Miyakogusa Predicted Gene

Lj0g3v0230509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230509.1 tr|A9SKT2|A9SKT2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233549,40.49,1e-17,Putative DNA-binding (bihelical)
motif predi,DNA-binding SAP; SAP,DNA-binding SAP; no
description,DN,CUFF.15082.1
         (594 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087830.1 | SAP domain protein | HC | chr3:39802124-398061...   598   e-171
Medtr3g087830.2 | SAP domain protein | HC | chr3:39802158-398060...   598   e-171
Medtr8g091530.1 | SAP domain protein | LC | chr8:38195727-382008...   490   e-138

>Medtr3g087830.1 | SAP domain protein | HC | chr3:39802124-39806174
           | 20130731
          Length = 720

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 344/594 (57%), Positives = 399/594 (67%), Gaps = 41/594 (6%)

Query: 6   VLDNRPIHQWXXXXXXXXXXXXXXXXXGLKDDLIRRLXXXXXXXXXXXXXXXXXXXXXXX 65
           +LD++PI +W                 GLK+DLI RL                       
Sbjct: 9   ILDDKPIDKWKVTELKEELKRRKLVTKGLKEDLINRLDEALREEREAAEAARKKEQEAAE 68

Query: 66  XXXXXXXXXXXGADPPDAEREGAVASEKDEANGVDGDVAGVKDSQTVTVDAEA-ADVNEK 124
                       A P   E+E A  S+KDEANG+D  V  +KDS+T+ VDAE    +   
Sbjct: 69  ------------ASP---EQEAAEGSKKDEANGLDTQVDELKDSKTINVDAEVFGTIQAS 113

Query: 125 ERAQXXXXXXXXXXXXXXXXXXXNAEKIPPEVVDYDSNKNDKQDGVTIPIDINNSVSTMD 184
           E+                     N  K+P EV+D D  KN  +DGVT P+D NNSVS MD
Sbjct: 114 EQGNSGVVEPFETD---------NVAKVP-EVLDNDGIKNVDEDGVTDPVDANNSVSAMD 163

Query: 185 QEIEYSRLPAGADSANAGEDVIVHSSXXXXXXXXXXXXXXXXXXS-----GQDSDRVYKN 239
            E E+       +SANAGE+ + H S                  +     GQDS    KN
Sbjct: 164 VEGEH------VESANAGEEAVAHPSNVETTVTITETVVTKTVSTEVVVDGQDSYSSEKN 217

Query: 240 NEDSGIKLDNEQSKVQLDSEDSKPQLQCDTKALCEDLMPDSSIPENQVSEVNPSL-GSQV 298
           NEDS IKL NE+SKVQLDSEDSKPQL+ DTK  C++LMP+SS PENQVSEVNPS+ G+QV
Sbjct: 218 NEDSAIKLGNEESKVQLDSEDSKPQLESDTKPPCDNLMPNSSAPENQVSEVNPSIIGTQV 277

Query: 299 KSDSISTDSVSINQKNELKDTIIADNVKLEQDFVRPEMVQEPSSRNDEPVYDESNSMDVG 358
           KSDS STDSVSINQKNELKDTIIA+NVKLEQD VR EMV+EPSSRND PVYDES+S+DVG
Sbjct: 278 KSDSFSTDSVSINQKNELKDTIIANNVKLEQDNVRQEMVEEPSSRNDVPVYDESHSVDVG 337

Query: 359 GLHEKKASVEENTNNITSPDFNKTINSDDAGYPEKLNLDRSSGDDSMEEDVPETKQFDSK 418
           GLHEKK+SVE N NN+TSP+ NKT +SDD GY EKLNLDRSSGDDSMEED+PE +Q+DSK
Sbjct: 338 GLHEKKSSVEANNNNVTSPELNKTNSSDDVGYSEKLNLDRSSGDDSMEEDLPEIRQYDSK 397

Query: 419 FNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKSDTNLDIDMSPVALADKRKYAEQ 478
           FN DELS  DK EN EV   KE++ T+VVGDG+SA  SDT+ D+++S V+L +KRKY EQ
Sbjct: 398 FN-DELS--DKVENNEVLKGKEQSKTIVVGDGVSARNSDTHQDMNISTVSLTEKRKYPEQ 454

Query: 479 ASVGNNEPAKRQRRWSTETRKGADLQSTTPRPPTTPKDEPVAPKRNFPRSDSFAAADAPK 538
             VGNNEPAKRQRRW+TE  KGADLQSTTPR  TTPKD  +  KRN  RS+S A  D PK
Sbjct: 455 TLVGNNEPAKRQRRWNTEAVKGADLQSTTPRSATTPKDGQITLKRNLSRSNSSATDDTPK 514

Query: 539 ERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGKTGKVSSFWMDQIKTHCYVT 592
           ERIVPPS+R PTNSLRID+FLRPFTLKAVQELLGKTG VSSFWMDQIKTHCYVT
Sbjct: 515 ERIVPPSRRAPTNSLRIDQFLRPFTLKAVQELLGKTGSVSSFWMDQIKTHCYVT 568


>Medtr3g087830.2 | SAP domain protein | HC | chr3:39802158-39806027
           | 20130731
          Length = 720

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 344/594 (57%), Positives = 399/594 (67%), Gaps = 41/594 (6%)

Query: 6   VLDNRPIHQWXXXXXXXXXXXXXXXXXGLKDDLIRRLXXXXXXXXXXXXXXXXXXXXXXX 65
           +LD++PI +W                 GLK+DLI RL                       
Sbjct: 9   ILDDKPIDKWKVTELKEELKRRKLVTKGLKEDLINRLDEALREEREAAEAARKKEQEAAE 68

Query: 66  XXXXXXXXXXXGADPPDAEREGAVASEKDEANGVDGDVAGVKDSQTVTVDAEA-ADVNEK 124
                       A P   E+E A  S+KDEANG+D  V  +KDS+T+ VDAE    +   
Sbjct: 69  ------------ASP---EQEAAEGSKKDEANGLDTQVDELKDSKTINVDAEVFGTIQAS 113

Query: 125 ERAQXXXXXXXXXXXXXXXXXXXNAEKIPPEVVDYDSNKNDKQDGVTIPIDINNSVSTMD 184
           E+                     N  K+P EV+D D  KN  +DGVT P+D NNSVS MD
Sbjct: 114 EQGNSGVVEPFETD---------NVAKVP-EVLDNDGIKNVDEDGVTDPVDANNSVSAMD 163

Query: 185 QEIEYSRLPAGADSANAGEDVIVHSSXXXXXXXXXXXXXXXXXXS-----GQDSDRVYKN 239
            E E+       +SANAGE+ + H S                  +     GQDS    KN
Sbjct: 164 VEGEH------VESANAGEEAVAHPSNVETTVTITETVVTKTVSTEVVVDGQDSYSSEKN 217

Query: 240 NEDSGIKLDNEQSKVQLDSEDSKPQLQCDTKALCEDLMPDSSIPENQVSEVNPSL-GSQV 298
           NEDS IKL NE+SKVQLDSEDSKPQL+ DTK  C++LMP+SS PENQVSEVNPS+ G+QV
Sbjct: 218 NEDSAIKLGNEESKVQLDSEDSKPQLESDTKPPCDNLMPNSSAPENQVSEVNPSIIGTQV 277

Query: 299 KSDSISTDSVSINQKNELKDTIIADNVKLEQDFVRPEMVQEPSSRNDEPVYDESNSMDVG 358
           KSDS STDSVSINQKNELKDTIIA+NVKLEQD VR EMV+EPSSRND PVYDES+S+DVG
Sbjct: 278 KSDSFSTDSVSINQKNELKDTIIANNVKLEQDNVRQEMVEEPSSRNDVPVYDESHSVDVG 337

Query: 359 GLHEKKASVEENTNNITSPDFNKTINSDDAGYPEKLNLDRSSGDDSMEEDVPETKQFDSK 418
           GLHEKK+SVE N NN+TSP+ NKT +SDD GY EKLNLDRSSGDDSMEED+PE +Q+DSK
Sbjct: 338 GLHEKKSSVEANNNNVTSPELNKTNSSDDVGYSEKLNLDRSSGDDSMEEDLPEIRQYDSK 397

Query: 419 FNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKSDTNLDIDMSPVALADKRKYAEQ 478
           FN DELS  DK EN EV   KE++ T+VVGDG+SA  SDT+ D+++S V+L +KRKY EQ
Sbjct: 398 FN-DELS--DKVENNEVLKGKEQSKTIVVGDGVSARNSDTHQDMNISTVSLTEKRKYPEQ 454

Query: 479 ASVGNNEPAKRQRRWSTETRKGADLQSTTPRPPTTPKDEPVAPKRNFPRSDSFAAADAPK 538
             VGNNEPAKRQRRW+TE  KGADLQSTTPR  TTPKD  +  KRN  RS+S A  D PK
Sbjct: 455 TLVGNNEPAKRQRRWNTEAVKGADLQSTTPRSATTPKDGQITLKRNLSRSNSSATDDTPK 514

Query: 539 ERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGKTGKVSSFWMDQIKTHCYVT 592
           ERIVPPS+R PTNSLRID+FLRPFTLKAVQELLGKTG VSSFWMDQIKTHCYVT
Sbjct: 515 ERIVPPSRRAPTNSLRIDQFLRPFTLKAVQELLGKTGSVSSFWMDQIKTHCYVT 568


>Medtr8g091530.1 | SAP domain protein | LC | chr8:38195727-38200819
           | 20130731
          Length = 761

 Score =  490 bits (1262), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/510 (54%), Positives = 350/510 (68%), Gaps = 10/510 (1%)

Query: 88  AVASEKDEANGVDGDVAGVKDSQTVTVDAEAADVNEKERAQXXXXXXXXXXXXXXXXXXX 147
           A  S+KDE +G  G+   +KD+   TV     D    + ++                   
Sbjct: 54  AEVSKKDEVDGFIGNTVELKDADRETVVDAVVDTGVMKSSESVESDEEGNSAVVHPTDTE 113

Query: 148 NAEKIPPEVVDYDSNKNDKQDGVTIPIDINNSVSTMDQEIEYSRLPAGADSANAGEDVIV 207
           N EKIP +VV+ DS K+ KQ G+T P+D +NS + ++QE+E   L AGADSAN   D+I 
Sbjct: 114 NDEKIP-DVVNNDSGKSGKQYGITKPVDNDNS-AMVEQEVEQMDLSAGADSANVAGDLI- 170

Query: 208 HSSXXXXXXXXXXXXXXXXXXSGQDSDRVYK----NNEDSGIKLDNEQSKVQLDSEDSKP 263
           HSS                  SGQ+     K    + +D   K ++++S V+L +E+SKP
Sbjct: 171 HSSTRGTPVTVTESVLTEVVVSGQEDSCSAKPRNGHGQDFVTKQEDKESNVRLSNEESKP 230

Query: 264 QLQCDTKALCEDLMPDSSIPENQVSEVNPSLGSQVKSDSISTDSVSINQKNELKDTIIAD 323
           +L+CD K  CE LMP+S + ENQVSEVNPSLGSQV+ DS+S++ VSINQKNE+KDTIIA+
Sbjct: 231 ELECDLKPPCEHLMPNSLLLENQVSEVNPSLGSQVRFDSVSSNFVSINQKNEIKDTIIAN 290

Query: 324 NVKLEQDFVRPEMVQEPSSRNDEPVYDESNSMDVGGLHEKKASVEENTNNITSPDFNKTI 383
           NVKLEQ+ VR EMV+EPSS+ D PV DES+SMDV  L EKKAS EEN ++  SPD NKT 
Sbjct: 291 NVKLEQEIVRSEMVEEPSSKIDVPVSDESHSMDVEELDEKKASAEENVSDNRSPDMNKTN 350

Query: 384 NSDDAGYPEKLNLDRSSGDDSMEEDVPET-KQFDSKFNVDELSLRDKGENIEVSIVKEEN 442
            S+D GYPEKLNLD SSGDDSMEED PE  KQFDS FNVDE  LR+KGE++E+ +V EE 
Sbjct: 351 ISEDVGYPEKLNLDGSSGDDSMEEDFPEEGKQFDSNFNVDE--LREKGESVELPVVNEER 408

Query: 443 NTVVVGDGLSAGKSDTNLDIDMSPVALADKRKYAEQASVGNNEPAKRQRRWSTETRKGAD 502
           + + VGDGLS+ +  T  + ++  V+L  K+K+ +Q SV NNEP KRQ+RW +ET KG+D
Sbjct: 409 DAIAVGDGLSSEEGGTQHNNNIPSVSLVKKQKFQDQTSVENNEPPKRQKRWKSETVKGSD 468

Query: 503 LQSTTPRPPTTPKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPF 562
            Q +T RP T PK EP+A KRN   SDS A  DAPKERIVPPSQR PTNSLRIDRF+RPF
Sbjct: 469 SQMSTVRPATAPKGEPIALKRNLSWSDSSAIDDAPKERIVPPSQRPPTNSLRIDRFIRPF 528

Query: 563 TLKAVQELLGKTGKVSSFWMDQIKTHCYVT 592
           TLKAVQELLGK+G + SFWMDQIKTHCYV+
Sbjct: 529 TLKAVQELLGKSGNIISFWMDQIKTHCYVS 558