Miyakogusa Predicted Gene

Lj0g3v0228939.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0228939.1 tr|B9PCF4|B9PCF4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_795095 PE=4 SV=1,61.76,6e-17,GB
DEF: F14N23.28,NULL; FAMILY NOT NAMED,NULL; seg,NULL; Cullin
repeat-like,Cullin repeat-like-conta,CUFF.14945.1
         (445 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111120.1 | exocyst complex component 84B | HC | chr1:5018...   646   0.0  
Medtr6g045363.1 | exocyst complex component 84B | HC | chr6:1629...   618   e-177
Medtr4g005930.1 | exocyst complex component 84B | HC | chr4:4382...   361   e-100
Medtr4g083940.1 | plant/F14N23-6 protein | HC | chr4:32655916-32...   133   3e-31
Medtr1g069620.1 | hypothetical protein | HC | chr1:30277729-3027...    86   1e-16

>Medtr1g111120.1 | exocyst complex component 84B | HC |
           chr1:50183616-50188984 | 20130731
          Length = 754

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/447 (72%), Positives = 366/447 (81%), Gaps = 3/447 (0%)

Query: 1   MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILNEKTDISKTEKWLIGYLETLEVL 60
           MRNLLS QAALVHG+A+GCQL SL+TGNEDSDMD+I+NEKTDISKTEKWLIGYLETL VL
Sbjct: 105 MRNLLSNQAALVHGLAEGCQLGSLVTGNEDSDMDDIINEKTDISKTEKWLIGYLETLNVL 164

Query: 61  LAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQA 120
           LAEKRVDE+M AL+EGEKMA+EI +G+T LSPSLF+ALQ+AITEHRQKLA QLAET+ Q 
Sbjct: 165 LAEKRVDESMVALEEGEKMAKEIKQGKT-LSPSLFQALQNAITEHRQKLADQLAETICQP 223

Query: 121 STRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAYTSALSQL 180
           STR  EIR+TALALK LGDGPRAHTLLL SH++KL+R MQS+ ST+YGGV AYT+++S L
Sbjct: 224 STRGTEIRTTALALKNLGDGPRAHTLLLKSHRKKLKRNMQSLESTTYGGVSAYTASISHL 283

Query: 181 VFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLRIAS 240
           VFSTISQA SDSLT+F+ EEPAYTSELV+WAV Q+E F+LLLKK+ILAS AA GGLRIAS
Sbjct: 284 VFSTISQAVSDSLTIFSGEEPAYTSELVTWAVRQAETFSLLLKKQILASIAATGGLRIAS 343

Query: 241 ECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXXXXXX 300
           ECVHVCL+HCHLLEASGM LSPVLLKHF+PFVEQALNTNLKRIEQSS             
Sbjct: 344 ECVHVCLSHCHLLEASGMALSPVLLKHFRPFVEQALNTNLKRIEQSSAALAAADDWLLAY 403

Query: 301 XPTSR--SSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXXXXX 358
            PTSR  ++GL P SSYS+L+S+QPKLS SAHKFNSMVQELFEDVG LE           
Sbjct: 404 APTSRNTNTGLRPVSSYSSLNSYQPKLSISAHKFNSMVQELFEDVGTLEILQLDGLALEG 463

Query: 359 XXXVFGFYVNLLIDALPASIVTENLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXXXPRA 418
              VF FYV LLI+A+P S VTENLE +GHKIVKIAETE+QQI              PRA
Sbjct: 464 LHQVFNFYVKLLINAMPGSAVTENLESTGHKIVKIAETEKQQIALLANAILLADELLPRA 523

Query: 419 VVKLSHSTRGDESQRRGPDKQRPPEQR 445
           V+KLSH T+GD+S +R  DKQRPPEQR
Sbjct: 524 VIKLSHGTKGDDSHKRVSDKQRPPEQR 550


>Medtr6g045363.1 | exocyst complex component 84B | HC |
           chr6:16298312-16292569 | 20130731
          Length = 761

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 317/450 (70%), Positives = 359/450 (79%), Gaps = 9/450 (2%)

Query: 1   MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILNEKTDISKTEKWLIGYLETLEVL 60
           MRNLLS QAALVHG+A+GCQL SL+TGNE SD+D IL EKTDIS TEKWLI YLETL+VL
Sbjct: 109 MRNLLSNQAALVHGLAEGCQLGSLVTGNEGSDIDAILKEKTDISNTEKWLIEYLETLDVL 168

Query: 61  LAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQA 120
           LAEKRV+E+MAAL+EGEKM  EI++G+T LSPSLF+ALQ+AITEHRQKLA QLA+T+ Q 
Sbjct: 169 LAEKRVEESMAALEEGEKMTNEITQGKT-LSPSLFQALQNAITEHRQKLADQLADTICQP 227

Query: 121 STRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAYTSALSQL 180
           STR AEIRSTALALK LGDGPRAHTLLL S+KEKL R +QS+ ST+   V AYT+++S L
Sbjct: 228 STRRAEIRSTALALKNLGDGPRAHTLLLKSYKEKLNRNIQSLESTT---VSAYTASVSHL 284

Query: 181 VFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLRIAS 240
           VFSTISQA SDSLTVFA EEPAYTSELV+WAV Q+E+F+LLLKK+ILAS AA+GGLRIA 
Sbjct: 285 VFSTISQATSDSLTVFAGEEPAYTSELVTWAVIQAENFSLLLKKQILASIAASGGLRIAL 344

Query: 241 ECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXXXXXX 300
           ECVHVCL HCHLLE+SGM LSPVLLKHF+PFVEQAL TNLKRIEQSS             
Sbjct: 345 ECVHVCLTHCHLLESSGMALSPVLLKHFRPFVEQALITNLKRIEQSSAALASADDWLLAY 404

Query: 301 XPTSRS----SGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXXX 356
            PT+R+    +GLPP SSYSNL+S QPKLS SAHKFNSMVQELFED GPLE         
Sbjct: 405 APTTRTRKSNTGLPPVSSYSNLNSHQPKLSISAHKFNSMVQELFEDAGPLEILQLDGLAL 464

Query: 357 XXXXXVFGFYVNLLIDALPASIVTENLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXXXP 416
                VF FYVNLLI+A+P S VTENLE +GHKIVKIAETE QQI              P
Sbjct: 465 EGLHQVFNFYVNLLINAMPGSAVTENLESTGHKIVKIAETETQQIALLGNAILLADELLP 524

Query: 417 RAVVKLSHSTRG-DESQRRGPDKQRPPEQR 445
           RAV+KLSHST+G D+S +R  DKQ+PPEQR
Sbjct: 525 RAVIKLSHSTKGDDDSLKRASDKQKPPEQR 554


>Medtr4g005930.1 | exocyst complex component 84B | HC |
           chr4:438240-428169 | 20130731
          Length = 764

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/455 (50%), Positives = 298/455 (65%), Gaps = 22/455 (4%)

Query: 1   MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDN--ILNEKTDISKTEKWLIGYLETLE 58
           +RNLLSTQA L+HG+ADG  + SL   + D    N  + +E  +IS  +KWL+ + + L+
Sbjct: 101 IRNLLSTQATLIHGLADGVHIDSLSISDSDGFSVNGALDSEHKEISDLDKWLVEFPDLLD 160

Query: 59  VLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLS 118
           VLLAE+RV+EA+AALDEGE++  E  E ++     L  +LQ +ITE RQKLA QLAE   
Sbjct: 161 VLLAERRVEEALAALDEGERVVSEAKEMKSLNPSLL-LSLQSSITERRQKLADQLAEAAC 219

Query: 119 QASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIH--STSYGGVGAYTSA 176
           Q STR AE+R++  ALK LGDGP AH+LLLN+H ++ Q  MQS+   +TSYG  GAYT+A
Sbjct: 220 QPSTRGAELRASVSALKKLGDGPHAHSLLLNAHLQRYQYNMQSLRPSNTSYG--GAYTAA 277

Query: 177 LSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGL 236
           L+QLVFS ++QAASDSL +F  EEPAY+SELV WA  Q+E FALL+K+  LAS+AAAGGL
Sbjct: 278 LAQLVFSAVAQAASDSLAIFG-EEPAYSSELVMWATKQTEAFALLVKRHALASSAAAGGL 336

Query: 237 RIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXX 296
           R A+ECV + L HC LLEA G+ L PVLLK F+P VEQAL+ NLKRI++S+         
Sbjct: 337 RAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAAMAAADDW 396

Query: 297 XXXXXP-TSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXX 355
                P  +R +G        + ++FQ KL+SSAH+FN MVQ+ FEDVGPL S       
Sbjct: 397 VLTYPPNVNRQTG--------STTAFQLKLTSSAHRFNLMVQDFFEDVGPLLSMQLGGQA 448

Query: 356 XXXXXXVFGFYVNLLIDALP-ASIVTENLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXX 414
                 VF  YVN+LI ALP +    E+ E SG+KIV++AETE QQI             
Sbjct: 449 LEGLFQVFNSYVNMLIKALPESMEEEESFEDSGNKIVRMAETEAQQIALLANASLLADEL 508

Query: 415 XPRAVVKLS---HSTRGDESQRRGPDKQ-RPPEQR 445
            PRA +KLS        D+++RR  ++Q R PEQR
Sbjct: 509 LPRAAMKLSSLNQDPYKDDNRRRTTERQNRHPEQR 543


>Medtr4g083940.1 | plant/F14N23-6 protein | HC |
           chr4:32655916-32662112 | 20130731
          Length = 773

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 18/372 (4%)

Query: 53  YLETLEVLLAEKRVDEAMAALDEGEKMAQE--ISEGRTTLSPSLFKALQDAITEHRQKLA 110
           +LE ++VLLAE + +EA+ ALD  EK + E  +S   ++   S +K+   A+ E +  L 
Sbjct: 134 FLENIDVLLAEHKFEEALEALDAEEKNSAELKVSGNNSSDEGSAYKS---ALIERKAVLE 190

Query: 111 GQLAETLSQASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGV 170
            QL     Q S    E++     L  LG GP AH L+L  +   LQ+ ++++  +S    
Sbjct: 191 DQLVGIAEQPSVSFPELKKALDGLIKLGKGPVAHQLMLKFYGSHLQKRIEALLPSSSFCP 250

Query: 171 GAYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILAST 230
             +   LS+++FS IS    +S  +F  + P YT+ +V WA  + E+F  L+K+    S+
Sbjct: 251 ETFPFTLSKMIFSVISMTIKESGLIFG-DNPVYTNRIVQWAEWEIEYFVRLVKENA-PSS 308

Query: 231 AAAGGLRIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXX 290
                LR AS C+   L +C +LE  G+ +S +LL   +P VE+ L +N +R    +   
Sbjct: 309 ETVSALRSASICIQASLKYCSILEPQGLKMSKLLLVLLRPSVEEVLESNFRR----ARRV 364

Query: 291 XXXXXXXXXXXPTS--RSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLES 348
                      P S   +S L   ++ SN       L  S  +F  +V+E+ E + P+  
Sbjct: 365 VLDMAESAECLPLSPQFASSLSAIATTSN-----SMLVESGMRFMHIVEEILEQLTPMAV 419

Query: 349 XXXXXXXXXXXXXVFGFYVNLLIDALPASIVTENLEGSGHKIVKIAETEEQQIXXXXXXX 408
                        +F  Y+++LI ALP     +NL      +   AET+ +Q+       
Sbjct: 420 LHFGGNVLGRILQLFDKYMDVLIKALPGPSDDDNLPELKEAVPFRAETDSEQLAILGIAF 479

Query: 409 XXXXXXXPRAVV 420
                  P AV+
Sbjct: 480 TILDELLPNAVL 491


>Medtr1g069620.1 | hypothetical protein | HC |
           chr1:30277729-30273938 | 20130731
          Length = 854

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 137/326 (42%), Gaps = 22/326 (6%)

Query: 55  ETLEVLLAEKRVDEAMAALD---EGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAG 111
           E L++L++E ++DEA+  L+   E E +    S+    L  ++       I+E +  +  
Sbjct: 166 EKLDILMSENKLDEALQLLESAYEDESLTN--SDDEIILYNTM-------ISEKKSMVIK 216

Query: 112 QLAETLSQASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVG 171
           QL + +        E++S    L  LGD   A  LLL  +   +  G  +          
Sbjct: 217 QLVQIVENKRIEGPELKSALATLCRLGDTQLAIHLLLKYYHLCIVTGTNNFQWEDSSMNE 276

Query: 172 AYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTA 231
            Y   L++ VFS ISQAA  S  +   E  AY SEL+ W+  ++  F    +K + +++ 
Sbjct: 277 IYIRKLARFVFSKISQAAK-SFVMLCGETSAYASELMLWSYEETMSFITCFEKFVKSTSE 335

Query: 232 AAGGLRIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXX 291
              GL  A +     + +C LLE   + L P L+    P +E+ LNT++   ++      
Sbjct: 336 VCVGLSSAIKAAKFAVMYCSLLEDQKLMLLPYLVNQLFPCIEEVLNTHINHFKKVIPIFS 395

Query: 292 XXXXXXXXXXPTSRSSGLPPTSSYSNLSSFQPK---LSSSAHKFNSMVQELFEDVGPLES 348
                       S   G   +S+       QP    L+SS  K  +++Q + ED+ PL  
Sbjct: 396 ISDSWILEKYLVSGVFGGAGSSTE------QPDYCLLTSSGRKVLTLLQAIAEDISPLVE 449

Query: 349 XXXXXXXXXXXXXVFGFYVNLLIDAL 374
                        +F  Y+ +L  AL
Sbjct: 450 LEMGNLVISGLKNLFNEYIIILERAL 475