Miyakogusa Predicted Gene

Lj0g3v0229569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0229569.1 Non Characterized Hit- tr|I1NIE0|I1NIE0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,59.26,4e-19,ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich
,ZF-HD homeobox protein, Cys/His-rich dimerisation,CUFF.15004.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077020.1 | homeobox domain, ZF-HD class protein | HC | ch...    90   6e-19
Medtr4g134580.1 | homeobox domain, ZF-HD class protein | HC | ch...    83   6e-17
Medtr5g032600.1 | homeobox domain, ZF-HD class protein | HC | ch...    79   8e-16
Medtr3g100650.1 | homeobox domain, ZF-HD class protein | HC | ch...    74   3e-14
Medtr5g065440.1 | homeobox domain, ZF-HD class protein | HC | ch...    73   6e-14
Medtr8g069080.1 | homeobox domain, ZF-HD class protein | LC | ch...    72   1e-13
Medtr5g020510.1 | homeobox domain, ZF-HD class protein | HC | ch...    72   2e-13
Medtr2g076780.1 | homeobox domain, ZF-HD class protein | LC | ch...    69   7e-13
Medtr8g467340.1 | homeobox domain, ZF-HD class protein | HC | ch...    66   9e-12
Medtr6g012280.1 | transcription factor HB29-like protein | HC | ...    62   1e-10
Medtr3g039810.1 | mini zinc finger protein | HC | chr3:13902641-...    62   1e-10
Medtr7g010300.1 | homeobox domain, ZF-HD class protein | HC | ch...    61   2e-10
Medtr7g070643.1 | ZF-HD protein dimerization region protein | HC...    58   2e-09
Medtr6g012220.1 | ZF-HD protein dimerization region protein | HC...    56   6e-09
Medtr6g073013.1 | zinc finger homeodomain protein | HC | chr6:27...    52   9e-08
Medtr6g080300.1 | ZF-HD protein dimerization region protein | HC...    52   1e-07
Medtr8g442330.1 | ZF-HD protein dimerization region protein | LC...    48   2e-06
Medtr2g007810.1 | ZF-HD protein dimerization region protein | LC...    46   8e-06

>Medtr1g077020.1 | homeobox domain, ZF-HD class protein | HC |
          chr1:34371555-34370690 | 20130731
          Length = 191

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 44/51 (86%)

Query: 24 LEKKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          +EKKI++ YKECLKNHAA IGGNA DGC EFMP+G+  TL+ALKC ACNCH
Sbjct: 1  MEKKIVVKYKECLKNHAATIGGNAIDGCGEFMPSGENDTLEALKCCACNCH 51


>Medtr4g134580.1 | homeobox domain, ZF-HD class protein | HC |
           chr4:56377888-56378985 | 20130731
          Length = 365

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 41/43 (95%)

Query: 32  YKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           Y+ECLKNHAAA+GGNATDGC EFMP+G++GT++AL CSAC+CH
Sbjct: 113 YRECLKNHAAAMGGNATDGCGEFMPSGEQGTIEALNCSACHCH 155


>Medtr5g032600.1 | homeobox domain, ZF-HD class protein | HC |
           chr5:14022399-14021147 | 20130731
          Length = 272

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 38/43 (88%)

Query: 32  YKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           Y+ECLKNHA  IGG+A DGC EFMPAG EGTL++LKC+ACNCH
Sbjct: 78  YRECLKNHAVGIGGHALDGCGEFMPAGSEGTLESLKCAACNCH 120


>Medtr3g100650.1 | homeobox domain, ZF-HD class protein | HC |
           chr3:46301626-46300635 | 20130731
          Length = 274

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 30/45 (66%), Positives = 38/45 (84%)

Query: 30  ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           + YKEC KNHA +IGG+A DGCCEF+ AG+EGTL+A+ C+AC CH
Sbjct: 78  VRYKECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACGCH 122


>Medtr5g065440.1 | homeobox domain, ZF-HD class protein | HC |
           chr5:27507932-27508738 | 20130731
          Length = 268

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 30  ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           + Y+EC KNHA + GG+A DGCCEF+ AG+EGTL+A+ C+ACNCH
Sbjct: 56  VRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCH 100


>Medtr8g069080.1 | homeobox domain, ZF-HD class protein | LC |
           chr8:28906092-28905286 | 20130731
          Length = 268

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 9/75 (12%)

Query: 5   TFVEASKDMECSDFHV-----DKSLEKKIIISYKECLKNHAAAIGGNATDGCCEFMPAGD 59
           ++VE +K +   D          S E+K    +KEC KNHA++IGG A DGC EF+PAG 
Sbjct: 41  SYVETTKTLNHHDEETLMNSQSNSFEEK----FKECRKNHASSIGGYALDGCGEFLPAGI 96

Query: 60  EGTLDALKCSACNCH 74
           EGT++  KC+ACNCH
Sbjct: 97  EGTIEFFKCAACNCH 111


>Medtr5g020510.1 | homeobox domain, ZF-HD class protein | HC |
           chr5:7836628-7838042 | 20130731
          Length = 297

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 36/45 (80%)

Query: 30  ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           I Y+ECL+NHAA++G +  DGC EFMP+G+EGT    KC+AC+CH
Sbjct: 97  ICYRECLRNHAASMGSHVVDGCGEFMPSGEEGTPQYFKCAACDCH 141


>Medtr2g076780.1 | homeobox domain, ZF-HD class protein | LC |
          chr2:32143099-32142386 | 20130731
          Length = 237

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 7/74 (9%)

Query: 5  TFVEASKDMECSDFHVDKSL----EKKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDE 60
          ++VE +     S+ HV+++L          ++KEC KNHA++IGG A DGC EF+PAG E
Sbjct: 9  SYVETTT---TSNDHVEETLMNSQSNSFERNFKECRKNHASSIGGYALDGCGEFLPAGIE 65

Query: 61 GTLDALKCSACNCH 74
          GT++   C+ACNCH
Sbjct: 66 GTIEFFTCAACNCH 79


>Medtr8g467340.1 | homeobox domain, ZF-HD class protein | HC |
           chr8:24180617-24182295 | 20130731
          Length = 391

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)

Query: 28  IIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLD--ALKCSACNCH 74
           +++SYKECLKNHAA++GG+A DGC EFMP       D  +LKC+AC CH
Sbjct: 60  MVVSYKECLKNHAASLGGHALDGCGEFMPPSSLNPNDPRSLKCAACGCH 108


>Medtr6g012280.1 | transcription factor HB29-like protein | HC |
           chr6:3684710-3683161 | 20130731
          Length = 333

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)

Query: 31  SYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLD--ALKCSACNCH 74
           +YKECLKNH A +GG+A DGCCEFMP+    + D  ++KC+AC CH
Sbjct: 90  TYKECLKNHVATLGGHALDGCCEFMPSPTATSDDPASIKCAACGCH 135


>Medtr3g039810.1 | mini zinc finger protein | HC |
          chr3:13902641-13901150 | 20130731
          Length = 85

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 31/45 (68%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          I Y EC KNHAA IGG A DGC EFM +  EGT  AL C+AC CH
Sbjct: 18 IRYGECQKNHAANIGGYAVDGCREFMASTGEGTSGALTCAACGCH 62


>Medtr7g010300.1 | homeobox domain, ZF-HD class protein | HC |
           chr7:2495416-2494003 | 20130731
          Length = 341

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 2/50 (4%)

Query: 27  KIIISYKECLKNHAAAIGGNATDGCCEFM--PAGDEGTLDALKCSACNCH 74
           +  I+YKECLKNHAA +GG+A DGC EFM  P        +LKC+AC CH
Sbjct: 83  QPTITYKECLKNHAANLGGHALDGCGEFMTSPTATPTDPTSLKCAACGCH 132


>Medtr7g070643.1 | ZF-HD protein dimerization region protein | HC |
           chr7:26145412-26146440 | 20130731
          Length = 184

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 31/41 (75%)

Query: 30  ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSA 70
           + Y EC KNHA + GG+A DGCCEF+ AG+EGTL+   C+A
Sbjct: 80  MRYLECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEVAICAA 120


>Medtr6g012220.1 | ZF-HD protein dimerization region protein | HC
          | chr6:3642929-3643608 | 20130731
          Length = 81

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 4/49 (8%)

Query: 26 KKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          ++ ++ Y EC KNHAA +GG A DGC EFMP+    T  +L C+AC CH
Sbjct: 15 QRSVVKYGECQKNHAANVGGYAVDGCREFMPS----TNGSLTCAACGCH 59


>Medtr6g073013.1 | zinc finger homeodomain protein | HC |
          chr6:27099329-27098575 | 20130731
          Length = 179

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 32 YKECLKNHAAAIGGNATDGCCEF-MPAGDEGTLDALKCSACNCH 74
          Y+ECL+NHAA++G  ATDGC EF +       +++L+C+AC CH
Sbjct: 19 YRECLRNHAASLGSYATDGCGEFTIDDSSPSAVNSLQCAACGCH 62


>Medtr6g080300.1 | ZF-HD protein dimerization region protein | HC
          | chr6:30231887-30232423 | 20130731
          Length = 92

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 28 IIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSA 70
          + + Y+EC KNH  + GG+  DG CEF+ A +EGTL+A+ C+A
Sbjct: 50 LTMRYRECQKNHVVSFGGHVVDGSCEFIAADEEGTLEAVICAA 92


>Medtr8g442330.1 | ZF-HD protein dimerization region protein | LC
          | chr8:15978437-15978856 | 20130731
          Length = 139

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 25/34 (73%)

Query: 41 AAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          ++IGG + DGC EF+PAG EG  +  KC+AC CH
Sbjct: 14 SSIGGYSLDGCREFLPAGAEGATNFFKCTACKCH 47


>Medtr2g007810.1 | ZF-HD protein dimerization region protein | LC
          | chr2:1148474-1148196 | 20130731
          Length = 92

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 37 KNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSA 70
          K    + GG+A DGCCEF+ AG+EGTL+A+ C+A
Sbjct: 14 KRGRESFGGHAVDGCCEFIAAGEEGTLEAVICAA 47