Miyakogusa Predicted Gene

Lj0g3v0231639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231639.1 Non Characterized Hit- tr|I1JN65|I1JN65_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11760
PE,92.16,0,FAD/NAD(P)-binding domain,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PNDRDTASE,CUFF.15198.1
         (422 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC | chr7:...   795   0.0  
Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast pr...   492   e-139
Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast pr...   463   e-130
Medtr2g040060.1 | lycopene epsilon cyclase | HC | chr2:17570312-...   259   3e-69

>Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC |
           chr7:35385688-35387184 | 20130731
          Length = 498

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/401 (93%), Positives = 391/401 (97%)

Query: 22  QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYL 81
           QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLD TWSGAVVYIDDKTKK L
Sbjct: 98  QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDL 157

Query: 82  DRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTIQATVVLDA 141
           DRPYGRVNRKLLKSKMLQKCI+NGVKFHQAKVIKVIHEESKSMLICNDGVT+QATVVLDA
Sbjct: 158 DRPYGRVNRKLLKSKMLQKCIANGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDA 217

Query: 142 TGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKEKNSR 201
           TGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDN+++LKE+NS+
Sbjct: 218 TGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNDLKLKERNSK 277

Query: 202 IPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEHCVIP 261
           IPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGI VKSIEEDE CVIP
Sbjct: 278 IPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIP 337

Query: 262 MGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGISGDGLS 321
           MGGPLPVLPQRV+GIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRG+ GD +S
Sbjct: 338 MGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEVS 397

Query: 322 SLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLP 381
           + VWKDLWPIERRRQREFFCFGMD+LLKLDLPGTRRFFDAFF+LEPHYWHGFLSSRL+LP
Sbjct: 398 ARVWKDLWPIERRRQREFFCFGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLP 457

Query: 382 ELLVFGLSLFSYASNTSRIEIMAKGTVPLVNMINNLIQDKE 422
           EL  FGLSLFSYASNTSR+EIMAKGT+PLVNM+NNLIQDKE
Sbjct: 458 ELFTFGLSLFSYASNTSRLEIMAKGTLPLVNMVNNLIQDKE 498


>Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36455122-36457181 | 20130731
          Length = 502

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 231/400 (57%), Positives = 298/400 (74%), Gaps = 4/400 (1%)

Query: 22  QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYL 81
           +QVS  G+ VC +DPNP  +WPNNYGVW+DEFE + L DCLD TW  A +YIDD   KYL
Sbjct: 97  EQVSLYGIKVCCVDPNPLSMWPNNYGVWLDEFEGLGLEDCLDKTWPMASIYIDDNKTKYL 156

Query: 82  DRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTIQATVVLDA 141
           DR YGRV+RK LK K+++ C+ NGV+F++AKV ++ H E +S+++C+DG  ++ ++V+DA
Sbjct: 157 DRCYGRVSRKKLKEKLVKGCVFNGVRFYKAKVWEIKHHEFESIVVCDDGTKLKGSLVVDA 216

Query: 142 TGFSRSLVQYD----KPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKE 197
           +GF  +   YD    +  N G Q+A+G+L EV+ HPFD+DKM+ MDWRDSHL N   L++
Sbjct: 217 SGFGSNFTDYDNHKLRKKNYGCQIAHGVLVEVDGHPFDLDKMVLMDWRDSHLGNEPYLRD 276

Query: 198 KNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEH 257
            NS+ PTFLYAMPFSS  IFLEETSLV+RP L   D++ RMVARL+HLGI VK + EDE 
Sbjct: 277 GNSKFPTFLYAMPFSSNLIFLEETSLVSRPVLSYMDVKRRMVARLRHLGINVKRVLEDEK 336

Query: 258 CVIPMGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGISG 317
           C+IPMGGPLP + Q V+  GG +G+VHPSTGYMVART+A APIVA +I + LGS R I G
Sbjct: 337 CLIPMGGPLPRISQNVMPFGGNSGIVHPSTGYMVARTMALAPIVAASINECLGSTRMIRG 396

Query: 318 DGLSSLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSR 377
             L + VW  +WPIERR  RE +CFGM+ LLKLDL  TR FFDAFFDL+P+YW GFLSS+
Sbjct: 397 KNLYANVWNSMWPIERRFVRECYCFGMETLLKLDLNETRSFFDAFFDLKPYYWQGFLSSK 456

Query: 378 LFLPELLVFGLSLFSYASNTSRIEIMAKGTVPLVNMINNL 417
           L L +  +  LSLF +ASN+SR +I+ K  VPL  +I N+
Sbjct: 457 LSLKDFALLSLSLFGHASNSSRFDIVTKCPVPLAQLIGNI 496


>Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36463401-36461725 | 20130731
          Length = 490

 Score =  463 bits (1192), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/398 (54%), Positives = 290/398 (72%), Gaps = 8/398 (2%)

Query: 22  QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYL 81
           +QVS  G+ VC +DPNP  IWPNNYGVW DEFE + L DCLD TW    +YIDD+T KYL
Sbjct: 93  EQVSLYGMKVCCVDPNPLSIWPNNYGVWFDEFEGLGLEDCLDKTWPITSIYIDDRTTKYL 152

Query: 82  DRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTIQATVVLDA 141
           DR YGRVN++ LK  +++ C+ NGV+F++AK +++ H E +S+++C+DGV ++ ++V+DA
Sbjct: 153 DRCYGRVNKRKLKENLVKGCVFNGVRFYKAKAMQIEHHEFESIVVCDDGVDLKGSLVVDA 212

Query: 142 TGFSRSLVQYD--KPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKEKN 199
           +GF    ++YD  K  N G+Q+AYG+LAEV+ HPFD+DK++ MDWRDSH       ++ N
Sbjct: 213 SGFGSKFIEYDDHKVKNYGFQIAYGVLAEVDAHPFDLDKVVLMDWRDSHC------RDGN 266

Query: 200 SRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEHCV 259
           ++  TF+YAMPFSS  IFLEETSLV+RP L   +++ RMVARLKHLGI VK + EDE  +
Sbjct: 267 AKSSTFMYAMPFSSNLIFLEETSLVSRPALSHTEVKTRMVARLKHLGINVKRVLEDEKGL 326

Query: 260 IPMGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGISGDG 319
           IPMGGPLP +PQ VI  G  +G+VHPSTGYM+ART+  APIVA +I Q LGS R I G  
Sbjct: 327 IPMGGPLPRIPQNVIAFGANSGVVHPSTGYMMARTMTLAPIVAASINQCLGSTRMIRGKQ 386

Query: 320 LSSLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLF 379
           + + VW  +WPIE R  REF+ FGM+ LLKLDL  TR+FFDAFF+L+P+Y  GFLSS L 
Sbjct: 387 VYANVWNSMWPIESRISREFYTFGMETLLKLDLNETRQFFDAFFELKPYYMQGFLSSSLT 446

Query: 380 LPELLVFGLSLFSYASNTSRIEIMAKGTVPLVNMINNL 417
           L +++   +SLF++ASN SR  I  K    L  M+ N+
Sbjct: 447 LNDIVWLSMSLFAHASNPSRFAIARKCPELLAKMMGNI 484


>Medtr2g040060.1 | lycopene epsilon cyclase | HC |
           chr2:17570312-17577439 | 20130731
          Length = 531

 Score =  259 bits (663), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/386 (39%), Positives = 229/386 (59%), Gaps = 15/386 (3%)

Query: 28  GLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYLDRPYGR 87
           GL V  I P+  L + NNYGVW DEF+ + L  C++  W   VVYID+K    + R YGR
Sbjct: 132 GLKVGLIGPD--LPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVYIDNKNPISIGRSYGR 189

Query: 88  VNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEES-KSMLICNDGVTIQATVVLDATGF-S 145
           V+R LL  ++L++C+ +GV +  +KV +++   +  + ++C     +   +   A+G  S
Sbjct: 190 VSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDTVVPCRLATVASGAAS 249

Query: 146 RSLVQYD-KPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKEKNSRIPT 204
             L+QY+        Q AYG+  EVE  P+D + M+FMD+RD ++ NN++  E  ++ PT
Sbjct: 250 GKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVFMDYRD-YMKNNVQSLE--AKYPT 306

Query: 205 FLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEHCVIPMGG 264
           FLYAMP S +K+F EET L ++  +  D ++ ++++RLK +GIKV    E+E   IP+GG
Sbjct: 307 FLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSRLKTMGIKVTKTYEEEWSYIPVGG 366

Query: 265 PLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYL--GSDR-----GISG 317
            LP   Q+ +  G  A MVHP+TGY V R+L+ AP  A+ I   L  G+ R     G S 
Sbjct: 367 SLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILNDGTARDIVTYGRSK 426

Query: 318 DGLSSLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSR 377
           +  S   W  LWP ER+RQR FF FG+ ++++LD+ GTR FF  FF L    W GFL S 
Sbjct: 427 ENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQGFLGSS 486

Query: 378 LFLPELLVFGLSLFSYASNTSRIEIM 403
           L   +LL+F L +F  A N  R+ ++
Sbjct: 487 LSSKDLLLFALYMFIIAPNNLRMSLV 512