Miyakogusa Predicted Gene
- Lj0g3v0229879.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0229879.1 tr|B9I7N3|B9I7N3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1097327 PE=3
SV=1,60.87,0.00000009,PROKAR_LIPOPROTEIN,NULL; seg,NULL,CUFF.15033.1
(322 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g092100.1 | PolI-like B DNA polymerase | HC | chr5:4022121... 302 3e-82
Medtr5g092100.2 | PolI-like B DNA polymerase | HC | chr5:4022121... 301 4e-82
Medtr3g050140.6 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 4e-35
Medtr3g050140.1 | PolI-like B DNA polymerase | HC | chr3:1974754... 145 4e-35
Medtr3g050140.3 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 7e-35
Medtr3g050140.5 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 7e-35
Medtr3g050140.2 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 7e-35
Medtr3g050140.4 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 7e-35
Medtr3g050140.9 | PolI-like B DNA polymerase | HC | chr3:1974564... 145 7e-35
Medtr3g050110.1 | PolI-like B DNA polymerase | HC | chr3:1973201... 142 4e-34
Medtr3g050140.8 | PolI-like B DNA polymerase | HC | chr3:1974564... 120 1e-27
Medtr3g050140.7 | PolI-like B DNA polymerase | HC | chr3:1974564... 104 1e-22
Medtr3g050110.3 | PolI-like B DNA polymerase | HC | chr3:1972956... 95 8e-20
Medtr3g050110.2 | PolI-like B DNA polymerase | HC | chr3:1972956... 95 8e-20
>Medtr5g092100.1 | PolI-like B DNA polymerase | HC |
chr5:40221218-40213069 | 20130731
Length = 1084
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/325 (51%), Positives = 203/325 (62%), Gaps = 8/325 (2%)
Query: 2 LRPFCPX----XXXXXXXXXXXXXXXXXXXHRRKMKLIQIVNKYNGIRNFTVPSNYIQFR 57
LRP+CP HRRK+K IQI + NG+RN T+ SN + R
Sbjct: 10 LRPYCPLCCRLSRPFSLSLSSCSSLVSLTPHRRKIKAIQIAS--NGLRNSTMHSNCV--R 65
Query: 58 ADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXXXXXXXXXLNSFLS 117
AD C K TS GLN +++ YK +FPY+ P RV+ FSNA +NS S
Sbjct: 66 ADLLCTKLTSLGLNEHSNTGYKHNFPYKNPVRVTLMKFSNASASMLEEMMVEEEVNSSHS 125
Query: 118 HETQARAVPVAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKKEMNDPSKFERKIGS 177
E Q R V VAP N E STTA +R L+GGDNRGWT KNKLAEGKKEMN +++ERK
Sbjct: 126 SEMQVRKVDVAPCNPELSTTATERKLAGGDNRGWTLAKNKLAEGKKEMNGTNRYERKSNG 185
Query: 178 SYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXXXITDSETVVRQFNE 237
S+ SNRF S+G++Q S + +SNLV Q TDSETVV QFNE
Sbjct: 186 SHVSNRFASIGRRQGSSTDVVSNLVRQGHGEHVSSSVQYSVLNNSKMFTDSETVVHQFNE 245
Query: 238 SSLEISEEKITRVNGDCSFDVTTEESSNATIPREAHGTDKSRLRDRLCSIYEDILVVDNI 297
S+LEISEEKIT+VNGD + T +S++ T R+A TD+S+LRDRLC IYEDILVVDNI
Sbjct: 246 SALEISEEKITKVNGDDVSEETAMDSTDVTFDRKARRTDQSKLRDRLCRIYEDILVVDNI 305
Query: 298 PLAEEVAKMLTGKYQHLIYACDTEV 322
PLAEEV KM+T KY+HLIYACDTEV
Sbjct: 306 PLAEEVVKMITVKYRHLIYACDTEV 330
>Medtr5g092100.2 | PolI-like B DNA polymerase | HC |
chr5:40221218-40213069 | 20130731
Length = 932
Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/325 (51%), Positives = 203/325 (62%), Gaps = 8/325 (2%)
Query: 2 LRPFCPX----XXXXXXXXXXXXXXXXXXXHRRKMKLIQIVNKYNGIRNFTVPSNYIQFR 57
LRP+CP HRRK+K IQI + NG+RN T+ SN + R
Sbjct: 10 LRPYCPLCCRLSRPFSLSLSSCSSLVSLTPHRRKIKAIQIAS--NGLRNSTMHSNCV--R 65
Query: 58 ADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXXXXXXXXXLNSFLS 117
AD C K TS GLN +++ YK +FPY+ P RV+ FSNA +NS S
Sbjct: 66 ADLLCTKLTSLGLNEHSNTGYKHNFPYKNPVRVTLMKFSNASASMLEEMMVEEEVNSSHS 125
Query: 118 HETQARAVPVAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKKEMNDPSKFERKIGS 177
E Q R V VAP N E STTA +R L+GGDNRGWT KNKLAEGKKEMN +++ERK
Sbjct: 126 SEMQVRKVDVAPCNPELSTTATERKLAGGDNRGWTLAKNKLAEGKKEMNGTNRYERKSNG 185
Query: 178 SYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXXXITDSETVVRQFNE 237
S+ SNRF S+G++Q S + +SNLV Q TDSETVV QFNE
Sbjct: 186 SHVSNRFASIGRRQGSSTDVVSNLVRQGHGEHVSSSVQYSVLNNSKMFTDSETVVHQFNE 245
Query: 238 SSLEISEEKITRVNGDCSFDVTTEESSNATIPREAHGTDKSRLRDRLCSIYEDILVVDNI 297
S+LEISEEKIT+VNGD + T +S++ T R+A TD+S+LRDRLC IYEDILVVDNI
Sbjct: 246 SALEISEEKITKVNGDDVSEETAMDSTDVTFDRKARRTDQSKLRDRLCRIYEDILVVDNI 305
Query: 298 PLAEEVAKMLTGKYQHLIYACDTEV 322
PLAEEV KM+T KY+HLIYACDTEV
Sbjct: 306 PLAEEVVKMITVKYRHLIYACDTEV 330
>Medtr3g050140.6 | PolI-like B DNA polymerase | HC |
chr3:19745648-19761392 | 20130731
Length = 1077
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 156/308 (50%), Gaps = 27/308 (8%)
Query: 37 IVNKYNGIRNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFS 96
+++KY + + +++QFR S C KR S+GL + NDM Y + P + F T S
Sbjct: 32 LLSKYTLSLHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTAS 90
Query: 97 NAXXXXXXXXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREK 155
+ L+S S++ Q R + ++ S T +R LSG D GW
Sbjct: 91 FSTLKVTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAG 148
Query: 156 NKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXX 215
+KL + K EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 149 HKLTQIKMEMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQ 206
Query: 216 XXXXXXXXXITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCS 255
+ D+E V + N SSL+ SEEKI V+G+ S
Sbjct: 207 HSMLNNSMLLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHS 266
Query: 256 FDVTTEESSNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHL 314
D T ++++ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HL
Sbjct: 267 LDATAKDATKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHL 326
Query: 315 IYACDTEV 322
I+ACDTEV
Sbjct: 327 IHACDTEV 334
>Medtr3g050140.1 | PolI-like B DNA polymerase | HC |
chr3:19747543-19761369 | 20130731
Length = 1158
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 156/308 (50%), Gaps = 27/308 (8%)
Query: 37 IVNKYNGIRNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFS 96
+++KY + + +++QFR S C KR S+GL + NDM Y + P + F T S
Sbjct: 113 LLSKYTLSLHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTAS 171
Query: 97 NAXXXXXXXXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREK 155
+ L+S S++ Q R + ++ S T +R LSG D GW
Sbjct: 172 FSTLKVTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAG 229
Query: 156 NKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXX 215
+KL + K EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 230 HKLTQIKMEMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQ 287
Query: 216 XXXXXXXXXITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCS 255
+ D+E V + N SSL+ SEEKI V+G+ S
Sbjct: 288 HSMLNNSMLLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHS 347
Query: 256 FDVTTEESSNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHL 314
D T ++++ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HL
Sbjct: 348 LDATAKDATKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHL 407
Query: 315 IYACDTEV 322
I+ACDTEV
Sbjct: 408 IHACDTEV 415
>Medtr3g050140.3 | PolI-like B DNA polymerase | HC |
chr3:19745644-19761421 | 20130731
Length = 1087
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 45 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 104
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 50 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 108
Query: 105 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 163
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 109 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 166
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 167 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 224
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 225 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 284
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 285 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 344
>Medtr3g050140.5 | PolI-like B DNA polymerase | HC |
chr3:19745644-19761421 | 20130731
Length = 1040
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 45 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 104
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 3 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 61
Query: 105 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 163
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 62 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 119
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 120 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 177
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 178 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 237
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 238 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 297
>Medtr3g050140.2 | PolI-like B DNA polymerase | HC |
chr3:19745643-19761421 | 20130731
Length = 1040
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 45 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 104
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 3 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 61
Query: 105 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 163
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 62 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 119
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 120 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 177
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 178 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 237
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 238 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 297
>Medtr3g050140.4 | PolI-like B DNA polymerase | HC |
chr3:19745644-19761421 | 20130731
Length = 1040
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 45 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 104
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 3 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 61
Query: 105 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 163
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 62 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 119
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 120 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 177
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 178 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 237
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 238 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 297
>Medtr3g050140.9 | PolI-like B DNA polymerase | HC |
chr3:19745644-19761421 | 20130731
Length = 1040
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 152/300 (50%), Gaps = 27/300 (9%)
Query: 45 RNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPGRVSFKTFSNAXXXXXX 104
R+ + +++QFR S C KR S+GL + NDM Y + P + F T S +
Sbjct: 3 RHRNLSGSFLQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-SVMKFSTASFSTLKVTN 61
Query: 105 XXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKK 163
L+S S++ Q R + ++ S T +R LSG D GW +KL + K
Sbjct: 62 QTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKM 119
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 120 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 177
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 178 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 237
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 238 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 297
>Medtr3g050110.1 | PolI-like B DNA polymerase | HC |
chr3:19732012-19740084 | 20130731
Length = 1055
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 158/319 (49%), Gaps = 35/319 (10%)
Query: 29 RRKMKLIQIVNKYNGIRNFTVPSNYIQFRADSCCLKRTSWGLNRYNDMRYKCSFPYETPG 88
RRK K IQI + + RN + S +QFR S C KR S+GL + NDM Y + P
Sbjct: 4 RRKSKSIQIASNFLRHRNLSGSS--LQFREGSYCPKRISFGLKKCNDMEYHRNSPVHI-S 60
Query: 89 RVSFKTFSNAXXXXXXXXXXXXXLNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGD 147
+ F T S + L+S S++ Q R + ++ S T +R LSG D
Sbjct: 61 VMKFSTASFSTLKVTNQTRREEELSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-D 118
Query: 148 NRGWTREKNKLAEGKKEMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXX 207
GW +KL + K EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 119 RTGWAEAGHKLTQIKMEMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLC 176
Query: 208 XXXXXXXXXXXXXXXXXITDSETVVRQFNESSLEISEEKITRVNG---DCSFDVTTEESS 264
+ D+E V + N SSL+ EEKI V+G + S T+EE
Sbjct: 177 EPASSSVQHSMLNNSMLLIDTERVGTESNVSSLKTGEEKIDGVDGTESNVSSLKTSEEKI 236
Query: 265 N---------------------ATIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEV 303
+ T+ R ++S+LR+RLCSIYEDILVV+NI AE+V
Sbjct: 237 DNVDGNHSLAAAAKDATKAKITVTMTR---SDEQSKLRERLCSIYEDILVVNNISHAEQV 293
Query: 304 AKMLTGKYQHLIYACDTEV 322
AKMLT Y+HLI+ACDTEV
Sbjct: 294 AKMLTVNYRHLIHACDTEV 312
>Medtr3g050140.8 | PolI-like B DNA polymerase | HC |
chr3:19745644-19761421 | 20130731
Length = 1007
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 123/233 (52%), Gaps = 26/233 (11%)
Query: 112 LNSFLSHETQARAVP-VAPYNHEFSTTAAKRALSGGDNRGWTREKNKLAEGKKEMNDPSK 170
L+S S++ Q R + ++ S T +R LSG D GW +KL + K EM+D K
Sbjct: 36 LSSLSSYDRQVRMMTHFGSCSYRLSKTP-RRKLSG-DRTGWAEAGHKLTQIKMEMHDLDK 93
Query: 171 FERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXXXITDSET 230
R + S + +S+ QK A+++N NL+L D + D+E
Sbjct: 94 --RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSMLLIDTER 151
Query: 231 VVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEESSNATIP- 269
V + N SSL+ SEEKI V+G+ S D T ++++ A +
Sbjct: 152 VGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDATKAKLTV 211
Query: 270 REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 212 RMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 264
>Medtr3g050140.7 | PolI-like B DNA polymerase | HC |
chr3:19745643-19761421 | 20130731
Length = 922
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 23/180 (12%)
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 2 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGRNLMLHDLCEPASSSVQHSMLNNSM 59
Query: 224 XITDSETVVRQFNESSLEI--------------------SEEKITRVNGDCSFDVTTEES 263
+ D+E V + N SSL+ SEEKI V+G+ S D T +++
Sbjct: 60 LLIDTERVGTESNVSSLKTGEEKIHGVDGTESNVSSLKTSEEKIDNVDGNHSLDATAKDA 119
Query: 264 SNATIP-REAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACDTEV 322
+ A + R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACDTEV
Sbjct: 120 TKAKLTVRMIRSDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACDTEV 179
>Medtr3g050110.3 | PolI-like B DNA polymerase | HC |
chr3:19729565-19740524 | 20130731
Length = 922
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 95/183 (51%), Gaps = 29/183 (15%)
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 2 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLCEPASSSVQHSMLNNSM 59
Query: 224 XITDSETVVRQFNESSLEISEEKITRVNG---DCSFDVTTEESSN--------------- 265
+ D+E V + N SSL+ EEKI V+G + S T+EE +
Sbjct: 60 LLIDTERVGTESNVSSLKTGEEKIDGVDGTESNVSSLKTSEEKIDNVDGNHSLAAAAKDA 119
Query: 266 ------ATIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACD 319
T+ R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACD
Sbjct: 120 TKAKITVTMTR---SDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACD 176
Query: 320 TEV 322
TEV
Sbjct: 177 TEV 179
>Medtr3g050110.2 | PolI-like B DNA polymerase | HC |
chr3:19729560-19740468 | 20130731
Length = 922
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 95/183 (51%), Gaps = 29/183 (15%)
Query: 164 EMNDPSKFERKIGSSYASNRFTSVGQKQAVSKNAISNLVLQDXXXXXXXXXXXXXXXXXX 223
EM+D K R + S + +S+ QK A+++N NL+L D
Sbjct: 2 EMHDLDK--RSLYPSNTNTIASSIAQKPAITQNEGHNLMLHDLCEPASSSVQHSMLNNSM 59
Query: 224 XITDSETVVRQFNESSLEISEEKITRVNG---DCSFDVTTEESSN--------------- 265
+ D+E V + N SSL+ EEKI V+G + S T+EE +
Sbjct: 60 LLIDTERVGTESNVSSLKTGEEKIDGVDGTESNVSSLKTSEEKIDNVDGNHSLAAAAKDA 119
Query: 266 ------ATIPREAHGTDKSRLRDRLCSIYEDILVVDNIPLAEEVAKMLTGKYQHLIYACD 319
T+ R ++S+LR+RLCSIYEDILVV+NI AE+VAKMLT Y+HLI+ACD
Sbjct: 120 TKAKITVTMTR---SDEQSKLRERLCSIYEDILVVNNISHAEQVAKMLTVNYRHLIHACD 176
Query: 320 TEV 322
TEV
Sbjct: 177 TEV 179