKELNHAVTLV 283
           + C + L+  V LV
Sbjct: 257 YICTRRLDLGVLLV 270


>Medtr4g072340.1 | papain family cysteine protease | HC |
           chr4:27435998-27437357 | 20130731
          Length = 331

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 30/254 (11%)

Query: 31  RFESWRKQHDRRYENPEEWQVRFSIYQTNLEFIECINSQNNSYYLTDNKFADLTNEEFKS 90
           +F  ++++  + Y + +E   RF+++++NL   +     + S      +F+DLT  EF++
Sbjct: 47  QFNEFKQRFGKVYSSKDEHDYRFNVFKSNLHRAKRHGIMDPSATHGVTRFSDLTPREFRN 106

Query: 91  IYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAV 150
             LG     L  +A A         +LP   DWR+KGAVT +++QG CGS W+FS + A+
Sbjct: 107 SILGLKGVGLPRHAKAAPIL--STENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGAL 164

Query: 151 EGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGK 210
           EG H + SG+L+SLSEQ  +DCD                  +I+K GGL    DY Y  K
Sbjct: 165 EGAHFLSSGELVSLSEQHHVDCD----------------HEYIQKYGGLMRVEDYTYY-K 207

Query: 211 DGTCNKEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSG 270
             T     A   ++++  ++        +      H P++  I+A     Q Y GG+   
Sbjct: 208 TNTARSVAANFSSISVDDNQ--------ITANLVKHGPLAAAINA--VYMQTYVGGISCP 257

Query: 271 F-CGKELNHAVTLV 283
           + C + L+  V LV
Sbjct: 258 YICTRRLDLGVLLV 271


>Medtr2g015840.1 | papain family cysteine protease | LC |
           chr2:4735030-4736569 | 20130731
          Length = 272

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 34/241 (14%)

Query: 1   MVSNLLITSSASECPPMHKQ--NSSNLEAMRKRFESWRKQHDRRYENPEEWQVRFSIYQT 58
           ++   +I   A   P M +    SS +EA ++    W  +++R Y N  E + R  I++ 
Sbjct: 4   LIGFCIILLWACAYPTMSRTLTESSVVEAHQQ----WMMKYERTYTNSSEMEKRKKIFKE 59

Query: 59  NLEFIECINSQ-NNSYYLTDNKFADLTNEEFKSIYLGYGKT-RLS-SNAGAGLFRYHGHG 115
           NLE+IE  N+  N SY L  N+++DLT+EEF + + G+  + +LS S   +    ++ + 
Sbjct: 60  NLEYIENFNNVGNKSYKLGLNRYSDLTSEEFIASHTGFKVSDQLSDSKMRSVAIPFNLND 119

Query: 116 DLPESVDWRKKGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSG-------KLISLSEQE 168
           D+P + DWR+KG VT +K+Q  CG CWAF+AVAAVEG  QI          K+ +  EQ+
Sbjct: 120 DVPTNFDWREKGVVTDVKNQRQCGCCWAFTAVAAVEG--QIPGAAQINGYFKVPANDEQQ 177

Query: 169 LIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHAVTISG 228
           L+   +    Q      + T++ F    GG+           +G+C  +   +HAVTI G
Sbjct: 178 LLRAVL----QQPVSVAISTSYDFHHYMGGVY----------EGSCGPK--LNHAVTIIG 221

Query: 229 H 229
           +
Sbjct: 222 Y 222



 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 223 AVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTL 282
           A  I+G+ KVPA++E  L  A   QPVSV I    + F  Y GGV+ G CG +LNHAVT+
Sbjct: 161 AAQINGYFKVPANDEQQLLRAVLQQPVSVAISTS-YDFHHYMGGVYEGSCGPKLNHAVTI 219

Query: 283 V 283
           +
Sbjct: 220 I 220


>Medtr7g078310.1 | papain family cysteine protease | LC |
           chr7:29607978-29606369 | 20130731
          Length = 263

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 9/140 (6%)

Query: 72  SYYLTDNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVDWRKKGAVTG 131
           ++ L  N FAD   ++ +S + G+ +T  +S+      R+    D+P +VDWRK+ AVT 
Sbjct: 114 THKLAINGFADQPIKDSQS-HAGFKRTTTTSS------RHKNITDIPTAVDWRKRRAVTP 166

Query: 132 IKDQGTCGSCWA--FSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTA 189
           +K+Q  C +     +     +EGI QI SG L+S SEQ+L+DC   N   GC GG    A
Sbjct: 167 VKNQRGCVTLLGIFYGGCNRIEGIQQIISGNLVSFSEQQLVDCVTSNWTNGCNGGNKIDA 226

Query: 190 FTFIKKNGGLTTERDYPYKG 209
           F FI +NGG+ TE  YPYKG
Sbjct: 227 FKFILENGGIATEASYPYKG 246


>Medtr2g047960.1 | papain family cysteine protease | LC |
           chr2:21199046-21199547 | 20130731
          Length = 99

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 126 KGAVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGL 185
           KG VT +K  G CGSC AFS    VE ++Q K+ KL  LSEQELIDCD    NQGC   L
Sbjct: 7   KGVVTNVKHLGQCGSCQAFSTNVVVESLNQRKTSKLGLLSEQELIDCD-NQENQGCNSAL 65

Query: 186 MDTAFTFIKKNGGLTTERDY 205
           M+ AF + K+  GLTTE  Y
Sbjct: 66  MEYAFEYFKQKCGLTTESYY 85


>Medtr8g087510.1 | papain family cysteine protease | LC |
           chr8:36164675-36165648 | 20130731
          Length = 174

 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 7/128 (5%)

Query: 158 SGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIKKNGGLTTERDYPYKGKDGTCNKE 217
           +G L+SLSEQ+L+DCD    + GC GG M  AF +I +  GL  E++Y + G++G+C  E
Sbjct: 23  TGHLVSLSEQQLLDCD--QSDFGCQGGWMSNAFQYIIQARGLMEEKEYAFAGREGSCKFE 80

Query: 218 KAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGV-FSGFCGKE- 275
           K+   A ++S +  V A    +  +   H PVS  I+A     Q Y  GV     C KE 
Sbjct: 81  KSEIMA-SVSNYNMVYADQYQISASIVKHGPVSTAINAA--WMQTYVCGVSCPDVCAKED 137

Query: 276 LNHAVTLV 283
           L+HAV LV
Sbjct: 138 LSHAVLLV 145


>Medtr3g029560.1 | papain family cysteine protease | LC |
           chr3:9298075-9297252 | 20130731
          Length = 239

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 128 AVTGIKDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMD 187
            +T + DQ   G C+  + +  VE  + I  GKL+ LS QE IDCD   G+ GC  G   
Sbjct: 49  TITPVLDQLQLGICYYIAVIGTVESANMIAMGKLLRLSIQEPIDCD--PGSCGCHHGNHI 106

Query: 188 TAFTFIKKNGGLTTERDYPYKGKDGTCNKEKAAHHA------VTISGHKKVPASNEAMLK 241
           + F +IK NG    E DYP+  +   C  +   H        VT+   + +   +E  LK
Sbjct: 107 SVFAYIKNNGIALVE-DYPFVSETQPCYAKNILHKPRVFINDVTVLNKRGLLGEDE--LK 163

Query: 242 AAAAHQPVSVGIDAGGFLFQLYSGGVF 268
            A + +PV V +  G   F+ + GG+F
Sbjct: 164 KAISMRPVMVILKVGYEFFE-FKGGIF 189


>Medtr7g111050.2 | cathepsin B-like cysteine protease | HC |
           chr7:45540635-45536215 | 20130731
          Length = 297

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 6/140 (4%)

Query: 77  DNKFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVD----WRKKGAVTGI 132
           + +F++ T  +FK + LG  +T  S  + A +  +     LP+  D    W +   +  I
Sbjct: 56  NPRFSNFTVGQFKRL-LGVKQTPRSELSSAPVVTHPKSLKLPKDFDARTAWSQCSTIGRI 114

Query: 133 KDQGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTF 192
            DQG CGSCWAF AV ++     I     +SLS  +++ C       GCAGG   +A+ +
Sbjct: 115 LDQGHCGSCWAFGAVESLSDRFCIHFDMNVSLSVNDILACCGLLCGAGCAGGTPFSAWIY 174

Query: 193 IKKNGGLTTERDYPYKGKDG 212
           +  +G +T E D PY  + G
Sbjct: 175 LAHHGVVTEECD-PYFDQIG 193


>Medtr7g111050.1 | cathepsin B-like cysteine protease | HC |
           chr7:45540655-45535648 | 20130731
          Length = 356

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 6/138 (4%)

Query: 79  KFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVD----WRKKGAVTGIKD 134
           +F++ T  +FK + LG  +T  S  + A +  +     LP+  D    W +   +  I D
Sbjct: 63  RFSNFTVGQFKRL-LGVKQTPRSELSSAPVVTHPKSLKLPKDFDARTAWSQCSTIGRILD 121

Query: 135 QGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIK 194
           QG CGSCWAF AV ++     I     +SLS  +++ C       GCAGG   +A+ ++ 
Sbjct: 122 QGHCGSCWAFGAVESLSDRFCIHFDMNVSLSVNDILACCGLLCGAGCAGGTPFSAWIYLA 181

Query: 195 KNGGLTTERDYPYKGKDG 212
            +G +T E D PY  + G
Sbjct: 182 HHGVVTEECD-PYFDQIG 198


>Medtr2g016380.1 | cysteine proteinase superfamily protein | HC |
           chr2:5009394-5011100 | 20130731
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 216 KEKAAHHAVTISGHKKVPASNEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCG-- 273
           K K     VTI G+  V  S+ A+   A   QP+SVGID     FQLY+GG++ G C   
Sbjct: 16  KLKEETKVVTIDGYTDVTQSDSALF-CATVKQPISVGIDGSTLDFQLYTGGIYDGDCSSN 74

Query: 274 -KELNHAVTLV 283
             +++HAV +V
Sbjct: 75  PDDIDHAVLIV 85


>Medtr7g111060.1 | cathepsin B-like cysteine protease | HC |
           chr7:45547798-45542808 | 20130731
          Length = 359

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 79  KFADLTNEEFKSIYLGYGKTRLSSNAGAGLFRYHGHGDLPESVD----WRKKGAVTGIKD 134
           +F++ T  +FK + LG  +          +  +     LP+  D    W +   +  I D
Sbjct: 66  RFSNFTVGQFKRL-LGVKQAPKKELLSTPVVTHPKSLKLPKEFDARTAWSQCSTIGKILD 124

Query: 135 QGTCGSCWAFSAVAAVEGIHQIKSGKLISLSEQELIDCDVGNGNQGCAGGLMDTAFTFIK 194
           QG CGSCWAF AV +++    I     ISLS  +L+ C       GC GG    A+ ++ 
Sbjct: 125 QGHCGSCWAFGAVESLQDRFCIHFDMNISLSVNDLLACCGFLCGAGCDGGTPIYAWRYLA 184

Query: 195 KNGGLTTERDYPY 207
            +G +T E D PY
Sbjct: 185 HHGVVTEECD-PY 196


>Medtr7g078580.1 | papain family cysteine protease | HC |
           chr7:29730091-29729708 | 20130731
          Length = 127

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 236 NEAMLKAAAAHQPVSVGIDAGGFLFQLYSGGVFSGFCGKELNHAVTLV 283
           +E  L  A A+QPVSV ID  G +F+ YS G+F+G C  + NHAVT+V
Sbjct: 4   DEDSLLKAVANQPVSVSIDMRG-MFKFYSSGIFTGECRTKPNHAVTIV 50