Miyakogusa Predicted Gene

Lj0g3v0228129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0228129.1 Non Characterized Hit- tr|B9G849|B9G849_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.71,5e-19,Cellulose_synt,Cellulose synthase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.14879.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087980.1 | cellulose synthase H1-like protein | HC | chr2...   158   1e-39
Medtr2g087960.1 | cellulose synthase H1-like protein | HC | chr2...   157   4e-39
Medtr4g050000.1 | cellulose synthase H1-like protein | HC | chr4...   117   4e-27
Medtr2g087900.1 | cellulose synthase H1-like protein | HC | chr2...    97   7e-21
Medtr2g087950.1 | cellulose synthase-like protein | HC | chr2:37...    79   2e-15

>Medtr2g087980.1 | cellulose synthase H1-like protein | HC |
           chr2:37046736-37042498 | 20130731
          Length = 740

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/144 (54%), Positives = 95/144 (65%), Gaps = 2/144 (1%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M  +R+++ WFIGF S ML + GISD +FE+TQKE+ TS          RFTFDESP FV
Sbjct: 596 MVTIRSTSVWFIGFLSAMLKLMGISDTIFEVTQKESPTSGAAEDDANAGRFTFDESPAFV 655

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLVQL AL+IK LG+  +   HSGNECG+GE + S+YL++CYWP          Y
Sbjct: 656 VGTTILLVQLTALVIKILGVQLED--HSGNECGIGELMCSVYLVICYWPFLKGLFARGKY 713

Query: 121 GIPFSTICKSAALAFAFVHFCRST 144
           GI  STI KSA  A  FVHFCR T
Sbjct: 714 GIALSTIFKSALFALIFVHFCRIT 737


>Medtr2g087960.1 | cellulose synthase H1-like protein | HC |
           chr2:37037190-37033003 | 20130731
          Length = 750

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/146 (54%), Positives = 96/146 (65%), Gaps = 2/146 (1%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M  MR+++ WFIGF S ML + GISD +FE+TQKE+ TS          RFTFDESP FV
Sbjct: 606 MITMRSTSVWFIGFLSAMLKLLGISDTIFEVTQKESPTSGVIGDDANAGRFTFDESPAFV 665

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLVQL AL++K LG+  +   HSGN CG+GE + S+YL+VCYWP          Y
Sbjct: 666 VGTTILLVQLTALVVKILGV--QLVVHSGNGCGLGELMCSVYLVVCYWPFLKGLFARGKY 723

Query: 121 GIPFSTICKSAALAFAFVHFCRSTVM 146
           GIP STI KSA L F FVHF R  V+
Sbjct: 724 GIPLSTIFKSALLTFIFVHFSRIAVV 749


>Medtr4g050000.1 | cellulose synthase H1-like protein | HC |
           chr4:17654706-17660375 | 20130731
          Length = 743

 Score =  117 bits (293), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 1/147 (0%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           MS +    + F GF + +L + GIS+ VF+IT+KE   S          R+TF+ES VF+
Sbjct: 598 MSRITPMNAGFCGFITVLLKLLGISNTVFDITKKELPPSRDDRHDKNAGRYTFNESLVFL 657

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LL+QL A+ IK  G  P+G + +  ECG+ E + S+YLI+CYWP          +
Sbjct: 658 PGTTILLLQLTAIFIKLFGFQPQGLSRN-YECGLAEMLISVYLIICYWPFLRGLFETGKF 716

Query: 121 GIPFSTICKSAALAFAFVHFCRSTVMG 147
           GIP STICK A L   FV   R T+ G
Sbjct: 717 GIPLSTICKGATLTCIFVCLSRRTISG 743


>Medtr2g087900.1 | cellulose synthase H1-like protein | HC |
           chr2:37012702-37006551 | 20130731
          Length = 755

 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 77/145 (53%), Gaps = 2/145 (1%)

Query: 1   MSIMRTSTSWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPVFV 60
           M  + T  S F+GF + +L    ISD  FEIT+KE   S          RF F+ES +F+
Sbjct: 611 MGRITTMNSCFLGFLTIILKNLRISDTNFEITKKEQVPSNESTNENAG-RFIFNESLIFL 669

Query: 61  AGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXXXY 120
            GTT LLVQL A+   +LG  P   +   +  G GE   S Y+++CY P          Y
Sbjct: 670 PGTTILLVQLIAIFTSWLGWKPLIKS-GADGYGAGEVFCSAYVVLCYLPFLKGLFGKGKY 728

Query: 121 GIPFSTICKSAALAFAFVHFCRSTV 145
           GIP STICKS  LA  FVH C +T+
Sbjct: 729 GIPLSTICKSMVLALLFVHLCGTTI 753


>Medtr2g087950.1 | cellulose synthase-like protein | HC |
           chr2:37028643-37022712 | 20130731
          Length = 781

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 11/135 (8%)

Query: 1   MSIMRTST--SWFIGFFSGMLNIAGISDAVFEITQKETSTSXXXXXXXXXXRFTFDESPV 58
             +MR +T  +WF GF + +L +  IS+ VFEITQK   +S          RF+F+ESP+
Sbjct: 598 QKMMRITTMSAWFFGFLAILLKLLRISEPVFEITQKIDQSSNNG-------RFSFNESPI 650

Query: 59  FVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXXXX 118
           F+  TT L VQL AL     G   +    SG   G GE   S YL+ CY P         
Sbjct: 651 FLPSTTILFVQLTALATSLFGWATR--VGSGLGYGPGEVFCSAYLVACYLPFFKGLFGTG 708

Query: 119 XYGIPFSTICKSAAL 133
            +GIP S I KS  L
Sbjct: 709 KHGIPLSIIFKSVML 723