Miyakogusa Predicted Gene

Lj0g3v0229489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0229489.1 CUFF.14999.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g088170.1 | BTB/POZ domain plant protein | HC | chr7:34314...   295   3e-80
Medtr8g098485.1 | BTB/POZ domain plant protein | HC | chr8:41080...    87   1e-17

>Medtr7g088170.1 | BTB/POZ domain plant protein | HC |
           chr7:34314692-34316625 | 20130731
          Length = 478

 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 153/210 (72%), Positives = 168/210 (80%), Gaps = 9/210 (4%)

Query: 1   MVPGKLTWVPATGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWETSEPXXXXXXXXXXXX 60
           MVPGKLT+VP TGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWET+EP            
Sbjct: 269 MVPGKLTFVPTTGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWETNEPGAGRSSRFGDSF 328

Query: 61  AAVGVDVEGLLLFKVCSKSGDVAMADMRLLGDDPWVYLNEKNPSLVASGVDGS-SNVLHC 119
           +A+ VDVE LLLFK+CSKSGD+AMADMR LGDDPWVYL EKNPSL   G DGS S+V++C
Sbjct: 329 SAIDVDVEKLLLFKLCSKSGDLAMADMRRLGDDPWVYLKEKNPSLWTDGGDGSTSSVVNC 388

Query: 120 YKGQVFVGRGGELEVWSRLREA--------GSENAEGFYRRNFVDKRGDSERGVIKKIEG 171
           YKGQVFVGRGGELEVWSR++E            + EG YRRNFVDKR DSE+GVI KIEG
Sbjct: 389 YKGQVFVGRGGELEVWSRVKEVVECESERDRESDGEGVYRRNFVDKREDSEKGVIVKIEG 448

Query: 172 GGDRLFVSREGVEGIEVWESSHSVKSISVL 201
           GGDRLF+SRE VEGIEVWESSH   +ISVL
Sbjct: 449 GGDRLFISREDVEGIEVWESSHYAGAISVL 478


>Medtr8g098485.1 | BTB/POZ domain plant protein | HC |
           chr8:41080261-41078413 | 20130731
          Length = 456

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 13/190 (6%)

Query: 5   KLTWVPATGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWETSEPXXXXXXXXXXXXAAVG 64
           KL W+ +  +L+ S    G  G SG +R+WD RSG VVWE SE             A V 
Sbjct: 274 KLQWIESHNLLMASGSHSGPSGVSGNVRLWDVRSGNVVWEISE--------KVDCFADVT 325

Query: 65  VDVEGLLLFKVCSKSGDVAMADMRLLGD--DPWVYLNEKNPSLVASGVDGSSNVLHCYKG 122
           V      +FKV   SG+    D++ L    + WV L +K   L     +G    +     
Sbjct: 326 VSDSLDAMFKVGVNSGEAFYMDLKNLSSEKNSWVCLGDKRKVLNGKK-EGFGCKIETQGN 384

Query: 123 QVFVGRGGELEVWSRLREAGSENAEGFYRRNFVDKRGDSERGVIKKIEGGGDRLFVSREG 182
           QVF  +GG++E+WS +    S N    +++N + +  D     I  +  GG R+F++R+ 
Sbjct: 385 QVFCTKGGDVELWSDIIMGSSNNR--IFKKNLMGRVQDMGGAKITNLAFGGSRMFLTRKD 442

Query: 183 VEGIEVWESS 192
           ++ +EVW+SS
Sbjct: 443 LQCVEVWQSS 452