Miyakogusa Predicted Gene
- Lj0g3v0227659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0227659.1 Non Characterized Hit- tr|A5B3Q6|A5B3Q6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.28,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopep,CUFF.14841.1
(285 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 220 1e-57
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 103 2e-22
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 102 3e-22
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 93 3e-19
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 87 1e-17
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 85 9e-17
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 83 3e-16
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 83 4e-16
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 4e-16
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 82 7e-16
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 79 3e-15
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 79 3e-15
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 79 4e-15
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 7e-15
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 78 8e-15
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 78 8e-15
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 8e-15
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 78 9e-15
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 77 1e-14
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 77 1e-14
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 1e-14
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 77 2e-14
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 77 2e-14
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 76 3e-14
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 76 4e-14
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 76 5e-14
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 75 6e-14
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 75 6e-14
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 75 6e-14
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 8e-14
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 75 8e-14
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 75 8e-14
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 8e-14
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 9e-14
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 75 9e-14
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 1e-13
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 74 1e-13
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 1e-13
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 74 1e-13
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 74 1e-13
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 74 2e-13
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 74 2e-13
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 2e-13
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 3e-13
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 73 4e-13
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 4e-13
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 72 5e-13
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 5e-13
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 72 6e-13
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 72 6e-13
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 72 6e-13
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 6e-13
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 8e-13
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 2e-12
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 70 2e-12
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 70 2e-12
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 2e-12
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 70 2e-12
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 70 2e-12
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 4e-12
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 69 4e-12
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 69 4e-12
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 69 4e-12
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 5e-12
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 69 5e-12
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 5e-12
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 69 5e-12
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 69 6e-12
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 69 7e-12
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 69 7e-12
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 69 7e-12
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 68 8e-12
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 68 9e-12
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 68 1e-11
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 68 1e-11
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 67 1e-11
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 67 2e-11
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 67 2e-11
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 67 2e-11
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 67 2e-11
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-11
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 3e-11
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 3e-11
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 66 3e-11
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 66 3e-11
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 66 4e-11
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 66 4e-11
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 66 4e-11
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 4e-11
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 66 4e-11
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 4e-11
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 5e-11
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 5e-11
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 65 5e-11
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 6e-11
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 65 6e-11
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 65 8e-11
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 65 9e-11
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 65 9e-11
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 1e-10
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 64 1e-10
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 2e-10
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 64 2e-10
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 64 2e-10
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 63 3e-10
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 4e-10
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 63 4e-10
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 63 4e-10
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 62 4e-10
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 62 4e-10
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 62 4e-10
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 62 5e-10
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 62 5e-10
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 62 5e-10
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 5e-10
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 62 5e-10
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 62 6e-10
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 62 7e-10
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 62 7e-10
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 62 7e-10
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 62 8e-10
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 8e-10
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 62 9e-10
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 61 1e-09
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 61 1e-09
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 61 1e-09
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 60 2e-09
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 2e-09
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 2e-09
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 2e-09
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 60 2e-09
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 3e-09
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 59 4e-09
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 59 4e-09
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 6e-09
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 58 1e-08
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 58 1e-08
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 58 1e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 2e-08
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 57 2e-08
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 4e-08
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 56 4e-08
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 5e-08
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 55 7e-08
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 7e-08
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 55 9e-08
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 55 1e-07
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 54 1e-07
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 52 5e-07
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 52 6e-07
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 52 6e-07
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 52 6e-07
Medtr4g081220.1 | PPR containing plant-like protein | HC | chr4:... 52 7e-07
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 7e-07
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 52 8e-07
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 52 8e-07
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 52 8e-07
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 8e-07
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 9e-07
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 51 1e-06
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 51 1e-06
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 50 2e-06
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 50 2e-06
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 50 2e-06
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 50 3e-06
Medtr3g052970.1 | PPR containing plant-like protein | HC | chr3:... 50 3e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 3e-06
Medtr8g098445.1 | PPR containing plant-like protein | HC | chr8:... 49 4e-06
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 49 4e-06
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 49 4e-06
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 49 5e-06
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 49 5e-06
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 49 6e-06
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 6e-06
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 49 6e-06
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 49 7e-06
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 178/294 (60%), Gaps = 25/294 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C +G ++A+ + +M+ GF+P S+VT NAL++G GR EE
Sbjct: 371 TYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVP--------SVVTYNALVNGFCCLGRVEE 422
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A+ +L+ M E GLFPD VS++ V+S F R GEL KA+ +KLEM E + + L
Sbjct: 423 AVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQ 482
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ D++ ++G+ G DEV YT+L+N YC +GE+ KA L DE+ G +
Sbjct: 483 GLCCQRKLSEAFDLFQEMLGR-GLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFL 541
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIENCSNNEFTSLV 230
V Y VLI+GL+KKART+EAKK+LL L Y S P +T++TLIENCS NEF S+V
Sbjct: 542 PDVVTYSVLINGLNKKARTREAKKLLLKLFY---DESVPNDVTYETLIENCSGNEFKSVV 598
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LVKGF ++ L +EA V TM N KPDG VYN +I HCR N KAY+MY
Sbjct: 599 GLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNMY 652
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 137/322 (42%), Gaps = 59/322 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
Y Y ++ G F H ++M KG LP+ VT
Sbjct: 195 YTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKI 254
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+L++ NA+I+GL GR E +E++ M GL PD V++ +V+GF + G
Sbjct: 255 MGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGN 314
Query: 96 LRKAYDLKLEMDEMMQS----------NNMLAIQPLSGDV-YWSLMGKQGGLLDEVNYTS 144
+A L EM S N M ++ LS + SLM +G +E YT+
Sbjct: 315 FHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTT 374
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
L++ +C G + +A +L E+ G V V Y+ L++G R +EA +L +V
Sbjct: 375 LVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVER- 433
Query: 205 CTSSWP-TLTFDTLIE-NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+P +++ T+I C N EL K F+++ LE +L PD
Sbjct: 434 --GLFPDVVSYSTVISLFCRNG------ELGKAFQMK-LEMVEKRIL---------PDAV 475
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
Y+ LI C +A+D++
Sbjct: 476 TYSSLIQGLCCQRKLSEAFDLF 497
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM YC +GE SKA +HD+M+ KGFLPD +VT + LI+GL R E
Sbjct: 511 TYTTLMNGYCVEGELSKALDLHDEMMQKGFLPD--------VVTYSVLINGLNKKARTRE 562
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSG-----FFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
A ++L + P+ V++ ++ F + L K + +K MDE
Sbjct: 563 AKKLLLKLFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGLMDE---------- 612
Query: 119 QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
D + M ++ D Y +I+ +C G V KA + E+ H G V V
Sbjct: 613 ----ADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNMYTEMVHCGFVSHMVTVI 668
Query: 179 VLISGLDKKARTQEAKKMLLSLV 201
LI L K+ E ++ +++
Sbjct: 669 ALIKALSKEGMNDELSSVMQNIL 691
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 49/282 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y +L+ C GEF KA + QMI + E SP+ VT N LI L
Sbjct: 307 VYTYNSLISGMCKLGEFEKAIEILQQMILR--------ECSPNTVTYNTLISALCKENEI 358
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
E A ++ R + GL PD +F ++ G L K D+ +EM E M++
Sbjct: 359 EAATDLARILVSKGLLPDVCTFNTLIQGLC----LSKNQDIAMEMFEEMKN--------- 405
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+G DE Y+ LI++ C + + +A LL E+ G R +V+Y+ LI
Sbjct: 406 -----------KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 454
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL K R ++A+++ + L S ++T++TLI+ L K R+
Sbjct: 455 DGLCKSRRIEDAEEIFDQM--ELLGVSRSSVTYNTLIDG-----------LCKNKRVE-- 499
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
EA+ +++ M+ KPD YN L+ CR + +KA D+
Sbjct: 500 --EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 539
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ LM + ++G+ + A M QM+ G L + V+ L++G GR EE
Sbjct: 204 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLL--------TNVSVKVLVNGFCKEGRVEE 255
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + + E G PD V+F ++V+GF RIG + A D+ +D M++
Sbjct: 256 ALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDI---VDFMIEKG-------FDP 305
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
DVY Y SLI+ C GE KA +L ++ +V Y+ LIS
Sbjct: 306 DVY--------------TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 351
Query: 184 LDKKARTQEAK---KMLLS------------LVYHLCTSSWPTLTFDTLIE----NCSNN 224
L K+ + A ++L+S L+ LC S + + E C +
Sbjct: 352 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 411
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EFT + L+ EA +L M + VYN LI C+ + A +++
Sbjct: 412 EFTYSI-LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIF 470
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 38/273 (13%)
Query: 24 MHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSF 83
+H +M+++G + D + T N LI L + A+ +L M GL PD ++F
Sbjct: 154 LHSKMVNEGIVLD--------VSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITF 205
Query: 84 TAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGK 132
T ++ GF G+L A +K +M ++++ L G V +L + +
Sbjct: 206 TTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE 265
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+G D+V + SL+N +C G V A ++D + G Y+ LISG+ K ++
Sbjct: 266 EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEK 325
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
A ++L ++ C+ + T+T++TLI C NE + +L + + L
Sbjct: 326 AIEILQQMILRECSPN--TVTYNTLISALCKENEIEAATDLARILVSKGL---------- 373
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C N D A +M+
Sbjct: 374 ------LPDVCTFNTLIQGLCLSKNQDIAMEMF 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 19/191 (9%)
Query: 21 AFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDT 80
A M ++M +KG PD EF+ S+ LI L + R +EAL +L+ M G +
Sbjct: 396 AMEMFEEMKNKGCKPD---EFTYSI-----LIDSLCYERRLKEALMLLKEMESSGCARNA 447
Query: 81 VSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSL 129
V + ++ G + + A ++ +M+ + S + + L
Sbjct: 448 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 507
Query: 130 MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKAR 189
M +G D+ Y SL+ +C G++ KA ++ + G Y LI GL + R
Sbjct: 508 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR 567
Query: 190 TQEAKKMLLSL 200
A K+L S+
Sbjct: 568 VDVASKLLRSV 578
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 52/301 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ C+KG+ KAF D+M+++G + S+ T N LIH L R
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVA--------SVFTYNLLIHALFLEKRI 373
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EEA ++++ M E G+ PD V++ ++G+ R G +KA L DEM++ N I+P
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSL---FDEMVEKN----IRP- 425
Query: 122 SGDVYWSLMG-------------------KQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+ + Y SL+ K+G L D + + +LI+ +C +G + +A LL
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
E+ + V V ++ L+ G ++ + +EAKK+L D + E
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLL-----------------DEMKERGI 528
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+ S L+ G+ R +A V + ML P YN LI + + D A +
Sbjct: 529 KPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEE 588
Query: 283 M 283
+
Sbjct: 589 L 589
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 123/302 (40%), Gaps = 53/302 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ YC +G+F A + M K PD T N+ I L R EE
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPD--------CYTYNSFISRLCKERRIEE 305
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM-------L 116
A +L + E GL P+ V++ A++ G G+L KA+ + DEMM + L
Sbjct: 306 ASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYR---DEMMNRGIVASVFTYNL 362
Query: 117 AIQPL-------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
I L + M ++G D V Y IN YC G KA +L DE+
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE-K 421
Query: 170 DVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIE-NCSNNEF 226
++R +V Y LI K+ R EA++ + P + F+ LI+ +C N
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE---GMLPDIIMFNALIDGHCVNGNI 478
Query: 227 TSLVELVK-------------------GF-RIRDLENEAASVLNTMLHWNDKPDGAVYNF 266
+L+K G+ R R +E EA +L+ M KPD YN
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE-EAKKLLDEMKERGIKPDHISYNT 537
Query: 267 LI 268
LI
Sbjct: 538 LI 539
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 42/259 (16%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++VT N +I+G G+ E A +I + M + L PD ++ + +S R+ + R+
Sbjct: 250 PNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFIS---RLCKERR---- 302
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
I+ SG V L+ + G + + V Y +LI+ C G++ KA
Sbjct: 303 ---------------IEEASG-VLCKLL-ESGLVPNAVTYNALIDGCCNKGDLDKAFAYR 345
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV-----------------YHLC 205
DE+ + G V Y++LI L + R +EA+ M+ + Y C
Sbjct: 346 DEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC 405
Query: 206 TSSWPTLT-FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
++ L+ FD ++E + L+ F R+ +EA + PD ++
Sbjct: 406 GNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMF 465
Query: 265 NFLIVEHCRCDNGDKAYDM 283
N LI HC N D+A+ +
Sbjct: 466 NALIDGHCVNGNIDRAFQL 484
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 19/197 (9%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC G KA + D+M+ K P++ T +LI G R EA E +
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNI--------RPTVETYTSLIDVFGKRNRMSEAEEKFKKS 453
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
+ G+ PD + F A++ G G + +A+ L EMD + + L
Sbjct: 454 IKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV 513
Query: 122 -SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
M ++G D ++Y +LI+ Y G++ A + DE+ G + Y+ L
Sbjct: 514 EEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNAL 573
Query: 181 ISGLDKKARTQEAKKML 197
I G K A+++L
Sbjct: 574 IQGYSKIGEADHAEELL 590
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 43/263 (16%)
Query: 58 FGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA 117
F + +EALE L M E + P T + +++S ++ +++ A+ + EM +M ++++
Sbjct: 160 FRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVT 219
Query: 118 ----IQPLSGDVYWSL-------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
I L + W M G + V Y ++IN YC G+ A + +
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMK 279
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEF 226
Y+ IS L K+ R +EA +L L+ + +T++ LI+ C N
Sbjct: 280 DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN--AVTYNALIDGCCNKG- 336
Query: 227 TSLVELVKGFRIRD----------------------LEN---EAASVLNTMLHWNDKPDG 261
+L K F RD LE EA ++ M +PD
Sbjct: 337 ----DLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392
Query: 262 AVYNFLIVEHCRCDNGDKAYDMY 284
YN I +CRC N KA ++
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLF 415
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ Y +G+ A + D+M+ GF P+L+T NALI G G A+
Sbjct: 534 SYNTLISGYSKRGDMKDALEVFDEMLSLGF--------DPTLLTYNALIQGYSKIGEADH 585
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSG 89
A E+LR M G+ PD ++ V+
Sbjct: 586 AEELLREMQSKGITPDDSTYLYVIEA 611
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM YC + + +A + D+M +G PD ++ N LI G G ++ALE+
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISY--------NTLISGYSKRGDMKDALEV 554
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
M +G P +++ A++ G+ +IGE A +L EM
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREM 593
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 53/283 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC GE +AF +H+QM+ KG +P++VT AL GL G +
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGL--------TPNVVTYTALADGLCKNGEIDV 470
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A E+L M GL P+ ++ +V+G +IG + + L EMD LA
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD--------LA------ 516
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
G D + YT+L++AYC GE+ KA LL + + V ++VL++G
Sbjct: 517 ----------GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNG 566
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
++ ++++ + L P TF++L++ C N + E+ K R +
Sbjct: 567 FCMSGMLEDGERLI---EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGV 623
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD YN LI HC+ N +A+ ++
Sbjct: 624 ----------------MPDSNTYNILIKGHCKARNMKEAWFLH 650
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C GE K + D++ KG PD + L+ C G EA ++LRGM
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKN--------GEVVEAEQLLRGMR 339
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY------ 126
+ G+FPD V +T V+SGF ++G + A L DEM + + I + ++
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKL---FDEMRRKKIVPDIVTYTSVIHGICKSG 396
Query: 127 --------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
++ M +G DEV YT+LI+ YC GE+ +A ++ +++ G V Y
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYT 456
Query: 179 VLISGLDKKARTQEAKKML 197
L GL K A ++L
Sbjct: 457 ALADGLCKNGEIDVANELL 475
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 108/244 (44%), Gaps = 30/244 (12%)
Query: 46 VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--- 102
V+CN ++H L G+ EA +L M + G FPD VS+ VVSG+ RIGEL K L
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302
Query: 103 ----KLEMDEMMQSNNMLAI----QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L+ DE + +N +L + + + + M K G D V YT++I+ +C G
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
V A L DE+ V V Y +I G+ K + EA++M +
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM-------------- 408
Query: 215 DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
L++ +E T L+ G+ EA SV N M+ P+ Y L C
Sbjct: 409 --LVKGLEPDEVT-YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL--ADGLC 463
Query: 275 DNGD 278
NG+
Sbjct: 464 KNGE 467
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 40/299 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQ-MIHKGFLPDFVTEFSP--------SLVTCNALIHGLGF- 57
L+ Y D G F ++ Q ++ GF+ + F S+ +CN + L
Sbjct: 160 LIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCN 219
Query: 58 FGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE--------- 108
F + A+++ PE+G+ +TVS V+ ++G++R+A++L ++M +
Sbjct: 220 FEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVS 279
Query: 109 -MMQSNNMLAIQPLSG--DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ + I L + L GK G DE Y ++I C +GEVV+A+ LL +
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDELKGK-GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM 338
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE 225
+G +V+Y +ISG K A K+ FD + +
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKL-----------------FDEMRRKKIVPD 381
Query: 226 FTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ ++ G EA + N ML +PD Y LI +C+ +A+ ++
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC +G S+AF + D M KG P L T NALI+GL G E
Sbjct: 275 TYNTLVNAYCRRGLVSEAFGLVDCMAGKGL--------KPGLFTYNALINGLCKEGSYER 326
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFR---IGELRKAYDLKLE---MDEMMQSNNMLA 117
A +L M +GL P+ +F ++ R + E + ++ L+ + +++ ++++
Sbjct: 327 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 386
Query: 118 IQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ +G++ Y+ M G + D V YT LIN YC + +V A + +E+ G V
Sbjct: 387 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 446
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
V Y+ L++GL + +A ++ F ++E +F +L L
Sbjct: 447 DVVTYNTLLNGLCRGKMLDDADEL-----------------FKEMVERGVFPDFYTLTTL 489
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ G+ +A S+ TM + KPD YN L+ C+ +KA +++
Sbjct: 490 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 541
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y L+ YC G +KA + + M + PD +VT N L+ G G E
Sbjct: 484 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPD--------VVTYNTLMDGFCKVGEME 535
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNML 116
+A E+ M +FP +SF+ +++GF +G + +A+ L EM E ++ N ++
Sbjct: 536 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII 595
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+G++ + + M +G D + Y +LIN++ + +A L++ + G +
Sbjct: 596 KGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLL 655
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V Y+ ++ G + R QEA+ +V H +I+ N + ++
Sbjct: 656 PNLVTYNAILGGFSRHGRMQEAE-----MVLH------------KMIDKGINPDKSTYTS 698
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPD 260
L+ G+ +D EA V + ML PD
Sbjct: 699 LINGYVSKDNMKEAFRVHDEMLQRGFVPD 727
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 127/329 (38%), Gaps = 77/329 (23%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS---------------------- 42
Y L+ YC + S A M ++M+ +G + D VT +
Sbjct: 416 YTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMV 475
Query: 43 -----PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
P T LIHG G +AL + M L PD V++ ++ GF ++GE+
Sbjct: 476 ERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME 535
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
KA +L +M +S +++ S ++++ LIN +C+ G V +
Sbjct: 536 KAKELWYDM--------------ISREIFPSY----------ISFSILINGFCSLGLVSE 571
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFD 215
A L DE+ G V + +I G + +A L +++ + P +T++
Sbjct: 572 AFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMI----SEGVPPDCITYN 627
Query: 216 TLIENCSNNE--------------------FTSLVELVKGFRIRDLENEAASVLNTMLHW 255
TLI + E + ++ GF EA VL+ M+
Sbjct: 628 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 687
Query: 256 NDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD + Y LI + DN +A+ ++
Sbjct: 688 GINPDKSTYTSLINGYVSKDNMKEAFRVH 716
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 123/305 (40%), Gaps = 68/305 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------EFSPSL------ 45
++ +++G + GE +A ++M G +PD V + S +L
Sbjct: 380 SFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEM 439
Query: 46 ---------VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
VT N L++GL ++A E+ + M E G+FPD + T ++ G+ + G +
Sbjct: 440 VERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNM 499
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
KA L ++ + +++P D V Y +L++ +C GE+
Sbjct: 500 TKALSL-------FETMTLRSLKP-----------------DVVTYNTLMDGFCKVGEME 535
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDT 216
KAK L ++ + + +LI+G EA ++ W D
Sbjct: 536 KAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL------------W-----DE 578
Query: 217 LIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
+ E + ++KG+ ++A LNTM+ PD YN LI + +N
Sbjct: 579 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 638
Query: 277 GDKAY 281
D+A+
Sbjct: 639 FDRAF 643
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 86 VVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSL 145
V F + G + Y L + ++ + + + + VY S M ++G D V Y +L
Sbjct: 225 VYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNV-----GVYLSEMEEKGVYADLVTYNTL 279
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV-YHL 204
+NAYC G V +A L+D + G Y+ LI+GL K+ + AK++L ++ L
Sbjct: 280 VNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGL 339
Query: 205 CTSSWPTLTFDT-LIENCSNNEF----TSLVELVKGFRIRDLENEAASV--------LNT 251
C ++ TF+ L+E+C + E+++ + DL + ++ V L
Sbjct: 340 CPNAA---TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGR 396
Query: 252 MLHWNDK-------PDGAVYNFLIVEHCRCDNGDKAYDM 283
L + +K PD +Y LI +CR D+ A M
Sbjct: 397 ALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM 435
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 48/260 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G+ + M G PD +T + +I GL GR EEA E+++ M
Sbjct: 151 CKQGDVEMGEKLMKDMSLNGICPDLITYMT--------MIEGLCSAGRLEEAYEMVKVMR 202
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
G P++V +AV+ G R+ + +A +L +DEM + SGD ++
Sbjct: 203 GNGCSPNSVVLSAVLDGLCRLDSMERALEL---LDEMEK----------SGDCCPNV--- 246
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
V YTSLI ++C GE +A +LD + FG V LI L + R E
Sbjct: 247 -------VTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDE 299
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTM 252
A K++ LV C S +C N+ S + R++ LE A ++ M
Sbjct: 300 AYKVVDKLVVEHCVSRG----------DCYNSLVISFI------RVKKLEG-AENLFKEM 342
Query: 253 LHWNDKPDGAVYNFLIVEHC 272
L KPD + L+ E C
Sbjct: 343 LAAEIKPDTLASSLLLKELC 362
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 79/323 (24%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM C G+ ++A H HD ++ GF D VT LI+GL G+ +EAL++
Sbjct: 137 LMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTY--------GTLINGLCKMGKTKEALQV 188
Query: 68 LRG-----------------------------------MPEMGLFPDTVSFTAVVSGFFR 92
LR M + P V+F+A++ GF
Sbjct: 189 LRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCI 248
Query: 93 IGELRKAYDLKLEM------DEMMQSNNMLAIQPLSGDV-----YWSLMGKQGGLLDEVN 141
+G+L++A+ L +M ++ N ++ GDV + +M K+G + D V
Sbjct: 249 VGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVT 308
Query: 142 YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
Y S+++ +C EV KAK LL ++ G + Y ++I+G K EA LSL
Sbjct: 309 YNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEA----LSLF 364
Query: 202 YHL-CTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
Y + C P T+T+ +LI+ C + F+ ELV +H N +
Sbjct: 365 YEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDE-----------------MHVNGQ 407
Query: 259 PDGA-VYNFLIVEHCRCDNGDKA 280
P Y+ LI C+ ++ DKA
Sbjct: 408 PPNIFTYSSLIDALCKNNHLDKA 430
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 32/194 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ C G FS A+ + D+M H P P++ T ++LI L ++
Sbjct: 378 TYSSLIDGLCKSGRFSCAWELVDEM-HVNGQP-------PNIFTYSSLIDALCKNNHLDK 429
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +++ + + G+ PD ++ ++ G + G L+ A
Sbjct: 430 AMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNA-----------------------Q 466
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
DV+ L+ K G L+ +Y LIN C DG KA+ LL ++ + +V Y+ +I
Sbjct: 467 DVFQDLLTK-GYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHS 525
Query: 184 LDKKARTQEAKKML 197
L K ++A+K+L
Sbjct: 526 LFYKDENEKAEKLL 539
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 43/236 (18%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++V+ + LI+ G+ A IL + +MG P+T++F ++ G G++ +A
Sbjct: 94 PNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHF 153
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+++LA+ G LD+V Y +LIN C G+ +A +L
Sbjct: 154 H---------DHVLAL---------------GFHLDQVTYGTLINGLCKMGKTKEALQVL 189
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
+ V+Y+ +I L K +A ++ ++ S +TF LI
Sbjct: 190 RRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITK--KISPTVVTFSALIY--- 244
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
GF I EA +++ M+ N PD VY F I+ C GD
Sbjct: 245 ------------GFCIVGQLKEAFGLVHQMVLKNINPD--VYTFNILVDALCKEGD 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 44/284 (15%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C G+ +AF + QM+ K PD + T N L+ L G + A L M
Sbjct: 246 FCIVGQLKEAFGLVHQMVLKNINPD--------VYTFNILVDALCKEGDVKGAKSFLVVM 297
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM----------MQSNNMLAIQPL 121
+ G+ PD V++ +++ G + E+ KA L + + + N I+ +
Sbjct: 298 MKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMI 357
Query: 122 SGDVYWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
D SL M +G + V Y+SLI+ C G A L+DE+ G Y
Sbjct: 358 --DEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYS 415
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTSS-WPTL-TFDTLIENCSNNEFTSLVELVKGF 236
LI L K +A ++LV + P + T++ LI+ L KG
Sbjct: 416 SLIDALCKNNHLDKA----MTLVKKIKDQGIQPDMYTYNILIDG-----------LCKGG 460
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
R+++ ++ +L N + YN LI C+ DKA
Sbjct: 461 RLKNAQDVFQDLLTKGYSLNIRS----YNILINGLCKDGLFDKA 500
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 38 VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
V P +V+ N LI G R ++ALE++ MP G PD VS+ V++ + R
Sbjct: 295 VAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKD---R 351
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG---------------KQGGLLDEVNY 142
K ++K M+ M+Q++N++ Q + ++L ++G +D+V Y
Sbjct: 352 KVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGY 411
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVY 202
+++++++C + + KAK+L+ ++ G V Y +I G + + EAKKML +
Sbjct: 412 SAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYK 471
Query: 203 HLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVK-------------------GFRIRDLE 242
H C + T+T+ L+ C N + E++ G R
Sbjct: 472 HGCKPN--TVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN--GDKAY 281
+EA + M+ P+ N LI CR N G K Y
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C G+ +A M QM G P+ VT L++GL G++ E
Sbjct: 445 TYTAIIDGFCRVGKIDEAKKMLQQMYKHGC--------KPNTVTYTVLLNGLCHNGKSLE 496
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM----LAIQ 119
A E++ E P+ ++++AV+ G R G+L +A DL EM E N L IQ
Sbjct: 497 AREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQ 556
Query: 120 PL-------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L Y +G ++ VN+TS+I +C G++ A ++L+++
Sbjct: 557 SLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHP 616
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLV 201
++ Y L L KK+R EA ++++ ++
Sbjct: 617 DAITYTTLFDALGKKSRLDEASELIVKML 645
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 119/295 (40%), Gaps = 37/295 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y LMG Y G+ +A ++ +M + +P ++ T LI GLG GR
Sbjct: 266 AKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVP--------TVYTYTELIRGLGKSGRV 317
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ-- 119
E+A + + M + G PD V +++ R L++A +L EM + + N++
Sbjct: 318 EDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTI 377
Query: 120 ----------PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
P + M K G + Y+ LI+ +C V KA LL+E+ G
Sbjct: 378 IKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG 437
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
Y LI+ L K R + A ++ F L ENC ++
Sbjct: 438 FPPCPAAYCSLINSLGKAKRYEAANEL-----------------FQELKENCGSSSVRVY 480
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
++K F NEA + N M PD YN LI R D D+A+ ++
Sbjct: 481 AVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLF 535
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 44/258 (17%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMG-LFPDTVSFTAVVSGFFRIGELRKAYD 101
P+ T N++I L G E+ E+ M G FPDTV+++A++S F ++ A
Sbjct: 193 PTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVR 252
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMG---KQGGLLDEVN----------------Y 142
L DEM ++ +QP + +Y +LMG K G + + +N Y
Sbjct: 253 L---FDEMKEN----GLQP-TAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTY 304
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVY 202
T LI G V A + + G V+ + LI+ L + R +EA ++ +
Sbjct: 305 TELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRL 364
Query: 203 HLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
CT + +T++T+I++ F + +EA+S L M P
Sbjct: 365 LNCTPN--VVTYNTIIKSL--------------FEDKAPPSEASSWLERMKKDGVVPSSF 408
Query: 263 VYNFLIVEHCRCDNGDKA 280
Y+ LI C+ + +KA
Sbjct: 409 TYSILIDGFCKTNRVEKA 426
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 53/278 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ + + K PD + T NALI G G+ ++A
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPD--------VFTYNALISGFCIVGKLKDA 387
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+++ M + PD +F+ +V GF + G +++A N+LA
Sbjct: 388 IDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEA-------------KNVLA------- 427
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQ D V Y+SL++ YC EV KA+++ + ++H G Y+++I+G
Sbjct: 428 ----MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K EA K L ++H +P +T+ +LI+ C + + +ELV
Sbjct: 484 CKIKMVDEAMK-LFKEMHH--KQIFPDVITYSSLIDGLCKSGRISYALELV--------- 531
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M + +PD YN ++ C+ + DKA
Sbjct: 532 -------DEMHYRGQQPDIITYNSILDALCKKHHVDKA 562
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 130/312 (41%), Gaps = 45/312 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ +C G+ A + ++M K +PD + T + L+ G G
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPD--------VYTFSILVDGFCKDGNI 419
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNML 116
+EA +L M + + PD V++++++ G+ + E+ KA + M +QS N++
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479
Query: 117 AIQPLSGDVYWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELT 166
++G ++ + L E + Y+SLI+ C G + A L+DE+
Sbjct: 480 ----INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMH 535
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLS---------------LVYHLCTSSW-- 209
+ G + Y+ ++ L KK +A +L LV LC S
Sbjct: 536 YRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLE 595
Query: 210 -PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
F+ L+ N + + +++GF + L +EA ++L+ M PD Y +I
Sbjct: 596 DARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655
Query: 269 VEHCRCDNGDKA 280
+ D D A
Sbjct: 656 LSLFEKDENDMA 667
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 30/256 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P +T I G G+ +AL + MG D VS+ +++G ++GE + A
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318
Query: 101 DLKLEMD-EMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNYTSLINA 148
+L D +++Q + ++ + G D+Y + K+ D Y +LI+
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR-IFPDVFTYNALISG 377
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
+C G++ A L +++T + + +L+ G K +EAK +L
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA---------- 427
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+++ + + L+ G+ + + N+A S+ NTM H + YN +I
Sbjct: 428 -------MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480
Query: 269 VEHCRCDNGDKAYDMY 284
C+ D+A ++
Sbjct: 481 NGFCKIKMVDEAMKLF 496
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ C G S A + D+M ++G PD ++T N+++ L ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPD--------IITYNSILDALCKKHHVDK 561
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L + G+ PD ++T +V G + G+L A
Sbjct: 562 AITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA-----------------------R 598
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V+ L+ K G LD YT +I +C G +A LL ++ G + + Y+++I
Sbjct: 599 KVFEDLLVK-GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 657
Query: 184 LDKKARTQEAKKMLLSLV 201
L +K A+K+L ++
Sbjct: 658 LFEKDENDMAEKLLREMI 675
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE----------------------- 40
+ L+ C KG+ +A H HD++I GF D V+
Sbjct: 140 TFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETIAALELLRRF 199
Query: 41 ----FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P +V N +I G+ +A ++ M + P+ V+++A++SGF +G+L
Sbjct: 200 DGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKL 259
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+ A+D +M ++ + ++M KQG D V Y+SL++ YC EV
Sbjct: 260 KDAFDFFNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 319
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFD 215
KA+++ + ++H G + Y ++I+G K EA K L ++H +P +T+
Sbjct: 320 KAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMK-LFKEMHH--KQIFPDVITYS 376
Query: 216 TLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
LI+ C + + ++LV R + P+ YN ++ C+
Sbjct: 377 ALIDGLCKSGRISYALQLVDQMHDRGVA----------------PNIVTYNSILDALCKT 420
Query: 275 DNGDKA 280
DKA
Sbjct: 421 HQVDKA 426
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 117/282 (41%), Gaps = 59/282 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNA-----LIHGLGFF 58
Y +LM YC E +KA + + M H+G VT NA +I+G
Sbjct: 304 TYSSLMDGYCLVNEVNKAESIFNTMSHRG-------------VTANAKSYSIMINGFCKI 350
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
+EA+++ + M +FPD ++++A++ G + G R +Y L+L +D+M
Sbjct: 351 KMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSG--RISYALQL-VDQMHD------- 400
Query: 119 QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
+G + V Y S+++A C +V KA LL + G Y
Sbjct: 401 --------------RGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYT 446
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRI 238
+LI GL K R ++A+ + F+ L+ N + +++GF
Sbjct: 447 ILIDGLCKGGRLKDARNI-----------------FEDLLVKGYNITVNTYTVMIQGFCS 489
Query: 239 RDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L +E+ ++L+ M PD Y +I D DKA
Sbjct: 490 HGLLDESLALLSKMEENGCIPDAVTYEIIICSLFDKDKNDKA 531
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 110/284 (38%), Gaps = 39/284 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G AF + +++ G+ PD +T LI GL G +AL
Sbjct: 109 LINSFCQLGHIPFAFSVLAKILKNGYEPD--------TITFTTLIKGLCLKGDIHQALHF 160
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ MG D VS+ +++G ++GE A +L D +QP
Sbjct: 161 HDKVIAMGFHLDQVSYGTLINGLCKVGETIAALELLRRFDGKF-------VQP------- 206
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
D V Y ++I+ C D V A L E+ V Y LISG
Sbjct: 207 ----------DVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIV 256
Query: 188 ARTQEA----KKMLLSLVYHLCTSSWPTLTFDTL---IENCSNNEFTSLVELVKGFRIRD 240
+ ++A KM+ LV C + L ++ + + L+ G+ + +
Sbjct: 257 GKLKDAFDFFNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVN 316
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N+A S+ NTM H + Y+ +I C+ D+A ++
Sbjct: 317 EVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLF 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 35/219 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A +Y ++ +C +A + +M HK PD ++T +ALI GL GR
Sbjct: 337 AKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPD--------VITYSALIDGLCKSGRI 388
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
AL+++ M + G+ P+ V++ +++ + ++ KA L + + IQP
Sbjct: 389 SYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQ-------GIQP- 440
Query: 122 SGDVYWSLMG---KQGGLLDEVN----------------YTSLINAYCADGEVVKAKTLL 162
S Y L+ K G L D N YT +I +C+ G + ++ LL
Sbjct: 441 SVYTYTILIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALL 500
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
++ G + +V Y+++I L K + +A+K+L ++
Sbjct: 501 SKMEENGCIPDAVTYEIIICSLFDKDKNDKAEKLLREMI 539
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ YC G+ +A + D+M G D + TC+ L+ GL GR E
Sbjct: 264 YVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGD--------VFTCSILVKGLCDSGRFE 315
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EA ++ M + G+F + V++ AV+ G+ ++G++ KA ++ +M E N++ L
Sbjct: 316 EAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLI 375
Query: 122 -----SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G++ ++ M +G + D V YT+LI+ +C A L E+ G
Sbjct: 376 DGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLT 435
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLL 198
V LI GL K+ +T A K+ L
Sbjct: 436 PNVVTVTSLIDGLLKEGKTYGAIKLFL 462
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C++G+FS A + D+MI +G +P+ V + V CN G +E
Sbjct: 125 TYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNE--------GDMDE 176
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNMLA 117
A L+ M E G+ P+ ++ ++ G+ + G +++ +++ +M +++ ++
Sbjct: 177 AERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVD 236
Query: 118 IQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH---FG 169
+ GD+ + M K G + Y LI+ YC G++V+A L DE+ FG
Sbjct: 237 VLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFG 296
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLL----------SLVYHLCTSSWPTL-TFDTLI 218
DV +L+ GL R +EAK ++ ++ Y+ + + + I
Sbjct: 297 DV---FTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAI 353
Query: 219 ENCSN-------NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
E CS + L+ GF + A + M+ PD Y LI H
Sbjct: 354 EVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGH 413
Query: 272 CRCDNGDKAYDMY 284
C+ +N A++++
Sbjct: 414 CKVENSKVAFELH 426
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ YC G+ KA + QM + + P+++T + LI G G
Sbjct: 333 AVTYNAVIDGYCKMGDMEKAIEVCSQMTER--------KIEPNVITFSTLIDGFCKKGNM 384
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ A+ + M GL PD V++TA++ G ++ + A++L EM E + N++ + L
Sbjct: 385 KAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSL 444
Query: 122 ------SGDVYWSL--------MGKQGGLLD--------EVNYTSLINAYCADGEVVKAK 159
G Y ++ +G GG D EV Y +LI C DG + KA
Sbjct: 445 IDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSGVCSPNEVMYAALIQGLCKDGRIFKAT 504
Query: 160 TLLDELTHFGDVRQSVIYDVLISG 183
++ G V+Y +++
Sbjct: 505 KFFKDMRCSGFKPDMVLYVIMLEA 528
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 28/240 (11%)
Query: 15 KGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEM 74
K +K + Q +H P + PSL CNAL+H L + + + +
Sbjct: 62 KNNITKTTSLKKQHLHISNKPTTL----PSLRECNALLHSLVKSKKFDSVWSVYNNLLSR 117
Query: 75 GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN---NMLAIQPL------SGDV 125
GL P +++ +++ G+ A + DEM+Q N++ L GD+
Sbjct: 118 GLLPTLITYGILLNCCCNQGDFSNARKV---FDEMIQRGIVPNVVVYTTLIRVFCNEGDM 174
Query: 126 -----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
+ LM + G + Y +LI+ YC G V + + ++ G V + +L
Sbjct: 175 DEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAIL 234
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
+ L K + A+ VY +P L + NC + + +LV+ R+RD
Sbjct: 235 VDVLCKVGDLEAARN---CFVYMDKFGVFPNL----YVYNCLIDGYCKAGDLVEAMRLRD 287
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 53/281 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y +++ C + AF ++ +M K SP++VT +ALI G G+
Sbjct: 154 AVMYSSIIDSMCKDKHVNDAFDLYSEMAAK--------RISPNVVTYSALISGFCIVGKL 205
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++A+++ M + P+ +F+ +V GF + G +++A N+LA
Sbjct: 206 KDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEA-------------KNVLA---- 248
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+M KQG D V Y+SL++ YC EV KA+++ + ++H G Y ++I
Sbjct: 249 -------MMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMI 301
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIR 239
+G K EA K L ++H +P +T+ LI+ C + + +ELV
Sbjct: 302 NGFCKIKMVDEAMK-LFKEMHH--KQIFPDVITYSALIDGLCKSGRISYALELV------ 352
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M +PD YN ++ C+ + DKA
Sbjct: 353 ----------DEMHDRGQQPDIITYNSILDALCKKHHVDKA 383
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA + + M H+G + ++ + + +I+G +E
Sbjct: 261 TYSSLMDGYCLVNEVNKAESIFNTMSHRGV--------TANVQSYSIMINGFCKIKMVDE 312
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+++ + M +FPD ++++A++ G + G + A +L EM + Q QP
Sbjct: 313 AMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQ-------QP--- 362
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D + Y S+++A C V KA LL +L G Y +L+ G
Sbjct: 363 --------------DIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKG 408
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L + + ++A+K+ F+ L+ N + + +++GF + L +
Sbjct: 409 LCRSGKLEDARKV-----------------FEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 451
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L+ M PD Y +I+ D D A
Sbjct: 452 EALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMA 488
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 28/251 (11%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD--- 101
LV C+ LI+ G A +L + + G PDT++FT ++ G G++ +A
Sbjct: 49 LVNCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHD 108
Query: 102 ----LKLEMDEMMQSN--NMLAIQPLSGDVYWSLMGKQGGL--LDEVNYTSLINAYCADG 153
+ +D++ N L + L G L LD V Y+S+I++ C D
Sbjct: 109 KVIAMGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDK 168
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT 213
V A L E+ V Y LISG + ++A + ++
Sbjct: 169 HVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI------------ 216
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+EN + N +T + LV GF EA +VL M+ KPD Y+ L+ +C
Sbjct: 217 ----LENINPNVYTFSI-LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCL 271
Query: 274 CDNGDKAYDMY 284
+ +KA ++
Sbjct: 272 VNEVNKAESIF 282
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G S A + D+M +G PD ++T N+++ L ++
Sbjct: 331 TYSALIDGLCKSGRISYALELVDEMHDRGQQPD--------IITYNSILDALCKKHHVDK 382
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L + G+ PD ++T +V G R G+L A K+ D +++ N+
Sbjct: 383 AIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDAR--KVFEDLLVKGYNL-------- 432
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
DVY YT +I +C G +A LL ++ G + + Y+++I
Sbjct: 433 DVYA--------------YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 478
Query: 184 LDKKARTQEAKKMLLSLV 201
L +K A+K+L ++
Sbjct: 479 LFEKDENDMAEKLLREMI 496
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 53/281 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y +++ C + AF ++ +M K SP++VT +ALI G G+
Sbjct: 42 AVMYSSIIDSMCKDKHVNDAFDLYSEMAAK--------RISPNVVTYSALISGFCIVGKL 93
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++A+++ M + P+ +F+ +V GF + G +++A N+LA
Sbjct: 94 KDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEA-------------KNVLA---- 136
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+M KQG D V Y+SL++ YC EV KA+++ + ++H G Y ++I
Sbjct: 137 -------MMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMI 189
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIR 239
+G K EA K L ++H +P +T+ LI+ C + + +ELV
Sbjct: 190 NGFCKIKMVDEAMK-LFKEMHH--KQIFPDVITYSALIDGLCKSGRISYALELV------ 240
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M +PD YN ++ C+ + DKA
Sbjct: 241 ----------DEMHDRGQQPDIITYNSILDALCKKHHVDKA 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 49/276 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y +LM YC E +KA + + M H+G + ++ + + +I+G +EA
Sbjct: 150 YSSLMDGYCLVNEVNKAESIFNTMSHRGV--------TANVQSYSIMINGFCKIKMVDEA 201
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+++ + M +FPD ++++A++ G + G + A +L EM + Q QP
Sbjct: 202 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQ-------QP---- 250
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
D + Y S+++A C V KA LL +L G Y +L+ GL
Sbjct: 251 -------------DIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGL 297
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
+ + ++A+K+ F+ L+ N + + +++GF + L +E
Sbjct: 298 CRSGKLEDARKV-----------------FEDLLVKGYNLDVYAYTVMIQGFCDKGLFDE 340
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
A ++L+ M PD Y +I+ D D A
Sbjct: 341 ALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMA 376
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C G S A + D+M +G PD ++T N+++ L ++A
Sbjct: 220 YSALIDGLCKSGRISYALELVDEMHDRGQQPD--------IITYNSILDALCKKHHVDKA 271
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ +L + G+ PD ++T +V G R G+L A K+ D +++ N+ D
Sbjct: 272 IALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDAR--KVFEDLLVKGYNL--------D 321
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
VY YT +I +C G +A LL ++ G + + Y+++I L
Sbjct: 322 VYA--------------YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 367
Query: 185 DKKARTQEAKKMLLSLV 201
+K A+K+L ++
Sbjct: 368 FEKDENDMAEKLLREMI 384
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C G+ + + D M+ +G P+FVT N+L+ G
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY--------NSLMDGYCLVKEV 346
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A I M + G+ PD S++ +++GF +I + +A +L EM +++ L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 122 ------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
SG + ++L M +G Y S+++A C +V KA LL +L G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y +LI GL + + ++A+K+ F+ L+ N +
Sbjct: 467 QPNMYTYSILIKGLCQSGKLEDARKV-----------------FEGLLVKGHNLNVDTYT 509
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+++GF + L NEA ++L+ M PD Y +I+ + D D A
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 56/289 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ + ++G + ++ +M +G P+LV CN LI+ G
Sbjct: 85 AFEFNKILGSLVKSKHYHTVLYLSQKMEFRGI--------KPNLVNCNILINCFCQLGLI 136
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A + + +MG PDT++FT ++ G G++++A+ + + ++A+
Sbjct: 137 PFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAF---------LFHDKVVAL--- 184
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS--VIYDV 179
G D+++Y +LI+ C GE A LL + G++ Q V+Y+
Sbjct: 185 ------------GFHFDQISYGTLIHGLCKVGETRAALDLLQRVD--GNLVQPNVVMYNT 230
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+I + K EA + F +I + + + L+ GF I
Sbjct: 231 IIDSMCKVKLVNEAFDL-----------------FSEMISKGISPDVVTYSALISGFCIL 273
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC---RCDNGDKAYDMYM 285
N+A + N M+ N KPD +N L+ C + G +DM M
Sbjct: 274 GKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ +C +F +A ++ +M K +PD +VT ++LI GL GR
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD--------VVTYSSLIDGLSKSGRISY 418
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
AL+++ M + G+ P ++ +++ +I ++ KA L ++ + NM L
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIK 478
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ V+ L+ K G L+ YT +I +C +G +A LL ++ G +
Sbjct: 479 GLCQSGKLEDARKVFEGLLVK-GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ Y+++I L KK A+K+L ++
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMI 567
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 55/276 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C S A+ ++ +MI K SP +VT N+LI G G+ +EA +
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITK--------RISPDVVTFNSLILGFCVVGQLKEAFGL 256
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
M + PD +F+ +V + G + +A NMLA+
Sbjct: 257 FHEMVLKNINPDVYTFSILVDALCKDGNITRA-------------KNMLAV--------- 294
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
M KQG + D V Y+SL++ YC EV KAK + ++ G + Y+++I+GL K
Sbjct: 295 --MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKI 352
Query: 188 ARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEA 245
EA LSL +C T+T+++LI+ L K RI
Sbjct: 353 KMVDEA----LSLFKEMCCKGIAPDTVTYNSLIDG-----------LCKLGRI-----SY 392
Query: 246 ASVLNTMLHWNDKP-DGAVYNFLIVEHCRCDNGDKA 280
A L +H N P D YN LI C+ + DKA
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ M G +P + N +I+GLG +E
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRLGV--------APHAHSYNIMINGLGKIKMVDE 357
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + + M G+ PDTV++ +++ G ++G + A+ L +DEM +N + A
Sbjct: 358 ALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL---VDEM-HNNGIPA------ 407
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D + Y SLI+ C + + KA L+ ++ G Y++LI G
Sbjct: 408 --------------DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K R + A+ + D LI+ S N +T + ++ G L N
Sbjct: 454 LCKGGRLKNAQDVFQ----------------DLLIKGYSVNAWTYNI-MINGLCKEGLFN 496
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA +L+ M + PD Y +I R D +KA
Sbjct: 497 EAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKA 533
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC GE + AF + +++ G+ P+ +T N LI+G+ G+ +EAL
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGY--------HPTTITFNTLINGICLNGKLKEALHF 151
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL------KLEMDEMMQSN---NMLAI 118
+ +G D VS+ +++G +IGE R A + KL +++ N N L
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK 211
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
D Y +S M + D V + SLI +C G++ +A L E+
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+ +L+ L K AK ML ++ +T+ +L++ G+
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPD--VVTYSSLMD---------------GY 314
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ + N+A V +TM P YN +I
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 113/270 (41%), Gaps = 49/270 (18%)
Query: 14 DKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPE 73
+ ++ A + Q+ KG +P++VT N L++ G A I + +
Sbjct: 71 NNNHYTTAISLSHQLELKGI--------TPTIVTFNILVNCYCHLGEMTFAFSIFAKILK 122
Query: 74 MGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQ 133
+G P T++F +++G G+L++A ++++A+
Sbjct: 123 LGYHPTTITFNTLINGICLNGKLKEALHF---------HDHVIAL--------------- 158
Query: 134 GGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
G LD+V+Y +LIN C GE A +L ++ V+Y+++I+ L K +A
Sbjct: 159 GFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 194 KKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTML 253
++ ++ S +TF++LI GF + EA + + M+
Sbjct: 219 YQLYSEMITK--RISPDVVTFNSLI---------------LGFCVVGQLKEAFGLFHEMV 261
Query: 254 HWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
N PD ++ L+ C+ N +A +M
Sbjct: 262 LKNINPDVYTFSILVDALCKDGNITRAKNM 291
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y L+ +C G +A D+M+HKG +P++VT ALIH +
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGC--------TPNVVTYTALIHAYLKAKQM 546
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A E+ M G P+ V++TA++ G + G++ KA + M ++S++M
Sbjct: 547 PVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDM------ 600
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D Y+ L + + Y +L++ C V +A LLD + G ++YD +I
Sbjct: 601 --DKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVI 658
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRD 240
G K + Q+A+++ + P L T+ + I+ + LV
Sbjct: 659 DGFCKIGKLQDAQEVFTKMSER---GYSPNLYTYSSFIDCLFKDNRLDLV---------- 705
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
VL+ ML + P+ +Y ++ C+ D+AY + +
Sbjct: 706 -----LKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQM--------IHKGFLPDFVTEFSPSLVTCNALIHGL 55
Y L+ +C G+ KA ++ +M + K F D P+++T AL+ GL
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 56 GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM 115
R +EA E+L M G P+ + + AV+ GF +IG+L+ A ++ +M E S N+
Sbjct: 627 CKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNL 686
Query: 116 LA----IQPLSGDVYWSLMGKQGGLLDE-------VNYTSLINAYCADGEVVKAKTLLDE 164
I L D L+ K + E V YT +++ C G+ +A L+ +
Sbjct: 687 YTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLK 746
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+ G V Y +I G K + ++ ++ + C ++ +T+ LI +C +N
Sbjct: 747 MEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNF--ITYRVLINHCCSN 804
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 118/274 (43%), Gaps = 56/274 (20%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G+ +A+ + +M KG +P++VT A+I G G G+ E+
Sbjct: 724 YTEMVDGLCKIGKTDEAYKLMLKMEEKGC--------NPNVVTYTAMIDGFGKSGKIEQC 775
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----IQP 120
LE+ R M G P+ +++ +++ G L +AY L EM + ++L+ I+
Sbjct: 776 LELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEG 835
Query: 121 LSGDVYWSLMGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGD 170
S + S+ GLLDE++ Y LI+ Y G + A LL+E++
Sbjct: 836 FSQEFITSI-----GLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPS 890
Query: 171 --VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN---E 225
V +Y LI L ++ +A ++ S++ S N E
Sbjct: 891 HAVSNKYLYASLIENLSHASKVDKALELYASMI--------------------SKNVVPE 930
Query: 226 FTSLVELVKGFRIRDLENEAASVLNTM----LHW 255
+ LV L+KG D EA + +++ +HW
Sbjct: 931 LSILVHLIKGLIKVDKWQEALQLSDSICQMDIHW 964
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 119/313 (38%), Gaps = 64/313 (20%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT-----------EFSPS----------- 44
+L+ YC ++S A+ + +MI G P ++ E PS
Sbjct: 354 SLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAY 413
Query: 45 -----------LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
V + L G+ ++A +I+ M G PD +++ V+
Sbjct: 414 SEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDA 473
Query: 94 GELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEV-NYTSLINAYCAD 152
++ KA+ L EM K+ G++ V YT LI+++C
Sbjct: 474 SKVEKAFSLFEEM-------------------------KRNGIVPSVYTYTILIDSFCKA 508
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
G + +A+ DE+ H G V Y LI K + A ++ ++ C + +
Sbjct: 509 GLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPN--VV 566
Query: 213 TFDTLIE-NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWN-DKPDGAVYNFLIVE 270
T+ LI+ +C + ++ R D+E+ + H N + P+ Y L+
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMR-GDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625
Query: 271 HCRCDNGDKAYDM 283
C+ + +A+++
Sbjct: 626 LCKANRVKEAHEL 638
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 51/266 (19%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ YCD + A +++++ G SP++VT N LI G G
Sbjct: 340 FTYNTLIKGYCDAEKIDTAVRLYNELKSNGL--------SPTVVTYNTLIAGYSKVGNLA 391
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
AL +++ M E + P V++T +++GF RI + KA+++
Sbjct: 392 GALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEI-------------------- 431
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
SLM K G + D Y LI+ C +G + +A L L SVIYD LI
Sbjct: 432 ----HSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIH 487
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G K+ A ++L ++ ++ N ++ F S + G +D +
Sbjct: 488 GYCKEGNCYRALRLLNEMI------------GKGMVPNVAS--FCSTI----GLLCKDEK 529
Query: 243 -NEAASVLNTMLHWNDKPDGAVYNFL 267
EA VL M++ KP ++YN +
Sbjct: 530 LKEAEVVLQHMVNLGLKPSVSLYNMV 555
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 67/288 (23%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y +++G YC+ G KAF++ D+M K + + S++T N LI+GL +
Sbjct: 269 VYTYSSVIGEYCNDGSIDKAFNVFDEMREK--------DIACSIMTYNLLINGLCRMKKL 320
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA+++ + +GL P+ ++ ++ G+ ++ A L E+ +SN L
Sbjct: 321 GEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNEL----KSNG------L 370
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
S V V Y +LI Y G + A L+ E+ V Y +L+
Sbjct: 371 SPTV--------------VTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILL 416
Query: 182 SGLDKKARTQEA--------KKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVEL 232
+G + ++A K L+S VY T+ LI C N
Sbjct: 417 NGFVRINYMEKAFEIHSLMEKSGLVSDVY----------TYGVLIHGLCMNGSM------ 460
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA+ + ++ N +P+ +Y+ LI +C+ N +A
Sbjct: 461 ----------KEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRA 498
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 126/305 (41%), Gaps = 58/305 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y++ ++ C+ G+ K+F + M G SP++V LI G G
Sbjct: 164 VYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGL--------SPNVVIYTTLIDGCCKNGDV 215
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A ++ M + L + +++ +++GFF+ G ++ + +M +S + I P
Sbjct: 216 HLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGF-------QMYESMKLSGIVP- 267
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVL 180
+VY Y+S+I YC DG + KA + DE+ D+ S++ Y++L
Sbjct: 268 --NVY--------------TYSSVIGEYCNDGSIDKAFNVFDEMRE-KDIACSIMTYNLL 310
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIEN-CSNNEFTSLVELVKGFRI 238
I+GL + + EA K+ + P + T++TLI+ C + + V L +
Sbjct: 311 INGLCRMKKLGEAVKLFYRVNR---VGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKS 367
Query: 239 RDLENE-------------------AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
L A +++ M N P Y L+ R + +K
Sbjct: 368 NGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEK 427
Query: 280 AYDMY 284
A++++
Sbjct: 428 AFEIH 432
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 70/308 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
+ L+ C +GE KA H+ MI + PD VT S
Sbjct: 266 TFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTL 325
Query: 43 ------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++ + N +I+GL EA + + M + PDTVS+ +++ G + G +
Sbjct: 326 PLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRI 385
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+DL +EM ++ Q N+ + Y SL++A C + +V
Sbjct: 386 SDVWDLLVEMHDIGQPANV------------------------ITYNSLLDALCKNHQVD 421
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFD 215
KA LL ++ G Y +L+ GL K R ++A++ +YH L T +P +
Sbjct: 422 KAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQE-----IYHDLLTKGYP---LN 473
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
+ N NEF L +EA S+L+ M P+ Y LI +
Sbjct: 474 VSMYNVMVNEFCK----------EGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENN 523
Query: 276 NGDKAYDM 283
DKA +
Sbjct: 524 KNDKAVKL 531
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 51/277 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C S + ++ +MI V + P+++T N LI+G G+ +EA
Sbjct: 197 YNTIIDALCKDKLVSDGYDLYSEMI--------VNKIHPNVITYNTLIYGFSILGQMKEA 248
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ +L M + PD ++FT +V G + GE++KA +
Sbjct: 249 VGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHV---------------------- 286
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M KQ D V Y+SL++ Y EV KAK L + L G Y+++I+GL
Sbjct: 287 --LAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGL 344
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K EA + + H + T+++++LI+ L K RI D+ +
Sbjct: 345 CKNKMVNEAANLFKEM--HSSNMTPDTVSYNSLIDG-----------LCKSGRISDVWD- 390
Query: 245 AASVLNTMLHWNDKPDGAV-YNFLIVEHCRCDNGDKA 280
L +H +P + YN L+ C+ DKA
Sbjct: 391 ----LLVEMHDIGQPANVITYNSLLDALCKNHQVDKA 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+ KA + HD +I KGF + V+ LI+GL G + AL++
Sbjct: 130 LINGLCLNGQIRKALYFHDHVIAKGFHLNHVSY--------GILINGLCKSGETKAALQL 181
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY- 126
L + + + PD V + ++ + + YDL EM N++ L +Y
Sbjct: 182 LEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTL---IYG 238
Query: 127 WSLMGKQG---GLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+S++G+ GLL++++ +T+L++ C GEV KA+ +L +
Sbjct: 239 FSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPD 298
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTL-IENCSNNEFTSLVEL 232
V Y L+ G +AK + F+TL + + N F+ + +
Sbjct: 299 IVTYSSLMDGYFLVKEVNKAKHL-----------------FNTLPLRGVTPNVFSYNI-M 340
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ G + NEAA++ M N PD YN LI C+ +D+
Sbjct: 341 INGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDL 391
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 58/293 (19%)
Query: 22 FHMHDQMIHKGFLPDFVTEFSPSLVTCNALIH------GLGFFGRA----------EEAL 65
F + + +H LP F+ ++ + N ++H + FG+ A+
Sbjct: 15 FFLPVRRLHIQPLPLFIPNVDDAVSSFNRILHMNNPTPPIFEFGKILGSLVKMNHFSTAI 74
Query: 66 EILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV 125
M G+ P+ V+ + +++ F + +L A+ + + ++++ L QP
Sbjct: 75 SFSHQMELKGIQPNIVTLSILINSFCHLNQLNYAFSI---LGKILK----LGYQP----- 122
Query: 126 YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLD 185
+ V T+LIN C +G++ KA D + G V Y +LI+GL
Sbjct: 123 ------------NTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLC 170
Query: 186 KKARTQEAKKMLL---------------SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
K T+ A ++L +++ LC + +D E N +++
Sbjct: 171 KSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVI 230
Query: 231 ---ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L+ GF I EA +LN M N PD + L+ C+ KA
Sbjct: 231 TYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKA 283
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 31/240 (12%)
Query: 10 GPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILR 69
G Y DK + AF ++ +M+ K SP +VT +ALI G G+ ++A+++
Sbjct: 232 GMYKDK-HVNDAFDLYSEMVAK--------RISPDVVTYSALIRGFFIVGKLKDAIDLFN 282
Query: 70 GMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN---NMLAIQPL----- 121
M + PD +F +V GF + G L+KA ++ +D MM + N+ L
Sbjct: 283 KMILENIKPDVYTFNILVDGFCKEGRLKKAKNV---LDMMMIQDIKPNVSTFNTLVDGFC 339
Query: 122 ------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
G +++M KQG + V Y SL++ YC +V KAK + + ++ G
Sbjct: 340 KDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVH 399
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVY-HLCTSSWPTLTFDTLIEN-CSNNEFTSLVELV 233
Y+++I+G K + +A K+ + + + H+ +T+++LI+ C + + + +LV
Sbjct: 400 SYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPD---VVTYNSLIDGLCKSGKISYAFQLV 456
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 137/312 (43%), Gaps = 47/312 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G AF + +++ G+ PD ++T N I G G+ +AL
Sbjct: 124 LINCFCQLGLIPFAFSVLAKILKMGYEPD--------IITLNTFIKGFCLKGQIHQALNF 175
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSG--- 123
+ +G D VS+ +++G ++GE R A L +D +++Q N ++ + G
Sbjct: 176 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYK 235
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
D+Y ++ K+ D V Y++LI + G++ A L +++ +++ V
Sbjct: 236 DKHVNDAFDLYSEMVAKRIS-PDVVTYSALIRGFFIVGKLKDAIDLFNKMI-LENIKPDV 293
Query: 176 -IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIEN-CSNNEF------ 226
+++L+ G K+ R ++AK +L + + P + TF+TL++ C + +
Sbjct: 294 YTFNILVDGFCKEGRLKKAKNVLDMM---MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 350
Query: 227 -------------TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ L+ G+ + N+A + NTM + YN +I C+
Sbjct: 351 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 410
Query: 274 CDNGDKAYDMYM 285
DKA +++
Sbjct: 411 IKKVDKAMKLFI 422
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 56/289 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ + ++G + + QM +G P+FVT N LI+ G
Sbjct: 83 AFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVT--------FNILINCFCQLGLI 134
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A +L + +MG PD ++ + GF G++ +A + + ++A+
Sbjct: 135 PFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNF---------HDKLVAL--- 182
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ--SVIYDV 179
G LD+V+Y +LIN C GE A LL + G + Q +V+Y+
Sbjct: 183 ------------GFHLDQVSYGTLINGLCKVGETRAALQLLRRVD--GKLVQLNAVMYNT 228
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+I G+ K +A + +V + T + L++GF I
Sbjct: 229 VIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYS-----------------ALIRGFFIV 271
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC---RCDNGDKAYDMYM 285
+A + N M+ N KPD +N L+ C R DM M
Sbjct: 272 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMM 320
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 131/327 (40%), Gaps = 89/327 (27%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRG- 70
+C KG+ +A + HD+++ GF D V+ LI+GL G AL++LR
Sbjct: 163 FCLKGQIHQALNFHDKLVALGFHLD--------QVSYGTLINGLCKVGETRAALQLLRRV 214
Query: 71 ----------------------------------MPEMGLFPDTVSFTAVVSGFFRIGEL 96
M + PD V+++A++ GFF +G+L
Sbjct: 215 DGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKL 274
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+ A DL ++M+ N I+P DVY + L++ +C +G +
Sbjct: 275 KDAIDL---FNKMILEN----IKP---DVY--------------TFNILVDGFCKEGRLK 310
Query: 157 KAKTLLDELTHFGDVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL--- 212
KAK +LD + D++ +V ++ L+ G K + +E K + ++ + T
Sbjct: 311 KAKNVLDMMM-IQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSL 369
Query: 213 ---------------TFDTLIENCSNNEFTSLVELVKGF-RIRDLENEAASVLNTMLHWN 256
F+T+ + S ++ GF +I+ ++ +A + M H +
Sbjct: 370 MDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD-KAMKLFIEMHHKH 428
Query: 257 DKPDGAVYNFLIVEHCRCDNGDKAYDM 283
PD YN LI C+ A+ +
Sbjct: 429 IIPDVVTYNSLIDGLCKSGKISYAFQL 455
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G KA ++ D M+ + + P++ T N L+ G +
Sbjct: 293 VYTFNILVDGFCKEGRLKKAKNVLDMMM--------IQDIKPNVSTFNTLVDGFCKDRKM 344
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM----------MQ 111
+E + M + G+ P+ V++ +++ G+ + ++ KA + M + +
Sbjct: 345 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIM 404
Query: 112 SNNMLAIQPLSGDVYWSL-MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
N I+ + + + M + + D V Y SLI+ C G++ A L++E+ G
Sbjct: 405 INGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQ 464
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLS---LVYHLCTS 207
+ Y+ +++ L K + Q + + + L+ LC S
Sbjct: 465 PPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQS 504
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 48/257 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------EFSPSL 45
L+ C KG+ +AF HD+++ GF D V+ L
Sbjct: 139 LIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKL 198
Query: 46 VTCNALIHGLGFFG-----RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
V NA+++ +G +A ++ M G+ P+ V+++A++SGFF +G+L+ A
Sbjct: 199 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 258
Query: 101 DL--KLEMDEMMQSNNMLAI---------QPLSGDVYWSLMGKQGGLLDEVNYTSLINAY 149
DL K+ ++ + I + G +++M KQG + D V Y SL++ Y
Sbjct: 259 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGY 318
Query: 150 CADGEVVKAKTLLDELTHFG---DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
C EV AK++ + + G D+R Y++LI+G K + +A + + H C
Sbjct: 319 CLVKEVNTAKSIFNTMAQGGVNPDIRS---YNILINGFCKIKKVDKAMNLFNEM--H-CK 372
Query: 207 SSWP-TLTFDTLIENCS 222
+ P +T+++LI+ S
Sbjct: 373 NIIPNVVTYNSLIDGLS 389
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 30/256 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P+ +T N LI GL G+ +A + +G D VS+ ++ G ++GE R A
Sbjct: 129 YHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 188
Query: 101 DLKLEMD-EMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNYTSLINA 148
DL +D +++Q N ++ + G D+Y ++ K G + V Y++LI+
Sbjct: 189 DLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK-GISPNVVTYSALISG 247
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
+ G++ A L +++ +++L+ G K + +E K + ++
Sbjct: 248 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 307
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+T+++L++ G+ + N A S+ NTM PD YN LI
Sbjct: 308 --VVTYNSLMD---------------GYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 350
Query: 269 VEHCRCDNGDKAYDMY 284
C+ DKA +++
Sbjct: 351 NGFCKIKKVDKAMNLF 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C + KA ++ ++M K +P+ +VT N+LI GL GR
Sbjct: 345 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN--------VVTYNSLIDGLSKSGRISY 396
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+++ M + G+ P+ +++ +++ F+ ++ KA L + + IQP S
Sbjct: 397 ALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ-------GIQP-SM 448
Query: 124 DVYWSLMG---KQGGLLDEVN-YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
Y L+ K G VN Y +I+ +C G +A +LL ++ + +V Y++
Sbjct: 449 YTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 508
Query: 180 LISGLDKKARTQEAKKMLLSLV 201
I L +A+K+ ++
Sbjct: 509 TIRSLLDNNENDKAEKLFREMI 530
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +M YC S+A ++++M KG PD L+T N LI GL GR
Sbjct: 270 FLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPD--------LITYNTLIFGLSKSGRVS 321
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA ++LR M E G FPD V++T++++G R GE A L EM+ S N L
Sbjct: 322 EAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLL 381
Query: 123 GDVYWSLM----------GKQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ S M K GL LD +Y + + A C+ G V A + D +
Sbjct: 382 HGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSL 441
Query: 172 RQSVIYDVLISGLD--KKARTQEAK 194
Y L S L KKA+ + K
Sbjct: 442 SDVAAYSTLESTLKWFKKAKEEGLK 466
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 32/183 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C+ +A + D + +GF PD N ++ G R E
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPD--------CFLYNTIMKGYCMLSRGSE 287
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E+ M E G+ PD +++ ++ G + G + +A L
Sbjct: 288 AIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKL--------------------- 326
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+M ++G DEV YTSL+N C GE + A LL+E+ G + Y+ L+ G
Sbjct: 327 ---LRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHG 383
Query: 184 LDK 186
L K
Sbjct: 384 LCK 386
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 58/291 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + A+ ++ +M+ K P+ +VT + LI+G G+ ++A
Sbjct: 205 YTTIIDSLCKDKLVTDAYELYSEMVEKKIFPN--------VVTYSTLIYGFCIVGQLKDA 256
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F ++ G + GE+RKA +L
Sbjct: 257 VRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNL---------------------- 294
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
LM K G L+ V Y+SL++ Y EV KAK + + + +G Y+++I GL
Sbjct: 295 --LGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGL 352
Query: 185 DKKARTQEA----KKMLL-----------SLVYHLCTSSWPTLTFDTLIENCSNNE---- 225
EA KKM L SL+Y LC S + D + E C +
Sbjct: 353 CNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANV 412
Query: 226 --FTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+TSL++ L K + ++A ++ M +P+ YN LI C+
Sbjct: 413 ITYTSLMDALCKNHNL----DKAIALFTKMKDLGVEPNVYTYNILIDRLCK 459
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 51/271 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM Y E +KA + + M+ G SP++ + N +I GL +E
Sbjct: 309 TYSSLMDGYFQVNEVNKAKDVFEIMVRWGV--------SPNIHSYNIMIDGLCNSKMVDE 360
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + P+TV++ +++ G + G + DL EM + Q+ N+
Sbjct: 361 AVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANV-------- 412
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ YTSL++A C + + KA L ++ G Y++LI
Sbjct: 413 ----------------ITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDR 456
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
L K R +A ++ + H +T+ +LI+ C N+ +E +I D
Sbjct: 457 LCKSGRIADAWYLIDEM--HDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFT--KIND-- 510
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
W + D Y LI C+
Sbjct: 511 ------------WGIQADVHTYTVLIDGLCK 529
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPS-LVTCNALIHGLGFFGR 60
Y Y L+ C G + A+++ D+M +G P+ +VT +LI GL
Sbjct: 447 VYTYNILIDRLCKSGRIADAWYLIDEMHDRG---------QPANVVTYTSLIDGLCKNHN 497
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
++A+E + + G+ D ++T ++ G + G L+ A ++
Sbjct: 498 LDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEV------------------ 539
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
+ ++ +G LD + YT +I+ C +G + TLL ++ G ++ Y+++
Sbjct: 540 ------FRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEII 593
Query: 181 ISGLDKKARTQEAKKMLLSLV 201
I L K + A+K+L ++
Sbjct: 594 ICALFGKGKIDMAEKLLCEMI 614
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 44/255 (17%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
+P + ++ L A+ + M G+ P+ V+ T +++ F + +L A+
Sbjct: 59 TPPIFEFGKILSSLVKLNHFHTAISFSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFS 118
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
+ + ++++ L +P + V T+LIN C +GEV KA
Sbjct: 119 I---LGKILK----LGYEP-----------------NTVTLTTLINGLCLNGEVKKAFHF 154
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML---------------LSLVYHLCT 206
D++ Y +LI+GL K T+ A +L +++ LC
Sbjct: 155 YDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCK 214
Query: 207 SSWPTLTFDTLIENCSNNEFTSLV---ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAV 263
T ++ E F ++V L+ GF I +A + N M+ N PD V
Sbjct: 215 DKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPD--V 272
Query: 264 YNFLIVEHCRCDNGD 278
Y F I+ C NG+
Sbjct: 273 YTFNILIDGLCKNGE 287
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ L+ C KG+ S+A + D M KG +P+ VT N+L+HGL G+ ++
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTY--------NSLVHGLCLKGKLDK 298
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L M P+ ++F +V GF + G + + ++E N + L
Sbjct: 299 AMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 358
Query: 124 DVY-----------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
++ W M ++G + + Y++LI+ C +G+ +AK L E+ + G
Sbjct: 359 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 418
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLV- 230
S Y L+ G + +A + + + C + + LI C N + +
Sbjct: 419 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH--EVCYSILINGLCKNGKLKEALI 476
Query: 231 ------------------ELVKGFRIRDLENEAASVLNTMLHWNDK--PDGAVYNFLIVE 270
++ GF L + + N ML N K PD YN L+
Sbjct: 477 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNA 536
Query: 271 HCRCDNGDKAYDM 283
C ++ +A D+
Sbjct: 537 FCTKNSVSRAIDI 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 41/236 (17%)
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
T + L+HGL GR +EA+ +L M G FP+ V+F ++S + G+L +A L +
Sbjct: 212 TYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKL---V 268
Query: 107 DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
D M +G + +EV Y SL++ C G++ KA +LL+ +
Sbjct: 269 DNMFL---------------------KGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMV 307
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEF 226
V + + L+ G K R + ++L+SL + NEF
Sbjct: 308 ANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEE----------------KGYRGNEF 351
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
S L+ G + M+ KP+ VY+ LI CR D+A +
Sbjct: 352 -SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 44/203 (21%)
Query: 78 PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL 137
P+ +SF V+ R+G + +A +E+ M N +A
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQA----VEVFRGMSDRNCVA-------------------- 208
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
D Y++L++ C +G + +A +LLDE+ G V ++VLIS L KK A K++
Sbjct: 209 DGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLV 268
Query: 198 LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWND 257
++ ++ C NE T LV G ++ ++A S+LN M+
Sbjct: 269 DNM----------------FLKGCVPNEVT-YNSLVHGLCLKGKLDKAMSLLNRMVANKC 311
Query: 258 KPDGAVYNFLI---VEHCRCDNG 277
P+ + L+ V+H R +G
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDG 334
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +M C G S+A + +M KG P+LVT LI GL FGR +E
Sbjct: 234 VYSTVMDGLCKDGLVSEALGLCLEMSGKGI--------KPNLVTYTCLIQGLCNFGRWKE 285
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD------LKLEMDEMMQSNNMLA 117
A +L M +MG+ PD S +V + G++ +A L E+ ++ N+++
Sbjct: 286 AGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLID 345
Query: 118 IQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L + + LM +G L D V YTSLI+ +C + KA LLDE+ G
Sbjct: 346 RYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTP 405
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSL 200
V + LI G + R AK++ L++
Sbjct: 406 DVVTWTTLIGGFCQVGRPLAAKELFLNM 433
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +L+ YC + + +A + + M+ +G LPD V S LIHG
Sbjct: 337 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS--------LIHGWCKIKNI 388
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI--- 118
+A+ +L M ++G PD V++T ++ GF ++G A +L L M + Q N+
Sbjct: 389 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 448
Query: 119 -------QPLSGDV-YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
Q LS + + M K L+ V Y+ +++ C+ G++ A L L G
Sbjct: 449 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 508
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
Y ++I+G K+ +A+ +L
Sbjct: 509 QINVYAYTIMINGFAKQGLLDKAEDLL 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY +L+ +C +KA H+ D+MI GF PD +VT LI G GR
Sbjct: 374 AYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD--------VVTWTTLIGGFCQVGRPLA 425
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-------KLEMDEMMQS---N 113
A E+ M + G P+ + ++ G + L +A L L+++ ++ S +
Sbjct: 426 AKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILD 485
Query: 114 NMLAIQPLSGDV-YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
M + L+ + +S + +G ++ YT +IN + G + KA+ LL + G +
Sbjct: 486 GMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMP 545
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
S Y+V + GL + + K L
Sbjct: 546 DSCTYNVFVQGLVAEREIARSIKYL 570
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
PS+VT LI+GL G A+E++ + + G D ++ +++G ++G+ +A
Sbjct: 158 LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAV 217
Query: 101 DLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLDEVNYTSLINAY 149
+M+E + N++ + G V +L M +G + V YT LI
Sbjct: 218 GWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGL 277
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C G +A +LLDE+ G + ++L+ L K+ + +AK ++ ++ L
Sbjct: 278 CNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI--LVGEVP 335
Query: 210 PTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
T+++LI+ C N+ +EA V M+ PD Y LI
Sbjct: 336 DVFTYNSLIDRYCLQNQM----------------DEATRVFELMVSRGCLPDIVAYTSLI 379
Query: 269 VEHCRCDNGDKA 280
C+ N +KA
Sbjct: 380 HGWCKIKNINKA 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 28/255 (10%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P N +I+ L +L M ++GL P V+FT +++G G++ +A
Sbjct: 123 IKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAV 182
Query: 101 DLKLEMDEM----------MQSNNMLAIQPLSGDVYW-SLMGKQGGLLDEVNYTSLINAY 149
+L +++ + N + + S V W M ++ + V Y+++++
Sbjct: 183 ELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGL 242
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C DG V +A L E++ G V Y LI GL R +EA +L
Sbjct: 243 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLL------------ 290
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
D +++ + SL LV +A SV+ M+ + PD YN LI
Sbjct: 291 -----DEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLID 345
Query: 270 EHCRCDNGDKAYDMY 284
+C + D+A ++
Sbjct: 346 RYCLQNQMDEATRVF 360
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 25/267 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C +GE KA ++ MI + PD ++T N+L+ G +
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPD--------VITYNSLMDGYFLVKQEN 241
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
+A + M G+ PD S++ +++G + + +A +L EM + N + L
Sbjct: 242 KATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301
Query: 122 -----SGDVY--WSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SG ++ W L M +G D + Y SL++A C + +V KA TLL ++ G
Sbjct: 302 DGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQ 361
Query: 172 RQSVIYDVLISGLDKKAR---TQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN--CSNNEF 226
Y +L+ GL K R QE ++LL YHL + L+ + +E+ C+ N
Sbjct: 362 PDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPV 421
Query: 227 TSLVELVKGFRIRDLENEAASVLNTML 253
T + L++ D+ ++A +L M+
Sbjct: 422 TFEI-LIRALFENDMNDKAVELLREMI 447
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C AF ++ QM+ K SP ++T N L++G GR +EA
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLK--------RISPDVITYNTLMYGCLIVGRLKEA 173
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-----LKLEMD-EMMQSNNM--- 115
+ + M + PD +F +V G + GE++KA + +K +D +++ N++
Sbjct: 174 VGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDG 233
Query: 116 --LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
L Q ++ M ++G D +Y+ +IN C V +A LL E+
Sbjct: 234 YFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPN 293
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIEN-CSNNEFTSLV 230
+V Y LI GL K R +A LV + P +T+++L++ C N++
Sbjct: 294 TVTYSSLIDGLHKSGRIFDA----WDLVNEMHNRGQPADVITYNSLLDALCKNHQV---- 345
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
++A ++L + +PD +Y + I+ C NG
Sbjct: 346 ------------DKAITLLTKIKDQGIQPD--IYTYTILVDGLCKNG 378
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 118/276 (42%), Gaps = 51/276 (18%)
Query: 9 MGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEIL 68
+G C + + H HD +I KGF + V+ LI GL G A+++L
Sbjct: 56 LGQVCLNDKVKETLHFHDDVIAKGF--------QLNQVSYGTLIDGLCKAGETRAAMQVL 107
Query: 69 RGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWS 128
R + + + P+ V ++ ++ + + A+DL +M ++ +S DV
Sbjct: 108 RNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM----------LLKRISPDV--- 154
Query: 129 LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDKK 187
+ Y +L+ G + +A L +++ +++ + +++L+ GL K+
Sbjct: 155 -----------ITYNTLMYGCLIVGRLKEAVGLFNQML-LKNIKPDIYTFNILVDGLCKE 202
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAAS 247
++A+ +L ++ + +T+++L++ G+ + EN+A
Sbjct: 203 GEMKKARNVLAVMIKQ--SVDPDVITYNSLMD---------------GYFLVKQENKATF 245
Query: 248 VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
V NTM PD Y+ +I C+ D+A ++
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNL 281
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 36/290 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G +A + M+ +G PD +VT N+L+ G
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD--------IVTYNSLMDGYCLVNEV 331
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A IL M G+ S+ V++GF +I + +A L EM N++ L
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSL 391
Query: 122 ------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
SG + ++L M +G D + Y+S+++A C + V KA LL +L G
Sbjct: 392 IDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y +LI GL K R ++A+ + F+ L+ N +
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNI-----------------FEDLLVKGYNLTVNTYT 494
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+++GF L +EA S+L+ M + PD Y +I D DKA
Sbjct: 495 VMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKA 544
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ + S ++VT +ALI G G+ ++A
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSR--------RISSNIVTYSALISGFCIVGKLKDA 264
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F +V F + G +++A N LA
Sbjct: 265 IGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA-------------KNGLA------- 304
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG D V Y SL++ YC EV AK++L+ ++H G Y+++I+G
Sbjct: 305 ----MMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGF 360
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELV 233
K +A K L ++H +P +T+++LI+ C + + +EL+
Sbjct: 361 CKIKMVDQAMK-LFKEMHH--KQIFPNVITYNSLIDGLCKSGRISYALELI 408
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G AF + +++ G+ PD +T N I G G+ +AL
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPD--------TITLNTFIKGFCLKGQIHQALNF 162
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-------KLEMDEMMQS---NNMLA 117
+ +G D VS+ +++G ++GE R A +L +++D +M S ++M
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK 222
Query: 118 IQPLSG--DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ ++ D+Y ++ ++ + V Y++LI+ +C G++ A L +++T
Sbjct: 223 DKNVNDAFDLYSEMVSRRIS-SNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
+++L+ K+ R +EAK L ++ +T+++L++ G
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQ--GIKPDIVTYNSLMD---------------G 324
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + + N A S+LNTM H YN +I C+ D+A ++
Sbjct: 325 YCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ +C +A + +M HK + P+++T N+LI GL GR
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHK--------QIFPNVITYNSLIDGLCKSGRISY 403
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
ALE++ M + G PD +++++++ + + KA L +++ + NM L
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ +++ L+ K G L YT +I +C+ G +A +LL ++ +
Sbjct: 464 GLCKGGRLEDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
++ Y+++I L K +A+K+L ++
Sbjct: 523 PDAITYEIIICSLFDKDENDKAEKLLREMI 552
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 102/268 (38%), Gaps = 53/268 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++G + + +M ++G P+FV N LI+ G A +
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN--------FNILINCFCQLGLIPFAFSV 127
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L + +MG PDT++ + GF G++ +A + + ++A+
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH---------DKLVAL--------- 169
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ--SVIYDVLISGLD 185
G LD+V+Y +LIN C GE A LL + G + Q V+Y +I +
Sbjct: 170 ------GFHLDQVSYGTLINGLCKVGETRAALELLRRVD--GKLVQLDVVMYSTIIDSMC 221
Query: 186 KKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEA 245
K +A + +V +S+ T + L+ GF I +A
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYS-----------------ALISGFCIVGKLKDA 264
Query: 246 ASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ N M N PD +N L+ C+
Sbjct: 265 IGLFNKMTSENINPDVYTFNILVDAFCK 292
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 123/305 (40%), Gaps = 72/305 (23%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
Y + LM +C G+ A + D++ +G P V+
Sbjct: 226 VYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKS 285
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
SP + T +ALI+GL R EEA + M EMGL P+ V+FT ++ G + G
Sbjct: 286 VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHG 345
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
++ DL L E+M+ I+P D + Y +LIN C DG+
Sbjct: 346 KI----DLALRNFEIMKDR---GIRP-----------------DLITYNALINGLCRDGD 381
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ +A+ LL+E+ G + + L+ G K A ++ +V +
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEE-------GIEL 434
Query: 215 DTLIENCSNNEFTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
D + FT+L+ L + R+RD E +L ML KPD Y +I C
Sbjct: 435 DDV-------AFTALISGLCRDGRVRDAER----MLKDMLSAGHKPDDPTYTMVI--DCF 481
Query: 274 CDNGD 278
C GD
Sbjct: 482 CKKGD 486
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ L+ C G+ A + M +G PD L+T NALI+GL G +E
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPD--------LITYNALINGLCRDGDLKE 384
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPLS 122
A ++L M G PD ++FT ++ G + G++ A ++K M +E ++ +++ +S
Sbjct: 385 ARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALIS 444
Query: 123 G--------DVYWSL--MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G D L M G D+ YT +I+ +C G+V LL E+ G V
Sbjct: 445 GLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVP 504
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLV 201
V Y+ L++G K+ + + AK +L +++
Sbjct: 505 GVVTYNALMNGFCKQGQMKNAKMLLHAML 533
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G+ +A + ++MI GF PD +T L+ G G +
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPD--------KITFTTLMDGCCKDGDMDS 419
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNN-------ML 116
ALEI M E G+ D V+FTA++SG R G +R A + + +M+ + + +
Sbjct: 420 ALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERM---LKDMLSAGHKPDDPTYTM 476
Query: 117 AIQPL--SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
I GDV M + G + V Y +L+N +C G++ AK LL + +
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 170 DVRQSVIYDVLISGLDKKARTQEAK 194
V + +++L+ G K + + K
Sbjct: 537 VVPNDITFNILLDGHCKHGSSVDFK 561
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ YC +A + D+MI G +P+ T NALI G G
Sbjct: 286 SYTTIISGYCKLSRMKEASSLFDEMIRSGTMPN--------AFTFNALIDGFVKLGDMAS 337
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+L + M G PD V+FT++++G+F +G+++ A LEM
Sbjct: 338 SLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPA----LEM----------------- 376
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
W+ M + ++ L+N +C + + +A+ +L L V QS +Y+ +I G
Sbjct: 377 ---WNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDG 433
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
K EA K+L + + C T T +I +CS
Sbjct: 434 YCKSGNVDEANKILAEMEENRCKPDKLTYTI-LIIGHCS 471
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 43/280 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM C GE +A + + G PD ++T N +IHG + A
Sbjct: 219 LMRGLCRAGEIDEACKLLGDLRSFGCSPD--------VITYNTIIHGFCRISEVDRARSF 270
Query: 68 LRGMPEMG-LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS---- 122
L + G + PD VS+T ++SG+ ++ +++A L DEM++S M +
Sbjct: 271 LNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSL---FDEMIRSGTMPNAFTFNALID 327
Query: 123 -----GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
GD+ SL M +G D V +TSLIN Y G+V A + +E+
Sbjct: 328 GFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAA 387
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
+ VL++G K R EA+ +L L + + + N +
Sbjct: 388 SLYTFSVLVNGFCKNNRLHEARDILTRL-------KQSDVVPQSFVYN----------PV 430
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ G+ +EA +L M KPD Y LI+ HC
Sbjct: 431 IDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIGHC 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 45/261 (17%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ P T N L+ GL G +EA ++L + G PD +++ ++ GF RI E+ +A
Sbjct: 208 RYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRA 267
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
++E+ L+G V D V+YT++I+ YC + +A
Sbjct: 268 RSF---LNEVC----------LNGQV----------APDVVSYTTIISGYCKLSRMKEAS 304
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI- 218
+L DE+ G + + ++ LI G K + M +++ C +TF +LI
Sbjct: 305 SLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPD--VVTFTSLIN 362
Query: 219 ----------------ENCSNNEFTSLVE---LVKGFRIRDLENEAASVLNTMLHWNDKP 259
E S SL LV GF + +EA +L + + P
Sbjct: 363 GYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVP 422
Query: 260 DGAVYNFLIVEHCRCDNGDKA 280
VYN +I +C+ N D+A
Sbjct: 423 QSFVYNPVIDGYCKSGNVDEA 443
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 33/298 (11%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ C +GE A + D+M GF P +++CN +++G GR +
Sbjct: 59 YTYNMLIDGICKRGEVKGAQELLDEMKRVGFPP-------SDMISCNVVLNGFCKTGRLK 111
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPL 121
EAL + + + G + S+T++++GFF+ R+A +M +E + + +L +
Sbjct: 112 EALSFVWLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMI 171
Query: 122 SGDVYWSLMGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G +G+ G +L+E+N Y +I C G VV+AK L + + G
Sbjct: 172 RGLSEEGRVGEAGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVEAKELFNRMEKLGCE 231
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V ++ LI+GL K +EA ++L Y + + F +C ++ SL +
Sbjct: 232 LSIVTFNALINGLCKAKNLEEA----MNLFYKMDVGRKYSFRFSLSQGSCQVSDGASLQK 287
Query: 232 LVKGFRIRDLENEAASVLNTMLHWND-----KPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VK EA +L D + D YN LI C + AY+++
Sbjct: 288 KVKEM------CEAGQILKAYKLITDHAGDLRLDIISYNILINAFCLDREFNAAYNLF 339
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFP-DTVSFTAVVSGFFRIGELRKAYD 101
P+ T N LI G+ G + A E+L M +G P D +S V++GF + G L++A
Sbjct: 56 PNFYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLKEALS 115
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
W L+ K G L+ +YTSLIN + +A+
Sbjct: 116 F-----------------------VW-LIKKDGFSLNRNSYTSLINGFFKARRYREARVW 151
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENC 221
++ G V V+Y ++I GL ++ R EA KML + + LT D N
Sbjct: 152 YTKMFEEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLEEM-------NQIGLTHDAYCYNV 204
Query: 222 SNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
+++G + EA + N M + +N LI C+ N ++A
Sbjct: 205 ----------VIQGLCDVGMVVEAKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAM 254
Query: 282 DMY 284
+++
Sbjct: 255 NLF 257
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 45/210 (21%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC-NALIHGLGFFGRAEE 63
Y ++ ++G +A M ++M G D C N +I GL G E
Sbjct: 167 YAIMIRGLSEEGRVGEAGKMLEEMNQIGLTHD---------AYCYNVVIQGLCDVGMVVE 217
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD---------------- 107
A E+ M ++G V+F A+++G + L +A +L +MD
Sbjct: 218 AKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQGSC 277
Query: 108 -------------EMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
EM ++ +L L D L LD ++Y LINA+C D E
Sbjct: 278 QVSDGASLQKKVKEMCEAGQILKAYKLITDHAGDLR------LDIISYNILINAFCLDRE 331
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
A L +EL G SV Y +I GL
Sbjct: 332 FNAAYNLFEELQKKGLSPDSVTYGTIIKGL 361
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 56/290 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C ++AF ++ +M+ KG SP +VT +ALI G G+ +A
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGI--------SPDVVTYSALISGFCILGKLNDA 250
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F+ +V GF + G +++A N+LA
Sbjct: 251 IGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA-------------KNVLA------- 290
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG D V Y SL++ YC +V KAK++ + + G Y+++I+G
Sbjct: 291 ----MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K + EA + + H C + P +T+++LI+ C + + + ++LV R +
Sbjct: 347 CKIKKVDEAMNLFKEM--H-CKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 243 -------------------NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
++A ++L M +PD Y LI C+
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 36/290 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G +A ++ M+ +G PD VT S L+ G +
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS--------LMDGYCLVKQV 317
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNM 115
+A I M + G+ + S+ +++GF +I ++ +A +L EM +++ N++
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377
Query: 116 LAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ SG + ++L M +G D++ Y S+++A C + +V KA LL ++ G
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y +LI GL K R ++A+ + F+ L+ N +
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNI-----------------FEDLLVKGYNITVYTYT 480
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+++GF DL ++A ++L+ M P+ Y +I+ D D A
Sbjct: 481 VMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMA 530
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ +C + +A ++ +M K +PD +VT N+LI GL G+
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPD--------VVTYNSLIDGLCKSGKISY 389
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPLS 122
AL+++ M + G+ D +++ +++ + ++ KA L +M DE +Q + +
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449
Query: 123 G-----------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G +++ L+ K G + YT +I +C + KA LL ++ G +
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVK-GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCI 508
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ Y+++I L +K A+K+L ++
Sbjct: 509 PNAKTYEIIILSLFEKDENDMAEKLLREMI 538
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G F +A+ + + M +GF SP+L T NA+++GL GR +E
Sbjct: 323 TYTTLIDGHCKAGNFERAYDLMNLMSSEGF--------SPNLCTYNAIVNGLCKRGRVQE 374
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP--- 120
A ++L + GL PD ++ ++S + +R+A L ++M++ + IQP
Sbjct: 375 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALAL---FNKMLK----IGIQPDIH 427
Query: 121 ---------------LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
++++ + G + YTS+I YC +G + A L
Sbjct: 428 SYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRL 487
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ G S+ Y +ISGL K+++ EA+ + S++
Sbjct: 488 SDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMI 523
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI-LRGM 71
C +G +AF M ++M+ KG+ P+ T S LI GL G E+A + L+ +
Sbjct: 226 CKRGSIKQAFEMLEEMVGKGWKPNVYTHTS--------LIDGLCKKGWTEKAFRLFLKLV 277
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
P+ +++TA++SG+ R +L +A EM+ S M
Sbjct: 278 RSENHKPNVLTYTAMISGYCREDKLNRA--------EMLLSR----------------MK 313
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
+QG + + YT+LI+ +C G +A L++ ++ G Y+ +++GL K+ R Q
Sbjct: 314 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 373
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
EA KML D ++FT + + + + ++ +A ++ N
Sbjct: 374 EAYKMLE----------------DGFQNGLKPDKFTYNILMSEHCKQENIR-QALALFNK 416
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
ML +PD Y LI CR +N K +M+
Sbjct: 417 MLKIGIQPDIHSYTTLIAVFCR-ENRMKESEMF 448
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ + + G +A M +M ++G +P+ T N +I G E A +
Sbjct: 81 MVESFSEVGRLKEAVEMVIEMHNQGLVPN--------TRTLNWIIKVTSEMGLVEYAELL 132
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-LKLEMDEMMQSNN---MLAIQPLSG 123
M G+ PD++S+ +V + +IG + +A L + ++ +N L I SG
Sbjct: 133 FEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSG 192
Query: 124 DVY-----WSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
Y W MG + L +N+T +I C G + +A +L+E+ G
Sbjct: 193 KGYTTRALWYFRRLVDMGLEPNL---INFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPN 249
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
+ LI GL KK T++A ++ L LV EN N T ++
Sbjct: 250 VYTHTSLIDGLCKKGWTEKAFRLFLKLVRS---------------ENHKPNVLT-YTAMI 293
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
G+ D N A +L+ M P+ Y LI HC+ N ++AYD+
Sbjct: 294 SGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 343
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 31/192 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +L+ C KG KAF + +++ P+++T A+I G +
Sbjct: 250 VYTHTSLIDGLCKKGWTEKAFRLFLKLVRS-------ENHKPNVLTYTAMISGYCREDKL 302
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A +L M E GL P+T ++T ++ G + G +AYDL
Sbjct: 303 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL------------------- 343
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+LM +G + Y +++N C G V +A +L++ G Y++L+
Sbjct: 344 -----MNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILM 398
Query: 182 SGLDKKARTQEA 193
S K+ ++A
Sbjct: 399 SEHCKQENIRQA 410
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 44/292 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ +C+KG ++A +++ G P+L+ +I GL G ++A E+
Sbjct: 204 IISRFCEKGYATRALWYFRRLVDMGL--------EPNLINFTCMIEGLCKRGSIKQAFEM 255
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--KLEMDEMMQSNNMLAIQPLSG-- 123
L M G P+ + T+++ G + G KA+ L KL E + N + +SG
Sbjct: 256 LEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYC 315
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
++ S M +QG + + YT+LI+ +C G +A L++ ++ G
Sbjct: 316 REDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVC 375
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS---LVEL 232
Y+ +++GL K+ R QEA KML D + FT + E
Sbjct: 376 TYNAIVNGLCKRGRVQEAYKMLE----------------DGFQNGLKPDRFTYNILMSEH 419
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
K IR +A + N M+ +PD Y LI CR +N K +M+
Sbjct: 420 CKQANIR----QALVLFNKMVKSGIQPDIHSYTTLIAVFCR-ENRMKESEMF 466
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G F +A+ + + M +GF SP++ T NA+++GL GR +E
Sbjct: 341 TYTTLIDGHCKAGNFERAYDLMNLMSSEGF--------SPNVCTYNAIVNGLCKRGRVQE 392
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP--- 120
A ++L + GL PD ++ ++S + +R+A L ++M++S IQP
Sbjct: 393 AYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVL---FNKMVKS----GIQPDIH 445
Query: 121 ---------------LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
++++ + G + YTS+I YC +G + A L
Sbjct: 446 SYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCREGNLTLAMKFFHRL 505
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ G S+ Y +ISGL K+++ EA+ + S++
Sbjct: 506 SDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSMI 541
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 53/292 (18%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+ + G +A M +M ++G +P+ T N +I G E A + M
Sbjct: 103 FSEVGRLKEAVEMVIEMHNQGLVPN--------TRTLNLIIKVTSEMGLVEYAELLFEEM 154
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G+ PD+VS+ +V + +IG + L D + S M
Sbjct: 155 CVRGVQPDSVSYRVMVVMYCKIGNI------------------------LEADRWLSAML 190
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
++G ++D +T +I+ +C G +A L G + + +I GL K+ +
Sbjct: 191 ERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIK 250
Query: 192 EAKKML---------------LSLVYHLCTSSWPTLTFDTLI-----ENCSNNEFTSLVE 231
+A +ML SL+ LC W F + EN N T
Sbjct: 251 QAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLT-YTA 309
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
++ G+ D N A +L+ M P+ Y LI HC+ N ++AYD+
Sbjct: 310 MISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 361
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 41/297 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ +Y ++ YC G +A M+ +GF+ D T F+ +I G A
Sbjct: 163 SVSYRVMVVMYCKIGNILEADRWLSAMLERGFVVDNAT-FT-------LIISRFCEKGYA 214
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
AL R + +MGL P+ ++FT ++ G + G +++A+++ EM N+ L
Sbjct: 215 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 274
Query: 122 ------------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ ++ L+ + + + YT++I+ YC + ++ +A+ LL + G
Sbjct: 275 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQG 334
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW--PTLTFDTLIENCSNNEFT 227
V + Y LI G K + A ++ +L +S P + C+ N
Sbjct: 335 LVPNTNTYTTLIDGHCKAGNFERAYDLM-----NLMSSEGFSPNV--------CTYNA-- 379
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+V G R EA +L KPD YN L+ EHC+ N +A ++
Sbjct: 380 ----IVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLF 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 104/272 (38%), Gaps = 48/272 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +L+ C KG KAF + +++ P+++T A+I G +
Sbjct: 268 VYTHTSLIDGLCKKGWTEKAFRLFLKLVRS-------ENHKPNVLTYTAMISGYCREDKL 320
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A +L M E GL P+T ++T ++ G + G +AYDL
Sbjct: 321 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL------------------- 361
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+LM +G + Y +++N C G V +A +L++ G Y++L+
Sbjct: 362 -----MNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILM 416
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
S K+A ++A + F+ ++++ + S L+ F +
Sbjct: 417 SEHCKQANIRQA-----------------LVLFNKMVKSGIQPDIHSYTTLIAVFCRENR 459
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
E+ + P Y +I +CR
Sbjct: 460 MKESEMFFEEAVRIGIIPTNRTYTSMICGYCR 491
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y +L+ YC E A+ + + M +G L + V+ LIHG G+
Sbjct: 225 SFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSY--------TNLIHGFCEVGKI 276
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EALE+ M E G FPD ++T +V+ F +G+ +A +EM+++ I+P
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF---FEEMVEN----GIEP- 328
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+VY YT LI+ +C G++ + +L + G V V ++ LI
Sbjct: 329 --NVY--------------TYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K+ ++A +L S+ L + C N+ + EL+ GF +
Sbjct: 373 DGYCKRGMMEDAICVLDSM---------------KLNKVCPNSR--TYNELICGFCRKKS 415
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ A ++LN M P+ YN LI C+ D A+ ++
Sbjct: 416 MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 51/271 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C K +A + ++M + + SP+LVT N LIHGL +
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKM--------YENKLSPNLVTYNTLIHGLCKARVVDS 453
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M + G PD +F A + ++G++ +A+
Sbjct: 454 AWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAH----------------------- 490
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V+ SL K +E YT+LI+ YC + A L + G S+ ++VL+ G
Sbjct: 491 QVFESLKEKHAE-ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549
Query: 184 LDKKARTQEAKKMLLSLVYHLCT-SSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
L K+ + ++A +SLV + + PT+ + +T L+E + R D +
Sbjct: 550 LRKEGKVEDA----MSLVDVMGKFDAKPTV-----------HTYTILIEEI--LRESDFD 592
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A L+ M+ +P+ Y I +CR
Sbjct: 593 -RANMFLDQMISSGCQPNVVTYTAFIKAYCR 622
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ YC +FS A + +M+ +G P+ +T N L+ GL G+ E
Sbjct: 506 FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSIT--------FNVLLDGLRKEGKVE 557
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ ++ M + P ++T ++ R + +A + +D+M+ S QP
Sbjct: 558 DAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA---NMFLDQMISS----GCQP-- 608
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ V YT+ I AYC G +++A+ ++ ++ G + S IYDVL++
Sbjct: 609 ---------------NVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
+ A +L+ + C S T
Sbjct: 654 AYGCIGQLDSAFGVLIRMFDTGCEPSRQT 682
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 89/244 (36%), Gaps = 41/244 (16%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
EFS S+ + N L L FG +E + + M G+ P+ +SF +V+ +IG + A
Sbjct: 150 EFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVA 209
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
Y+ + K G D YTSLI YC E+ A
Sbjct: 210 ------------------------KAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAY 245
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+ + + G +R V Y LI G + + EA ++ + C PT T
Sbjct: 246 KVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV----- 300
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
LV F E EA M+ +P+ Y LI C+ D+
Sbjct: 301 ------------LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE 348
Query: 280 AYDM 283
+M
Sbjct: 349 GMEM 352
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 118/277 (42%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA + M +G PD + + N LI G + +E
Sbjct: 331 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD--------IQSYNILIDGFCKIKKVDE 382
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + PD V++ +++ G ++G++ +Y LKL +DEM
Sbjct: 383 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI--SYALKL-VDEMHD------------ 427
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G D + Y+S+++A C + +V KA LL +L G Y +LI G
Sbjct: 428 ---------RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 478
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K R ++A + F+ L+ N + ++ GF + L +
Sbjct: 479 LCKGGRLEDAHNI-----------------FEDLLVKGYNITVNTYTVMIHGFCNKGLFD 521
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L+ M + PD Y +I D DKA
Sbjct: 522 EALTLLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA 558
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 89/332 (26%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ L+ C KG+ +A HD ++ GF D V LIHGL G
Sbjct: 156 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLD--------QVGYGTLIHGLCKVGETRA 207
Query: 64 ALEILRG-----------------------------------MPEMGLFPDTVSFTAVVS 88
AL++LR M G+ P+ V+++A++S
Sbjct: 208 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 267
Query: 89 GFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP------------------LSGDVYWSLM 130
GFF +G+L+ A DL ++M+ N I+P G +++M
Sbjct: 268 GFFTVGQLKDAIDL---FNKMILEN----IKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 320
Query: 131 GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKART 190
KQG + V Y SL++ YC EV KAK++L ++ G Y++LI G K +
Sbjct: 321 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 380
Query: 191 QEAKKMLLSLVY-HLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASV 248
EA + + + H+ +T+++LI+ C + + ++LV R +
Sbjct: 381 DEAMNLFKEMHHKHIIPD---VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP------ 431
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
PD Y+ ++ C+ DKA
Sbjct: 432 ----------PDIITYSSILDALCKNHQVDKA 453
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G AF + +++ G+ P+ +T LI GL G+ +AL
Sbjct: 125 LINCFCQLGLIPFAFSVFAKILRMGY--------HPNTITFTTLIKGLCLKGQIHQALLF 176
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSG--- 123
+ MG D V + ++ G ++GE R A DL +D ++Q N ++ + G
Sbjct: 177 HDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCK 236
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
D+Y ++ K G + V Y++LI+ + G++ A L +++ +++ V
Sbjct: 237 DKHVNDAFDLYSEMVSK-GISPNVVTYSALISGFFTVGQLKDAIDLFNKMI-LENIKPDV 294
Query: 176 -IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
+++L+ G K + +E K + F +++ + L+
Sbjct: 295 YTFNILVDGFCKDGKMKEGKTV-----------------FAMMMKQGIKPNVVTYCSLMD 337
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
G+ + N+A S+L TM PD YN LI C+ D+A +++
Sbjct: 338 GYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 387
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C + +A ++ +M HK +PD +VT N+LI GL G+
Sbjct: 366 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD--------VVTYNSLIDGLCKLGKISY 417
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
AL+++ M + G+ PD +++++++ + ++ KA L ++ + NM L
Sbjct: 418 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 477
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ +++ L+ K G + YT +I+ +C G +A TLL ++ +
Sbjct: 478 GLCKGGRLEDAHNIFEDLLVK-GYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCI 536
Query: 172 RQSVIYDVLISGLDKKARTQEAKKM 196
+V Y+++I L K +A+K+
Sbjct: 537 PDAVTYEIIIRSLFDKDENDKAEKL 561
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 53/274 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + ++G + + QM +G PDF T N LI+ G
Sbjct: 84 AIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFT--------FNILINCFCQLGLI 135
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A + + MG P+T++FT ++ G G++ +A ++ +N++A
Sbjct: 136 PFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQA---------LLFHDNVVA---- 182
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS--VIYDV 179
MG Q LD+V Y +LI+ C GE A LL + G++ Q V+Y
Sbjct: 183 --------MGFQ---LDQVGYGTLIHGLCKVGETRAALDLLRRVD--GNLVQPNVVMYST 229
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+I G+ K +A + +V + + T + L+ GF
Sbjct: 230 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS-----------------ALISGFFTV 272
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+A + N M+ N KPD +N L+ C+
Sbjct: 273 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 306
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C G+ +A + + KG PS++ N LI GL G
Sbjct: 357 FTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL--------RPSIIVYNTLIKGLCQQGLIL 408
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
AL+++ M E G PD ++ +++G ++G L A L
Sbjct: 409 PALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA-------------------NHLI 449
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
GD +G + D Y +L++ YC ++ A L++ + G + Y+ L++
Sbjct: 450 GDAI-----TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 504
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
GL K A+++E ++ ++ C + +T++T+IE+ N++
Sbjct: 505 GLCKTAKSEEVMEIFKAMTEKGCAPN--IITYNTIIESLCNSKKV--------------- 547
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
NEA +L M PD + LI C+ + D AY ++
Sbjct: 548 NEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 589
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
+ Y L+ YC + + A + ++M +G PD +T
Sbjct: 462 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 521
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+P+++T N +I L + EA+++L M GL PD VSF +++GF ++G+
Sbjct: 522 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 581
Query: 96 LRKAYDLKLEMDEMMQSNNMLA-----IQPLSGDV-------YWSLMGKQGGLLDEVNYT 143
L AY L M++ ++ A I S + +S M K G D Y
Sbjct: 582 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 641
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
LI+ +C G V + L E G + + +++ L + + QEA
Sbjct: 642 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEA 691
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 39/302 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y +M + G F++A ++ +M K D + T I GR
Sbjct: 111 VYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD--------VYTYTIRIKSFCRTGRP 162
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP- 120
AL +LR MP +G F + V++ VV+GF+ G+ +A +L EM E ++
Sbjct: 163 YAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKL 222
Query: 121 ----------LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
L + + + K+G + + I C +G + +A LL ++ G
Sbjct: 223 VHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGL 282
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV----------YHLCTSSW---------PT 211
V Y+ +I GL +K+R EA++ L +V Y+ +
Sbjct: 283 RPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANR 342
Query: 212 LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
+ D + + +EFT LV GF ++A +V L +P VYN LI
Sbjct: 343 ILKDAVFKGFKPDEFT-YCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGL 401
Query: 272 CR 273
C+
Sbjct: 402 CQ 403
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 41/308 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C KG ++ + D+++ +G P+L T N I GL G + A+ +
Sbjct: 222 LVHALCKKGFVLESERLFDKVLKRGV--------CPNLFTFNIFIQGLCKEGSLDRAVRL 273
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPLSGDVY 126
L + GL PD V++ V+ G R + +A + +M + + N+ + G
Sbjct: 274 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 333
Query: 127 WSLMGKQGGLL----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
++ +L DE Y SL+N +C DG+ +A + + G ++
Sbjct: 334 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 393
Query: 177 YDVLISGLDKKARTQEAKKMLLSL----------VYHL---------CTSSWPTLTFDTL 217
Y+ LI GL ++ A +++ + Y+L C S L D +
Sbjct: 394 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 453
Query: 218 IENCSNNEFTSLVELVKGFRIRDLE-NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
+ C + FT LV G+ R L+ + A ++N M PD YN L+ C+
Sbjct: 454 TKGCIPDIFT-YNTLVDGY-CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAK 511
Query: 277 GDKAYDMY 284
++ +++
Sbjct: 512 SEEVMEIF 519
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 136/344 (39%), Gaps = 69/344 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDF-------------------------- 37
+ +++ Y KG SKA + +M+ + +P+
Sbjct: 492 TFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEI 551
Query: 38 -VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
V S V + L++ L GR + A +++ M G+ PD V++T+++ G+F+ G
Sbjct: 552 KVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNE 611
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDV----------YWSLMGKQGGLLDEVNYTSLI 146
A + EM E +++A L + S M + G + V Y ++I
Sbjct: 612 SAALSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYDPQNVCSRMIELGLAPNCVTYNTII 671
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
N+YC G + A +L E+ +G + +V Y++LI GL K Q+A +L ++
Sbjct: 672 NSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVV 731
Query: 207 SSWPTLTF-----------DTLIE--------------NCSNNEFTSLVELVKGFRIRDL 241
+ T F DT+++ N T L L +
Sbjct: 732 PTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRL-------GM 784
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
+A VL+ M+ D YN LI +C + +KA+ Y+
Sbjct: 785 TRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYL 828
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC GE A + Q + K +P P+++T +++I+G G +
Sbjct: 457 TYSALLDGYCKLGEMELA-ELVLQKMQKEHVP-------PNVITFSSIINGYAKKGMLSK 508
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIG--ELRKAYDLKLEMDEMMQSN-------- 113
A+++LR M + + P+T + ++ FFR G ++ Y ++++ + +SN
Sbjct: 509 AVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEIKVHRLEESNVIFDILLN 568
Query: 114 ------NMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
M A +PL D M +G D VNYTSLI+ Y +G A +++ E+T
Sbjct: 569 NLKRVGRMDAARPLVKD-----MHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTE 623
Query: 168 FGDVRQSVIYDVLISGLDK--KARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE 225
V + LI GL + K Q ++ L L NC
Sbjct: 624 KNTRFDVVACNTLIKGLLRLGKYDPQNVCSRMIEL---------------GLAPNC---- 664
Query: 226 FTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ ++ + I+ +A +L M + P+ YN LI C+ + KA D+
Sbjct: 665 -VTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADV 721
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC ++ + +QMI G + D +VTC+++++ L G+ E
Sbjct: 317 TYTTLISAYCKFVGVEESLSLSEQMIMNGIMSD--------VVTCSSILYALCRHGKLTE 368
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M EMGL P+ VS+ +++ F+ G + +A++L+ +M S +++ +
Sbjct: 369 AAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMD 428
Query: 124 DVYWSLMGKQGGLLDE-----------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
++ K+ + E V Y++L++ YC GE+ A+ +L ++
Sbjct: 429 GLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPP 488
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ + +I+G KK +A +L +V
Sbjct: 489 NVITFSSIINGYAKKGMLSKAVDVLREMV 517
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+P+ VT N +I+ G E+AL IL M G+ P+ V++ ++ G + G+++KA
Sbjct: 660 LAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAA 719
Query: 101 DLKLEMDEM----MQSNNMLAIQPLS----GDVYWSLMGK---QGGLLDEVNYTSLINAY 149
D+ EM M + ++ S D + K G L Y +LI
Sbjct: 720 DVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVL 779
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C G KAK +LDE+ G V Y+ LI G + ++A K L + + +
Sbjct: 780 CRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNI 839
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
T++TL+ SN L+KG ++ M P+ A Y+ L+
Sbjct: 840 T--TYNTLLWGLSN------AGLMKG---------TDKIVRGMKERGFVPNAATYDILVS 882
Query: 270 EHCRCDNGDKAYDMY 284
+ R N +++ Y
Sbjct: 883 GYGRVGNKEESTKFY 897
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 32/177 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC KAF + QM FV SP++ T N L+ GL G +
Sbjct: 806 TYNALIRGYCTGSHVEKAFKTYLQM--------FVDGISPNITTYNTLLWGLSNAGLMKG 857
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+I+RGM E G P+ ++ +VSG+ R+G ++ EM P +G
Sbjct: 858 TDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREMLTK-------GFVPTTG 910
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
Y LIN + G + KA L +E+ G + S YD+L
Sbjct: 911 -----------------TYNVLINCFAKAGRMHKAGELFNEMRTKGRIPNSSTYDIL 950
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 116/285 (40%), Gaps = 54/285 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ G +AF++ QM+ +G S +VTC ++ GL + +E
Sbjct: 387 SYATIINSLFKSGRVMEAFNLQSQMVVRG--------VSFDIVTCTTIMDGLFKVRKTKE 438
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A E+ + ++ L P+ V+++A++ G+ ++GE+ A +L + +M + + + P
Sbjct: 439 AEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELA---ELVLQKMQKEH----VPP--- 488
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ + ++S+IN Y G + KA +L E+ + + +Y +LI
Sbjct: 489 --------------NVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDA 534
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS--------------------N 223
+ + A + H S + FD L+ N +
Sbjct: 535 FFRAGKQDVANGYYKEIKVHRLEES--NVIFDILLNNLKRVGRMDAARPLVKDMHSKGID 592
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ + L+ G+ E+ A S++ M N + D N LI
Sbjct: 593 PDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNTLI 637
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 118/310 (38%), Gaps = 53/310 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHM----------HDQMIHKGFLP-DFVTEFSPSLVTCNALI 52
Y L+ +C G+ +A + DQ+ + + + + P+LVT LI
Sbjct: 263 TYNTLLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLI 322
Query: 53 HGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS 112
F EE+L + M G+ D V+ ++++ R G+L +A EM EM
Sbjct: 323 SAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEM--- 379
Query: 113 NNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ P + V+Y ++IN+ G V++A L ++ G
Sbjct: 380 ----GLDP-----------------NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSF 418
Query: 173 QSVIYDVLISGLDKKARTQEAKKML-----LSLVYHLCTSS-------------WPTLTF 214
V ++ GL K +T+EA++M L+L + T S L
Sbjct: 419 DIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVL 478
Query: 215 DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
+ + + ++ G+ + + ++A VL M+ N P+ VY LI R
Sbjct: 479 QKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRA 538
Query: 275 DNGDKAYDMY 284
D A Y
Sbjct: 539 GKQDVANGYY 548
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 32/165 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C KG + F + +M+ +G D +T CN L+ G G
Sbjct: 158 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSIT--------CNILVKGYCRIGFVRY 209
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ + + G+ D + ++ G+ G + +A DL M++ + G
Sbjct: 210 AEWVMYNLVDGGVTKDVIGLNTLIDGYCECGLMSQAMDL---MEKRWR-----------G 255
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
DV +D V Y +L+ A+C G++ +A++L +E+ F
Sbjct: 256 DVE----------IDVVTYNTLLKAFCKMGDLKRAESLFNEIFAF 290
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 42/294 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C +GE A M D+M G +P +++ ++++G +
Sbjct: 155 YTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP--------CVLSTTSILYGCCQANNVD 206
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA-----------YDLKLEMDEMMQ 111
EA ++ M E PD +S V++GF ++G L +A + L +
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLI 266
Query: 112 SNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ A + +++ M KQG + D V Y +I +G V +A +L+E+T G
Sbjct: 267 NAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLT 326
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNEFTSLV 230
+ Y+ +I GL A+ + L + H +CT + +
Sbjct: 327 PDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHT------------------ILIC 368
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
E+ K R + EA + N M +P +N LI C+ +N +KA +++
Sbjct: 369 EMCK----RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF 418
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 52/322 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y +L+ + + +A + +M +G +PD +V +I GL GR E
Sbjct: 261 SYSSLINAFFKARRYREAHAWYTKMFKQGIVPD--------VVLYAIMIRGLSKEGRVGE 312
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A ++L M ++GL PD + AV+ G +G L +A L+LE+ E + + I +
Sbjct: 313 AAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTILICEMCK 372
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
++ M K G V + +LIN C + KAK L +L G R+ +
Sbjct: 373 RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKL-EVG--RRHSL 429
Query: 177 YDVLISG---------LDKKARTQ-EAKKMLLS--LVYHLCTSSWP-TLTFDTLIE---- 219
+ L G L KKA+ EA ++L + L+ L P +T++ L+
Sbjct: 430 HLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCM 489
Query: 220 ----NCSNNEFTSLVE-------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
N + N F L + ++KG + D E+EA V M +P +
Sbjct: 490 DREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLS 549
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
VY L+ CR +A+ +Y
Sbjct: 550 VYRTLMTCLCRKSKVSRAFTLY 571
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C E + A++ + + KG+ P SP VT +I GL R +E
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGY-P------SPDNVTYGTIIKGLFMVDREDE 531
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ + M + G P + +++ R ++ +A+ L E + + S + +I L
Sbjct: 532 AFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISALEK 591
Query: 124 DVYWSLMGKQ-GGLLD---------EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
++ + + GLL+ YT L+ +C G+V +A +L L F
Sbjct: 592 YLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKIN 651
Query: 174 SVIYDVLISGLDKKARTQEAKKMLL 198
+ LI GL K+ R +A K+ L
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFL 676
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 136/339 (40%), Gaps = 61/339 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP----------------------DFVTEF 41
+ +++ Y KG SKA + +M+ + +P DF E
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557
Query: 42 SP-----SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
S V + L++ L GR +EA ++ M G+ PD V++ +++ G+F+ G
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDV----------YWSLMGKQGGLLDEVNYTSLI 146
A + EM E +++A L + S M + G D + Y ++I
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTII 677
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
N YC G+ A +L+E+ +G + +V Y++LI GL K ++A+ L + L
Sbjct: 678 NTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEM---LVM 734
Query: 207 SSWPT-LTFDTLIENCSNNE--------------------FTSLVELVKGFRIRDLENEA 245
PT +T L++ S +E T L+ F + +A
Sbjct: 735 EFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA 794
Query: 246 ASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VL+ M+ D YN LI +C + +KA Y
Sbjct: 795 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTY 833
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 49/279 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC ++ ++ +MI G +PD +VTC+++++G G+ E
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD--------VVTCSSILYGFCRHGKLTE 374
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + R M EMGL P+ VS+ +++ F+ G + +A++L+ +M ++ +S
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM----------VVRGISF 424
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D+ V T++++ G+ +A+ + + + V Y L+ G
Sbjct: 425 DI--------------VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
K + + A+ +L + + +TF ++I G+ + + +
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPN--VITFSSIIN---------------GYAKKGMLS 513
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+A VL M+ N P+ VY LI + + D A D
Sbjct: 514 KAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 47/293 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC G+ A + Q + K +P P+++T +++I+G G +
Sbjct: 463 TYSALLDGYCKLGKMELA-ELVLQKMEKEHVP-------PNVITFSSIINGYAKKGMLSK 514
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD--EMMQSNNMLAI--- 118
A+++LR M + + P+T+ + ++ G+F+ GE A D EM + +SN + I
Sbjct: 515 AVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLN 574
Query: 119 -----------QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
+ L D+Y +G D VNY SLI+ Y +G + A +++ E+
Sbjct: 575 NLKRVGRMDEARSLIIDMY-----SKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKE 629
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
V Y+ LI GL + + P +IE +
Sbjct: 630 KNIRFDVVAYNALIKGLLRLGKYD------------------PRYVCSRMIELGLAPDCI 671
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ ++ + I+ +A +LN M + P+ YN LI C+ +KA
Sbjct: 672 TYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 724
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ G +AF++ QM+ +G S +VTC ++ GL G+ +E
Sbjct: 393 SYATIINSLFKSGRVMEAFNLQSQMVVRG--------ISFDIVTCTTVMDGLFKVGKTKE 444
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP-LS 122
A E+ + ++ L P+ V+++A++ G+ ++G++ A + +M++ N++ ++
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 123 GDVYWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G ++ K +L E + Y LI+ Y GE A E+
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
+VI+D+L++ L + R EA+ +++ + + + + L
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMY-----------------SKGIDPDIVNYASL 607
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
+ G+ + A S++ M N + D YN LI R D Y
Sbjct: 608 IDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 48/213 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFG---- 59
Y L+ YC KA + QM FV +P++ T N L+ GL G
Sbjct: 812 TYNALIRGYCTGSHVEKALKTYSQM--------FVDGIAPNITTYNTLLGGLSNAGLMEE 863
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ 119
EE +++ M E GL P+ ++ +VSG+ R+G +K L +EM
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMIT----------- 912
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
+G + Y LI+ Y G++++A+ LL++L G + S YD+
Sbjct: 913 -------------KGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDI 959
Query: 180 LISG---------LD---KKARTQEAKKMLLSL 200
L G +D K++ E KK+L+ +
Sbjct: 960 LTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEM 992
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 32/183 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+G C G KA D+M+ V EF P+ +T L+ +A
Sbjct: 705 AVTYNILIGGLCKTGAVEKAESALDEML--------VMEFVPTPITHKFLVKAYSRSEKA 756
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ L+I + GL + +++ F R+G RKA K+ +DEM+
Sbjct: 757 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKA---KVVLDEMV----------- 802
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
K+G D V Y +LI YC V KA ++ G Y+ L+
Sbjct: 803 ----------KRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 852
Query: 182 SGL 184
GL
Sbjct: 853 GGL 855
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 72/165 (43%), Gaps = 32/165 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C KG + F + +M+ +G D +T CN L+ G G +
Sbjct: 164 TYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT--------CNILVKGYCRIGLVQY 215
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ + + G+ D + ++ G+ G + +A E+++++
Sbjct: 216 AEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQA-------TELIENS---------- 258
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
W + +D V Y +L+ A+C G++ +A++L +E+ F
Sbjct: 259 ---W----RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 121/308 (39%), Gaps = 68/308 (22%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
Y + L+ +C G+ KA + M +PD V+
Sbjct: 130 YNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKE 189
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
E P+ VT +ALI G G EE +L M +MGL D ++A++SGF G+
Sbjct: 190 MKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGD 249
Query: 96 LRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEV 155
+ + +L +EM++ N + P + V Y+ L+NA C +
Sbjct: 250 IERGKEL---FNEMLRKN----VTP-----------------NVVTYSCLMNALCKKQKW 285
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFD 215
+A +LD +T V Y VL GL K R +A K+L +V +T++
Sbjct: 286 KEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR--GEEPNNVTYN 343
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
+I L K R+ D A +L TM KPD Y+ L+ C
Sbjct: 344 AIING-----------LCKEGRVDD----ALGILETMAKKGKKPDVVTYSTLVKGLCGVG 388
Query: 276 NGDKAYDM 283
D+A D+
Sbjct: 389 KIDEAVDL 396
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L G S A + D M+ +G P+ VT NA+I+GL GR ++
Sbjct: 306 AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTY--------NAIINGLCKEGRVDD 357
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-LKLEMDEMMQSNN-----MLA 117
AL IL M + G PD V+++ +V G +G++ +A D L L M + L
Sbjct: 358 ALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLV 417
Query: 118 IQPL--------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
IQ L + VY++++ ++G + V Y LI+ Y + G++ KA L + G
Sbjct: 418 IQELCKQRRLRHAKRVYYTMV-ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
+ Y VLI+GL K +LS+ L + T T+ E N SL
Sbjct: 477 ISPNAATYTVLINGL--------CKMQMLSIAKGLFNKKRASGTRPTVSE--YNTLMASL 526
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
R +E +A ++ M + N PD +N +I
Sbjct: 527 C------RESSVE-QARNLFQEMRNANHDPDVVSFNIII 558
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 140/339 (41%), Gaps = 67/339 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
Y L+ +C + +A + ++M KG LPD VT S
Sbjct: 221 VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDM 280
Query: 43 ----------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFR 92
P++VT N ++ G G EEA ++ M + G F S+ + G R
Sbjct: 281 QMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLR 340
Query: 93 IGELRKA----------------YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
G+L + Y + MD + +++ ML + L LM G
Sbjct: 341 NGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRL-----MDLMVSNGVY 395
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D V YT+L++ YC+ G+V +AK +L+E+ G + + L++ L K+ R EA++M
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEM 455
Query: 197 LLSL---VYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVK-----GFRIRDLENEAAS 247
L + Y L T+T + ++ C N E E+V G EN A
Sbjct: 456 LQKMNEKSYQL-----DTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAG 510
Query: 248 VLNTMLHWN-DKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
++N++ + + + PD Y LI C+ ++A ++
Sbjct: 511 LVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFI 549
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 85/302 (28%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC KG+ +A + ++MI KG P+ TCN L++ L GR E
Sbjct: 400 TYTTLLHGYCSKGKVFEAKAILNEMIRKGC--------HPNTYTCNTLLNSLWKEGRKSE 451
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQ--SNNMLAIQPL 121
A E+L+ M E DTV+ VV+G R GEL KA ++ + EM +N++ P+
Sbjct: 452 AEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEV---VSEMWTDGTNSLGKENPV 508
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+G L++ ++ S T+ DV + Y LI
Sbjct: 509 AG------------LVNSIHNVS---------------------TNVPDV---ITYTTLI 532
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIR 239
+GL K + +EAKK + + + + P ++T+DT + N C + +S + ++K
Sbjct: 533 NGLCKVGKLEEAKKKFIEM---MAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK----- 584
Query: 240 DLENEAAS------------------------VLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
D+E S +++ M PD YN +I +C C+
Sbjct: 585 DMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMI--NCLCE 642
Query: 276 NG 277
G
Sbjct: 643 GG 644
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C +G+ S A + M G S +L T N+LI GLG G+ E ++ M
Sbjct: 570 FCKQGKISSALRVLKDMERNGC--------SKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPL------SG- 123
E G+ PD ++ +++ G+ + A L EM D+ + S N+ + + L SG
Sbjct: 622 RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGD 681
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
DV S+ G + L Y+ + N A G++ AK L + + ++
Sbjct: 682 FKVACELFDVALSVCGHKEAL-----YSLMFNELLAGGKLSDAKELFEASLERSLLSKNF 736
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLV 201
+Y+ LI L K R +A +L L+
Sbjct: 737 MYEDLIDKLCKDGRLDDAHGLLQKLI 762
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 126/322 (39%), Gaps = 87/322 (27%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C+ A + D+M KG P+ T L+ G GR
Sbjct: 151 TYTFNLLIQSLCESNALDHARELFDKMSEKGC--------QPNKFTVGILVRGFCRAGRT 202
Query: 62 EEALEILRG---------------------------------MPEMGLFPDTVSFTAVVS 88
++ALE + G M E GL PD V+F + +S
Sbjct: 203 KQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRIS 262
Query: 89 GFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK---QGGLLDEV----- 140
R G++ +A + + MQ + L + P V ++LM K Q G+++E
Sbjct: 263 ALCRAGKVFEASRIFRD----MQMDGELGL-PKPNVVTFNLMLKGFCQEGMMEEARSLVE 317
Query: 141 ------------NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKA 188
+Y + + +G++++ +++LDE+ G Y++++ GL +
Sbjct: 318 TMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377
Query: 189 RTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAA 246
+A++++ +V + +P T+T+ TL+ CS + EA
Sbjct: 378 MMLDARRLMDLMVSN---GVYPDTVTYTTLLHGYCSKGKVF----------------EAK 418
Query: 247 SVLNTMLHWNDKPDGAVYNFLI 268
++LN M+ P+ N L+
Sbjct: 419 AILNEMIRKGCHPNTYTCNTLL 440
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 38 VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
V+ P ++T LI+GL G+ EEA + M L PD+V++ V F + G++
Sbjct: 518 VSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKIS 577
Query: 98 KAYDLKLEMD-----EMMQSNNMLAIQPLSGDVYWSLMG------KQGGLLDEVNYTSLI 146
A + +M+ + +Q+ N L + S + + G ++G D Y ++I
Sbjct: 578 SALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMI 637
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDKKA 188
N C G+ A +LL E+ G V +V + +LI K
Sbjct: 638 NCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG 680
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 49/283 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y L+ YC +G+ SKAF + ++M+ G +P++VT N +I GL G
Sbjct: 402 CYSYNTLLDGYCREGKVSKAFMLCEEMLGDG--------ITPTVVTYNTVIKGLVDVGSY 453
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++AL + M E G+ P+ +S ++ FF++G+ +A L
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMML------------------- 494
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
W + +G V + ++I+ C G++++A + D + G + Y L
Sbjct: 495 -----WKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLS 549
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K QEA ++ + ++S +++LI+ F+IR L
Sbjct: 550 DGYCKNGNVQEAFQIKGVMERQAMSASIE--MYNSLIDGL--------------FKIRKL 593
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N+ +L M P+ Y LI C DKA+ +Y
Sbjct: 594 -NDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLY 635
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 54/277 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+G KGE A + DQ++ G +PD + C+ +++ GR + A+E+
Sbjct: 197 LLGKLVQKGEGRVAVMVFDQIVGTGIVPD--------VYMCSIVVNAHCQVGRVDVAMEV 248
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L M + GL P+ V++ +V+G+ G+ +
Sbjct: 249 LEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV------------------------ERVL 284
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD---VRQSVIYDVLISGL 184
LM ++G + V T L+ YC G++ +A+ LL E+ D V +Y VL+ G
Sbjct: 285 RLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE--DELLVVDERVYGVLVDGY 342
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
+ R ++A ++ ++ L + +I N L+KG+ E
Sbjct: 343 CQMGRMEDAVRIRDEMLR-------VGLKVNMVICN----------TLIKGYCKLGQVCE 385
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
A V M+ WN KPD YN L+ +CR KA+
Sbjct: 386 AERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAF 422
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L YC G +AF + M + S S+ N+LI GL + +
Sbjct: 544 TYRTLSDGYCKNGNVQEAFQIKGVMERQAM--------SASIEMYNSLIDGLFKIRKLND 595
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
++L M GL P+ V++ ++SG+ +L KA+ L EM E + N++ +
Sbjct: 596 VTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVS 655
Query: 124 DVYWS-LMGKQGGLLDE-VNYTSL-INAYCADGEVVKAKTL--------LDELTHFGDVR 172
+Y + + +LD+ +++ L ++ C+D V TL LD+ +
Sbjct: 656 SLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLS 715
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVE 231
+++Y++ I GL K + EA+ +L L + P T+ TLI CS +
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEARSVLSVL---MSRGFLPDNFTYCTLIHACSVSG-----N 767
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + F++RD ML P+ +YN LI C+ N D+A ++
Sbjct: 768 VDEAFKLRD----------EMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 67/321 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y ++ D G + A H+ M+ +G P+ ++
Sbjct: 439 TYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
F+ S V N +I GL G+ EA + M E+GL PD +++ + G+ + G +
Sbjct: 499 LGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558
Query: 97 RKAYDLKLEMDEMMQS----------NNMLAIQPLSGDVYWSL--MGKQGGLLDEVNYTS 144
++A+ +K M+ S + + I+ L+ DV L M +G + V Y +
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLN-DVTDLLVEMQTRGLSPNVVTYGT 617
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LI+ +C + ++ KA L E+ G V+ ++S L + R EA +L +
Sbjct: 618 LISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM---- 673
Query: 205 CTSSWPTLTFDTLI--ENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH---WNDKP 259
L FD L CS+ +LVK DL EA + +++ N
Sbjct: 674 -------LDFDILAVHNKCSD-------KLVKN----DLTLEAQKIADSLDKSDICNSLS 715
Query: 260 DGAVYNFLIVEHCRCDNGDKA 280
+ VYN I C+ D+A
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEA 736
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +CD+ + KAFH++ +MI +G F+P++V C+ ++ L R E
Sbjct: 614 TYGTLISGWCDEQKLDKAFHLYFEMIERG--------FTPNVVVCSKIVSSLYRDDRISE 665
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQ--SNNM---LAI 118
A IL M + + + + E +K D L+ ++ SNN+ +AI
Sbjct: 666 ATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIAD-SLDKSDICNSLSNNIVYNIAI 724
Query: 119 QPL--SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L SG + S++ +G L D Y +LI+A G V +A L DE+ G +
Sbjct: 725 DGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLI 784
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSL 200
IY+ LI+GL K A+++ L
Sbjct: 785 PNITIYNALINGLCKLGNIDRAQRLFYKL 813
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ G +AF + D+M+ KG +P+ + NALI+GL G +
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN--------ITIYNALINGLCKLGNID 804
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
A + + + GL P+ V++ ++ + RIG+L KA L+ +M E
Sbjct: 805 RAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 32/157 (20%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G+ +A + ++ +GFLPD T + LIH G +EA ++ M
Sbjct: 728 CKSGKLDEARSVLSVLMSRGFLPDNFTYCT--------LIHACSVSGNVDEAFKLRDEML 779
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
E GL P+ + A+++G ++G + +A L ++ L K
Sbjct: 780 EKGLIPNITIYNALINGLCKLGNIDRAQRL-----------------------FYKLYQK 816
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
G + + V Y LI YC G++ KA L +++T G
Sbjct: 817 -GLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEG 852
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 37/192 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y +++ +C G F A + D+M+ +G + P + T N LI GL GR
Sbjct: 245 VYSYNSMIHGFCSVGRFQAAVKLLDEMVVRG-------KVYPDVYTFNILIDGLCKLGRV 297
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFF---RIGELRKAYDLKLEMDEMMQSNNMLAI 118
EA ++ M + G PD VS+ A+++G+ +GE ++ +D +E
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVE------------- 344
Query: 119 QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
+ L + ++Y +LIN YC V +A LL E+ + V +V Y+
Sbjct: 345 --------------RTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYN 390
Query: 179 VLISGLDKKART 190
L+ GL K R+
Sbjct: 391 CLLDGLSKSGRS 402
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 51/280 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM C KG +A + + + +GF D V +I+GL G+ +A+++
Sbjct: 146 LMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCY--------GTIINGLCKIGKTRDAIQM 197
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
M ++ ++P+ + + V+ G + G + +A L EM E
Sbjct: 198 FPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVE------------------- 238
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDK 186
G LD +Y S+I+ +C+ G A LLDE+ G V V +++LI GL K
Sbjct: 239 -----NGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293
Query: 187 KARTQEAKKMLLSLV----------YHLCTSSW--------PTLTFDTLIENCSNNEFTS 228
R EA ++ ++ Y+ + + FD ++E + S
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVIS 353
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
L+ G+ + +EA +L M + N PD YN L+
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLL 393
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 35/213 (16%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G +A + +M+ G D + + N++IHG GR + A+++L M
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELD--------VYSYNSMIHGFCSVGRFQAAVKLLDEMV 272
Query: 73 EMG-LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G ++PD +F ++ G ++G + +AY N++A+ M
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAY-------------NVVAV-----------MI 308
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
K+G D V+Y +L+N YC G V +AK + D++ + + Y LI+G K
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
EA +L + H T+T++ L++ S +
Sbjct: 369 EAMVLLTEM--HNKNLVPDTVTYNCLLDGLSKS 399
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y LM YC G +A + D+M+ + LP+ ++ + LI+G +E
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCT--------LINGYCKVRMVDE 369
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L M L PDTV++ ++ G + G +DL M Q +++ L
Sbjct: 370 AMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLD 429
Query: 124 DVY-WSLMGKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
D + K L + Y L++ C G + AK + L+ G
Sbjct: 430 DYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQP 489
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
Y+++I GL K+ EA+ +L +V + ++ +TFDT++
Sbjct: 490 NIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNY--ITFDTIVR 534
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C + A ++M +G P++VT N+LI+GL G+ EEA+++
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGL--------KPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
M +GL P+ V++ A+++GF + +++A + ++ + N++ +
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCK 390
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G S M ++G L + Y LI C ++ AK LL+E+ + G V
Sbjct: 391 EGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y++LI GL K +++ A+K LL+ +++L +T++TL++ G+
Sbjct: 451 YNILIDGLCKNDKSRNAEK-LLNEMFNLGLKP-NHVTYNTLMD---------------GY 493
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ A +V M +P+ YN LI +C+ + + A
Sbjct: 494 CMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 38/272 (13%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+L T N I+GL G+ +A + + M G+ P V++ +V G+ + G K Y +
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 104 LEMDEMMQSN---NMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAY 149
M EM+ + N + L + + M KQG + V Y SLIN
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C +G++ +A L D++ G V Y+ LI+G KK +EA K+L + +
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPN- 377
Query: 210 PTLTFDTLIEN-CSNNEF-------TSLVE------------LVKGF-RIRDLENEAASV 248
+TF+T+I+ C +S++E L+ G R +DL+ A +
Sbjct: 378 -VITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQ-AAKEL 435
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
LN M + K D YN LI C+ D A
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 32/190 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ YC +G + F + M+ +G LP+ + T LI GL + A E+
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLEEGILPN--------VSTYKCLIAGLCRKQDLQAAKEL 435
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L M GL D V++ ++ G + + R A L ++EM L ++P
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL---LNEMFN----LGLKP------- 481
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+ V Y +L++ YC +G++ A + + V Y+VLI G K
Sbjct: 482 ----------NHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKI 531
Query: 188 ARTQEAKKML 197
+ + A +L
Sbjct: 532 NKLEAANGLL 541
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C K + A + ++M +KG D +VT N LI GL ++
Sbjct: 415 TYKCLIAGLCRKQDLQAAKELLNEMENKGLKGD--------VVTYNILIDGLCKNDKSRN 466
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L M +GL P+ V++ ++ G+ G+L+ A +++ M++ + N+
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNV-------- 518
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
V Y LI YC ++ A LL+E+ G YD++
Sbjct: 519 ----------------VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 9 MGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEIL 68
M YC +G+ +A + M KG D + T N L +GL R +EA IL
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINAD--------VFTYNILANGLCKLHRYDEAKCIL 450
Query: 69 RGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW- 127
M E G+ P+ V+FT + + + G L +A L +M++ + N++ L D Y
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLI-DAYCK 509
Query: 128 -----------SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
S M +G L D Y+SLI+ C G V +A L +E+ G R
Sbjct: 510 KEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVAT 569
Query: 177 YDVLISGLDKKARTQEAKKM 196
Y +ISGL K+ R EA K+
Sbjct: 570 YTSMISGLSKEGRADEAFKL 589
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 16/128 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC K + +A + +MI+KG LPD L T ++LIHG GR +E
Sbjct: 499 TYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPD--------LYTYSSLIHGECIVGRVDE 550
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL++ M G+ + ++T+++SG + G +A+ L DEMM+ + + P
Sbjct: 551 ALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL---YDEMMK----IGLIP-DD 602
Query: 124 DVYWSLMG 131
V+ SL+G
Sbjct: 603 RVFTSLVG 610
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y +++ G +AF + D+M + +P+ T ALI G+ G+
Sbjct: 322 VYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPN--------AHTYGALIGGVCKAGQM 373
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
E A +L M G+ + V F + G+ R G++ +A L+ M++ + ++ L
Sbjct: 374 EAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNIL 433
Query: 122 S-----------GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ + M ++G + V +T I YC +G + +A+ L ++ G+
Sbjct: 434 ANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGE 493
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKM 196
V + Y+ LI KK + ++A K+
Sbjct: 494 VPNIITYNTLIDAYCKKEKVKQAHKI 519
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE--ALEILRG 70
C +GE KA + D+M+ KG + P++ T N L++ + GR + EIL+
Sbjct: 227 CRRGEVEKAKELMDEMVGKGIV-------KPNVFTYNTLLN--AYVGRKDRKGVDEILKL 277
Query: 71 MPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSL- 129
M + + +++ ++ + G++ +A + +EM + N + + S + WS
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKI---FEEMREKNIEMDVYVYSSMISWSRR 334
Query: 130 ---MGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
M + L DE++ Y +LI C G++ A+ LL E+ G VI
Sbjct: 335 LGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVI 394
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
++ + G ++ + EA + L + + T++ L L K
Sbjct: 395 FNTTMDGYCRRGKMDEA--LRLQAIMEKKGINADVFTYNILANG-----------LCKLH 441
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
R +EA +LN+M+ KP+ + I +C+ N +A ++
Sbjct: 442 RY----DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLF 485
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 82/303 (27%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + ++A+ ++ +MI K SP++VT ++LI+G G+ ++A
Sbjct: 197 YNTIIDSLCKEKLVTEAYELYSEMITK--------TISPTVVTFSSLIYGFCIVGQFKDA 248
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M + P+ +F +V + G++++A N+LA
Sbjct: 249 FRLFNEMVLKNINPNVYTFNILVDALCKEGKMKEA-------------KNVLA------- 288
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG D V +TSL++ YC EV KAK L + + G + Y V+I+GL
Sbjct: 289 ----MMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGL 344
Query: 185 DKKARTQEA---------KKML------LSLVYHLCTS-----SWPTL------------ 212
K EA KK++ SL+ LC S +W L
Sbjct: 345 CKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANV 404
Query: 213 -TFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
TF +L+ C N +ELVK + RD++ P+ YN LI
Sbjct: 405 ITFSSLLHALCKNRHVDKAIELVKKLKDRDIQ----------------PNMYTYNILIDG 448
Query: 271 HCR 273
C+
Sbjct: 449 LCK 451
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC E + AF + +++ GF PD +VT LI G+ G+ +EAL +
Sbjct: 99 YCHLSEMNFAFSLLGKILKVGFHPD--------IVTLTTLIKGMCLNGKVKEALHFHDHV 150
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDL------KLEMDEMMQSNNM---LAIQPLS 122
+G D VS+ +++G +IGE R A + KL +++ N + L + L
Sbjct: 151 ISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLV 210
Query: 123 GDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDV 179
+ Y +S M + V ++SLI +C G+ A L +E+ ++ +V +++
Sbjct: 211 TEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMV-LKNINPNVYTFNI 269
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
L+ L K+ + +EAK +L +V T T L+ G+ +
Sbjct: 270 LVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHT-----------------SLMDGYCLV 312
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ N+A ++ NTM+ P+ Y+ +I C+ D+A D +
Sbjct: 313 NEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFF 357
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 18/228 (7%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C KG+ +A H HD+++ GF+ D +FS LI+ L G + ALE+
Sbjct: 51 LIKGLCLKGDIHQALHFHDKLVAIGFMLD---QFSYG-----TLINDLCKAGETKAALEL 102
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
LR + + PD V + A++ + + A+DL +M S ++L L D +
Sbjct: 103 LRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISD--F 160
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
++G + V Y SL++ YC EV KAK++ + + G Y++LI+G K
Sbjct: 161 CIVGFKPNF---VTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKI 217
Query: 188 ARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELV 233
+ EA + + H C P +T+++LI+ C + + + ++LV
Sbjct: 218 KKVDEAINLFEEM--H-CRKLIPDVVTYNSLIDGLCKSGKISYALKLV 262
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 34/250 (13%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P LV CN L + G + +L + +MG PDT++ ++ G G++ +A
Sbjct: 6 IKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQAL 65
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ ++AI G +LD+ +Y +LIN C GE A
Sbjct: 66 HF---------HDKLVAI---------------GFMLDQFSYGTLINDLCKAGETKAALE 101
Query: 161 LLDELTHFGDVRQS--VIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
LL + G + Q V Y +I + K A + +V S LT++ LI
Sbjct: 102 LLRRVD--GKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSK--RISPDILTYNALI 157
Query: 219 ENCS----NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
+ F + L+ G+ + N+A S+ NTM P YN LI C+
Sbjct: 158 SDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKI 217
Query: 275 DNGDKAYDMY 284
D+A +++
Sbjct: 218 KKVDEAINLF 227
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 35/176 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT-----------EFSPSLVTCNALIH 53
Y+ ++ C + AF ++ +M+ K PD +T F P+ VT N+L+
Sbjct: 118 YIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMD 177
Query: 54 GLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN 113
G +A I M + G+ P S+ +++GF +I ++ +A +L EM
Sbjct: 178 GYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMH------ 231
Query: 114 NMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ L DV V Y SLI+ C G++ A L+DE+ G
Sbjct: 232 ----CRKLIPDV--------------VTYNSLIDGLCKSGKISYALKLVDEMHDRG 269
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C + A ++M +G P++VT N+LI+GL G+ EEA+++
Sbjct: 145 LIDGFCKDENVAAAKKAFEEMQKQGL--------KPNIVTYNSLINGLCNNGKLEEAIDL 196
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
M +GL P+ V++ A+++GF + +++A + ++ + N++ +
Sbjct: 197 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 256
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G S M +G L + Y LI C ++ AK LL+E+ + G V
Sbjct: 257 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 316
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y++LI GL K +++ A+K LL+ +++L +T++TL++ G+
Sbjct: 317 YNILIDGLCKNDKSRNAEK-LLNEMFNLGLKP-NHVTYNTLMD---------------GY 359
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ A +V M +P+ YN LI +C+
Sbjct: 360 CMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 396
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+L T N I+GL G+ +A + + M G+ P+ V++ +V G+ + G K Y +
Sbjct: 65 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 124
Query: 104 LEMDEMMQSN---NMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAY 149
M EM+ + N + L + + M KQG + V Y SLIN
Sbjct: 125 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 184
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C +G++ +A L D++ G V Y+ LI+G KK +EA K+ + +
Sbjct: 185 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN- 243
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+TF+T+I+ + + E S+ ++ML P+ + YN LI
Sbjct: 244 -VITFNTMID---------------AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 287
Query: 270 EHCR 273
CR
Sbjct: 288 GLCR 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C K + A + ++M +KG D +VT N LI GL ++
Sbjct: 281 TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD--------VVTYNILIDGLCKNDKSRN 332
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L M +GL P+ V++ ++ G+ G+L+ A +++ M++ + N+
Sbjct: 333 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV-------- 384
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
V Y LI YC ++ A LL+E+ G YD++
Sbjct: 385 ----------------VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 425
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G+ +A ++ M+ K + P++VT N+L++G
Sbjct: 279 VYTFSILVDAFCKEGKVKEAKNVFVVMMKK--------DVKPNIVTYNSLMNGYCLVNEV 330
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNM 115
+A I M ++G+ PD S++ ++SGF +I + +A L EM +++ N++
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390
Query: 116 LAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ SG + ++L M +G + + Y SL++A C + V KA LL +L
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
Y++LI+GL K R ++A+K+
Sbjct: 451 QPSVCTYNILINGLCKSGRLKDAQKVF 477
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 130/332 (39%), Gaps = 79/332 (23%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A L+ C KG+ KA H HD+++ G F + V+ LI+GL G+
Sbjct: 139 AITLTTLIKGLCLKGDIHKALHFHDKVLALG--------FQLNQVSYRTLINGLCKVGQT 190
Query: 62 EEALEILRG-----------------------------------MPEMGLFPDTVSFTAV 86
+ ALE+LR M + P V++ +
Sbjct: 191 KAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTL 250
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS---------GDV-----YWSLMGK 132
+ G +G+L+ A L + +M+ N + S G V + +M K
Sbjct: 251 ICGLCIMGQLKDAIGL---LHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ + V Y SL+N YC EV KA+++ + + G Y ++ISG K E
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367
Query: 193 AKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
A K+ + H C +P +T+++LI+ L K RI + A ++
Sbjct: 368 AMKLFEEM--H-CKQIFPDVVTYNSLIDG-----------LCKSGRI----SYALKLIGE 409
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
M P+ YN L+ C+ + DKA ++
Sbjct: 410 MHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 38/289 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + G S +F + ++ KG+ PD +T LI GL G +AL
Sbjct: 110 LINCFSQLGHNSLSFSVFSNILKKGYEPD--------AITLTTLIKGLCLKGDIHKALHF 161
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV-- 125
+ +G + VS+ +++G ++G+ + A ++ +D + +++ + V
Sbjct: 162 HDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCK 221
Query: 126 ---------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV- 175
++S M + V Y +LI C G++ A LL ++ ++ +V
Sbjct: 222 DKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI-LENINPTVY 280
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
+ +L+ K+ + +EAK + F +++ + L+ G
Sbjct: 281 TFSILVDAFCKEGKVKEAKNV-----------------FVVMMKKDVKPNIVTYNSLMNG 323
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + + N+A S+ NTM PD Y+ +I C+ D+A ++
Sbjct: 324 YCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF 372
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A +L+ C KG+ +A H HD++ GF + V+ LI+GL G+
Sbjct: 45 AITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSY--------GTLINGLCKVGQT 96
Query: 62 EEALEILRGM------PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM 115
AL++LR + P++G+ P+ V+++A++SGF + ++ ++ ++ N+
Sbjct: 97 RAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEG--------KVKEAKNV 148
Query: 116 LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
A M K+G + V Y+SL++ YC EV KAK++ + + G
Sbjct: 149 FAA-----------MMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQ 197
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELV 233
Y++LI+G K T A + + H C P +T+++LI+ C + + + ++LV
Sbjct: 198 SYNILINGFCKIKMTDAAMNLFEEM--H-CRKIIPNVVTYNSLIDGLCKSGKISYALKLV 254
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M PD Y+ L+ C+ + DKA
Sbjct: 255 ----------------DEMHDRGQPPDIITYSSLLDALCKNHHVDKA 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 40/237 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y +LM YC E +KA + + M G PD +
Sbjct: 163 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 222
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+ P++VT N+LI GL G+ AL+++ M + G PD +++++++ + +
Sbjct: 223 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHV 282
Query: 97 RKAYDLKLEM-DEMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNYTS 144
KA L ++ D+ +Q N ++G +++ L+ K G ++ YT
Sbjct: 283 DKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVK-GYNINVNTYTV 341
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+I+ +C +G +A +L ++ G + +V Y+++I L K +A+K+LL ++
Sbjct: 342 MIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMI 398
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
++ S + L PLS V + K+G D + TSLI C G++ +A D+L
Sbjct: 16 LINSFSQLGQNPLSFSVLAKIF-KKGYDPDAITLTSLIKGLCLKGQIHQALHFHDKLAAL 74
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLL----SLVYHLCTSSWPTLTFDTLIEN-C-- 221
G V Y LI+GL K +T+ A ++L LV S +T+ LI C
Sbjct: 75 GFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCIL 134
Query: 222 ----------SNNEFTSLVE------------LVKGFRIRDLENEAASVLNTMLHWNDKP 259
+ N F ++++ L+ G+ + N+A S+ N M P
Sbjct: 135 AFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNP 194
Query: 260 DGAVYNFLIVEHCRCDNGDKAYDMY 284
D YN LI C+ D A +++
Sbjct: 195 DIQSYNILINGFCKIKMTDAAMNLF 219
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 114/281 (40%), Gaps = 51/281 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM Y E +KA ++ + + +G +P L + N +I+GL E
Sbjct: 169 TYTSLMDGYFLVKEVNKATYIFNTIAQRGV--------TPELHSYNVMINGLCKNKMVNE 220
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + + M + PDT+S+ +++ G + G + +DL EM Q N+
Sbjct: 221 AANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNV-------- 272
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ Y SL++A C + +V KA LL ++ G Y +L+ G
Sbjct: 273 ----------------ITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDG 316
Query: 184 LDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
L K R +A++ +YH L T +P + + N NEF L
Sbjct: 317 LCKNGRLADARE-----IYHDLLTKGYP---LNVSMYNVMVNEFCK----------EGLF 358
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+EA S+L+ M PD Y LI + DKA +
Sbjct: 359 DEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKL 399
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
+V N L++ G+ A +L + +MG PDTV+ T ++ G R G++ L +
Sbjct: 78 IVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIE---GLLV 134
Query: 105 EMDEMMQSN--NMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+ + +M S + L LSG V M KQG + V YTSL++ Y EV KA +
Sbjct: 135 KPNVVMYSTIIDSLCKDKLSGAV----MIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIF 190
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-C 221
+ + G + Y+V+I+GL K EA + + H + T+++++LI+ C
Sbjct: 191 NTIAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDM--HSRNMTPDTISYNSLIDGLC 248
Query: 222 SNNEFTSLVELV 233
+ + + +L+
Sbjct: 249 KSGSISDVWDLI 260
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 36/284 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C + A ++M +G P++VT N+LI+GL G+ EEA+++
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGL--------KPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
M +GL P+ V++ A+++GF + +++A + ++ + N++ +
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G S M +G L + Y LI C ++ AK LL+E+ + G V
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y++LI GL K +++ A+K LL+ +++L +T++TL++ G+
Sbjct: 451 YNILIDGLCKNDKSRNAEK-LLNEMFNLGLKP-NHVTYNTLMD---------------GY 493
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ A +V M +P+ YN LI +C+ + + A
Sbjct: 494 CMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+L T N I+GL G+ +A + + M G+ P+ V++ +V G+ + G K Y +
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 104 LEMDEMMQSN---NMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAY 149
M EM+ + N + L + + M KQG + V Y SLIN
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C +G++ +A L D++ G V Y+ LI+G KK +EA K+ + +
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPN- 377
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+TF+T+I+ + + E S+ ++ML P+ + YN LI
Sbjct: 378 -VITFNTMID---------------AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421
Query: 270 EHCR 273
CR
Sbjct: 422 GLCR 425
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C K + A + ++M +KG D +VT N LI GL ++
Sbjct: 415 TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD--------VVTYNILIDGLCKNDKSRN 466
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L M +GL P+ V++ ++ G+ G+L+ A +++ M++ + N+
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV-------- 518
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
V Y LI YC ++ A LL+E+ G YD++
Sbjct: 519 ----------------VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 131/325 (40%), Gaps = 83/325 (25%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+ +A H HD M+ EF + VT LI+GL G+ EAL++
Sbjct: 147 LINGMCLNGKIKEALHFHDHML--------AHEFHLNQVTYAKLINGLCKMGKTTEALQL 198
Query: 68 LRG-----------------------------------MPEMGLFPDTVSFTAVVSGFFR 92
LR M + PD V+F +++ GF
Sbjct: 199 LRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCI 258
Query: 93 IGELRKAYDLKLEM----------------DEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
+G+L +A+ L EM D + + N+ + L ++M K+G +
Sbjct: 259 VGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNL-----LAVMMKEGVI 313
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
+ V Y+S+++ YC EV KAK +L +T G + Y+++I+G K EA +
Sbjct: 314 PNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSL 373
Query: 197 LLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHW 255
+ C P T+T+ +LI+ L K RI + A ++ M
Sbjct: 374 FNEM---RCRGISPNTVTYSSLIDG-----------LCKLGRI----SYAWEFVDEMRDN 415
Query: 256 NDKPDGAVYNFLIVEHCRCDNGDKA 280
PD YN LI C+ + DKA
Sbjct: 416 GQPPDICTYNSLIDALCKNHHVDKA 440
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC GE + AF + +++ G P+ +T N LI+G+ G+ +EAL
Sbjct: 112 LINCYCHLGEMTFAFSIFAKILKLGH--------HPTTITFNTLINGMCLNGKIKEALHF 163
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
M + V++ +++G ++G+ +A L ++D + +NN+ L
Sbjct: 164 HDHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCK 223
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV- 175
+ L + Y +S M + D V + SLI +C G++++A L E+ ++ +V
Sbjct: 224 EKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMV-LKNINPNVY 282
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
+++L+ L K+ + AK +L + + +I N + ++ G
Sbjct: 283 TFNILVDALCKEGNLKGAKNLL------------AVMMKEGVIPN-----VVTYSSIMDG 325
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + + N+A VL+T+ PD YN +I C+ ++A+ ++
Sbjct: 326 YCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLF 374
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C +G A ++ M+ +G +P+ +VT ++++ G
Sbjct: 281 VYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPN--------VVTYSSIMDGYCLVNEV 332
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A +L + MG+ PD S+ +++GF +I + +A+ L EM S N + L
Sbjct: 333 NKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSL 392
Query: 122 S------GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G + ++ M G D Y SLI+A C + V KA L+ ++ G
Sbjct: 393 IDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGI 452
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
Y++LI GL K+ R ++A+ +L
Sbjct: 453 QLNMYTYNILIDGLCKQGRLKDAQGLL 479
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++M YC E +KA H+ + G PD + N +I+G E
Sbjct: 318 TYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSY--------NIMINGFCKIKMINE 369
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A + M G+ P+TV++++++ G ++G + A++ EM + Q ++ L
Sbjct: 370 AFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLID 429
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYC-------ADGEVVKAKTLLDEL 165
V + QG L+ Y LI+ C A G + +A+TLL ++
Sbjct: 430 ALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLSKM 489
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G V +V + +I L + + + A+K+L ++
Sbjct: 490 EDNGCVPDAVTCETIIRALFENDKNERAEKLLREMI 525
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 136/337 (40%), Gaps = 56/337 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y NL+ +C KG KA+ M ++ +G P+ VT
Sbjct: 466 SYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQM 525
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+P+ T N +I+GLG GR E + L + G ++++ +++ GFF+ G +
Sbjct: 526 MAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAV 585
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLDEVNYTSL 145
A EM E S +++ L S + +L M +G LD V Y++L
Sbjct: 586 DSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSAL 645
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL----DKKARTQEAKKML---- 197
I+ +C ++ A EL G +V+Y+ +ISG + +A ++M+
Sbjct: 646 IDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705
Query: 198 -------LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV---ELVKGFRIRDLENEAAS 247
S++ L +L D E S + +V L+ G A+
Sbjct: 706 PCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASK 765
Query: 248 VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+L M N P VYN LI + R N +A+ ++
Sbjct: 766 ILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLH 802
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 35/275 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +G F +A + D+M+ G LP +++ +L+ G G
Sbjct: 292 TYTAVIVACVKQGNFVEALRLKDEMVSVG-LP-------MNVIVTRSLMKGYCVLGDVNL 343
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNMLAIQPLS 122
AL++ + E G+ PD V F+ +++G ++G++ KAY+L M M +Q N + L
Sbjct: 344 ALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403
Query: 123 GDVYWSLMGKQGGLLDE---------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
G +L+ GL DE V Y L+ G+V +A L +++ G
Sbjct: 404 GFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
V Y+ LI G KK +A ML S++ + T T L+
Sbjct: 464 LVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL-----------------LI 506
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
GF + A V M+ N P +N +I
Sbjct: 507 DGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C KA + +M +GF +P+LVT N LI+G G +
Sbjct: 418 SYNMLIDCFCKVSLMDKASEVFSEMQLRGF--------TPNLVTFNTLINGHCKDGAIIK 469
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----IQ 119
A E+L + E L PD +F+ ++ G R+ +A++ EM E + N + I+
Sbjct: 470 ARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIR 529
Query: 120 PLS--GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L G+ S+ M ++G D +Y +LI +C +V KAK L D ++ G
Sbjct: 530 SLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNP 589
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
+ Y I+ L + R +EAKKM S+ + C+
Sbjct: 590 DNYTYSAFIAALSESGRLEEAKKMFYSMEANGCS 623
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 108/270 (40%), Gaps = 44/270 (16%)
Query: 19 SKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFP 78
SKAF + + + D +F + C+ +++ L A+E + +R G P
Sbjct: 291 SKAFVLLSEFL------DREEDFCSGKLACDTVLYCLANNSMAKEMVVFIRKALARGYVP 344
Query: 79 DTVSFTAVVSGFFRIGELRKAYDL---------------KLEMDEMMQSNNMLAIQPLSG 123
D+ F +++ + ELR+A ++ L + E + + Q G
Sbjct: 345 DSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDE----QRDEG 400
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D M G + + V+Y LI+ +C + KA + E+ G V ++ LI+G
Sbjct: 401 DQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLING 460
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF-RIRDLE 242
K +A+++L + L+EN + + ++ G R++ E
Sbjct: 461 HCKDGAIIKARELL-----------------EMLLENRLKPDIFTFSCIIDGLCRLKRTE 503
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
EA N M+ W P+ +YN LI C
Sbjct: 504 -EAFECFNEMVEWGVNPNAIIYNILIRSLC 532
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P +T N LIHG+ G +EAL ++R M + GLFP+ ++T ++ GF + +A+ +
Sbjct: 202 PDRITYNVLIHGVCKIGVVDEALRLIRQMKDKGLFPNVFTYTILIDGFCNAKRVDEAFGV 261
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL------------------DEVNYTS 144
M E N I+ L V+ + + +L D V Y
Sbjct: 262 LDMMKESRVCANEATIRTLVHGVFRCVDPSKAFVLLSEFLDREEDFCSGKLACDTVLYCL 321
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
N+ + V K L G V S +++V+++ L K+A +EA
Sbjct: 322 ANNSMAKEMVVFIRKALAR-----GYVPDSSVFNVIMACLVKRAELREA 365
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 86/318 (27%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
P++V N +I + EA ++ M G+ PD V+++A++SGFF +G+L+ A D
Sbjct: 39 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAID 98
Query: 102 LKLEMDEMMQSNNMLAIQP------------------LSGDVYWSLMGKQGGLLDEVNYT 143
L ++M+ N I+P G +++M KQG + V Y
Sbjct: 99 L---FNKMILEN----IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 151
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA----KKM--- 196
SL++ YC +V KA ++ + + G + Y+++I+G K + EA KKM
Sbjct: 152 SLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCK 211
Query: 197 --------LLSLVYHLCTSSWPT------------------LTFDTLIEN-CSNNEFTSL 229
SL+ LC S + +T+ ++++ C N++
Sbjct: 212 NIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 271
Query: 230 VEL---------------------------VKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+ L ++GF ++ L NEA ++L+ M PD
Sbjct: 272 IALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAK 331
Query: 263 VYNFLIVEHCRCDNGDKA 280
Y +I+ + D D A
Sbjct: 332 TYEIIILSLFKKDENDMA 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC + +KA + + M G PD T+ + N +I+G + +E
Sbjct: 149 TYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD--TQ------SYNIMINGFCKIKKVDE 200
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM------------- 110
A+ + + M + P+ V++T+++ G + G++ +Y LKL +DEM
Sbjct: 201 AMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI--SYALKL-VDEMHDRGVPPDIITYSS 257
Query: 111 ---------QSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
Q + +A+ D + + +G LD YT +I +C G +A L
Sbjct: 258 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 317
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
L ++ G + + Y+++I L KK A+K+L ++
Sbjct: 318 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMI 357
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 102/240 (42%), Gaps = 43/240 (17%)
Query: 46 VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE 105
V+ LI+GL G+A AL++LR + + P+ V + ++ ++ + +A+DL
Sbjct: 8 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL--- 64
Query: 106 MDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+S M +G D V Y++LI+ + G++ A L +++
Sbjct: 65 ---------------------YSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 103
Query: 166 THFGDVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+++ V +++L+ G K + +E K + F +++
Sbjct: 104 I-LENIKPDVYTFNILVDGFCKDGKMKEGKTV-----------------FAMMMKQGIKP 145
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ L+ G+ + N+A S+ NTM PD YN +I C+ D+A +++
Sbjct: 146 NVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 205
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 39/273 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ C +G + A + D+M+ GF PD T F+P LV F + +
Sbjct: 142 FTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAAT-FNPVLVES---------FRKED 191
Query: 63 --EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
EA + M + G+ PD +SF++++ F R GEL +A
Sbjct: 192 VWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRAL-------------------- 231
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
Y+ M G + D V YT LIN YC + +V A + +E+ V V Y+ L
Sbjct: 232 ----AYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTL 287
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIR 239
++GL + +A ++ +V + TLT TLI C + T + L + +R
Sbjct: 288 LNGLCRGKMLDDADELFKEMVERGVFPDFYTLT--TLIHGYCKDGNMTKALSLFETITLR 345
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+A + M+ P ++ LI C
Sbjct: 346 SEMEKAKELWRDMISREIFPHYISFSILINGFC 378
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 53/280 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC + S A + ++M+ + + D +VT N L++GL ++A
Sbjct: 249 YTILINGYCRNNDVSGALKVRNEMVERSCVMD--------VVTYNTLLNGLCRGKMLDDA 300
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD------LKLEMDEMMQS-NNMLA 117
E+ + M E G+FPD + T ++ G+ + G + KA L+ EM++ + +M++
Sbjct: 301 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMIS 360
Query: 118 IQPLSGDVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS 174
+ + +S++ GL+ E SLI Y G V KA L+ + G
Sbjct: 361 REIFPHYISFSILINGFCSLGLVSE----SLIKGYLRAGNVSKANDFLNTMVSEGVPPDC 416
Query: 175 VIYDVLIS--------------GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+ Y+ LI+ G + R QEA+ +V H +I+
Sbjct: 417 ITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAE-----MVLH------------KMIDK 459
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPD 260
N + ++ ++ G+ +D EA V + ML PD
Sbjct: 460 GINPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVPD 499
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC GE AF + ++ +G+ P+ +T ++ GL G ++A++ +
Sbjct: 102 YCHLGEMGFAFSVLGIVLKRGY--------QPNNITLTTVMKGLCINGEVQKAMDFHDNV 153
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
G+ D V + +++G +IG A+ L EM+ + N++ +
Sbjct: 154 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELT 213
Query: 122 --SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
+ D+Y ++ G D + YTSLI +C G+ + K L+ E+ + ++V
Sbjct: 214 CKARDLYLKIV-DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 272
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
LI +K + EA+ M F+ +++ + + L+ G +
Sbjct: 273 LIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLISGHCLH 315
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + +T+ PD Y LI+ +C+C D+A ++
Sbjct: 316 GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C KG+ +A M + M+ +G PD +VT N LI G G
Sbjct: 267 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD--------IVTFNTLISGHCLHGNV 318
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA ++ + E G+ PD S+T ++ G+ + + +A L E M+ NM
Sbjct: 319 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE----MRCKNM------ 368
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+LD V Y+SLI+ C G + A L + + G + Y++LI
Sbjct: 369 --------------VLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 414
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSW-PT-LTFDTLIENCSNNEFTSLVELVKGFRIR 239
D + Q+ M + L +C PT LT++ LI K RIR
Sbjct: 415 ---DAFCKIQDI-DMGIELFKLMCGKGLTPTVLTYNILING-----------YCKSKRIR 459
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA ++L+ M N PD YN L C+ A++++
Sbjct: 460 ----EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 500
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 46/251 (18%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
PS++ N +I + A+ +L+ M G+ P + + ++ + +GE+ A+ +
Sbjct: 55 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 114
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
++ K+G + + T+++ C +GEV KA
Sbjct: 115 ------------------------LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 150
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
D + G + V Y LI+GL K R+ +A ++L + + + + ++ +I++
Sbjct: 151 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN--IVIYNMIIDSFC 208
Query: 223 NNEFT--------------------SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+E T + L++GF E ++ M++ N P+
Sbjct: 209 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 268
Query: 263 VYNFLIVEHCR 273
+N LI CR
Sbjct: 269 TFNVLIDAFCR 279
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC GE AF + ++ +G+ P+ +T ++ GL G ++A++ +
Sbjct: 102 YCHLGEMGFAFSVLGIVLKRGY--------QPNNITLTTVMKGLCINGEVQKAMDFHDNV 153
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
G+ D V + +++G +IG A+ L EM+ + N++ +
Sbjct: 154 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELT 213
Query: 122 --SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
+ D+Y ++ G D + YTSLI +C G+ + K L+ E+ + ++V
Sbjct: 214 CKARDLYLKIV-DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 272
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
LI +K + EA+ M F+ +++ + + L+ G +
Sbjct: 273 LIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLISGHCLH 315
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + +T+ PD Y LI+ +C+C D+A ++
Sbjct: 316 GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C KG+ +A M + M+ +G PD +VT N LI G G
Sbjct: 267 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD--------IVTFNTLISGHCLHGNV 318
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA ++ + E G+ PD S+T ++ G+ + + +A L E M+ NM
Sbjct: 319 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE----MRCKNM------ 368
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+LD V Y+SLI+ C G + A L + + G + Y++LI
Sbjct: 369 --------------VLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 414
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSW-PT-LTFDTLIENCSNNEFTSLVELVKGFRIR 239
D + Q+ M + L +C PT LT++ LI K RIR
Sbjct: 415 ---DAFCKIQDI-DMGIELFKLMCGKGLTPTVLTYNILING-----------YCKSKRIR 459
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA ++L+ M N PD YN L C+ A++++
Sbjct: 460 ----EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 500
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 100/251 (39%), Gaps = 46/251 (18%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
PS++ N +I + A+ +L+ M G+ P + + ++ + +GE+ A+ +
Sbjct: 55 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 114
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
++ K+G + + T+++ C +GEV KA
Sbjct: 115 ------------------------LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 150
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
D + G + V Y LI+GL K R+ +A ++L + + + + ++ +I++
Sbjct: 151 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN--IVIYNMIIDSFC 208
Query: 223 NNEFT--------------------SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+E T + L++GF E ++ M++ N P+
Sbjct: 209 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 268
Query: 263 VYNFLIVEHCR 273
+N LI CR
Sbjct: 269 TFNVLIDAFCR 279
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 41/314 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C G +A M D+M+++G+ P++VTC AL+ G G
Sbjct: 260 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGY--------EPNIVTCTALMGGYCLKGNV 311
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNM 115
+ A E+ + E G D ++ + G+ ++G +R A + EM ++ N++
Sbjct: 312 DMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSL 371
Query: 116 LAIQPLSGDV--YWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ +G+V W + M + G D V L++ C + +A L ++L G
Sbjct: 372 IDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGL 431
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
Y +LI G R EA +L + HL +T+ LI+ C + ++
Sbjct: 432 TPDVWSYTILIHGCCTSRRMGEAMNLLRDM--HLKNLVPHIVTYSCLIDGLCRSGRISNA 489
Query: 230 VELVKGFRI-------------------RDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
L+ + + +EA + N M+ +PD Y +I
Sbjct: 490 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDG 549
Query: 271 HCRCDNGDKAYDMY 284
+C+ + D+A +++
Sbjct: 550 YCKSERIDEAINLF 563
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 57/269 (21%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G KA HD++++ G FS + V+ LI+GL GR EA+ +LR +
Sbjct: 123 CVNGGVLKALEFHDEIVNNG--------FSLNEVSYGILINGLCENGRVNEAVNLLRMIE 174
Query: 73 EM------GLF--PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ G F + V ++ V+ R G + + ++ EM
Sbjct: 175 KEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEM------------------ 216
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
MG G +E Y SLI C G+ ++ L+DE+ G ++ VLI GL
Sbjct: 217 -----MG-NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 270
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K EA++M FD ++ + L+ G+ ++ +
Sbjct: 271 CKNGMLVEAREM-----------------FDEMVNRGYEPNIVTCTALMGGYCLKGNVDM 313
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A + + + W K D YN I +C+
Sbjct: 314 ARELFDAIGEWGFKRDVWTYNVFIHGYCK 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 38/223 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y +L+ C GE S A+ + M G PD VT
Sbjct: 367 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 426
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+P + + LIHG R EA+ +LR M L P V+++ ++ G R G +
Sbjct: 427 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 486
Query: 97 RKAYDLKLEM-------DEMMQSNNMLAI---QPLSGDVY-WSLMGKQGGLLDEVNYTSL 145
A+ L EM D + S + A+ Q L V+ ++ M K+G D + YT +
Sbjct: 487 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 546
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKA 188
I+ YC + +A L E+ V V Y +L + + K
Sbjct: 547 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 589
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 119/285 (41%), Gaps = 38/285 (13%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC GE AF + ++ +G + P+ +T ++ GL G ++A++ +
Sbjct: 86 YCHLGEMGFAFSVLGIVLKRG--------YQPNNITLTTVMKGLCINGEVQKAMDFHDNV 137
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
G+ D V + +++G +IG A+ L EM+ + N++ +
Sbjct: 138 AAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELT 197
Query: 122 --SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
+ D+Y ++ G D + YTSLI +C G+ + K L+ E+ + ++V
Sbjct: 198 CKARDLYLKIV-DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNV 256
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
LI +K + EA+ M F+ +++ + + L+ G +
Sbjct: 257 LIDAFCRKGKMIEAQGM-----------------FNLMVKRGQQPDIVTFNTLISGHCLH 299
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + +T+ PD Y LI+ +C+C D+A ++
Sbjct: 300 GNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C KG+ +A M + M+ +G PD +VT N LI G G
Sbjct: 251 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD--------IVTFNTLISGHCLHGNV 302
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA ++ + E G+ PD S+T ++ G+ + + +A L E M+ NM
Sbjct: 303 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE----MRCKNM------ 352
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+LD V Y+SLI+ C G + A L + + G + Y++LI
Sbjct: 353 --------------VLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 398
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSW-PT-LTFDTLIENCSNNEFTSLVELVKGFRIR 239
D + Q+ M + L +C PT LT++ LI K RIR
Sbjct: 399 ---DAFCKIQDI-DMGIELFKLMCGKGLTPTVLTYNILING-----------YCKSKRIR 443
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA ++L+ M N PD YN L C+ A++++
Sbjct: 444 ----EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 484
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 113/279 (40%), Gaps = 48/279 (17%)
Query: 15 KGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEM 74
+GE + ++ + K LP ++E PS++ N +I + A+ +L+ M
Sbjct: 13 RGEGCDVVYCYNNKV-KVCLPQ-ISEPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFK 70
Query: 75 GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQG 134
G+ P + + ++ + +GE+ A+ + ++ K+G
Sbjct: 71 GVTPSIFTLSIWINCYCHLGEMGFAFSV------------------------LGIVLKRG 106
Query: 135 GLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAK 194
+ + T+++ C +GEV KA D + G + V Y LI+GL K R+ +A
Sbjct: 107 YQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF 166
Query: 195 KMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT--------------------SLVELVK 234
++L + + + + ++ +I++ +E T + L++
Sbjct: 167 QLLQEMEGQVVKPN--IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIR 224
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
GF E ++ M++ N P+ +N LI CR
Sbjct: 225 GFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 263
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 86/318 (27%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
P++V N +I + EA ++ M G+ PD V+++A++SGFF +G+L+ A D
Sbjct: 175 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAID 234
Query: 102 LKLEMDEMMQSNNMLAIQP------------------LSGDVYWSLMGKQGGLLDEVNYT 143
L ++M+ N I+P G +++M KQG + V Y
Sbjct: 235 L---FNKMILEN----IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 287
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA----KKM--- 196
SL++ YC +V KA ++ + + G + Y+++I+G K + EA KKM
Sbjct: 288 SLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCK 347
Query: 197 --------LLSLVYHLCTSSWPT------------------LTFDTLIEN-CSNNEFTSL 229
SL+ LC S + +T+ ++++ C N++
Sbjct: 348 NIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 407
Query: 230 VEL---------------------------VKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+ L ++GF ++ L NEA ++L+ M PD
Sbjct: 408 IALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAK 467
Query: 263 VYNFLIVEHCRCDNGDKA 280
Y +I+ + D D A
Sbjct: 468 TYEIIILSLFKKDENDMA 485
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 48/283 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC-----NALIHGLGFFGRAE 62
L+ + G+ +F + ++ KG+ P+ +T + C LI+GL G+A
Sbjct: 101 LINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQAR 160
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
AL++LR + + P+ V + ++ ++ + +A+DL
Sbjct: 161 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL-------------------- 200
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLI 181
+S M +G D V Y++LI+ + G++ A L +++ +++ V +++L+
Sbjct: 201 ----YSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI-LENIKPDVYTFNILV 255
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K + +E K + F +++ + L+ G+ +
Sbjct: 256 DGFCKDGKMKEGKTV-----------------FAMMMKQGIKPNVVTYCSLMDGYCLVKQ 298
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N+A S+ NTM PD YN +I C+ D+A +++
Sbjct: 299 VNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC + +KA + + M G PD T+ + N +I+G + +E
Sbjct: 285 TYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPD--TQ------SYNIMINGFCKIKKVDE 336
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM------------- 110
A+ + + M + P+ V++T+++ G + G++ +Y LKL +DEM
Sbjct: 337 AMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI--SYALKL-VDEMHDRGVPPDIITYSS 393
Query: 111 ---------QSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
Q + +A+ D + + +G LD YT +I +C G +A L
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
L ++ G + + Y+++I L KK A+K+L ++
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMI 493
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A++YV + Y G+ +KA + M +G +P S+ CNA ++ L GR
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP--------SIAACNASLYTLAETGRI 496
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA +I + + GL PD+V++ ++ + + G++ KA L EM +++ I L
Sbjct: 497 SEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSL 556
Query: 122 SGDVY--------WSLMGKQGGLL---DEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+Y W + G+ L V Y L+ +G+++KA L +T G
Sbjct: 557 INTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGC 616
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
++ ++ L+ L K A KM + C LT++T+I
Sbjct: 617 PPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPD--VLTYNTII 662
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 125/314 (39%), Gaps = 53/314 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM +G+ K ++ ++M G P++ T I LG R ++
Sbjct: 237 TYSALMVALGRRGDTRKIMNLLEEMKSIGL--------RPNIYTYTICIRALGRARRIDD 288
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A I + M + G PD +++T ++ G+L KA +L ++M S + + L
Sbjct: 289 AWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMD 348
Query: 122 ----SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
GD+ +W+ M G D V YT LI A C G+V +A +LD +T G
Sbjct: 349 KFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFP 408
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSL---------------VYHLCTSSWPTLTFDTL 217
Y+ +I GL K R EA ++L ++ + + S P DT
Sbjct: 409 NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 218 -----------IENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNF 266
I C+ SL L + RI +EA + N + PD YN
Sbjct: 469 ETMKKRGIMPSIAACN----ASLYTLAETGRI----SEAEDIFNDLHKCGLSPDSVTYNM 520
Query: 267 LIVEHCRCDNGDKA 280
L+ + + DKA
Sbjct: 521 LMKCYSKAGQIDKA 534
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+FSP+ T LI GL GR+E+A++I M + G P++V + +++GF + GE+ A
Sbjct: 896 DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
+L + M K+G D +YT L+ C G + +A
Sbjct: 956 CEL------------------------FKKMVKEGIRPDLKSYTILVECLCITGRIDEAV 991
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
+EL G +V Y+ +I+GL K R EA
Sbjct: 992 QYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 93/242 (38%), Gaps = 38/242 (15%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P+L + N L+ GL E+ALE+ M G P+ ++ ++ + + K YDL
Sbjct: 794 PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853
Query: 103 KLEM----------------DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLI 146
EM +++SNN+ + D+Y+ LM Y LI
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNK----ALDLYYELMSGDFS-PTPCTYGPLI 908
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
+ G +A + +E+ +G SVIY++LI+G K A ++
Sbjct: 909 DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL---------- 958
Query: 207 SSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNF 266
F +++ + S LV+ I +EA + PD YNF
Sbjct: 959 -------FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 267 LI 268
+I
Sbjct: 1012 II 1013
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 70/293 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE----------------------- 40
+ L C KG+ +AF HD+++ GF D ++
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
Query: 41 ----FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V N +I + EA ++ M G+ PD V+++A++SGF +G+L
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+ A DL ++M+ N I+P DVY + L+NA+C DG++
Sbjct: 277 KDAIDL---FNKMILEN----IKP---DVY--------------TFNILVNAFCKDGKMK 312
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDT 216
+ KT+ D + G V Y+ L+ G +AK + F+T
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI-----------------FNT 355
Query: 217 LIENCSNNEFTSLVELVKGF-RIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ + N + S ++ GF +I+ + EA ++ M N PD Y+ LI
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFD-EAMNLFKEMHRKNIIPDVVTYSSLI 407
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA + + M G PD + + + +I+G + +E
Sbjct: 332 TYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD--------IQSYSIMINGFCKIKKFDE 383
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + PD V++++++ G + G R +Y L+L +D+M
Sbjct: 384 AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG--RISYALQL-VDQMHD------------ 428
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G + Y S+++A C +V KA LL + G Y +LI G
Sbjct: 429 ---------RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L + + ++A+K+ F+ L+ N + + +++GF + L N
Sbjct: 480 LCQSGKLEDARKV-----------------FEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L+ M PD Y +I+ + D D A
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 128/330 (38%), Gaps = 73/330 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ + ++G + ++ +M +G P+LV CN LI+ G
Sbjct: 85 AFEFNKILGSLVKSKHYHTVLYLSQKMEFRGI--------KPNLVNCNILINCFCQLGLI 136
Query: 62 EEALEILRGMPEMGLFPDTVSFT-----------------------------------AV 86
A + + +MG PDT++FT +
Sbjct: 137 PFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTL 196
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGG 135
+ G ++GE R A DL +D + N++ + + +S M +G
Sbjct: 197 IHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGI 256
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDKKARTQEAK 194
D V Y++LI+ +C G++ A L +++ +++ V +++L++ K + +E K
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMI-LENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 195 KMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH 254
+ FD +++ F + L+ G+ + N+A S+ NTM
Sbjct: 316 TV-----------------FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD Y+ +I C+ D+A +++
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ +C +F +A ++ +M K +PD +VT ++LI GL GR
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD--------VVTYSSLIDGLSKSGRISY 418
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQ---SNNMLAIQ 119
AL+++ M + G+ P+ ++ +++ + ++ KA L + D+ Q S + I+
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478
Query: 120 PL--------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L + V+ L+ K G LD YT +I +C +G +A LL ++ G +
Sbjct: 479 GLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ Y+++I L KK A+K+L ++
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMI 567
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC E + AF M +++ G+ PD +T N LI GL G+ +EAL
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPD--------TITFNTLIKGLCLNGKVKEALHF 160
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ +G D S+ +++G +IGE R A + ++D + N+ L
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
L D Y +S M + D V +++LI +C G++ +A L E+
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++L+ L K+ + AK ML+ ++ + +T+ +L++ G+
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPN--VVTYSSLMD---------------GY 323
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + N+A VLNT+ P+ Y +I C+ D+A ++
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLF 371
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 38/292 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A+ ++ QMI K + SP +VT +ALI+G G+ EEA
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAK--------KISPDVVTFSALIYGFCIVGQLEEA 262
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-LKLEMDEMMQSNNMLAIQPLSG 123
+ R M + PD +F +V + G L+ A + L + M E + N + + G
Sbjct: 263 FGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322
Query: 124 DVYWSLMGKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ + K +L+ + +Y ++IN +C V +A +L +++ G
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVEL 232
V Y+ LI GL K R A +++ + H T++ LI+ C N+ + L
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEM--HDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VK + + ++ PD +N LI C+ A D++
Sbjct: 441 VKKIKDQGIQ----------------PDMYTFNILIYGLCKVGRLKNAQDVF 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 51/227 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS------------------- 42
A++Y ++ +C +A + + M KG PD VT S
Sbjct: 348 AHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVD 407
Query: 43 --------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
++ T N LI L ++A+ +++ + + G+ PD +F ++ G ++G
Sbjct: 408 EMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L+ A DV+ L+ K G ++ Y ++N C +G
Sbjct: 468 RLKNA-----------------------QDVFQDLLSK-GYSVNAWTYNIMVNGLCKEGL 503
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+A+ LL ++ G + +V Y+ LI L K ++A+K+L ++
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC + +KA H+ + + G P+ + S T +I+G +E
Sbjct: 315 TYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPN-----AHSYCT---MINGFCKIKMVDE 366
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ PD V++ +++ G + G + A++L EM + Q N+
Sbjct: 367 ALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT------ 420
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y LI+A C + V +A L+ ++ G +++LI G
Sbjct: 421 ------------------YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K R + A+ + D L + S N +T + +V G L +
Sbjct: 463 LCKVGRLKNAQDVFQ----------------DLLSKGYSVNAWTYNI-MVNGLCKEGLFD 505
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L+ M PD Y LI D +KA
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC E + AF M +++ G+ PD +T N LI GL G+ +EAL
Sbjct: 109 LINCYCHMAEMNFAFSMMAKILKMGYEPD--------TITFNTLIKGLCLNGKVKEALHF 160
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ +G D S+ +++G +IGE R A + ++D + N+ L
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
L D Y +S M + D V +++LI +C G++ +A L E+
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++L+ L K+ + AK ML+ ++ + +T+ +L++ G+
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPN--VVTYSSLMD---------------GY 323
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + N+A VLNT+ P+ Y +I C+ D+A ++
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLF 371
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 38/292 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A+ ++ QMI K + SP +VT +ALI+G G+ EEA
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAK--------KISPDVVTFSALIYGFCIVGQLEEA 262
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-LKLEMDEMMQSNNMLAIQPLSG 123
+ R M + PD +F +V + G L+ A + L + M E + N + + G
Sbjct: 263 FGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322
Query: 124 DVYWSLMGKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ + K +L+ + +Y ++IN +C V +A +L +++ G
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVEL 232
V Y+ LI GL K R A +++ + H T++ LI+ C N+ + L
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEM--HDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VK + + ++ PD +N LI C+ A D++
Sbjct: 441 VKKIKDQGIQ----------------PDMYTFNILIYGLCKVGRLKNAQDVF 476
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 51/227 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS------------------- 42
A++Y ++ +C +A + + M KG PD VT S
Sbjct: 348 AHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVD 407
Query: 43 --------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
++ T N LI L ++A+ +++ + + G+ PD +F ++ G ++G
Sbjct: 408 EMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVG 467
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L+ A DV+ L+ K G ++ Y ++N C +G
Sbjct: 468 RLKNA-----------------------QDVFQDLLSK-GYSVNAWTYNIMVNGLCKEGL 503
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+A+ LL ++ G + +V Y+ LI L K ++A+K+L ++
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 49/277 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC + +KA H+ + + G P+ + S T +I+G +E
Sbjct: 315 TYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPN-----AHSYCT---MINGFCKIKMVDE 366
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ PD V++ +++ G + G + A++L EM + Q N+
Sbjct: 367 ALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT------ 420
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y LI+A C + V +A L+ ++ G +++LI G
Sbjct: 421 ------------------YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYG 462
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K R + A+ + D L + S N +T + +V G L +
Sbjct: 463 LCKVGRLKNAQDVFQ----------------DLLSKGYSVNAWTYNI-MVNGLCKEGLFD 505
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L+ M PD Y LI D +KA
Sbjct: 506 EAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA 542
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 83/331 (25%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + L+ C KGE KA + HD+++ +GF D V+ LI+GL G
Sbjct: 128 AVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY--------GTLINGLCRVGET 179
Query: 62 EEALEILRGM------PEMGLF-----------------------------PDTVSFTAV 86
+ A+++LR + P + ++ PD V+++++
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSN---NMLAIQPL------SGDV-----YWSLMGK 132
+SGF +G+L+ A DL + M+ N N+ L G V ++M K
Sbjct: 240 ISGFCVVGKLKYAVDL---FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK 296
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ LD V Y SL++ YC +V KAK+L + + G Y ++I+G K E
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDE 356
Query: 193 AKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLN 250
A K+ + H C +P +T+++L++ C + + +ELV
Sbjct: 357 AMKLFEEM--H-CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE--------------- 398
Query: 251 TMLHWNDKPDGAV-YNFLIVEHCRCDNGDKA 280
+H +P + YN ++ C+ ++ DKA
Sbjct: 399 --MHDRGQPSNIITYNSILDAICKNNHVDKA 427
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 111/301 (36%), Gaps = 50/301 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + ++G ++ A + QM G PDF+T CN L++ G
Sbjct: 58 AIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFIT--------CNLLMNCFSQLGHI 109
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ + + + + G PD V+FT ++ G GE+ KA
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL--------------------- 148
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ + QG LD+V+Y +LIN C GE A LL + V+Y +I
Sbjct: 149 ---YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTII 205
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT------------------FDTLIENCSN 223
+ K +A + +V + T + F+ +I + N
Sbjct: 206 DSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNIN 265
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ L+ GF EA +VL M+ N K D YN L+ +C +KA +
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325
Query: 284 Y 284
+
Sbjct: 326 F 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 34/199 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPS-LVTCNALIHGLGFFGRAE 62
Y +L+ C G S A + D+M +G PS ++T N+++ + +
Sbjct: 375 TYNSLVDGLCKSGRTSCALELVDEMHDRG---------QPSNIITYNSILDAICKNNHVD 425
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ +L + E G+ PD ++T +++G ++G L D+ + L ++ S
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRL----------DDAQKVFEDLLVKGYS 475
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
++Y YTSLIN +C G + +L ++ G + ++ Y++LI
Sbjct: 476 PNIY--------------TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521
Query: 183 GLDKKARTQEAKKMLLSLV 201
L +K +A+K+L ++
Sbjct: 522 SLFEKDENDKAEKLLREMI 540
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 134/344 (38%), Gaps = 80/344 (23%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ K SP +VT ++LI G G+ + A
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSK--------RISPDVVTYSSLISGFCVVGKLKYA 252
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN----------- 113
+++ M + P+ +F+ ++ GF + G++R+A ++ + MM+ N
Sbjct: 253 VDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNV---LAVMMKKNVKLDVVTYNSL 309
Query: 114 -----------------NMLAIQPLSGDVY-WSLMGK---QGGLLDE------------- 139
N++A + ++ DV+ +S+M + ++DE
Sbjct: 310 MDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369
Query: 140 ----VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
V Y SL++ C G A L+DE+ G + Y+ ++ + K +A
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429
Query: 196 MLLS---------------LVYHLCT----SSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+L L+ LC + D L++ S N +T L+ GF
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYT-YTSLINGF 488
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ +E ++L+ M P+ Y LI D DKA
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKA 532
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 137/341 (40%), Gaps = 62/341 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
+ Y ++ CD+G+ +A + D+M +PD VT
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375
Query: 40 EFSPSLVTCNALIHGL--GFF---GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
E V N + H + +F G+ +EA ++ M E G PD ++ +++G+ + G
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Query: 95 ELRKAYDLKLEMDEMMQS---------NNMLAIQPLSG---DVYWSLMG--KQGGLLDEV 140
++ +AY + MDEM + N +L L D Y M K+G +LDEV
Sbjct: 436 KMAEAYKM---MDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEV 492
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
Y +LI Y D + +A L +E+ G V + Y+ +I GL +T +A L L
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNEL 552
Query: 201 ---------------VYHLCTSSWPTLTF---DTLIENCSNNEFTSLVELVKGFRIRDLE 242
++ C F + ++E+ + + L++G +
Sbjct: 553 LEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGML 612
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ ++ NT + D YN +I C+ + A+D+
Sbjct: 613 EKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDL 653
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 30/254 (11%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
P++ T N LIHG EEAL ++ M E G PD V++ V++ + +L + D
Sbjct: 208 QPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRD 267
Query: 102 LKLEMDE--MMQSNNMLAIQPLSG--DVYW--------SLMGKQGGLLDEVNYTSLINAY 149
L L+M + + N I + G + W LM +G L D Y +++
Sbjct: 268 LLLQMKNSGLFPNRNTYNIL-VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGL 326
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C +G++ +A L D++ F V V Y+ LI G + + A K++ +
Sbjct: 327 CDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMK-------- 378
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
N T + ++K F +EA++V+ M+ PD YN +I
Sbjct: 379 --------ARGVKENGVTHNI-MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMIN 429
Query: 270 EHCRCDNGDKAYDM 283
+C+ +AY M
Sbjct: 430 GYCKAGKMAEAYKM 443
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
+MG + D+ + +A + ++M G + +++T N +I GL G+ ++A++
Sbjct: 498 IMGYFKDE-QADRALKLWEEMKETGIVA--------TIITYNTIIRGLCLSGKTDQAVDK 548
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
L + E GL PD + ++ G+ G + KA+ +M E ++ L
Sbjct: 549 LNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCR 608
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G ++ +G +D V Y +I+++C + + A L+ E+
Sbjct: 609 EGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYT 668
Query: 177 YDVLISGLDKKARTQEAKKMLLSLV 201
Y+ +++GL K RT+EA+K+ L
Sbjct: 669 YNAIVTGLTKAGRTEEAEKLALKFA 693
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------------E 40
L+G G + A + Q+ KG P T
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P+LVT N +I+G G +AL+ + + G D ++ +++G + G+++ A
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 101 DLKLEMDEMMQSNNMLA----IQPLSGDVY-------WSLMGKQGGLLDEVNYTSLINAY 149
L EM++ N++ I L D + S +G++G LLD V Y SLI+
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C+ G + LL ++ +++LI L K+ R EA+ +L +
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR--GEKP 298
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+T++ L+E G+ R+ +EA + N M+ +PD YN LI
Sbjct: 299 DIVTYNALME---------------GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343
Query: 270 EHCRCDNGDKAYDMY 284
+C+ D+A ++
Sbjct: 344 GYCKTKMVDEAMVLF 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 51/283 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C +G +A + M +G PD +VT NAL+ G
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD--------IVTYNALMEGYCSRENVH 317
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA E+ M + GL PD +++ ++ G+ + + +A L E+ N + I
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL---FKELCNKNLVPTI---- 370
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+Y SLI+ C G + K LLDE+ V Y++LI
Sbjct: 371 -----------------ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDL 241
L K+ R EA L LV + P + T++ +++ G+ +R+
Sbjct: 414 ALCKEGRILEA---LGVLVMMMKKGVKPNIVTYNAMMD---------------GYCLRNN 455
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N A + N M+ +PD YN LI +C+ + D+A ++
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 52/271 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C +G +A + M+ KG P++VT NA++ G
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGV--------KPNIVTYNAMMDGYCLRNNVNV 458
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +I M + GL PD +++ +++G+ + + +A L E M+ N++
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE----MRHKNLIP------ 508
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D +Y SLI+ C G + + LLDE+ G + Y++L
Sbjct: 509 --------------DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL--- 551
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
LD +TQ K +SL + WP T +++N L KG +++
Sbjct: 552 LDAFCKTQPFDKA-ISLFRQIVEGIWPDFYTNHAIVDN-----------LCKGEKLK--- 596
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A L +L P+ Y LI C+
Sbjct: 597 -MAEDALKHLLMHGCSPNVQTYTILINALCK 626
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC +A + +M HK +PD + + N+LI GL GR
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD--------IASYNSLIDGLCNLGRIPHV 529
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM----QSNNMLAIQP 120
E+L M + G PD +++ ++ F + KA L ++ E + +N+ +
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Query: 121 LSG-------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
G D L+ G + YT LINA C DG +A LL ++
Sbjct: 590 CKGEKLKMAEDALKHLL-MHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 174 SVIYDVLISGLDKKARTQEAKKM 196
++ ++++I L ++ T +A+K+
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKL 671
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+G YC E +A + M+ K LP S+VT N+LIHG ++
Sbjct: 319 TYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLP--------SVVTYNSLIHGWCKVKDVDK 370
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A+ +L M GL+PD V++T +VSGF +G+ A +L M + +L +
Sbjct: 371 AMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLD 430
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + + + LD V Y +I+ C DG++ A+ +L L G
Sbjct: 431 GLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRF 490
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
S ++++I GL +K +A+ +L+ + + C
Sbjct: 491 DSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGC 523
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 43/314 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +M +C G S+A + +M KG SLVT N LI G+ G ++
Sbjct: 214 VYNAIMDGFCKGGFVSEALSLFAEMNEKGV--------KGSLVTYNCLIQGVCSIGEWKK 265
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L M E G+ PD +FT +V GF + G + +A + M +M N++ L G
Sbjct: 266 AYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIG 325
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ LM + L V Y SLI+ +C +V KA LL+E+ + G
Sbjct: 326 GYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYP 385
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIENCSNNEFTSLV 230
V + L+SG + + AK++ ++ + + T + D LI+ + F +++
Sbjct: 386 DVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIK--CHFRFEAML 443
Query: 231 ELVKGFRIRDLE-------------------NEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
L + DL+ N+A VL +L + D +N +I
Sbjct: 444 -LFRALEESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGL 502
Query: 272 CRCDNGDKAYDMYM 285
CR D A D+ M
Sbjct: 503 CRKGLLDDAEDLLM 516
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G AF + QM F T P++VT N +++GL G A+ + R M
Sbjct: 118 CHLGHTKFAFSVLSQM--------FKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREME 169
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVY 126
G P+ +F A+V+G +IG++ A +M E N++ + G V
Sbjct: 170 NAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVS 229
Query: 127 WSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+L M ++G V Y LI C+ GE KA LL+E+ G + + +L+
Sbjct: 230 EALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILV 289
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K+ EAK ++ +V + +T+++LI G+ + +
Sbjct: 290 DGFCKEGLILEAKSVISFMVQMGVEPN--VVTYNSLI---------------GGYCLMNE 332
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+EA V M+ P YN LI C+ + DKA
Sbjct: 333 IDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKA 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 49/283 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C G+ A M+ + + P++V NA++ G G
Sbjct: 177 GYTFGALVNGLCKIGDMVSAVGCIRDMVER--------NYEPNVVVYNAIMDGFCKGGFV 228
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EAL + M E G+ V++ ++ G IGE +KAY L ++EMM+
Sbjct: 229 SEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFL---LNEMME---------- 275
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+G + D +T L++ +C +G +++AK+++ + G V Y+ LI
Sbjct: 276 -----------KGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLI 324
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G EA K+ +V C S +T+++LI +++D+
Sbjct: 325 GGYCLMNEIDEAIKVFRLMVLKKCLPS--VVTYNSLIHGWC--------------KVKDV 368
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ +A +LN M++ PD + L+ C A +++
Sbjct: 369 D-KAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELF 410
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 28/249 (11%)
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
T N +I+ L G + A +L M + GL P V+ +V+G G + +A L EM
Sbjct: 109 TLNIVINCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREM 168
Query: 107 DEMMQSNNMLAIQPLS------GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEV 155
+ N L GD+ ++ M ++ + V Y ++++ +C G V
Sbjct: 169 ENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFV 228
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFD 215
+A +L E+ G V Y+ LI G+ ++A +L +
Sbjct: 229 SEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLL-----------------N 271
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
++E + + LV GF L EA SV++ M+ +P+ YN LI +C +
Sbjct: 272 EMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMN 331
Query: 276 NGDKAYDMY 284
D+A ++
Sbjct: 332 EIDEAIKVF 340
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------------E 40
L+G G + A + Q+ KG P T
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P+LVT N +I+G G +AL+ + + G D ++ +++G + G+++ A
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 101 DLKLEMDEMMQSNNMLA----IQPLSGDVY-------WSLMGKQGGLLDEVNYTSLINAY 149
L EM++ N++ I L D + S +G++G LLD V Y SLI+
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C+ G + LL ++ +++LI L K+ R EA+ +L +
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR--GEKP 298
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+T++ L+E G+ R+ +EA + N M+ +PD YN LI
Sbjct: 299 DIVTYNALME---------------GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343
Query: 270 EHCRCDNGDKAYDMY 284
+C+ D+A ++
Sbjct: 344 GYCKTKMVDEAMVLF 358
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 51/283 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C +G +A + M +G PD +VT NAL+ G
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD--------IVTYNALMEGYCSRENVH 317
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA E+ M + GL PD +++ ++ G+ + + +A L E+ N + I
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL---FKELCNKNLVPTI---- 370
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+Y SLI+ C G + K LLDE+ V Y++LI
Sbjct: 371 -----------------ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDL 241
L K+ R EA L LV + P + T++ +++ G+ +R+
Sbjct: 414 ALCKEGRILEA---LGVLVMMMKKGVKPNIVTYNAMMD---------------GYCLRNN 455
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N A + N M+ +PD YN LI +C+ + D+A ++
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLF 498
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 52/271 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C +G +A + M+ KG P++VT NA++ G
Sbjct: 407 TYNILIDALCKEGRILEALGVLVMMMKKGV--------KPNIVTYNAMMDGYCLRNNVNV 458
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +I M + GL PD +++ +++G+ + + +A L E M+ N++
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKE----MRHKNLIP------ 508
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D +Y SLI+ C G + + LLDE+ G + Y++L
Sbjct: 509 --------------DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNIL--- 551
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
LD +TQ K +SL + WP T +++N L KG +++ E
Sbjct: 552 LDAFCKTQPFDKA-ISLFRQIVEGIWPDFYTNHAIVDN-----------LCKGEKLKMAE 599
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ L +L P+ Y LI C+
Sbjct: 600 D----ALKHLLMHGCSPNVQTYTILINALCK 626
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC +A + +M HK +PD + + N+LI GL GR
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD--------IASYNSLIDGLCNLGRIPHV 529
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM----QSNNMLAIQP 120
E+L M + G PD +++ ++ F + KA L ++ E + +N+ +
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Query: 121 LSG-------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
G D L+ G + YT LINA C DG +A LL ++
Sbjct: 590 CKGEKLKMAEDALKHLL-MHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 174 SVIYDVLISGLDKKARTQEAKKM 196
++ ++++I L ++ T +A+K+
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKL 671
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 124/315 (39%), Gaps = 55/315 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE----------------------- 40
Y NL+ +C G+ A + +MI + P+ T
Sbjct: 242 TYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVL 301
Query: 41 ----FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++VT N+LI G + +A IL M + G+ D S++ +++GF +I +
Sbjct: 302 MKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMV 361
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL------SGDV--YWSL---MGKQGGLLDEVNYTSL 145
+A DL EM + + L SG + W L M +G + + Y SL
Sbjct: 362 DEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSL 421
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
+NA C + V KA LL + G Y +LI GL R ++A+
Sbjct: 422 LNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQ----------- 470
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
+ F L+ N + + +++GF L +EA ++L+ M P+ Y
Sbjct: 471 ------VVFQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYE 524
Query: 266 FLIVEHCRCDNGDKA 280
+I+ + D D A
Sbjct: 525 IIILSLFKKDENDMA 539
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 40/290 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G+ +F + +++ G+ P+++ +I GL G EAL
Sbjct: 106 LINCFCHLGQNPLSFSVFAKILKMGY--------EPNVIILTTIIKGLCLKGEVREALHF 157
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSG--- 123
+ G + VS+ A+++G ++GE R A +L +D +++Q N ++ + G
Sbjct: 158 HDKVVAQGFQLNQVSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCK 217
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
++Y ++ K+ D V Y +LI+ +C G++ A LL ++ ++ +V
Sbjct: 218 DKLVNDAFNLYSEMIAKR-IFPDVVTYNNLISGFCVVGQLKDAIGLLHKMI-LENINPNV 275
Query: 176 -IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
+L+ K + +EAK ++ L++N + L+
Sbjct: 276 YTMSILVDAFCKDGKPKEAKAVV-----------------AVLMKNGVKPNVVTYNSLID 318
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
G+ + N+A +LNTM D Y+ +I C+ D+A D++
Sbjct: 319 GYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLF 368
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 56/245 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ YC + +KA + + M +G + D V +S +I+G +E
Sbjct: 312 TYNSLIDGYCLVKQVNKAEVILNTMAQRGVIAD-VQSYS-------IMINGFCKIKMVDE 363
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML------- 116
A+++ + M L PDT+++++++ G + G + A++L EM + Q N++
Sbjct: 364 AIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLN 423
Query: 117 ---------------------AIQP-------------LSGD------VYWSLMGKQGGL 136
IQP +SG V+ L+ K G
Sbjct: 424 ALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIK-GYN 482
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
LD YT++I +C +G +A LL ++ G + + Y+++I L KK A+K+
Sbjct: 483 LDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKKDENDMAEKL 542
Query: 197 LLSLV 201
L ++
Sbjct: 543 LREMI 547
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSP-------------------- 43
AY ++ +C G+ KA+ + ++M KG P VT S
Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683
Query: 44 -------SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
++V ++LI G G GR +EA IL + + GL P++ ++ ++ + E+
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEI 743
Query: 97 RKAY-------DLKLEMDEMMQS---NNMLAIQPLSGD-VYWSLMGKQGGLLDEVNYTSL 145
+A +LK + M S N + I+ + V+W M KQG + + YT++
Sbjct: 744 DEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTM 803
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
I G V++A+ L D G V S Y+ +I GL + +A
Sbjct: 804 IAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDA 851
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 104/266 (39%), Gaps = 49/266 (18%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
GE K + +++ +G +PD V +S LIHGL G + E ++ M E G
Sbjct: 566 GEVEKGRALFEEIKAQGLVPD-VRSYS-------ILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
L D +++ V+ GF + G++ KAY L EM +QP
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK-------GLQPTV------------- 657
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
V Y S+++ + +A L +E G VIY LI G K R EA
Sbjct: 658 ----VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYL 713
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHW 255
+L L+ LT ++ NC L LVK I +EA M +
Sbjct: 714 ILEELM-------QKGLTPNSYTWNC------LLDALVKAEEI----DEAQVCFQNMKNL 756
Query: 256 NDKPDGAVYNFLIVEHCRCDNGDKAY 281
P+ Y+ +I C +KA+
Sbjct: 757 KCSPNAMTYSIMINGLCMIRKFNKAF 782
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 103/280 (36%), Gaps = 50/280 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+G C +A + +++ + P + N +I G G G+ +EA
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELD--------LNRSVPCVYAYNTMIMGYGSAGKFDEA 362
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+L G P +++ +++ R G++ +A + EM
Sbjct: 363 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM------------------ 404
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+Q + Y LI+ C GE+ A + D + G + +++I L
Sbjct: 405 -------RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRL 457
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K + EA + L L + +C+ T CS L+ G R ++
Sbjct: 458 CKAQKLDEACSIFLGLDHKVCSPDSRTF--------CS---------LIDGLGRRGRVDD 500
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A S+ ML + P+ VY LI +C + + +Y
Sbjct: 501 AYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 118/316 (37%), Gaps = 81/316 (25%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
YAY ++ Y G+F +A+ + ++ KG +P +
Sbjct: 344 YAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE 403
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLF------------------- 77
+ +P+L T N LI L G E AL++ M E GLF
Sbjct: 404 MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463
Query: 78 ----------------PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
PD+ +F +++ G R G + AY L +M + Q N++ L
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G + M +G D + S ++ GEV K + L +E+ G
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIEN-CSNNEF 226
V Y +LI GL K ++E K+ + HL L ++T+I+ C + +
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHL-----DVLAYNTVIDGFCKSGKV 638
Query: 227 TSLVELVKGFRIRDLE 242
+L++ + + L+
Sbjct: 639 DKAYQLLEEMKTKGLQ 654
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+F P+ LI L R + L + M E+G + FT +V F R G + A
Sbjct: 198 KFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAA 257
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSG------------DVYWSL---MGKQGGLLDEVNYTS 144
L +DEM +SN+ A L D+ W M QG + D+V YT+
Sbjct: 258 LSL---LDEM-KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LI C + +A L +EL V Y+ +I G + EA +L
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 205 CTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
C S + NC ++ + RI D + A+ P+ Y
Sbjct: 374 CIPS-------VIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-----------PNLTTY 415
Query: 265 NFLIVEHCR 273
N LI C+
Sbjct: 416 NILIDMLCK 424
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 43/299 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +L+ +C G+ + F + ++M+ K PD + T N L+ L G+
Sbjct: 233 VFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPD--------VYTFNTLVDALFKEGKV 284
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP- 120
+EA ++ M + G+ P+ V+++ ++ G+ + E+ KA D+ + MMQ IQ
Sbjct: 285 KEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDI---FNSMMQRGMTPDIQSY 341
Query: 121 ---LSGDVYWSLMGKQGGL----------LDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
++G ++ + L LD + Y+SLIN C G ++ A L DE+
Sbjct: 342 TIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLD 401
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLS---------------LVYHLCTSSW--- 209
G + Y+ L+ L K +T +A +L L+ LC
Sbjct: 402 RGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDD 461
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
F L+ N + + ++ G L +EA ++L+ M PD Y +I
Sbjct: 462 AQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIII 520
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 51/277 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +MI K SP + T +LIHG G+ +E
Sbjct: 201 YSIIIDNLCKDKHVNDAFDLYSEMIRK--------RISPDVFTYTSLIHGFCIVGQLKEV 252
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+L M + PD +F +V F+ G++++A L
Sbjct: 253 FVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCL---------------------- 290
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M K+G + V Y+ L++ YC EV KAK + + + G Y ++I+GL
Sbjct: 291 --IAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGL 348
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLEN 243
K EA + + H + +T+ +LI C + S
Sbjct: 349 CKMKMLDEAVSLFEEM--HSTNMTLDVITYSSLINGLCKSGRLIS--------------- 391
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
A + + ML PD YN L+ C+ DKA
Sbjct: 392 -AWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKA 427
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ C G A+ + D+M+ +G PD ++T N+L+ L + ++
Sbjct: 375 TYSSLINGLCKSGRLISAWKLFDEMLDRGQPPD--------VITYNSLLDALCKSHQTDK 426
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L M + G+ D ++ ++ G + G L A K+ D +++S N
Sbjct: 427 AIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQ--KIFRDLLIKSYN--------- 475
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+D V Y +IN C + + +A TLL ++ G + ++ Y+++I
Sbjct: 476 -------------VDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIIIRA 522
Query: 184 LDKKARTQEAKKMLLSLV 201
L K +A+K+L ++
Sbjct: 523 LFGKGVNDKAEKLLREMI 540
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 29/254 (11%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P ++ N LI GL +EAL + G VS+ +++G ++G+ + A L
Sbjct: 125 PDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQL 184
Query: 103 --KLEMDEMMQSNNM---LAIQPLSGDVY-------WSLMGKQGGLLDEVNYTSLINAYC 150
++E + + + + + I L D + +S M ++ D YTSLI+ +C
Sbjct: 185 LRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFC 244
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP 210
G++ + LL+E+ ++ L+ L K+ + +EAK ++ ++
Sbjct: 245 IVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMK-------- 296
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
E N T V L+ G+ + + N+A + N+M+ PD Y +I
Sbjct: 297 --------EGVEPNIVTYSV-LMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMING 347
Query: 271 HCRCDNGDKAYDMY 284
C+ D+A ++
Sbjct: 348 LCKMKMLDEAVSLF 361
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 29/256 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P++ +CNA + + + R E + R M + P+ + VVS + ++GEL KA
Sbjct: 181 FFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKAS 240
Query: 101 DLKLEMDEMMQSNNMLAIQPL-SG-----------DVYWSLMGKQGGLLDEVNYTSLINA 148
++ +M +M N++ L SG V +MGK G + V + +LIN
Sbjct: 241 EVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLING 300
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
+C +G++ +A + E+ V Y+ LI+G + ++ M + L
Sbjct: 301 FCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSE----MGIGL-------- 348
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
F+ + N + + L+ G +AA ++ + N P+ + ++ LI
Sbjct: 349 -----FEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Query: 269 VEHCRCDNGDKAYDMY 284
C +N ++A+ +Y
Sbjct: 404 AGQCVRNNSERAFLVY 419
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGL---GFF 58
Y ++ YC GE +KA + ++M G P+ +VT N+LI G G
Sbjct: 220 VYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPN--------VVTFNSLISGYCDKGLL 271
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
G A + +++ G + G+FP+ V+F +++GF + G+L +A + EM + N++
Sbjct: 272 GLALKVRDLMMG--KNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTY 329
Query: 119 QPLS---GDVYWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDEL 165
L G S MG GL +E + Y LI C +G+ KA ++ EL
Sbjct: 330 NTLINGFGQAGNSEMGI--GLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKEL 387
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNN 224
V + + LI+G + ++ A + S+V + + TF L C N
Sbjct: 388 DKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNEN--TFRMLASAFCKNE 445
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+F V+ VL ML PD ++ + + CRC G K + +
Sbjct: 446 DFDGAVQ----------------VLRDMLERFMTPDSSILSEVYSGLCRC--GRKQFALM 487
Query: 285 M 285
+
Sbjct: 488 L 488
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------EFSPSLVTCNALI 52
+M C G+ KA H HD +I KGF + VT E SL +I
Sbjct: 51 VMKGMCLTGQVRKALHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLII 110
Query: 53 HGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS 112
+A + M +FPD V++T ++ GF +G+ ++A L +++M+
Sbjct: 111 ----------DASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGL---LNQMLLK 157
Query: 113 NNMLAIQPLS---------GDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKA 158
N L +Q + G+V ++M KQG D Y SL++ Y EV KA
Sbjct: 158 NISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKA 217
Query: 159 KTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
+ + + G + Y V+I+GL KK EA + L + + T+T+++LI
Sbjct: 218 TYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKEL--QIKNMAPDTITYNSLI 275
Query: 219 ENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
+ L K RI D+ + +++ M + D YN L+ C+ D
Sbjct: 276 DG-----------LCKSGRISDVWD----LIDEMHNIGQPADVITYNSLLDALCKNHQVD 320
Query: 279 KA 280
KA
Sbjct: 321 KA 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 118/251 (47%), Gaps = 27/251 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y++LM Y E +KA ++ + + G +P S+ + + +I+GL +
Sbjct: 199 FTYISLMDGYFLVKEVNKATYVFNTIARSGVIP--------SVQSYSVMINGLCKKKMVD 250
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EA+ + + + + PDT+++ +++ G + G + +DL EM + Q +++ L
Sbjct: 251 EAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLL 310
Query: 122 -------SGDVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
D +L+ K QG + YT L++ C +G + A+ + L G
Sbjct: 311 DALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLIKGYH 370
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI----ENCSNNEFT 227
+Y V+++GL K+ +A ++ + + CT + +T++TLI EN N++
Sbjct: 371 LDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPN--AVTYETLIRALFENGKNDKTV 428
Query: 228 SLVE--LVKGF 236
L+ +V+G
Sbjct: 429 KLLREMIVRGI 439
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 57/250 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G+F +A + +QM+ K S + T N L+ GL G ++
Sbjct: 130 TYTTLIHGFCIVGQFKEAVGLLNQMLLK--------NISLDVQTFNTLVDGLCKEGEVKQ 181
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA------------------YDL--- 102
A +L M + G+ PD ++ +++ G+F + E+ KA Y +
Sbjct: 182 ARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSVMIN 241
Query: 103 ----KLEMDEMMQSNNMLAIQPLSGDV------------------YWSL---MGKQGGLL 137
K +DE + L I+ ++ D W L M G
Sbjct: 242 GLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPA 301
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
D + Y SL++A C + +V KA TLL ++ G Y +L+ GL K R ++A+ +
Sbjct: 302 DVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVY 361
Query: 198 LSLV---YHL 204
+L+ YHL
Sbjct: 362 QNLLIKGYHL 371
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 48/297 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C +GE A M D+M G +P +++ ++++G +
Sbjct: 155 YTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP--------CVLSTTSILYGCCQANNVD 206
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA ++ M E PD +S V++GF ++G L +A
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF-------------------- 246
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
W ++ G L+ +Y SLINA+ +A ++ G V V+Y ++I
Sbjct: 247 ---VW-MIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIR 302
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
GL K+ R EA KML +++ LC +E +N T
Sbjct: 303 GLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCT 362
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + + + R + EA + N M +P +N LI C+ N +KA +++
Sbjct: 363 HTILICEMCK-RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 52/323 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y +L+ + + +A + +M +G +PD +V +I GL GR E
Sbjct: 261 SYASLINAFFKARRYREAHACYTKMFKEGIVPD--------VVLYAIMIRGLSKEGRVGE 312
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A ++L M ++GL PD+ + AV+ G + L +A L LE+ E + + I +
Sbjct: 313 AAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCK 372
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
++ M K G V + +LIN C + KAK L +L G R+ +
Sbjct: 373 RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKL-EVG--RRHSL 429
Query: 177 YDVLISG---------LDKKARTQ-EAKKMLLS--LVYHLCTSSWP-TLTFDTLIE---- 219
+ L G L KKA+ EA ++L + L+ L P +T++ L+
Sbjct: 430 HLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCM 489
Query: 220 ----NCSNNEFTSLVE-------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
N + N F L + ++KG + D E+EA V M +P +
Sbjct: 490 DREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLS 549
Query: 263 VYNFLIVEHCRCDNGDKAYDMYM 285
VY L+ CR +A+ +Y+
Sbjct: 550 VYRTLMTCLCRKSKVSRAFTLYL 572
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C E + A++ + + KG+ P SP VT +I GL R +E
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGY-P------SPDNVTYGTIIKGLFMVDREDE 531
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ + M + G P + +++ R ++ +A+ L LE + + S + +I L
Sbjct: 532 AFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEK 591
Query: 124 DVYWSLMGKQ-GGLLD---------EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
++ + + GLL+ YT L+ +C G+V +A +L L F
Sbjct: 592 YLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKIN 651
Query: 174 SVIYDVLISGLDKKARTQEAKKMLL-------SLVYHLCTSSWPTLTFDTLIENCSNNEF 226
+ LI GL K+ R +A K+ L L +C L + + C+
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCLLYSRDYKECA---- 707
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWN 256
L++ ++ F R E A+ L + H+
Sbjct: 708 VDLIDRMESFGYRLNSEEFATTLTLLHHYQ 737
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 48/297 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C +GE A M D+M G +P +++ ++++G +
Sbjct: 155 YTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVP--------CVLSTTSILYGCCQANNVD 206
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA ++ M E PD +S V++GF ++G L +A
Sbjct: 207 EAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF-------------------- 246
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
W ++ G L+ +Y SLINA+ +A ++ G V V+Y ++I
Sbjct: 247 ---VW-MIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIR 302
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
GL K+ R EA KML +++ LC +E +N T
Sbjct: 303 GLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCT 362
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + + + R + EA + N M +P +N LI C+ N +KA +++
Sbjct: 363 HTILICEMCK-RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 52/323 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y +L+ + + +A + +M +G +PD +V +I GL GR E
Sbjct: 261 SYASLINAFFKARRYREAHACYTKMFKEGIVPD--------VVLYAIMIRGLSKEGRVGE 312
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A ++L M ++GL PD+ + AV+ G + L +A L LE+ E + + I +
Sbjct: 313 AAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCK 372
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
++ M K G V + +LIN C + KAK L +L G R+ +
Sbjct: 373 RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKL-EVG--RRHSL 429
Query: 177 YDVLISG---------LDKKARTQ-EAKKMLLS--LVYHLCTSSWP-TLTFDTLIE---- 219
+ L G L KKA+ EA ++L + L+ L P +T++ L+
Sbjct: 430 HLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCM 489
Query: 220 ----NCSNNEFTSLVE-------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
N + N F L + ++KG + D E+EA V M +P +
Sbjct: 490 DREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLS 549
Query: 263 VYNFLIVEHCRCDNGDKAYDMYM 285
VY L+ CR +A+ +Y+
Sbjct: 550 VYRTLMTCLCRKSKVSRAFTLYL 572
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C E + A++ + + KG+ P SP VT +I GL R +E
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGY-P------SPDNVTYGTIIKGLFMVDREDE 531
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ + M + G P + +++ R ++ +A+ L LE + + S + +I L
Sbjct: 532 AFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEK 591
Query: 124 DVYWSLMGKQ-GGLLD---------EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
++ + + GLL+ YT L+ +C G+V +A +L L F
Sbjct: 592 YLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKIN 651
Query: 174 SVIYDVLISGLDKKARTQEAKKMLL-------SLVYHLCTSSWPTLTFDTLIENCSNNEF 226
+ LI GL K+ R +A K+ L L +C L + + C+
Sbjct: 652 ATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCLLYSRDYKECA---- 707
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWN 256
L++ ++ F R E A+ L + H+
Sbjct: 708 VDLIDRMESFGYRLNSEEFATTLTLLHHYQ 737
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 37/271 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ K PD + T NALI+G G+ ++A
Sbjct: 244 YNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPD--------VNTYNALINGFCIVGKLKDA 295
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F +V F + G +++A N LA
Sbjct: 296 IGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA-------------KNGLA------- 335
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG D V Y SL++ YC EV KAK++ + ++H G Y ++I+
Sbjct: 336 ----MMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRF 391
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K +A K L ++H +P +T+ +LI+ C + + +EL R +
Sbjct: 392 CKIKMVDQAMK-LFKEMHH--KQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQ 448
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ ++ + +P+ Y LI C+
Sbjct: 449 PDIITLTRQLKDQGIRPNMFTYTILIDGLCK 479
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 103/251 (41%), Gaps = 37/251 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
Y + L+ +C +G +A + M+ +G PD VT
Sbjct: 311 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFN 370
Query: 40 EFSPSLVTCNA-----LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
S VT N +I+ ++A+++ + M +FP+ +++++++ G + G
Sbjct: 371 TMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSG 430
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
+ A +L EM + Q +++ + D QG + YT LI+ C G
Sbjct: 431 RISYALELNDEMHDRGQQPDIITLTRQLKD--------QGIRPNMFTYTILIDGLCKGGR 482
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ A+ + ++L G Y V+I G K EA +L + + C + +T+
Sbjct: 483 LEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN--AVTY 540
Query: 215 DTLIENCSNNE 225
+ +I + +N+
Sbjct: 541 EIIIRSLFDND 551
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 55/302 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE----------------------- 40
+ L+ C KG+ +A + HD+++ GF + ++
Sbjct: 159 TFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218
Query: 41 ----FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V + +I G+ +A ++ M G+ P+ V+++A++SGFF +G+L
Sbjct: 219 DGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKL 278
Query: 97 RKAYDLKLEM------DEMMQSNNMLAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSL 145
+ A DL +M ++ N ++ + SG + ++L M +G + V Y+S+
Sbjct: 279 KDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 338
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
++A C V KA LL +L G Y +LI GL + ++A+ +
Sbjct: 339 LDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI--------- 389
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
F+ L+ + + + + GF + L +EA+++L+ M PD Y
Sbjct: 390 --------FEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYE 441
Query: 266 FL 267
+
Sbjct: 442 LI 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 111/287 (38%), Gaps = 61/287 (21%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + ++G + ++ +M +G P+LV CN LI+ G
Sbjct: 87 AIEFNKILGSLVKSKHYHTVLYLSKKMEFRGI--------KPNLVNCNILINCFCQLGLI 138
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
A + + +MG P+T++FT ++ G G++ +A + + ++A+
Sbjct: 139 PFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF---------HDKLVAL--- 186
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS--VIYDV 179
G ++++Y +LI+ C GE A LL + G + Q V+Y
Sbjct: 187 ------------GFQFNQISYGTLIDGLCKVGETRAALDLLRRVD--GKLVQPNVVMYST 232
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV---ELVKGF 236
+I G+ K +A FD E S ++V L+ GF
Sbjct: 233 IIDGMCKDKHVNDA--------------------FDLYSEMVSKGISPNVVTYSALISGF 272
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+A + N M+ N KPD VY F I+ C +G +Y +
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPD--VYTFNILVDVFCKSGKISYAL 317
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ +C G+ KAF + ++M+ K +P++ T N L+ GL G+ E
Sbjct: 187 TYTSLIYGFCIVGQLDKAFGLLNEMVLK--------NVNPNVCTFNTLVDGLCKEGKMRE 238
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM----LAIQ 119
A ++ M + G+ PD ++ A++ G+F + E KA ++ M +M + ++ + I
Sbjct: 239 AKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMIS 298
Query: 120 PLSG--------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
LS D++ M + + D V Y+SLI+ C G + A +DE+ G
Sbjct: 299 GLSKMKMLDEAMDLFEG-MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 357
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLS---------------LVYHLCTSSWPT---LT 213
+ Y LI L K + +A +L LV LC T
Sbjct: 358 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKV 417
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
F L+ N + + ++ G L +EA ++L+ M PD Y +I
Sbjct: 418 FQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFE 477
Query: 274 CDNGDKA 280
D DKA
Sbjct: 478 KDMNDKA 484
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 131/297 (44%), Gaps = 41/297 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC + + AF + +++ G+ PD ++T LI GL G+ +E+L
Sbjct: 51 LINSYCHLRQINSAFSVFAKILKLGYQPD--------IITYTTLIRGLCLNGQVKESLNF 102
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSG--- 123
+ G+ D VS+ +++G +IG+ A L +++ E+ + + ++ + G
Sbjct: 103 HDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCK 162
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
D+Y + K+ + V YTSLI +C G++ KA LL+E+ +V +V
Sbjct: 163 DKLVRDAFDLYCEMFEKR-VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV-LKNVNPNV 220
Query: 176 -IYDVLISGLDKKARTQEAKKMLLSLV-----------------YHLCTSSWPTL-TFDT 216
++ L+ GL K+ + +EAK ++ ++ Y L + F+
Sbjct: 221 CTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNI 280
Query: 217 LIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ + + S ++ G + +EA + M + N PD Y+ LI C+
Sbjct: 281 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCK 337
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 57/316 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
Y L+ C G+ ++ + HD+++ +G D V+ +
Sbjct: 82 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 141
Query: 43 ------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P +V N +I GL +A ++ M E +FP+ V++T+++ GF +G+L
Sbjct: 142 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 201
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSL 145
KA+ L EM + N+ L ++M K+G D Y +L
Sbjct: 202 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 261
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
++ Y E KAK + + + G Y V+ISGL K EA +
Sbjct: 262 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL--------- 312
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+ + + +I + ++SL++ L K RI N A ++ M P+ Y
Sbjct: 313 ---FEGMRNENVIPDVV--AYSSLIDGLCKSGRI----NSALKYVDEMHDRGQPPNVITY 363
Query: 265 NFLIVEHCRCDNGDKA 280
LI C+ DKA
Sbjct: 364 TSLIDALCKSHQVDKA 379
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P +V ++LI GL GR AL+ + M + G P+ +++T+++ + ++ KA L
Sbjct: 323 PDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIAL 382
Query: 103 -KLEMDEMMQSN----NMLAIQPLSGD--------VYWSLMGKQGGLLDEVNYTSLINAY 149
K D+ +Q+N N+L + L D V+ L+ K G +D V Y+ +IN
Sbjct: 383 LKKIKDQGIQANMYTYNIL-VDGLCKDGRLTDAQKVFQDLLMK-GHNVDVVTYSIMINGL 440
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
C + +A TLL ++ G V ++ Y+ +I+ +K +A+K+L ++
Sbjct: 441 CKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 492
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 32/199 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G KA + ++ PD T FS +I GL R EEA E
Sbjct: 16 LINGHCKDGAIIKAREPLEMLLENRLKPDIFT-FS-------CIIDGLCRLKRTEEAFEC 67
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
M E G+ P+ + + ++ IGE ++ L M E + +S D+Y
Sbjct: 68 FNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQE----------EGISPDIY- 116
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+Y +LI +C +V KAK L D ++ G + Y I+ L +
Sbjct: 117 -------------SYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSES 163
Query: 188 ARTQEAKKMLLSLVYHLCT 206
R +EAKKM S+ + C+
Sbjct: 164 GRLEEAKKMFYSIEANGCS 182
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 42/296 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C +GE KA ++ MI +G ++VT N+L+ G +
Sbjct: 274 VYTFNILVDGLCKEGEMKKARNVLAVMIKQGV--------DSNIVTYNSLMDGYFLVKQE 325
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A + M G+ PD S++ +++G + + +A +L EM + N + L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385
Query: 122 SGDVY--------WSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ W L M +G D + Y+SL++A C + +V KA TL+ ++ G
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIENCSNNEFT 227
Y +L+ GL K R ++A+ + L+ YHL D + N
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHL----------DVKMYNV------ 489
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+V G L +EA S+++ M PD Y L+ D DKA +
Sbjct: 490 ----MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKL 541
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 129/290 (44%), Gaps = 40/290 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G + AF + ++ GF PD VT LI GL G+ EAL
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPD--------TVTITTLIKGLCLNGKVREALHF 156
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
+ G D VS+ +++G + GE R A + ++D ++ N++ +
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216
Query: 122 ------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ D+ ++ K+ D V YT+LI G + +A L +++ +++ V
Sbjct: 217 DKLVIHASDLCSEMIVKR-IFPDVVTYTTLIYGCLIVGRLKEAVGLFNQML-LKNIKPDV 274
Query: 176 -IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
+++L+ GL K+ ++A+ +L ++ S+ +T+++L++
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSN--IVTYNSLMD--------------- 317
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
G+ + EN+A V NTM PD Y+ +I C+ D+A +++
Sbjct: 318 GYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R M G+ +TV++ ++ F R+ +++A L EM
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF--------------- 540
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI--YDVLI 181
+G LD + Y LI A C G K L++++ FG+ I ++LI
Sbjct: 541 ---------RGCPLDNITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILI 589
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+ + + +A + L ++ T +T+++LI C F + L G + +
Sbjct: 590 NSFCRTGKVNDALQFLRDMIQRGLTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ PD YN LI +C
Sbjct: 648 IH----------------PDAVTYNTLISRYC 663
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +QM F E PS+ +CN LI+ G+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQM--------FGEEIFPSINSCNILINSFCRTGKVND 600
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+ LR M + GL PD V++ ++++G ++G ++A +L
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL--------------------- 639
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G D V Y +LI+ YC +G A LL + G + + + +LI+
Sbjct: 640 ---FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINY 696
Query: 184 LDKKARTQ 191
KK + +
Sbjct: 697 FVKKHQRE 704
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R M G+ +TV++ ++ F R+ +++A L EM
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF--------------- 540
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI--YDVLI 181
+G LD + Y LI A C G K L++++ FG+ I ++LI
Sbjct: 541 ---------RGCPLDNITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILI 589
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+ + + +A + L ++ T +T+++LI C F + L G + +
Sbjct: 590 NSFCRTGKVNDALQFLRDMIQRGLTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ PD YN LI +C
Sbjct: 648 IH----------------PDAVTYNTLISRYC 663
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +QM F E PS+ +CN LI+ G+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQM--------FGEEIFPSINSCNILINSFCRTGKVND 600
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+ LR M + GL PD V++ ++++G ++G ++A +L
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL--------------------- 639
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G D V Y +LI+ YC +G A LL + G + + + +LI+
Sbjct: 640 ---FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINY 696
Query: 184 LDKKARTQ 191
KK + +
Sbjct: 697 FVKKHQRE 704
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R M G+ +TV++ ++ F R+ +++A L EM
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF--------------- 540
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI--YDVLI 181
+G LD + Y LI A C G K L++++ FG+ I ++LI
Sbjct: 541 ---------RGCPLDNITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILI 589
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+ + + +A + L ++ T +T+++LI C F + L G + +
Sbjct: 590 NSFCRTGKVNDALQFLRDMIQRGLTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ PD YN LI +C
Sbjct: 648 IH----------------PDAVTYNTLISRYC 663
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +QM F E PS+ +CN LI+ G+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQM--------FGEEIFPSINSCNILINSFCRTGKVND 600
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+ LR M + GL PD V++ ++++G ++G ++A +L
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL--------------------- 639
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G D V Y +LI+ YC +G A LL + G + + + +LI+
Sbjct: 640 ---FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINY 696
Query: 184 LDKKARTQ 191
KK + +
Sbjct: 697 FVKKHQRE 704
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R M G+ +TV++ ++ F R+ +++A L EM
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF--------------- 540
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI--YDVLI 181
+G LD + Y LI A C G K L++++ FG+ I ++LI
Sbjct: 541 ---------RGCPLDNITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILI 589
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+ + + +A + L ++ T +T+++LI C F + L G + +
Sbjct: 590 NSFCRTGKVNDALQFLRDMIQRGLTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ PD YN LI +C
Sbjct: 648 IH----------------PDAVTYNTLISRYC 663
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +QM F E PS+ +CN LI+ G+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQM--------FGEEIFPSINSCNILINSFCRTGKVND 600
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+ LR M + GL PD V++ ++++G ++G ++A +L
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL--------------------- 639
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G D V Y +LI+ YC +G A LL + G + + + +LI+
Sbjct: 640 ---FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINY 696
Query: 184 LDKKARTQ 191
KK + +
Sbjct: 697 FVKKHQRE 704
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 55/272 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R M G+ +TV++ ++ F R+ +++A L EM
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF--------------- 540
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI--YDVLI 181
+G LD + Y LI A C G K L++++ FG+ I ++LI
Sbjct: 541 ---------RGCPLDNITYNGLIKALCKTGATEKCLGLIEQM--FGEEIFPSINSCNILI 589
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+ + + +A + L ++ T +T+++LI C F + L G + +
Sbjct: 590 NSFCRTGKVNDALQFLRDMIQRGLTPD--IVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ PD YN LI +C
Sbjct: 648 IH----------------PDAVTYNTLISRYC 663
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +QM F E PS+ +CN LI+ G+ +
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQM--------FGEEIFPSINSCNILINSFCRTGKVND 600
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+ LR M + GL PD V++ ++++G ++G ++A +L
Sbjct: 601 ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL--------------------- 639
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G D V Y +LI+ YC +G A LL + G + + + +LI+
Sbjct: 640 ---FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINY 696
Query: 184 LDKKARTQ 191
KK + +
Sbjct: 697 FVKKHQRE 704
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 36/271 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + ++A+ ++ QMI V + SP +VT +ALI+G G+ +EA
Sbjct: 191 YSTIIDSLCKEKLVTEAYELYSQMI--------VKKVSPDVVTFSALIYGFCMVGQFKEA 242
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD-LKLEMDEMMQSNNMLAIQPLSG 123
+ M + PD +F +V + G ++ + L + M E+ Q N +
Sbjct: 243 FGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHV----- 297
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++++GK+ D +YT +I C V +A +L +E+ G V Y LI G
Sbjct: 298 ---FNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDG 354
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
L K R A ++L + H +T+ + + C N++ V LVK + + ++
Sbjct: 355 LCKSERISHAWELLDQM--HARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQ 412
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
P+ YN LI C+
Sbjct: 413 ----------------PNINTYNILIDGLCK 427
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 124/287 (43%), Gaps = 19/287 (6%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ YC GE AF + +++ G+ PD +T LI GL G+ EAL
Sbjct: 89 VINCYCHLGEMDFAFSVLAKILKMGYHPD--------TITLTTLIKGLCLNGKVHEALHF 140
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ G + VS+ +++G ++GE R A + ++D + + N+ L
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+ L + Y +S M + D V +++LI +C G+ +A L E+
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++L+ L K+ T+E K +L ++ + + F+ + + + S ++K
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ +EA S+ N M PD Y+ LI C+ + A+++
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++Y ++ C +A + ++M KG PD VT S LI GL R
Sbjct: 310 VHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSS--------LIDGLCKSERI 361
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-KLEMDEMMQSN----NML 116
A E+L M G D +++T+ + + ++ KA L K D+ +Q N N+L
Sbjct: 362 SHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNIL 421
Query: 117 AIQPL-------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
I L + V + + +G + Y +IN C +G +A TLL+++ G
Sbjct: 422 -IDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
V Y+ +I L K +A+K+L ++
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMI 512
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 49/270 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ +C A+ ++ +MI V + P++VT N+LI+G G+ EEA
Sbjct: 198 YTAIIDSFCKDKLVIDAYDLYSEMI--------VKKIYPNVVTFNSLIYGFCIVGQFEEA 249
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M P+ +F +V G + GE+++A +
Sbjct: 250 VGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSV---------------------- 287
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M KQ D V Y SL++ Y EV KA + D L G Y V+I+GL
Sbjct: 288 --LTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGL 345
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLEN 243
K EA ++L H + + T+T+++LI+ C + + + L+ +I+DL
Sbjct: 346 CKVKMVDEA--VILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDL-- 401
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
KPD Y+ LI C+
Sbjct: 402 ------------GVKPDVYTYSILIDRLCK 419
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 52/260 (20%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
F+ A QM KG PD + T + LI+ G+ A IL + ++G
Sbjct: 68 NHFNIAISFSQQMELKGIQPD--------IFTLSILINCFCQLGQINFAFSILGKILKLG 119
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
P+TV+ T ++ G GE+RKA + N+++A +G
Sbjct: 120 YEPNTVTLTTLIKGLCLNGEVRKA---------LYFHNDVIA---------------KGF 155
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAK 194
L+EV+Y +LIN C GE A LL ++ VR VI Y +I K +A
Sbjct: 156 YLNEVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 215
Query: 195 KMLLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTML 253
+ ++ +P +TF++LI GF I EA + N M+
Sbjct: 216 DLYSEMI---VKKIYPNVVTFNSLIY---------------GFCIVGQFEEAVGLFNEMI 257
Query: 254 HWNDKPDGAVYNFLIVEHCR 273
N P+ +N L+ C+
Sbjct: 258 LKNTNPNVYTFNILVDGLCK 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM Y E +KA ++ D + +G +P++ + + +I+GL +E
Sbjct: 302 TYNSLMDGYFLVKEVNKATYVFDTLARRGV--------TPNVRSYSVMINGLCKVKMVDE 353
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M L P+T+++ +++ G + G + + L +DEM + L ++P
Sbjct: 354 AVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYL---IDEMQIKD--LGVKP--- 405
Query: 124 DVY------------------WSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
DVY W L M +G + V YTSLI+ C + + KA L
Sbjct: 406 DVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALF 465
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
++ G Y++LI L K R +A
Sbjct: 466 TKMKDLGVEPNVYTYNILIDRLCKSGRIADA 496
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 35/230 (15%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILR-----GMPEMGLFPDTVSFTAVVSGFFRIG 94
SP++VT N LIHG G+ +A +L+ M G+ PDT S+ +++GF +I
Sbjct: 50 RISPNIVTYNTLIHGFCIVGQLNDAFGLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIK 109
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLDEVNYT 143
+ +A +L EM N++ L SG + ++L M +G + + Y
Sbjct: 110 MVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYN 169
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVY 202
S+++ C + +V KA L +L D++ S+ Y++LI GL K R ++A+K+ L
Sbjct: 170 SILDVLCKNYDVDKAIVFLTKLKD-QDIQPSMYTYNILIYGLCKVGRLKDARKVFEYL-- 226
Query: 203 HLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTM 252
L++ CS + +T + ++ GF + L EA ++L+ M
Sbjct: 227 --------------LVKGCSLDAYTYTI-MIHGFCSKGLFGEAFTLLSKM 261
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC E +F M +++ G+ PD +T N LI GL G+ +EAL
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPD--------TITFNTLIKGLCVNGKVKEALHF 155
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQPLSG 123
+ +G D VS+ +++G +IGE R A + +++ + + N++ I L
Sbjct: 156 HDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCK 215
Query: 124 D-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
D V +S M + + V + SLI +C G+ A L E+
Sbjct: 216 DKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYT 275
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++++ L K+ + +EAK ++ +++ C + + L+ G+
Sbjct: 276 FNIMVDALCKEGKMKEAKSVIA-----------------VMMKECVMPDVVTYNSLMDGY 318
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + N+A VL + PD Y+ +I C+ D+A ++
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 55/279 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C ++A+ ++ +MI K SP++VT N+LI+G G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITK--------RISPNVVTFNSLIYGFCIVGQFKDA 257
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + + PD +F +V + G++++A +
Sbjct: 258 FRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV---------------------- 295
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M K+ + D V Y SL++ YC EV KAK +L ++ + Y ++I+GL
Sbjct: 296 --IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGL 353
Query: 185 DKKARTQEAKKMLLSLVYHL-CTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
K EA LSL Y + C P T+T+ +LI+ C + ++ +LV
Sbjct: 354 CKVKMVDEA----LSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLV-------- 401
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M P+ YN LI C+ DKA
Sbjct: 402 --------DEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ +I K +P + + +I+GL +E
Sbjct: 310 TYNSLMDGYCLVNEVNKAKHVL-IIISK-------IRVAPDAHSYSIMINGLCKVKMVDE 361
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ P+TV++++++ G + G A+DL EM + N+
Sbjct: 362 ALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT------ 415
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y SLI+A C + ++ KA L+ ++ G Y++LI G
Sbjct: 416 ------------------YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Query: 184 LDKKARTQEAKKMLLSLV 201
L K R A+ + L+
Sbjct: 458 LCKGGRLHNARDVFQDLL 475
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC E +F M +++ G+ PD +T N LI GL G+ +EAL
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPD--------TITFNTLIKGLCVNGKVKEALHF 155
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQPLSG 123
+ +G D VS+ +++G +IGE R A + +++ + + N++ I L
Sbjct: 156 HDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCK 215
Query: 124 D-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
D V +S M + + V + SLI +C G+ A L E+
Sbjct: 216 DKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYT 275
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++++ L K+ + +EAK ++ +++ C + + L+ G+
Sbjct: 276 FNIMVDALCKEGKMKEAKSVIA-----------------VMMKECVMPDVVTYNSLMDGY 318
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + N+A VL + PD Y+ +I C+ D+A ++
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 55/279 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C ++A+ ++ +MI K SP++VT N+LI+G G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITK--------RISPNVVTFNSLIYGFCIVGQFKDA 257
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + + PD +F +V + G++++A +
Sbjct: 258 FRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV---------------------- 295
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M K+ + D V Y SL++ YC EV KAK +L ++ + Y ++I+GL
Sbjct: 296 --IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGL 353
Query: 185 DKKARTQEAKKMLLSLVYHL-CTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
K EA LSL Y + C P T+T+ +LI+ C + ++ +LV
Sbjct: 354 CKVKMVDEA----LSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLV-------- 401
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M P+ YN LI C+ DKA
Sbjct: 402 --------DEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ +I K +P + + +I+GL +E
Sbjct: 310 TYNSLMDGYCLVNEVNKAKHVL-IIISK-------IRVAPDAHSYSIMINGLCKVKMVDE 361
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ P+TV++++++ G + G A+DL EM + N+
Sbjct: 362 ALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT------ 415
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y SLI+A C + ++ KA L+ ++ G Y++LI G
Sbjct: 416 ------------------YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Query: 184 LDKKARTQEAKKMLLSLV 201
L K R A+ + L+
Sbjct: 458 LCKGGRLHNARDVFQDLL 475
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC E +F M +++ G+ PD +T N LI GL G+ +EAL
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPD--------TITFNTLIKGLCVNGKVKEALHF 155
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQPLSG 123
+ +G D VS+ +++G +IGE R A + +++ + + N++ I L
Sbjct: 156 HDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCK 215
Query: 124 D-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
D V +S M + + V + SLI +C G+ A L E+
Sbjct: 216 DKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYT 275
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+++++ L K+ + +EAK ++ +++ C + + L+ G+
Sbjct: 276 FNIMVDALCKEGKMKEAKSVIA-----------------VMMKECVMPDVVTYNSLMDGY 318
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + N+A VL + PD Y+ +I C+ D+A ++
Sbjct: 319 CLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 55/279 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C ++A+ ++ +MI K SP++VT N+LI+G G+ ++A
Sbjct: 206 YSTIIDSLCKDKLVTEAYVLYSEMITK--------RISPNVVTFNSLIYGFCIVGQFKDA 257
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + + PD +F +V + G++++A +
Sbjct: 258 FRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV---------------------- 295
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M K+ + D V Y SL++ YC EV KAK +L ++ + Y ++I+GL
Sbjct: 296 --IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGL 353
Query: 185 DKKARTQEAKKMLLSLVYHL-CTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
K EA LSL Y + C P T+T+ +LI+ C + ++ +LV
Sbjct: 354 CKVKMVDEA----LSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLV-------- 401
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ M P+ YN LI C+ DKA
Sbjct: 402 --------DEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ +I K +P + + +I+GL +E
Sbjct: 310 TYNSLMDGYCLVNEVNKAKHVL-IIISK-------IRVAPDAHSYSIMINGLCKVKMVDE 361
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ P+TV++++++ G + G A+DL EM + N+
Sbjct: 362 ALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT------ 415
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y SLI+A C + ++ KA L+ ++ G Y++LI G
Sbjct: 416 ------------------YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDG 457
Query: 184 LDKKARTQEAKKMLLSLV 201
L K R A+ + L+
Sbjct: 458 LCKGGRLHNARDVFQDLL 475
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 32/172 (18%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G SKAF M ++M +GF PD L+T N LI+GL G ++A E+++ M G
Sbjct: 466 GNPSKAFGMKEEMKAEGFPPD--------LITYNVLINGLCKLGNFDDANELVQKMRLEG 517
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
+ PD V++T+++ G LRKA ++ +S M K+G
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEV------------------------FSDMLKKGI 553
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
V YT LI++Y G + AK DE+ G + Y+ LI GL K+
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 122/322 (37%), Gaps = 58/322 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ Y L+ +C K F +A + +M+ +G LP ++VT N +++ L GR
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP--------TVVTYNTIMYSLCRLGRV 328
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM--------------- 106
+A L M L PD VS+ ++ G+ R+G +A L E+
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Query: 107 -DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
D ++ N+ + + D M K G D V +T L+ +C G + AK L DE+
Sbjct: 389 IDGGCRTGNLDIAKGMKDD-----MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIEN-CS 222
G + Y I G K +A + + +P +T++ LI C
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKA----FGMKEEMKAEGFPPDLITYNVLINGLCK 499
Query: 223 NNEFTSLVELVKGFR-------------------IRDLENEAASVLNTMLHWNDKPDGAV 263
F ELV+ R I L +A V + ML P
Sbjct: 500 LGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVT 559
Query: 264 YNFLIVEHC---RCDNGDKAYD 282
Y LI + R D K +D
Sbjct: 560 YTVLIHSYAVRGRLDFAKKYFD 581
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 122/324 (37%), Gaps = 65/324 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y +M C G S A D M+++ +PD V+
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
PS+VT N LI G G + A + M + GL PD V+FT +V GF ++G L
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433
Query: 97 RKAYDLKLEM-DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDE----------VNYTSL 145
A +L EM ++ + + + G++ K G+ +E + Y L
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVL 493
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQ-----SVIYDVLISGLDKKARTQEAKKMLLSL 200
IN C G A L+ ++ G V S+I+ LISGL +KA
Sbjct: 494 INGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE---------- 543
Query: 201 VYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPD 260
F +++ + + L+ + +R + A + M P+
Sbjct: 544 ------------VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 261 GAVYNFLIVEHCRCDNGDKAYDMY 284
YN LI C+ + D AY+++
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLF 615
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 113/288 (39%), Gaps = 38/288 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
+M C +GE +A + D M G P+ V+ N L++GL G + A E+
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGC--------DPNDVSYNVLVNGLSGKGEFDRAKEL 264
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNMLAIQPL 121
+ M +GL ++ ++ GF + +A DL+ EM ++ N ++
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324
Query: 122 SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G V Y +M + + D V+Y +LI Y G +A L EL V V
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
Y+ LI G + AK M ++ H LC +TF LV+G
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD---VVTFTI---------------LVRG 426
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
F A + + ML KPD Y IV + N KA+ M
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGM 474
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 51/274 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + K K + +M++ G LPD + CN ++ L E E+
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPD--------VRNCNRVLKLLKDKSMVNEVEEV 194
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
M + + P V+F ++ + GE+ +A E++ M P
Sbjct: 195 YSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAV-------EVLDVMRMFGCDP------- 240
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
++V+Y L+N GE +AK L+++++ G + Y+ LI G KK
Sbjct: 241 ----------NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK 290
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAA 246
+EA + + L + PT +T++T+ + L + R+ D A
Sbjct: 291 EMFEEANDLRREM---LGRGALPTVVTYNTI-----------MYSLCRLGRVSD----AR 332
Query: 247 SVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L+ M++ + PD YN LI + R N +A
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ Y L+ C+ G+ A ++++M+ +G D +VTCNA+++GL G+
Sbjct: 293 AFTYSALIHGLCEGGDLDGARKVYEEMVLRGVKAD--------VVTCNAMLNGLCKAGKV 344
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+E+ E+ M G + VS+ + G F G++ DE++
Sbjct: 345 DESFELWEEMGNCG-SRNVVSYNVFLKGLFENGKV----------DEVIN---------- 383
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
W ++ + ++ Y L++ C +G V KA +L+ GD + Y +I
Sbjct: 384 ----VWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMI 439
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+GL ++ R EA K+L + C + ++ LI+ NN+ S V++ R+
Sbjct: 440 NGLCREGRLDEAAKVLNLMDKRGCKLN--AHVYNALIDGFMKNNKVDSAVQV-----FRE 492
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
+ S P+ YN +I CR + +AY
Sbjct: 493 MSTNGCS-----------PNVVTYNIVINGFCRAERFPEAY 522
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 110/286 (38%), Gaps = 40/286 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM C KGEF KA + M G PD T +L+ I L
Sbjct: 154 TYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFT--YGTLINLFVKIRDLN------S 205
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA---YDLKLEMDEMMQS----NNML 116
ALE+ M E G+ PD + ++ GFF++G+ K ++ L ++ + S N M+
Sbjct: 206 ALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMI 265
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ G W M D Y++LI+ C G++ A+ + +E+ G
Sbjct: 266 SGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEEMVLRGVK 325
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V + +++GL K + E+ ++ W + NC + S
Sbjct: 326 ADVVTCNAMLNGLCKAGKVDESFEL------------WEEMG------NCGSRNVVSYNV 367
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
+KG +E +V + + + Y L+ H C NG
Sbjct: 368 FLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILV--HGLCKNG 411
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 54/289 (18%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+F K M ++++ V PS+V+ N +I GL GR +E+LEI M
Sbjct: 236 GDFVKGKMMWERLLR-------VETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMND 288
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
D +++A++ G G+L A + EM ++ + DV
Sbjct: 289 WKHDAFTYSALIHGLCEGGDLDGARKVYEEM----------VLRGVKADV---------- 328
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
V +++N C G+V ++ L +E+ + G R V Y+V + GL + + E
Sbjct: 329 ----VTCNAMLNGLCKAGKVDESFELWEEMGNCGS-RNVVSYNVFLKGLFENGKVDEVIN 383
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIR--DLE---------- 242
+ L C + T+ L+ C N T + +++G R D++
Sbjct: 384 VWEVLREMDCDVE--STTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMING 441
Query: 243 -------NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+EAA VLN M K + VYN LI + + D A ++
Sbjct: 442 LCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVF 490
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A+ Y L+ C+ G+ A ++++M+ +G D +VTCNA+++GL G+
Sbjct: 293 AFTYSALIHGLCEGGDLDGARKVYEEMVLRGVKAD--------VVTCNAMLNGLCKAGKV 344
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+E+ E+ M G + VS+ + G F G++ DE++
Sbjct: 345 DESFELWEEMGNCG-SRNVVSYNVFLKGLFENGKV----------DEVIN---------- 383
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
W ++ + ++ Y L++ C +G V KA +L+ GD + Y +I
Sbjct: 384 ----VWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMI 439
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+GL ++ R EA K+L + C + ++ LI+ NN+ S V++ R+
Sbjct: 440 NGLCREGRLDEAAKVLNLMDKRGCKLN--AHVYNALIDGFMKNNKVDSAVQV-----FRE 492
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
+ S P+ YN +I CR + +AY
Sbjct: 493 MSTNGCS-----------PNVVTYNIVINGFCRAERFPEAY 522
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 110/286 (38%), Gaps = 40/286 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM C KGEF KA + M G PD T +L+ I L
Sbjct: 154 TYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFT--YGTLINLFVKIRDLN------S 205
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA---YDLKLEMDEMMQS----NNML 116
ALE+ M E G+ PD + ++ GFF++G+ K ++ L ++ + S N M+
Sbjct: 206 ALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNIMI 265
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ G W M D Y++LI+ C G++ A+ + +E+ G
Sbjct: 266 SGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEEMVLRGVK 325
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V + +++GL K + E+ ++ W + NC + S
Sbjct: 326 ADVVTCNAMLNGLCKAGKVDESFEL------------WEEMG------NCGSRNVVSYNV 367
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
+KG +E +V + + + Y L+ H C NG
Sbjct: 368 FLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILV--HGLCKNG 411
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 54/289 (18%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+F K M ++++ V PS+V+ N +I GL GR +E+LEI M
Sbjct: 236 GDFVKGKMMWERLLR-------VETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMND 288
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
D +++A++ G G+L A + EM ++ + DV
Sbjct: 289 WKHDAFTYSALIHGLCEGGDLDGARKVYEEM----------VLRGVKADV---------- 328
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
V +++N C G+V ++ L +E+ + G R V Y+V + GL + + E
Sbjct: 329 ----VTCNAMLNGLCKAGKVDESFELWEEMGNCGS-RNVVSYNVFLKGLFENGKVDEVIN 383
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIR--DLE---------- 242
+ L C + T+ L+ C N T + +++G R D++
Sbjct: 384 VWEVLREMDCDVE--STTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMING 441
Query: 243 -------NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+EAA VLN M K + VYN LI + + D A ++
Sbjct: 442 LCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVF 490
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 65/258 (25%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILR--- 69
C KG+ +A H HD++I GF D V+ LI+GLG G +EALE+LR
Sbjct: 56 CLKGQIHQALHFHDKVIAMGFHLDQVSY--------GTLINGLGKVGETKEALELLRRVD 107
Query: 70 ----------------GM-------------PEM---GLFPDTVSFTAVVSGFFRIGELR 97
GM EM ++P V+++A++ GF +G+L+
Sbjct: 108 GKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLK 167
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
A + + ++ N+ A +M KQ + Y SL++ YC EV K
Sbjct: 168 DA------IGRVKEAKNVFA-----------MMMKQDIKPNVFTYNSLMDGYCLVKEVNK 210
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDT 216
AK++ + + G Y++LI+G K T EA + + H C P +T+++
Sbjct: 211 AKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEM--H-CRKLIPDVVTYNS 267
Query: 217 LIEN-CSNNEFTSLVELV 233
LI+ C +F+ ++LV
Sbjct: 268 LIDGLCKLGKFSYALKLV 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 58/285 (20%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G S AF + +++ G+ PD +T I L G+ +AL
Sbjct: 16 LINCFCQLGLISFAFSILAKILKNGYEPD--------TITLTTFIKVLCLKGQIHQALHF 67
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSGDVY 126
+ MG D VS+ +++G ++GE ++A +L +D +++Q
Sbjct: 68 HDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQ--------------- 112
Query: 127 WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL-- 184
L+ V Y ++I+ C D V A L E+ V Y LI G
Sbjct: 113 ----------LNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCI 162
Query: 185 -----DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
D R +EAK + + + ++ N FT L+ G+ +
Sbjct: 163 VGKLKDAIGRVKEAKNVFAMM----------------MKQDIKPNVFT-YNSLMDGYCLV 205
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N+A S+ NTM PD YN LI C+ D+A +++
Sbjct: 206 KEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLF 250
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +LM YC E +KA + + M G PD + + N LI+G
Sbjct: 192 VFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD--------IHSYNILINGFCKSKMT 243
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+ + M L PD V++ +++ G ++G+ A L EM + Q N+
Sbjct: 244 DEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNI------ 297
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ Y+S++NA C + +V KA TLL ++
Sbjct: 298 ------------------ITYSSILNALCKNHQVDKAITLLTKI 323
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 120/289 (41%), Gaps = 68/289 (23%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+P ++T N LI G F + A IL M E G+ PD VS+ ++ SG R L+K+
Sbjct: 38 LNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSL 97
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSL---------MGK---QGGLLDEV-------- 140
DL DEM+QS I+P DV WS +GK G+ ++
Sbjct: 98 DL---FDEMLQS----GIRP---DV-WSYNILMHCYFRLGKPEEANGVFRDIFERGEIYP 146
Query: 141 ---NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+Y +IN C +G V A L L G V + + Y+ +I+GL K R +A+++L
Sbjct: 147 SMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVL 206
Query: 198 LSLVYHLCTSSWP--TLTFDTLIENC----------------SNNEF--------TSLVE 231
C + +T+ T+++ C F T +
Sbjct: 207 ----NEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAA 262
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
LVK RI EA + M+ PD A YN +I CR D+A
Sbjct: 263 LVKTGRI----EEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEA 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ C G + A + + +GF+P+ ++T NA+I+GL R +
Sbjct: 150 SYNVMINGLCKNGYVNNALMLFRNLRRRGFVPE--------VLTYNAMINGLCKARRLAD 201
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A +L + G P+ +++T V+ FR G L + ++ EM + + A +
Sbjct: 202 ARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVA 261
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
D M G + D +Y ++IN +C G +A L+DE+ G
Sbjct: 262 ALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKC 321
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
+ ++I GL K + A+K L
Sbjct: 322 DQYTHTIIIHGLCKDGNFEGAEKHL 346
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 56/301 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ K SP + T NALI G G+ ++A
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEMVSK--------RISPDVFTYNALISGFCIVGKLKDA 96
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F +V F + G++++A N+LA
Sbjct: 97 IGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEA-------------KNVLA------- 136
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG + V Y++L++ YC +V KAK++ + + G Y +LI+GL
Sbjct: 137 ----MMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGL 192
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K T EA + + H C P +T+++LI+ C + + ++LV R +
Sbjct: 193 CKIKMTDEAMNLFEEM--H-CRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 249
Query: 243 -------------------NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
++A ++L + +P+ Y LI C+ D A+++
Sbjct: 250 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNI 309
Query: 284 Y 284
+
Sbjct: 310 F 310
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 36/277 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ +C +G+ +A ++ M+ +G P++VT +AL+ G +
Sbjct: 113 YTFNILVDAFCKEGKMKEAKNVLAMMMKQGM--------KPNVVTYSALMDGYCLVKKVN 164
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNML 116
+A I M + G+ PD S++ +++G +I +A +L EM +++ N+++
Sbjct: 165 KAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLI 224
Query: 117 AIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G + ++L M +G D + Y+S+++A C + +V KA LL +L G
Sbjct: 225 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 284
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
Y +LI GL K R +A + F+ L+ N +
Sbjct: 285 PNMYTYTILIDGLCKGGRLDDAHNI-----------------FEDLLVKGYNITVNTYTV 327
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
++ GF + L +EA ++L+ M + P+ Y +I
Sbjct: 328 MIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 46 VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE 105
V+ LI+GL G AL++LR + + P V + ++ G + + A+DL E
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 106 MDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M + +S DV+ Y +LI+ +C G++ A L +++
Sbjct: 68 M----------VSKRISPDVF--------------TYNALISGFCIVGKLKDAIGLFNKM 103
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE 225
T +++L+ K+ + +EAK +L ++ + T +
Sbjct: 104 TLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYS------------ 151
Query: 226 FTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ G+ + N+A S+ NTM PD Y+ LI C+ D+A +++
Sbjct: 152 -----ALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLF 205
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 49/280 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C AF ++ +M+ P++VT N LI+G G+ ++A
Sbjct: 67 YSTIIYSLCKDKLVIDAFDLYSEMV--------AMRIFPNVVTYNTLIYGFCIVGQMKQA 118
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+++L M + P+ V+F +V G + GE++KA +
Sbjct: 119 IDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKV---------------------- 156
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+ M KQG L+ V Y+ L++ Y EV KA + + + G Y V+I+GL
Sbjct: 157 --LAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGL 214
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K EA + + HL + +T+++LI+ L+K RI D
Sbjct: 215 CKNKMVDEAVNLFKEM--HLKNMAPDIVTYNSLIDG-----------LLKYGRISD---- 257
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A ++N M + D YN L+ C+ D A ++
Sbjct: 258 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLF 297
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 110/283 (38%), Gaps = 55/283 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM Y E +KA + + M+ +G + ++ + +I+GL +E
Sbjct: 171 TYSFLMDGYFLVKEVNKATFVFNTMVRRGV--------TSNVHSYTVMINGLCKNKMVDE 222
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + PD V++ +++ G + G + A+DL EM
Sbjct: 223 AVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDLVNEMHN--------------- 267
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G D + Y SL++A C + +V A TL ++ G Y +L+ G
Sbjct: 268 ---------RGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDG 318
Query: 184 LDKKAR---TQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
L K R QE ++LL YHL + ++ G
Sbjct: 319 LCKNGRLKDAQEVYQILLIKGYHLDVRMYTV--------------------MINGLCKES 358
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
L ++A S+L+ M P+ + LI D DKA ++
Sbjct: 359 LFDKALSLLSKMKDNGCTPNPVTFEILIRALFENDMNDKAVEL 401
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ K SP + T NALI G G+ ++A
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEMVSK--------RISPDVFTYNALISGFCIVGKLKDA 96
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M + PD +F +V F + G++++A N+LA
Sbjct: 97 IGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEA-------------KNVLA------- 136
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M KQG + V Y++L++ YC +V KAK++ + + G Y +LI+GL
Sbjct: 137 ----MMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGL 192
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELV 233
K T EA + + H C P +T+++LI+ C + + + ++LV
Sbjct: 193 CKIKMTDEAMNLFEEM--H-CRKIIPDVVTYNSLIDGLCKSGKISYALKLV 240
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 41/244 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F V+ LI+GL G AL++LR + + P V + ++ G + + A+
Sbjct: 3 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAF 62
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
DL EM + +S DV+ Y +LI+ +C G++ A
Sbjct: 63 DLYSEM----------VSKRISPDVF--------------TYNALISGFCIVGKLKDAIG 98
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
L +++T +++L+ K+ + +EAK +L ++ + T +
Sbjct: 99 LFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYS------- 151
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L+ G+ + N+A S+ NTM PD Y+ LI C+ D+A
Sbjct: 152 ----------ALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEA 201
Query: 281 YDMY 284
+++
Sbjct: 202 MNLF 205
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
++Y L+ C +A ++ ++M + +PD +VT N+LI GL G+
Sbjct: 183 HSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPD--------VVTYNSLIDGLCKSGKIS 234
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
AL+++ M + G+ PD +++++++ + ++ KA L + + NM L
Sbjct: 235 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILI 294
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ +++ L+ K G + YT +I+ +C G +A LL ++
Sbjct: 295 DGLCKGGRLEDAHNIFEDLLVK-GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC 353
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
++ Y+++I L K +A+K+L ++
Sbjct: 354 FPNALTYEIIIRSLFDKDENDKAEKLLREMI 384
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 39/243 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C + ++ + + MI + +PS+ T +I+GL + +EA +
Sbjct: 242 LINGFCKQKQYDRVSEILHIMI--------AMKCNPSIYTYQEIINGLLKRRKNDEAFRV 293
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ + G FPD V +T V+ GF +G L +A L W
Sbjct: 294 FNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKL------------------------W 329
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
M ++G + +E Y +I YC + +A+ L D++ G V Y +ISGL
Sbjct: 330 FEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLH 389
Query: 188 ARTQEAKKMLLSLVYHLCTS--SWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENE 244
+T EA LSL + + + +++++LI+ C E L+ I+ LE
Sbjct: 390 GKTDEA----LSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPS 445
Query: 245 AAS 247
+S
Sbjct: 446 VSS 448
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ YC +F++A ++D M +G+ + ++V+ + +I GL G+ +
Sbjct: 342 YTYNVMIYGYCKVRDFAEARKLYDDMCGRGY--------AENVVSYSTMISGLYLHGKTD 393
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EAL + M G+ D +S+ +++ G + GEL KA +L N L IQ L
Sbjct: 394 EALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLL----------NKLLIQGLE 443
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL--THFGDVRQSVIYDVL 180
V ++T LI C G+ A LL ++ H + + +D +
Sbjct: 444 PSV--------------SSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIAST--HDYM 487
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSW---PTL-TFDTLIE 219
I GL KK + + LL ++ SW P + TF+ LI+
Sbjct: 488 IIGLSKKGDFAQGMEWLLKML------SWKLKPNMQTFEHLID 524
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ + + +AF + + + +G+ PD V +I G G
Sbjct: 272 YTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMY--------TTVIKGFCDMGLLA 323
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA ++ M + GL P+ ++ ++ G+ ++ + +A L +M + N+++ +
Sbjct: 324 EARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMI 383
Query: 123 GDVY-----------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+Y + M ++G D ++Y SLI C +GE+ KA LL++L G
Sbjct: 384 SGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLE 443
Query: 172 RQSVIYDVLISGLDKKARTQEAKKML 197
+ LI L K T+ A ++L
Sbjct: 444 PSVSSFTPLIKCLCKVGDTEGAMRLL 469
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 105/268 (39%), Gaps = 44/268 (16%)
Query: 35 PDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
PDFV P + + LG G EE ++ + ++G P SF + ++G
Sbjct: 123 PDFV----PKNDSLEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVG 178
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
DL ++ E+M + + G +D LI A+CA+ +
Sbjct: 179 RT----DLVWKLYELMIESGV------------------GVNIDVETVGCLIKAFCAENK 216
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT- 213
V LL ++ G + +++ LI+G K+ + ++L ++ C S T
Sbjct: 217 VFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQE 276
Query: 214 -FDTLIENCSNNE----FTSLVE------------LVKGFRIRDLENEAASVLNTMLHWN 256
+ L++ N+E F L + ++KGF L EA + M+
Sbjct: 277 IINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKG 336
Query: 257 DKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
P+ YN +I +C+ + +A +Y
Sbjct: 337 LVPNEYTYNVMIYGYCKVRDFAEARKLY 364
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 58/312 (18%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPD----------------------FVTEFSPSLVTCN 49
YC KAF + + M+H G +PD F+ + + N
Sbjct: 543 YCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLN 602
Query: 50 -----ALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFR-------IGELR 97
AL+HG GR EAL M + G+ D V ++ G + G L+
Sbjct: 603 EMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLK 662
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWS-----LMGKQGGLLDEVNYTSLINAYCAD 152
K YD L D ++ ++ M+ G S LM + + V YT+ +N C
Sbjct: 663 KMYDQGLRPDSVIYTS-MIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
GE+ +A L +++ SV Y + L K+ +EA + ++ L + T
Sbjct: 722 GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLAN---TA 778
Query: 213 TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
T++ LI F L L+ EA VL+ M PD Y+ +I EHC
Sbjct: 779 TYNILIRG-----FCKLGRLI----------EATKVLSEMTENGIFPDCITYSTIIYEHC 823
Query: 273 RCDNGDKAYDMY 284
R + A +++
Sbjct: 824 RSGDVGAAVELW 835
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y +L+ +C G+ S A ++ +MI++G P+ T LI G + E
Sbjct: 429 YPYNSLINGHCKFGDLSAAEFLYTKMINEGL--------EPTATTFTTLISGYCKDLQVE 480
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A ++ R M E + P +FTA++ G E+ +A L DEM++ I+P
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKL---FDEMVERK----IKP-- 531
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
EV Y +I YC + KA LL+++ H G V + Y LIS
Sbjct: 532 ---------------TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576
Query: 183 GLDKKARTQEAK 194
GL R AK
Sbjct: 577 GLCSTGRVSAAK 588
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 38/292 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C +F + ++M+ GF+P TE + S L+ GL G +
Sbjct: 290 TYCTLVLGFCRVQQFDDGICLMNEMVELGFVP---TEAAVS-----GLVDGLRKKGNIDS 341
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +++ + G P+ + A+++ + +L KA L M M N + L
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401
Query: 124 --------DVYWSLMGK--QGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
DV S G+ + G+ + + Y SLIN +C G++ A+ L ++ + G
Sbjct: 402 SFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEP 461
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVE 231
+ + LISG K + ++A K+ + S TF LI CS NE
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPS--VYTFTALIYGLCSTNEMA---- 515
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
EA+ + + M+ KP YN +I +C+ N DKA+++
Sbjct: 516 ------------EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + L+ YC + KAF ++ +M K E +PS+ T ALI+GL
Sbjct: 463 ATTFTTLISGYCKDLQVEKAFKLYREMNEK--------EIAPSVYTFTALIYGLCSTNEM 514
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA ++ M E + P V++ ++ G+ + + KA++L +M + +PL
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574
Query: 122 ------SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+G V + + K+ L+E+ Y++L++ YC G + +A + E+ G
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
V + VLI G A Q+ K L L+
Sbjct: 635 NMDLVCHAVLIDG----AMKQQDMKRLFGLL 661
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 35/240 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C +G A +MI G ++ N+LI+G FG
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGI--------RETIYPYNSLINGHCKFGDLSA 446
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M GL P +FT ++SG+ + ++ KA+ L EM+E + ++
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE----------KEIAP 496
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
VY +T+LI C+ E+ +A L DE+ V Y+V+I G
Sbjct: 497 SVY--------------TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEG 542
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K +A ++L ++++ T T+ LI CS ++ + + ++L+
Sbjct: 543 YCKAHNMDKAFELLEDMLHNGLVPD--TYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLK 600
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 50/192 (26%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE--FSPSLV--------------- 46
Y M C GE +A H+ ++M+ P+ VT F SL
Sbjct: 710 TYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM 769
Query: 47 ---------TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
T N LI G GR EA ++L M E G+FPD ++++ ++ R G++
Sbjct: 770 LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVG 829
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
A +L W M ++G D V + LI C +G + K
Sbjct: 830 AAVEL------------------------WDTMLRKGVEPDSVAFNLLIYGCCVNGALDK 865
Query: 158 AKTLLDELTHFG 169
A L +++ G
Sbjct: 866 AFELRNDMLSRG 877
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 36/280 (12%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C +G+ +A ++ M+ KGF P++VT ++L+ G +A I M
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGF--------KPNVVTYSSLMDGYCLVKEVNKAKSIFNNM 52
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDV 125
+ G+ PD S+ +++GF +I A +L EM N++ L SG +
Sbjct: 53 AQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKI 112
Query: 126 YWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
++L M +G D + Y+SL++A C + KA LL +L G Y +L
Sbjct: 113 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTIL 172
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
I+GL K R ++A+ + F+ L+ N + ++ F
Sbjct: 173 INGLCKGGRPEDAQNI-----------------FEDLLVKGYNINVNTYTVMIHVFCNNG 215
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ EA ++L+ M P+ Y +I D DKA
Sbjct: 216 MFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKA 255
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y +LM YC E +KA + + M G PD +
Sbjct: 28 TYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 87
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+ P++VT N+LI GL G+ AL+++ M + G PD +++++++ +
Sbjct: 88 HCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPG 147
Query: 97 RKAYDLKLEM-DEMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNYTS 144
KA L ++ D+ +Q N ++G +++ L+ K G ++ YT
Sbjct: 148 DKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVK-GYNINVNTYTV 206
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+I+ +C +G +A +L ++ G + +V Y+++I L K +A+K+LL ++
Sbjct: 207 MIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMI 263
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y L+ C +G+ A D MI G LPD +++ N+++ L G A
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD--------ILSYNSILASLCKNGNA 407
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EAL I + E+G P+ S+ + + G+ +A + LE M SN I P
Sbjct: 408 DEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE----MLSN---GIDP- 459
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVL 180
DE+ Y SLI+ C DG V +A LL ++ + +VI Y+ +
Sbjct: 460 ----------------DEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ GL K R +A ++L ++V C + T T
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTL 537
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 46/302 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
++ + C ++ ++ + M+++G+ PD ++ C LI G + E+A
Sbjct: 80 FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPD--------VILCTKLIKGFFNMKKIEKA 131
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG- 123
++++ + + G PD ++ AV+SGF + + A + M + +++ L G
Sbjct: 132 IQVMEILEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGN 190
Query: 124 -------DVYWSLMG---KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
D+ +M K + YT LI A G + +A LLDE+ G
Sbjct: 191 FCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD 250
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-------------------LTF 214
Y+V+++G+ K+ A + L + + C + T L
Sbjct: 251 RYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMS 310
Query: 215 DTLIENCSNNEFTS---LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
D L++ C N T + L + +I +EA +VL M PDG Y+ LI
Sbjct: 311 DMLVKGCEPNPITYSTLITALCRDGKI----DEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Query: 272 CR 273
CR
Sbjct: 367 CR 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G +C +G A + DQ++ P+++T LI G +E
Sbjct: 183 TYNILIGNFCGRGRLDLALRVMDQLLKDNC--------KPTVITYTILIEATITQGGIDE 234
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNMLAI 118
A+++L M GL PD ++ VV+G + G L +A++ + + + + N+L
Sbjct: 235 AMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLR 294
Query: 119 QPLS------GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L+ G+ S M +G + + Y++LI A C DG++ +AK +L +
Sbjct: 295 DLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAP 354
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLV 201
YD LIS L ++ + A + L ++
Sbjct: 355 DGYSYDPLISALCREGKVDLAIEFLDDMI 383
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C G+ A M+ +M KG PD + T N+LI+GL + EE
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD--------IYTFNSLIYGLCKNDKMEE 495
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLA 117
AL + R M G+ +TV++ ++ F R+ +++A L EM + + N ++
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIK 555
Query: 118 IQPLSG--DVYWSLMGKQGG--LLDEVNYTS-LINAYCADGEVVKAKTLLDELTHFGDVR 172
+G + L+ + G + +N + LIN++C G+V A L ++ G
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615
Query: 173 QSVIYDVLISGLDKKARTQEA 193
V Y+ LI+GL K R QEA
Sbjct: 616 DIVTYNSLINGLCKMGRFQEA 636
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 68/326 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + +M +C E A + M G +P+ + LIH L R
Sbjct: 200 VYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY--------QMLIHALSENNRV 251
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQ--- 111
EA+++L M MG PD +F V+ G + G + +A L M D ++Q
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 112 ------------SNNMLAIQP---------------LSG------DVYWSLMGKQGGLLD 138
+ ML+ P +SG D+ + M G D
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ +I+ C G +V A LDE+ G + Y +LI G K+ +EA K++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
S+ S L+ +T+ NC + L K +I+D A + M K
Sbjct: 432 SM-------SAKGLSLNTVGYNC------LIGALCKDGKIQD----ALQMYGEMSSKGCK 474
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD +N LI C+ D ++A +Y
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLY 500
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 121/312 (38%), Gaps = 42/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD T N +I GL G
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD--------AFTFNIMIDGLCKKGYLVS 390
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
ALE L M + G P+ +++T ++ GF + G +A + M S N + L G
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + M +G D + SLI C + ++ +A L ++ G +
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT----S 228
+V Y+ LI + Q+A K++ + + C +T++ LI+ T
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC--PLDNITYNGLIKALCKTGATEKCLG 568
Query: 229 LVE----------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
L+E L+ F N+A L M+ PD YN LI C
Sbjct: 569 LIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLC 628
Query: 273 RCDNGDKAYDMY 284
+ +A +++
Sbjct: 629 KMGRFQEALNLF 640
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G+ + A MI +G PD +VT N+LI+GL GR +EAL +
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPD--------IVTYNSLINGLCKMGRFQEALNL 639
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
G+ G+ PD V++ ++S + G A L
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQL 674
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ C + AF ++ QM+ K SP TCN+LI+G G+
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAK--------RISPDDFTCNSLIYGFCIMGQL 261
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+ +L M + P +F+ +V F + G++++A +MM M
Sbjct: 262 KEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEA--------KMMLGVTM------ 307
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
K+ +LD V Y SL++ YC E+ KAK + D + G + Y +I
Sbjct: 308 ----------KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIE 219
+GL K EA + + C P +T+++LI+
Sbjct: 358 NGLCKIKMVDEAVNLFEEM---RCRKIIPNVVTYNSLID 393
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 57/305 (18%)
Query: 19 SKAFHMHDQMIHKGFLPDFVT---------------------------EFSPSLVTCNAL 51
S A +H QM G + DF T F P+ +T N L
Sbjct: 87 STALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTL 146
Query: 52 IHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMM 110
I GL G +AL + G D VS+ +++G ++G + A L +D +++
Sbjct: 147 IKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLV 206
Query: 111 QSN---------NMLAIQPLSG--DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
Q N NM + ++ D+Y ++ K+ D+ SLI +C G++ +A
Sbjct: 207 QPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS-PDDFTCNSLIYGFCIMGQLKEAV 265
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
LL ++ + + +L+ K+ + +EAK ML T+ D +++
Sbjct: 266 GLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML-----------GVTMKKDIILD 314
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
+ N L+ G+ + N+A + ++M + Y +I C+ D+
Sbjct: 315 VVTYN------SLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDE 368
Query: 280 AYDMY 284
A +++
Sbjct: 369 AVNLF 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 40/237 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y +LM YC E +KA + D M +G + + +
Sbjct: 317 TYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEM 376
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+ P++VT N+LI GLG G+ L+++ M + G P+ +++ +++ + +
Sbjct: 377 RCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHV 436
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL------------SGDVYWSLMGKQGGLLDEVNYTS 144
KA L + + +M L + V+ L+ K G LD YT
Sbjct: 437 DKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVK-GYNLDVYTYTV 495
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+I +C G A LL ++ G + + Y+++I L +K A+K+L ++
Sbjct: 496 MIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMI 552
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y L+G Y +G ++A + +++ GF PD V+
Sbjct: 225 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 284
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V+ NALI G G E+A+EILR M + + P+ VS +++ R G+
Sbjct: 285 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ- 343
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
K+++D ++ + M I+ L+ V Y S I +Y GE
Sbjct: 344 ------KVKIDTVLSAAEMRGIK-----------------LNTVAYNSAIGSYINVGEYD 380
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
KA L + + SV Y VLISG K ++ EA
Sbjct: 381 KAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 417
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y L+G Y +G ++A + +++ GF PD V+
Sbjct: 160 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 219
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V+ NALI G G E+A+EILR M + + P+ VS +++ R G+
Sbjct: 220 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ- 278
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
K+++D ++ + M I+ L+ V Y S I +Y GE
Sbjct: 279 ------KVKIDTVLSAAEMRGIK-----------------LNTVAYNSAIGSYINVGEYD 315
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
KA L + + SV Y VLISG K ++ EA
Sbjct: 316 KAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 352
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y L+G Y +G ++A + +++ GF PD V+
Sbjct: 364 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 423
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V+ NALI G G E+A+EILR M + + P+ VS +++ R G+
Sbjct: 424 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ- 482
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
K+++D ++ + M I+ L+ V Y S I +Y GE
Sbjct: 483 ------KVKIDTVLSAAEMRGIK-----------------LNTVAYNSAIGSYINVGEYD 519
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
KA L + + SV Y VLISG K ++ EA
Sbjct: 520 KAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 556
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C S + ++ +MI K PD +T N LI+G G+ +EA
Sbjct: 198 YNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITY--------NTLIYGFSILGQMKEA 249
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM--------- 115
+ +L M + P+ +F+ ++ + GE++KA ++ M + N+
Sbjct: 250 VGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDG 309
Query: 116 -LAIQPLSGDVY-WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+++ ++ Y ++ + ++G LD +Y+ +IN +C + V +A L E+ V
Sbjct: 310 CFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPN 369
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNE------- 225
+V Y+ LI GL K R +A + + H +T+ +L++ C N++
Sbjct: 370 TVTYNSLIDGLCKLGRMSDAWDFIDEM--HDRGQPANIITYSSLLDGLCKNHQVDKAITL 427
Query: 226 ---------------FTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+T LV+ L K ++RD + +LN H D +Y +I
Sbjct: 428 LTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHL----DARIYTVMIN 483
Query: 270 EHCR 273
C+
Sbjct: 484 GLCK 487
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 119/313 (38%), Gaps = 76/313 (24%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC------------- 48
Y + L+ C GE KA ++ MI +G P+ T +S + C
Sbjct: 265 VYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIAT-YSSLMDGCFSVKEVNKATYVF 323
Query: 49 ---------------NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
+ +I+G +EA+ + + M + P+TV++ +++ G ++
Sbjct: 324 NTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKL 383
Query: 94 GELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADG 153
G + A+D EM + Q N+ + Y+SL++ C +
Sbjct: 384 GRMSDAWDFIDEMHDRGQPANI------------------------ITYSSLLDGLCKNH 419
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKAR---TQEAKKMLLSLVYHLCTSSWP 210
+V KA TLL ++ + G Y +L+ GL K + QE ++LL+ YHL +
Sbjct: 420 QVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYT 479
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
+ + G +EA S+L+ M PDG Y +I
Sbjct: 480 VM--------------------INGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRA 519
Query: 271 HCRCDNGDKAYDM 283
+ DKA +
Sbjct: 520 LFENNRNDKAVKL 532
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C GE KA + H+ +I KGF ++ E V+ LI+GL G + AL +
Sbjct: 131 LIKGLCLNGEVRKALYFHNDVIAKGF---YLNE-----VSYGTLINGLCKSGETKAALSL 182
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY- 126
LR + + PD V + ++ + + YDL EM + + L +Y
Sbjct: 183 LRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTL---IYG 239
Query: 127 WSLMGKQG---GLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+S++G+ GLL+ + ++ LI+ C DGEV KA+ +L + G
Sbjct: 240 FSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPN 299
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
Y L+ G +A T F+T+ + S ++
Sbjct: 300 IATYSSLMDGCFSVKEVNKA-----------------TYVFNTIARRGVALDVQSYSVMI 342
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
GF + +EA ++ M N P+ YN LI C+ A+D
Sbjct: 343 NGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWD 391
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 106/262 (40%), Gaps = 53/262 (20%)
Query: 18 FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLF 77
F+ A QM K PD + T + LI+ + A IL + ++G
Sbjct: 71 FNIAISFSQQMELKPIQPD--------IFTLSILINCFCHLNQLNYAFSILGKILKLGYE 122
Query: 78 PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL 137
P+TV+ T ++ G GE+RKA + N+++A +G L
Sbjct: 123 PNTVTLTTLIKGLCLNGEVRKA---------LYFHNDVIA---------------KGFYL 158
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+EV+Y +LIN C GE A +LL ++ V+Y+ +I L K + +
Sbjct: 159 NEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLY 218
Query: 198 LSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWN 256
++ +P +T++TLI GF I EA +LN M N
Sbjct: 219 SEMI---VKKIYPDAITYNTLIY---------------GFSILGQMKEAVGLLNRMTLKN 260
Query: 257 DKPDGAVYNFLIVEHCRCDNGD 278
P+ VY F I+ C +G+
Sbjct: 261 VNPN--VYTFSILIDVLCKDGE 280
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 34/199 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPS-LVTCNALIHGLGFFGRAE 62
Y +L+ C G S A+ D+M +G P+ ++T ++L+ GL + +
Sbjct: 372 TYNSLIDGLCKLGRMSDAWDFIDEMHDRG---------QPANIITYSSLLDGLCKNHQVD 422
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ +L + G+ D ++T +V G + G+LR A ++ Q L
Sbjct: 423 KAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEV---------------YQVLL 467
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ Y LD YT +IN C +G +A +LL ++ G V Y+++I
Sbjct: 468 NNTYH---------LDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIR 518
Query: 183 GLDKKARTQEAKKMLLSLV 201
L + R +A K++ ++
Sbjct: 519 ALFENNRNDKAVKLIREMI 537
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 51/217 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y L+G Y +G ++A + +++ GF PD V+
Sbjct: 119 SYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMI 178
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++V+ NALI G G E+A+EILR M + + P+ VS +++ R G+
Sbjct: 179 KRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ- 237
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
K+++D ++ + M I+ L+ V Y S I +Y GE
Sbjct: 238 ------KVKIDTVLSAAEMRGIK-----------------LNTVAYNSAIGSYINVGEYD 274
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
KA L + + SV Y VLISG K ++ EA
Sbjct: 275 KAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEA 311
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 1 MAYAYVN-LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFG 59
++Y N L+ + G F++AF + D M + P++ T +++IHG+
Sbjct: 629 LSYVVYNILIAAHSKAGNFTEAFKLRDAMRS--------SNIHPTIFTYSSIIHGMCCND 680
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ 119
EEA I M GL P+ +TA++ G+ ++G++ +++ ++Q IQ
Sbjct: 681 LVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMD-------QIESILQEMTSNCIQ 733
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
P +++ YT +I+ YC G +A LL+E+ G +V Y V
Sbjct: 734 P-----------------NKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 776
Query: 180 LISGLDKKARTQEA 193
L G K+ +E
Sbjct: 777 LQKGYCKENELEET 790
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 62/309 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C G+ +AF + ++M+ +GF PD T N L+ GL G+ ++
Sbjct: 528 SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPD--------TYTYNFLMKGLADKGKMDD 579
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-------KLEM---------- 106
+L + G+ P+ ++ ++ G+ + A L K+E+
Sbjct: 580 VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIA 639
Query: 107 ---------------DEMMQSNNMLAIQPLSGDVYW----SLMGKQGGLLDEVN------ 141
D M SN I S ++ L+ + G+ +E+
Sbjct: 640 AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMP 699
Query: 142 ----YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
YT+LI YC G++ + +++L E+T + Y ++I G K T+EA K+L
Sbjct: 700 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 759
Query: 198 LSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWN 256
++ + S T+T+ L + C NE L E ++G LE + L LH +
Sbjct: 760 NEMIAN--GISPDTVTYTVLQKGYCKENE---LEETLQGDTAVPLEEITYTTLVDKLHPH 814
Query: 257 DKPDGAVYN 265
D A+ N
Sbjct: 815 S--DAALSN 821
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 51/280 (18%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ + T NAL++GL G EE + + M E GL D +S+ ++ G + G++ +A+
Sbjct: 487 LAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAF 546
Query: 101 DLKLEMDEMMQSN------------NMLAIQPLSGDVYWSLM-GKQGGLLDEV-NYTSLI 146
LK ++MM+ LA + DV L K G++ + Y ++
Sbjct: 547 KLK---EKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALML 603
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
YC + A +L ++L + V+Y++LI+ K EA K+ ++ +
Sbjct: 604 EGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM---RSS 660
Query: 207 SSWPTL-TFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEA------------------- 245
+ PT+ T+ ++I C N+ LVE KG ++ NE
Sbjct: 661 NIHPTIFTYSSIIHGMCCND----LVEEAKGI-FEEMRNEGLMPNVFCYTALIGGYCKLG 715
Query: 246 -----ASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
S+L M +P+ Y +I +C+ N +A
Sbjct: 716 QMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEA 755
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 43/207 (20%)
Query: 75 GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQG 134
G+FP S ++S + EL K++ + + M + G
Sbjct: 205 GVFPSLKSCNFLMSSLVKSNELHKSFRV------------------------FDAMCRGG 240
Query: 135 GLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAK 194
L+D Y + INAYC G++ +A L ++ G + V Y+ LI GL K R +EA
Sbjct: 241 VLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEA- 299
Query: 195 KMLLSLVYHLCTSSWPTLTFD-TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTML 253
L F ++EN N + LV G + +EA SVL M
Sbjct: 300 -----------------LMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMY 342
Query: 254 HWNDKPDGAVYNFLIVEHCRCDNGDKA 280
P+ V+N LI + R N D A
Sbjct: 343 SKGFSPNEFVFNALIDGYSRKGNMDDA 369
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 51/191 (26%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
Y Y + YC G+ +A + +M G LP+ VT
Sbjct: 245 VYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKG 304
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ +PSLVT L++GL F + +EA +L M G P+ F A++ G+ R G
Sbjct: 305 RMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKG 364
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
+ A ++ +M + ++P + V + +L+ +C +
Sbjct: 365 NMDDALRVRDDM-------TLKGLKP-----------------NAVTHNTLLQGFCRTNQ 400
Query: 155 VVKAKTLLDEL 165
+ +A+ +L+ L
Sbjct: 401 MEQAEQVLEYL 411
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 93/238 (39%), Gaps = 41/238 (17%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
PSL +CN L+ L ++ + M G+ D ++ ++ + + G++ +A L
Sbjct: 208 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 267
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
L+ MG+ G L + V Y +LI+ C G + +A
Sbjct: 268 FLK------------------------MGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFK 303
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
+ V Y +L++GL K + EA +L+ + + S
Sbjct: 304 GRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYS----------------KGFS 347
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
NEF L+ G+ + ++A V + M KP+ +N L+ CR + ++A
Sbjct: 348 PNEFV-FNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA 404
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
F V+ N + +G R AL++L+ M E G+ P V++ ++ G+FR G+L +A
Sbjct: 199 RFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEA 258
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
++ LEM K+ +D V YT++++ + GEV ++K
Sbjct: 259 WEFFLEMK------------------------KRKCEIDVVTYTTMVHGFGVAGEVKRSK 294
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLI 218
+ D + G V Y+ LI L KK Q A + +V C P L T++ +I
Sbjct: 295 RVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCV---PNLTTYNVVI 351
Query: 219 EN-CSNNEFTSLVELVK 234
C + E VE +K
Sbjct: 352 RGLCHSGEIERGVEFMK 368
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 35/201 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ + GE ++ + D M+ +G +P S+ T NALI L +
Sbjct: 276 TYTTMVHGFGVAGEVKRSKRVFDAMVKEGLVP--------SVATYNALIQVLCKKDSVQN 327
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G P+ ++ V+ G GE+ + + M M ++ M ++Q
Sbjct: 328 ALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIERGVEF---MKRMEENGCMPSVQ---- 380
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y +I YC +GE+ K L +++ + + Y++LIS
Sbjct: 381 -----------------TYNVVIRYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILISA 423
Query: 184 LDKKARTQE---AKKMLLSLV 201
+ + ++++ A K+L+ +V
Sbjct: 424 MFVRKKSEDLVLAGKLLIEMV 444
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+++ YC K +F+KA + ++ G F+P + N IH + E+AL+
Sbjct: 431 HILSIYCRKPDFNKALALSEKFQENG------VHFNP--YSYNEFIHRICRGSVPEKALQ 482
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM--------LAI 118
+L M + + PD V+++ ++S F + KA L ++M ++ + N+ L I
Sbjct: 483 LLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFI 542
Query: 119 QPLSGDVYWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
DV + L M + D++ YTSL+ +C GE+ +A+ L DE++ G V
Sbjct: 543 SDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVV 602
Query: 176 IYDVLISGLDKKARTQEAKKM 196
Y I+ K + +A K+
Sbjct: 603 TYTCFINEYLKLNKNNQAHKL 623
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNA------------ 50
Y+Y + C KA + M+ + LPD V +L++C A
Sbjct: 462 YSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVN--YSTLISCFAKRLNSEKAVMLF 519
Query: 51 -----------------LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
LI+ + + A + +GM E ++PD +++T++V+GF
Sbjct: 520 IKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNT 579
Query: 94 GELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY-----------WSLMGKQGGLLDEVNY 142
GE+ +A L EM S N++ + + M ++G D++ Y
Sbjct: 580 GEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILY 639
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAKKM 196
T LI A+C GE+ +A+ L DE+ G +V+ Y LI+ K + +A+K+
Sbjct: 640 TMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKL 694
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
NA+I+GL G +EA E+ + M G+ PD S++ ++ GF R G + +A ++ EM
Sbjct: 255 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM-- 312
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTH 167
+ G+L + +Y+ LI+ +C +G V KA + +E+ +
Sbjct: 313 -----------------------RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKN 349
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
G + Y +LI G +K A K W +T + N S + F
Sbjct: 350 SGILPDVYSYSILIDGFCRKGDMDSAIKF------------WEEMTSN----NFSPSAF- 392
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ L+KG+ A M PD N ++ +CR + +KA
Sbjct: 393 NYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKA 445
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y L+ +C KG +A + +M + G LP+ +S S+ LI G GR
Sbjct: 286 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNI---YSYSI-----LIDGFCKEGRV 337
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ALE+ M G+ PD S++ ++ GF R G++ A EM S + L
Sbjct: 338 DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 397
Query: 122 SGDVYWS-----------LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
Y S +M K G D + +++ YC + KA L ++ G
Sbjct: 398 IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGV 457
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
Y+ I + + + ++A ++L
Sbjct: 458 HFNPYSYNEFIHRICRGSVPEKALQLL 484
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 31/169 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY +L+ +C+ GE ++A + D+M +G SP++VT I+ + +
Sbjct: 568 AYTSLVAGFCNTGEMTRARALFDEMSREGC--------SPNVVTYTCFINEYLKLNKNNQ 619
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ M E G++PD + +T +++ F GE+ +A L DEM Q
Sbjct: 620 AHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEAL---FDEMKQEGRCTP------ 670
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ V YT LIN+Y + +A+ L +E+ G R
Sbjct: 671 --------------NVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSR 705
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 64/298 (21%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G +A + +M + G LPD +S S+ LI G GR ++A E+ + M
Sbjct: 262 CQGGILDEASEVFKEMKNSGILPDV---YSYSI-----LIDGFCRKGRVDQASEVFKEMR 313
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
G+ P+ S++ ++ GF + G + KA LE+ E M+++ +L DVY
Sbjct: 314 NSGILPNIYSYSILIDGFCKEGRVDKA----LEVFEEMKNSGILP------DVY------ 357
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+Y+ LI+ +C G++ A +E+T + Y LI G K +
Sbjct: 358 --------SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 409
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIEN------CSNNEFTSLVELVKGFRIR------- 239
A K ++ L WP DT+ N C +F + L + F+
Sbjct: 410 ALKE-FRIMQKL--GMWP----DTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 462
Query: 240 ------------DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
+ +A +L ML N PD Y+ LI + N +KA +++
Sbjct: 463 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFI 520
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 142/345 (41%), Gaps = 74/345 (21%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ YC KG+ +A + +++ KGFLP +L T ALI G G+ +
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLP--------TLETYGALIDGFCKAGKFQVV 294
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNMLAIQ 119
++L M MGL + F +++ ++ G + KA ++ M EM + + N+L
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINF 354
Query: 120 PLSG------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD--- 170
SG + + ++ L ++ +YT L++AYC G+ V A +L ++ GD
Sbjct: 355 SCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPD 414
Query: 171 ----------------------VRQSV----------IYDVLISGLDKKARTQEAKKML- 197
VR+ + IY+VL+SGL KK R AK +L
Sbjct: 415 LVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLS 474
Query: 198 --LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV----------------KGFRIR 239
L L + TL D I N ++ T L E+V KG
Sbjct: 475 EMLDLNLQPDAYMYATLV-DGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKC 533
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+A S +N M N PD ++ +I + + + D A M+
Sbjct: 534 GKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMF 578
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
++Y LM YC +G++ A M ++ G PD LV+ A IHG G +
Sbjct: 381 FSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPD--------LVSYGAFIHGSVAGGEID 432
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
AL + M E G+FPD + ++SG + G A KL + EM+ N +QP
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAA---KLLLSEMLDLN----LQP-- 483
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D Y +L++ + + E+ KA L + + G V Y+V+I
Sbjct: 484 ---------------DAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIK 528
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
GL K + +A +S V + I N + +E+T + + DL+
Sbjct: 529 GLCKCGKMTDA----VSYVNKM------------KIANHAPDEYTHSTVIDGYVKQHDLD 572
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ A + M+ KP+ Y LI C+ + +A ++
Sbjct: 573 S-ALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVF 613
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 45/279 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY Y L+ + E KA + + ++ KG P +V N +I GL G+
Sbjct: 485 AYMYATLVDGFIRNNELDKATELFEVVMSKGI--------DPGVVGYNVMIKGLCKCGKM 536
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A+ + M PD + + V+ G+ + +L A +
Sbjct: 537 TDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKM------------------- 577
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ M KQ + V YTSLIN +C ++ +A+ + + F V Y +LI
Sbjct: 578 -----FGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILI 632
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K + ++A ++ + C + TF LI +N T+L L++ ++
Sbjct: 633 GGFSKTGKPEKAASFFELMLMNNCLPN--DTTFHYLINGLTNITNTTL--LIE----KNE 684
Query: 242 ENEAASVLN---TMLHWNDKPDGAVYNFLIVEHCRCDNG 277
EN+ + +L+ TM+ A YN +IV C C +G
Sbjct: 685 ENDRSLILDFFATMISEGWSQVIATYNSIIV--CLCKHG 721
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 114/296 (38%), Gaps = 40/296 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y ++ Y DKGE+ K+F + +M G PD F N +I G +
Sbjct: 386 SFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPD--RHF------YNVMIDTFGKYNCL 437
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNM 115
+ A+ M G+ PDTV++ ++ + G +A +L EM + +M N M
Sbjct: 438 DHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIM 497
Query: 116 LAIQPLSGDVYW-------SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
I + W S M QG L + V YT+L++ Y G A L+ L
Sbjct: 498 --INSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSM 555
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
G S +Y+ LI+ ++ + +A + T S +
Sbjct: 556 GFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPS-----------------LLA 598
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L L+ F + EA +VL M KPD Y L+ R D K +Y
Sbjct: 599 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVY 654
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 105/273 (38%), Gaps = 49/273 (17%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+ G+ ++A H KG SP T A+I LG GR EA + +
Sbjct: 256 FSKAGDATRAMHFLAVAQGKGL--------SPKSGTLAAVILALGNSGRTIEAEALFEEI 307
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
E GL P T ++ A++ G+ + G L+ A + EM+
Sbjct: 308 KENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEME------------------------ 343
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
K G L DE Y+ L++AY G A+ +L E+ S IY +++ K Q
Sbjct: 344 KSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQ 403
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
++ ++L + + P F + ++ F + + A +
Sbjct: 404 KSFQVLKEMK---MSGVQPDRHFYNV--------------MIDTFGKYNCLDHAMATFER 446
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
ML +PD +N LI HC+ +A +++
Sbjct: 447 MLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELF 479
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 52/300 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ Y G A + +M G LPD E + SL L+ GR E
Sbjct: 318 AYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPD---EHTYSL-----LVDAYAHAGRWES 369
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP--- 120
A +L+ M L P++ ++ +++ + GE +K++ + EM M +QP
Sbjct: 370 ARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEM-------KMSGVQPDRH 422
Query: 121 ---LSGDVY------------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ D + + M +G D V + +LI+ +C G +A+ L +E+
Sbjct: 423 FYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEM 482
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE 225
G + Y+++I+ + + R + +L + L+ N
Sbjct: 483 QQSGYSPCVMTYNIMINSMGAQERWERVNDLL------------SKMQSQGLLPNAVT-- 528
Query: 226 FTSLVELV-KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+T+LV++ K R N+A L + KP +YN LI + + D+A + +
Sbjct: 529 YTTLVDIYGKSGRF----NDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAF 584
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C G S+A + ++M G+ SP ++T N +I+ +G R E ++L M
Sbjct: 466 HCKSGRHSRAEELFEEMQQSGY--------SPCVMTYNIMINSMGAQERWERVNDLLSKM 517
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
GL P+ V++T +V + + G A +E E+++S + +P S +Y +L+
Sbjct: 518 QSQGLLPNAVTYTTLVDIYGKSGRFNDA----IECLEVLKS---MGFKPTS-TMYNALIN 569
Query: 132 --KQGGLLDE-VN----------------YTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
Q GL D+ VN SLINA+ D +A +L + G
Sbjct: 570 AYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 629
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
V Y L+ L + + + + +V CT
Sbjct: 630 DVVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCT 663
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 114/296 (38%), Gaps = 40/296 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y ++ Y DKGE+ K+F + +M G PD F N +I G +
Sbjct: 386 SFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPD--RHF------YNVMIDTFGKYNCL 437
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNM 115
+ A+ M G+ PDTV++ ++ + G +A +L EM + +M N M
Sbjct: 438 DHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIM 497
Query: 116 LAIQPLSGDVYW-------SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
I + W S M QG L + V YT+L++ Y G A L+ L
Sbjct: 498 --INSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSM 555
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
G S +Y+ LI+ ++ + +A + T S +
Sbjct: 556 GFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPS-----------------LLA 598
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L L+ F + EA +VL M KPD Y L+ R D K +Y
Sbjct: 599 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVY 654
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 105/273 (38%), Gaps = 49/273 (17%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+ G+ ++A H KG SP T A+I LG GR EA + +
Sbjct: 256 FSKAGDATRAMHFLAVAQGKGL--------SPKSGTLAAVILALGNSGRTIEAEALFEEI 307
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
E GL P T ++ A++ G+ + G L+ A + EM+
Sbjct: 308 KENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEME------------------------ 343
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
K G L DE Y+ L++AY G A+ +L E+ S IY +++ K Q
Sbjct: 344 KSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQ 403
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
++ ++L + + P F + ++ F + + A +
Sbjct: 404 KSFQVLKEMK---MSGVQPDRHFYNV--------------MIDTFGKYNCLDHAMATFER 446
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
ML +PD +N LI HC+ +A +++
Sbjct: 447 MLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELF 479
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 52/300 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ Y G A + +M G LPD E + SL L+ GR E
Sbjct: 318 AYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPD---EHTYSL-----LVDAYAHAGRWES 369
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP--- 120
A +L+ M L P++ ++ +++ + GE +K++ + EM M +QP
Sbjct: 370 ARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEM-------KMSGVQPDRH 422
Query: 121 ---LSGDVY------------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ D + + M +G D V + +LI+ +C G +A+ L +E+
Sbjct: 423 FYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEM 482
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE 225
G + Y+++I+ + + R + +L + L+ N
Sbjct: 483 QQSGYSPCVMTYNIMINSMGAQERWERVNDLL------------SKMQSQGLLPNAVT-- 528
Query: 226 FTSLVELV-KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+T+LV++ K R N+A L + KP +YN LI + + D+A + +
Sbjct: 529 YTTLVDIYGKSGRF----NDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAF 584
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C G S+A + ++M G+ SP ++T N +I+ +G R E ++L M
Sbjct: 466 HCKSGRHSRAEELFEEMQQSGY--------SPCVMTYNIMINSMGAQERWERVNDLLSKM 517
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
GL P+ V++T +V + + G A +E E+++S + +P S +Y +L+
Sbjct: 518 QSQGLLPNAVTYTTLVDIYGKSGRFNDA----IECLEVLKS---MGFKPTS-TMYNALIN 569
Query: 132 --KQGGLLDE-VN----------------YTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
Q GL D+ VN SLINA+ D +A +L + G
Sbjct: 570 AYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 629
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
V Y L+ L + + + + +V CT
Sbjct: 630 DVVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCT 663
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ C F +AF + D MI G P+++T N I GL GR E
Sbjct: 421 VYTCMVDVLCQMSMFDQAFDLIDNMISDGC--------PPTVITFNNFIKGLCRAGRVEW 472
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNMLA 117
A+ +L M + P+ ++ ++ G FR R+A L E++E + N ++
Sbjct: 473 AMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMY 532
Query: 118 IQPLSG--DVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G L+GK G LD + + +NAYC G+V A +LD ++ + R
Sbjct: 533 GFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFR 592
Query: 173 QSVI-YDVLISGLDKKARTQEA 193
+I + +++ G+ T+EA
Sbjct: 593 ADIITHTIILWGICNWLGTEEA 614
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 46/244 (18%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++ T N L+ L G+ + A ++L M G PD VS+T V+S ++G++ KA
Sbjct: 175 LEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR 234
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+L ++ + ++ P+ Y +LI+ C + +A
Sbjct: 235 ELAMKFEPVV---------PV--------------------YNALIHGVCKECRFKEAFD 265
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
L++E+ G + Y +IS L + + + + C + T T
Sbjct: 266 LMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFT------- 318
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L+KGF +R +A + N M+ P+ YN LI C N D+A
Sbjct: 319 ----------SLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368
Query: 281 YDMY 284
++
Sbjct: 369 ISVW 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 116/304 (38%), Gaps = 63/304 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
+ Y L+ C G+ A + +M +KG PD V+
Sbjct: 179 VFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAM 238
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+F P + NALIHG+ R +EA +++ M + G+ P+ +S++ V+S +G + +
Sbjct: 239 KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELS 298
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
LA+ + M +G + +TSLI + G V A
Sbjct: 299 ----------------LAV--------FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAV 334
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
L + + G V Y+ LI GL EA S W + D++
Sbjct: 335 GLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA------------ISVWNQMEKDSIRP 382
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
N T+ ++ GF A N M++ +P+ VY ++ C+ D+
Sbjct: 383 N-----VTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQ 437
Query: 280 AYDM 283
A+D+
Sbjct: 438 AFDL 441
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 36/252 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ +L+ + +G A + + MI +G SP++V N LIHGL G +E
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGV--------SPNVVAYNTLIHGLCSDGNMDE 367
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + M + + P+ +++ ++ GF + G+L A +
Sbjct: 368 AISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACET--------------------- 406
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
W+ M G + V YT +++ C +A L+D + G + ++ I G
Sbjct: 407 ---WNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKG 463
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENC-SNNEFTSLVELVKGFRIRDLE 242
L + R + A +L + + C + T++ L++ N F L++ R +E
Sbjct: 464 LCRAGRVEWAMNVLDQMEKYECLPN--IRTYNELLDGLFRANAFREACGLIRELEERKVE 521
Query: 243 NEAASVLNTMLH 254
+ + NT+++
Sbjct: 522 FDCVT-YNTIMY 532
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 36/288 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ +L+ Y +G KAF ++ M+ GF +PS TCN+L+ GL G+ +E
Sbjct: 499 AFNSLIAAYSREGLEDKAFEIYHIMVKCGF--------TPSASTCNSLLMGLCRKGKLQE 550
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A +L M E G V++T + G+F++ ++ A + EM E +++A L
Sbjct: 551 ARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALID 610
Query: 122 ----SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G+V + M G + + Y SLI +C G + +A + E+ G +
Sbjct: 611 GLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLP 670
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
+ ++++I ++ + A L + H TF+ L+ + ++
Sbjct: 671 DTFTFNIIIDRFCRQGNMKSAIDAFLDM--HRIGLMPDIFTFNILV-----GGYCKAFDM 723
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
V+ A ++N M + PD YN + +C ++A
Sbjct: 724 VR----------ADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRA 761
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 32/182 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+AY +L+G +C+ G ++A + +M +G LPD T N +I G +
Sbjct: 638 FAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPD--------TFTFNIIIDRFCRQGNMK 689
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
A++ M +GL PD +F +V G+ KA+D+ + D+++ + P
Sbjct: 690 SAIDAFLDMHRIGLMPDIFTFNILVGGYC------KAFDM-VRADDIVNKMYPYGLYP-- 740
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D Y ++ YC+ ++ +A +LDEL G V +V Y+ ++
Sbjct: 741 ---------------DITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMG 785
Query: 183 GL 184
G+
Sbjct: 786 GI 787
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ L+ G +A+ + +M+ GF+P+ N+LI G GR +
Sbjct: 604 AFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAY--------NSLIGGFCNLGRMAQ 655
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL++ + M GL PDT +F ++ F R G ++ A D L+M +
Sbjct: 656 ALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRI-------------- 701
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
G + D + L+ YC ++V+A +++++ +G Y++ + G
Sbjct: 702 ----------GLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHG 751
Query: 184 LDKKARTQEAKKMLLSLV 201
+ A +L LV
Sbjct: 752 YCSVRKMNRAIAILDELV 769
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 120/331 (36%), Gaps = 79/331 (23%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y +M Y + +A ++ +M KG PD VT N + G +GR E+
Sbjct: 395 YNTMMDGYVKARDIGRASLLYKEMRIKGVPPD--------CVTFNIFVGGHYKYGRQEDW 446
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS--------NNML 116
++L + EMG F D + VS G L +A +KL D + N+++
Sbjct: 447 TKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQA--IKLLKDSLAMGLTFSVAAFNSLI 504
Query: 117 AIQPLSG------DVYWSL----------------------------------MGKQGGL 136
A G ++Y + M ++G L
Sbjct: 505 AAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFL 564
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
+ +V YT L + Y ++ A+ + E+ G V + LI GL K EA ++
Sbjct: 565 IKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEV 624
Query: 197 LLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH 254
L + L P +++LI C+ +++ K R+R L
Sbjct: 625 FLEM---LSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGL------------- 668
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
PD +N +I CR N A D ++
Sbjct: 669 ---LPDTFTFNIIIDRFCRQGNMKSAIDAFL 696
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC-NALIHGLGFFGRAE 62
Y +M YC + +KA ++ + M+ +G P+ V C N +I+GL R +
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPN---------VWCYNIIINGLCKKKRVD 269
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA+ + + M + PD V++ ++ G ++G++ + +L EM + ++ +++ L
Sbjct: 270 EAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLL 329
Query: 123 G--------DVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
D +L+ + QG + YT+LI+ C DG + A + E+ G
Sbjct: 330 HALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYH 389
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN-EFTSLV 230
Y+V+I+GL KK EA +L + + C ++++T+I S E
Sbjct: 390 ITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPD--AVSYETIIYALSEKGETVKTN 447
Query: 231 ELVKGFRIRDLENEAASVLN--TMLHWNDK 258
+L+ +R L +N T+ NDK
Sbjct: 448 KLLCAMIVRGLSKRLKKKVNMTTIADLNDK 477
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 56/275 (20%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM YC G + F + +++ G+ P+ +T LI G+ G+A EAL
Sbjct: 51 LMNCYCHTGGITFLFSILTKILKMGY--------EPNSITFTTLIKGMCLNGQAYEALLF 102
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-----------------------KL 104
+ G D VS+ +++G ++GE R A + K
Sbjct: 103 HDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKF 162
Query: 105 EMDEMMQSNNMLAIQPLSGDVY---------------------WSLMGKQGGLLDEVNYT 143
D + M+A + + +VY ++M K+G + V Y
Sbjct: 163 VTDAYRLYSEMIA-KGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYG 221
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH 203
++++ YC +V KA + + + G Y+++I+GL KK R EA + + H
Sbjct: 222 AIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM--H 279
Query: 204 LCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFR 237
+ +T++ LI+ C + ++ +ELV R
Sbjct: 280 WKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 51/265 (19%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
PS+VT L++ G IL + +MG P++++FT ++ G G+ AY
Sbjct: 41 IKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQ---AY 97
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ L D ++ G LD+V+Y L+N C GE A
Sbjct: 98 EALLFHDHVVA---------------------HGFKLDQVSYAILMNGLCKMGETRAAMQ 136
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIE 219
+L + DV V+Y +I L K +A ++ ++ +P + TF L++
Sbjct: 137 MLRKTWVNADV---VMYSTIIDSLCKGKFVTDAYRLYSEMI---AKGIFPNVYTFSILVD 190
Query: 220 N-CSNNEFTSLVELVK-------------------GFRIRDLENEAASVLNTMLHWNDKP 259
C + + + L+ G+ + + N+A ++ N M+ +P
Sbjct: 191 ALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP 250
Query: 260 DGAVYNFLIVEHCRCDNGDKAYDMY 284
+ YN +I C+ D+A +++
Sbjct: 251 NVWCYNIIINGLCKKKRVDEAMNLF 275
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 23/242 (9%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + A+ ++ +MI K SP++VT N+LI+G G+ +EA
Sbjct: 205 YSTIIDGLCKDKLVNDAYELYSEMITK--------RISPTVVTLNSLIYGYCIVGQFKEA 256
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG- 123
+LR M + PD +F +V + G++++A K + MM+ M + S
Sbjct: 257 FGLLREMVLKNINPDVYTFNILVDALCKEGKIKEA---KSGIAVMMKEGVMPDVVTYSSL 313
Query: 124 -DVY-WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D Y ++ + + +Y+ +IN +C V KA +L E+ +V Y+ LI
Sbjct: 314 MDGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 373
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIEN-CSNNEFTSLVELVKGFRI 238
GL K R A LV + S P +T+++LI+ C N+ + LVK +I
Sbjct: 374 DGLCKSGRISYA----WELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVK--KI 427
Query: 239 RD 240
+D
Sbjct: 428 KD 429
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 125/309 (40%), Gaps = 60/309 (19%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC G+F +AF + +M+ K PD + T N L+ L G+ +EA
Sbjct: 242 SLIYGYCIVGQFKEAFGLLREMVLKNINPD--------VYTFNILVDALCKEGKIKEAKS 293
Query: 67 ILRGMPEMGLFPDTV------------------------SFTAVVSGFFRIGELRKAYDL 102
+ M + G+ PD V S++ V++GF +I + KA L
Sbjct: 294 GIAVMMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSL 353
Query: 103 KLEMD------EMMQSNNMLAIQPLSGDV--YWSL---MGKQGGLLDEVNYTSLINAYCA 151
EM + + N+++ SG + W L M G D + Y SLI+A C
Sbjct: 354 FYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCK 413
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
+ V KA L+ ++ G Y++LI GL K+ R ++A+
Sbjct: 414 NHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQ----------------- 456
Query: 212 LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
+ F L+ N + ++ G + L NEA ++L+ M PD +I
Sbjct: 457 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 516
Query: 272 CRCDNGDKA 280
D ++A
Sbjct: 517 FENDKNERA 525
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 122/299 (40%), Gaps = 36/299 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC G+ AF + +++ G+ P+ +T L+ G + +EAL
Sbjct: 103 LINCYCHLGQMRFAFSIFAKILKMGY--------HPNTITLTTLVKGFCLNHKVKEALHF 154
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ +G + VS+ +++G +IGE R A + +++ + S ++ L
Sbjct: 155 HDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCK 214
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
L D Y +S M + V SLI YC G+ +A LL E+
Sbjct: 215 DKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYT 274
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-----------CSNN 224
+++L+ L K+ + +EAK + + P +T+ +L++ N
Sbjct: 275 FNILVDALCKEGKIKEAKS---GIAVMMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNA 331
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
S+V + GF + ++A S+ M PD YN LI C+ A+++
Sbjct: 332 RSYSIV--INGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWEL 388
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 41/233 (17%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++V+ + LI+ G+ A I + +MG P+T++ T +V GF ++++A
Sbjct: 93 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEAL 152
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+++LA+ G ++V+Y +LIN C GE A
Sbjct: 153 HFH---------DHVLAL---------------GFHFNQVSYGTLINGLCKIGETRAALQ 188
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+L ++ V+Y +I GL K +A ++ ++ + + TL
Sbjct: 189 MLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLN------- 241
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
L+ G+ I EA +L M+ N PD +N L+ C+
Sbjct: 242 ----------SLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCK 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A +Y ++ +C KA + +M + PD VT N+LI GL GR
Sbjct: 331 ARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTY--------NSLIDGLCKSGRI 382
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFR-------IGELRKAYDLKLEMDEMMQSNN 114
A E++ M + G D +++ +++ + I ++K D +++D M + N
Sbjct: 383 SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLD--MYTYN 440
Query: 115 MLAIQPLS-------GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
+L I L V + + +G L YT +IN C +G + +A+TLL ++
Sbjct: 441 IL-IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 499
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G V +V + +I L + + + A+K+L ++
Sbjct: 500 NGCVPDAVTCETIIRALFENDKNERAEKLLREMI 533
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 55/280 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM Y E +KA H+ + + +G +P++ + N +I+GL +E
Sbjct: 287 TYSSLMDGYFLVKEVNKAKHLFNTLSLRGV--------TPNVFSYNIMINGLCKNKMVDE 338
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + P+TV++ +++ G ++G + +D +DEM
Sbjct: 339 AVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDF---IDEMHD------------ 383
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G D + Y SL + C + +V +A LL ++ G Y +L G
Sbjct: 384 ---------RGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 184 LDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
L K R ++A+++ L YHL + + + G
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVM--------------------INGLCKEG 474
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+EA S+L+ M PDG Y +I D DKA
Sbjct: 475 FFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKA 514
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 28/230 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+ KA + HD +I KGF + V+ LI+GL G + AL++
Sbjct: 144 LINGLCLNGQIRKALYFHDHVIAKGFHLNHVSY--------GILINGLCKSGETKAALQL 195
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNML----- 116
L + + PD V + ++ + + YDL EM ++ N ++
Sbjct: 196 LEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSI 255
Query: 117 --AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
++ G+V ++M KQ D V Y+SL++ Y EV KAK L + L+ G
Sbjct: 256 LGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRG 315
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
Y+++I+GL K EA + + H T+T+++LI+
Sbjct: 316 VTPNVFSYNIMINGLCKNKMVDEAVNLFKEM--HSKDMIPNTVTYNSLID 363
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 55/280 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM Y E +KA H+ + + +G +P++ + N +I+GL +E
Sbjct: 287 TYSSLMDGYFLVKEVNKAKHLFNTLSLRGV--------TPNVFSYNIMINGLCKNKMVDE 338
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + P+TV++ +++ G ++G + +D +DEM
Sbjct: 339 AVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDF---IDEMHD------------ 383
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G D + Y SL + C + +V +A LL ++ G Y +L G
Sbjct: 384 ---------RGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 184 LDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
L K R ++A+++ L YHL + + + G
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVM--------------------INGLCKEG 474
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+EA S+L+ M PDG Y +I D DKA
Sbjct: 475 FFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKA 514
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 28/230 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+ KA + HD +I KGF + V+ LI+GL G + AL++
Sbjct: 144 LINGLCLNGQIRKALYFHDHVIAKGFHLNHVSY--------GILINGLCKSGETKAALQL 195
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNML----- 116
L + + PD V + ++ + + YDL EM ++ N ++
Sbjct: 196 LEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSI 255
Query: 117 --AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
++ G+V ++M KQ D V Y+SL++ Y EV KAK L + L+ G
Sbjct: 256 LGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRG 315
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
Y+++I+GL K EA + + H T+T+++LI+
Sbjct: 316 VTPNVFSYNIMINGLCKNKMVDEAVNLFKEM--HSKDMIPNTVTYNSLID 363
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++V+CN L+ L E A+++L MP MGL P+ VS+T V+ GF G++ A +
Sbjct: 189 PNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKV 248
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
E+ D WS D +YT L++ +C G++V A ++
Sbjct: 249 FREVL----------------DRGWS--------PDVTSYTVLVDGFCRLGKLVDAIRVM 284
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH--LCTSSWPTLTFDTLIEN 220
D + G V Y V+I K+ ++ EA ++ ++ + S D L
Sbjct: 285 DIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLL--- 341
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHW 255
C E+ + ++ A V++T++HW
Sbjct: 342 CEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHW 376
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 40/278 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++G + +G+ A + +++ +G+ PD VT ++ L+ G G+ +
Sbjct: 228 SYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPD-VTSYT-------VLVDGFCRLGKLVD 279
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM---DEMMQSNNMLAIQP 120
A+ ++ M + G+ P+ V++ ++ + + + +A +L +M D ++ S +
Sbjct: 280 AIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVD 339
Query: 121 L---SGDV-----YWSLMGKQG-GLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L G+V W ++ ++ GL V ++LI+ C G+V++A+ + DE G V
Sbjct: 340 LLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK-GSV 398
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLV 230
+ Y+ LI+GL + EA ++ +D ++E + N FT +
Sbjct: 399 ASLLTYNTLIAGLCEGGELCEAARL-----------------WDDMVEKGVAPNAFTYNM 441
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
L+KGF E VL ML P+ + Y LI
Sbjct: 442 -LIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILI 478
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 34/237 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ +C K + + + M ++M G PD +VT N L+ LG G
Sbjct: 456 HCYNVLISGFCKKKKLERVYEMLNEMEENGVKPD--------IVTYNTLVSYLGKAGDFA 507
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
A ++++ M + GL P V++ AV+ AY LK +DE M+
Sbjct: 508 TATKVMKKMIKEGLKPSVVTYGAVIH----------AYCLKKNIDEAMK----------- 546
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
++ + + V Y LI+A C + +V +A +L+D++ G + Y+ +
Sbjct: 547 --IFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFK 604
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSN-NEFTSLVELVKGFRI 238
G+ K +A +++ +V C + +T + L E S E L VKG R+
Sbjct: 605 GVQDKRMLHKAFELMDRMVEDACNPDY--VTMEILTEWLSAIGEIEKLKLFVKGHRV 659
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 43/295 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G KA + M + + P++VT N L+ G+ GR
Sbjct: 317 TYNCLIDGFCKAGNIDKARELFGLMNEE--------QIQPNVVTLNTLVDGMCKIGRVFS 368
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN---------- 113
A+E M GL + V++TA++S F + + KA DEM+ S
Sbjct: 369 AVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQY---FDEMLSSGCSPDAIVYYC 425
Query: 114 --NMLAIQPLSGD--VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ L I GD V S + + G LD Y LI+ +C ++ + +L+E+ G
Sbjct: 426 LISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENG 485
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
V Y+ L+S L K A K++ ++ S +T+ +I
Sbjct: 486 VKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPS--VVTYGAVIH---------- 533
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWN-DKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ ++ +EA + M + P+ +YN LI C+ ++ ++A +
Sbjct: 534 -----AYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSL 583
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ +C KA D+M+ G PD + + LI GL GR
Sbjct: 385 AVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYY--------CLISGLTIAGRM 436
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNM 115
+A ++ + G D + ++SGF + +L + Y++ EM+E ++ N +
Sbjct: 437 GDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTL 496
Query: 116 LAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
++ +GD + M K+G V Y ++I+AYC + +A + E+
Sbjct: 497 VSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSM 556
Query: 171 V-RQSVIYDVLISGLDKKARTQEAKKML 197
V +VIY++LI L K + A ++
Sbjct: 557 VPPNTVIYNILIDALCKNNDVERAVSLM 584
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 68/306 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
Y + L+ +C +G +A ++ M+ +G P VT
Sbjct: 177 VYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFN 236
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
SP + + + LI+G +EA+E+L+ M + P+ V++++++ G + G
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSG 296
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
++ A L EM + Q N+ V Y+S+++A C + +
Sbjct: 297 KISYALKLVDEMHDRGQPPNI------------------------VTYSSILDALCKNHQ 332
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
V A LL ++ + G Y +LI GL + + ++A+K+
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE---------------- 376
Query: 215 DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
D L++ + N +T V +++GF + L +EA ++L+ M P+ Y +I+ +
Sbjct: 377 DLLVKGHNLNVYTYTV-MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKK 435
Query: 275 DNGDKA 280
D + A
Sbjct: 436 DENEMA 441
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 31/233 (13%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P+LV CN LI+ G A +L + +MG P+T++ ++ G G++ +
Sbjct: 93 IKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKH 152
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ ++ + + N + ++ ++ DVY +T L++ +C +G V +AK
Sbjct: 153 CIVGKLKDAVDLFNKMILENINPDVY--------------TFTILVDGFCKEGRVKEAKN 198
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+L + G V Y+ L+ G + +AK + F+T+ +
Sbjct: 199 VLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSI-----------------FNTMAQL 241
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ + S L+ GF + +EA +L M H P+ Y+ LI C+
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCK 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C +A + +M HK +P+ +VT ++LI GL G+
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQIIPN--------VVTYSSLIDGLCKSGKISY 300
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
AL+++ M + G P+ V++++++ + ++ A L +M NM L
Sbjct: 301 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIK 360
Query: 122 ----SGD------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SG V+ L+ K G L+ YT +I +C G +A TLL ++ G +
Sbjct: 361 GLCQSGKLEDARKVFEDLLVK-GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+ Y+++I L KK + A+K+L ++
Sbjct: 420 PNAKTYEIIILSLFKKDENEMAEKLLCEMI 449
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 40/290 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C GE A + ++ K PD +V N +I G+ +
Sbjct: 9 GYGTLINGLCKVGETKAALELLRRVDGKLVQPD--------VVMYNTIIDGMCKDKHVND 60
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A ++ M +FPD ++ A++SGF +G+L+ A DL +M + + L
Sbjct: 61 AFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVD 120
Query: 122 ----SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G+V ++M KQG + V Y+SL++ YC EV AK + ++ G
Sbjct: 121 AFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTA 180
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLV 230
Y+++I+G K T EA + + H C P +T+++LI C + + + +
Sbjct: 181 NVWSYNIMINGFCKIKMTDEAMNLFEEM--H-CRKLIPDVVTYNSLINGLCKSGKISYAL 237
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+LV + M PD Y+ L+ C+ DKA
Sbjct: 238 KLV----------------DEMHDRGQPPDIITYSSLLDALCKNHQVDKA 271
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 126/311 (40%), Gaps = 37/311 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ +C G+ A + ++M K +P++ T N L+ G
Sbjct: 77 VFTYNALISGFCIVGKLKDATDLFNKMTSK--------NINPTVYTFNILVDAFCKEGNV 128
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP- 120
+EA +L M + G+ P+ V++++++ G+ + E+ A + M + N+ +
Sbjct: 129 KEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIM 188
Query: 121 LSGDVYWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
++G + + L +E V Y SLIN C G++ A L+DE+ G
Sbjct: 189 INGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQ 248
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT----------------- 213
+ Y L+ L K + +A +L +L + T T
Sbjct: 249 PPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 308
Query: 214 -FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
F+ L+ N + ++ GF + L +EA ++L+ M + P+ Y +I
Sbjct: 309 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLF 368
Query: 273 RCDNGDKAYDM 283
D DKA ++
Sbjct: 369 DNDENDKAENL 379
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 42/291 (14%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ Y GE + AF + +++ G+ P+ +T + LI+G+ G+ +EAL
Sbjct: 53 LINCYGHLGEITFAFSIFAKILKLGY--------HPTTITFSTLINGMCLKGKLKEALHF 104
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ +G D VS+ A++SG +IGE R A + +++ + + N+ L
Sbjct: 105 HDDVIGLGFHLDQVSYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCK 164
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV- 175
+ L + Y +S M + + V +SLI +C G++ +A L E+ ++ ++
Sbjct: 165 EKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEML-LKNINPNIY 223
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIEN-CSNNEFTSLVELV 233
+ +LI L K+ + +EAK ++ ++ PT +T++TL++ C +NE
Sbjct: 224 TFTILIDALCKEGKIKEAKNVIAVMMKE---GVEPTVVTYNTLMDGYCLDNEV------- 273
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N+A +V N + P+ Y +I C+ D+A + +
Sbjct: 274 ---------NKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFF 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 35/287 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C +G+ +A ++ M+ +G P++VT N L+ G
Sbjct: 223 YTFTILIDALCKEGKIKEAKNVIAVMMKEGV--------EPTVVTYNTLMDGYCLDNEVN 274
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD---EMMQSNNMLAIQ 119
+A + + + + P+ S+T +++G +I + +A + EM + ++++
Sbjct: 275 KAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEPNTVTYSSLIDAL 334
Query: 120 PLSGDV--YWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS 174
SG + W L M +G + + Y SL++A C + +V KA L+ ++ G
Sbjct: 335 CKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNI 394
Query: 175 VIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
Y++LI GL K+ R + A+ + L+ W T++T+I
Sbjct: 395 NTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVW---TYNTMIN-------------- 437
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
G + L +EA ++L M PD Y +I + D DKA
Sbjct: 438 -GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDKA 483
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 131/347 (37%), Gaps = 101/347 (29%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ L+ C KG+ +A H HD +I GF D V+ ALI GL G
Sbjct: 84 TFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSY--------GALISGLCKIGETRA 135
Query: 64 ALEILR-----------------------------------GMPEMGLFPDTVSFTAVVS 88
AL++LR M + P+ V+ ++++
Sbjct: 136 ALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIY 195
Query: 89 GFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDV-----YWSLMGKQGGLL 137
GF +G+L++A+ L EM + N+ L G + ++M K+G
Sbjct: 196 GFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEP 255
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA---- 193
V Y +L++ YC D EV KAK + + + Y ++I+GL K EA
Sbjct: 256 TVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFF 315
Query: 194 KKM--------LLSLVYHLCTS-----SWPTL-------------TFDTLIEN-CSNNEF 226
K+M SL+ LC S +W L T+++L+ C N++
Sbjct: 316 KEMHCEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQV 375
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ LVK + + ++ P+ YN LI C+
Sbjct: 376 DKAIALVKKIKDQGIQ----------------PNINTYNILIDGLCK 406
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C + + KA ++ + M+ K + +P+++T + L++G
Sbjct: 348 VYTFTILVDAFCKEEKIDKANYVLNVMMEK--------DVTPNVITYSCLLYGYCLVNEV 399
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA I + M + G+ D +S+T ++S F +I K D ++ E MQS +
Sbjct: 400 NEAKRIFKSMTQRGVTFDVLSYTIMISKFCKI----KMVDEARKLFEEMQSKQIFP---- 451
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D V Y+SL++ C + A L+DE+ G Y ++
Sbjct: 452 ----------------DVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSIL 495
Query: 182 SGLDKKARTQEAKKMLLSL--------VYH-------LCTS-----SWPTLTFDTLIENC 221
L KK + +EA ++ VY LC + +W F+ L+ N
Sbjct: 496 DALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWE--VFEDLLVNS 553
Query: 222 SN---NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
N N++T V ++ GF + L +EA ++L+ M + PD Y +I D
Sbjct: 554 YNHNRNKYTWTV-MIHGFCRKGLFDEALTLLSNMKDNSCIPDTVTYKTIISSLLDKGEKD 612
Query: 279 KAYDM 283
KA +
Sbjct: 613 KARKL 617
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 118/281 (41%), Gaps = 51/281 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C + AF ++ +M+ K SP+++T N L+HGL G+ ++A
Sbjct: 211 YNVLIDRMCKDKLVNVAFDLYYEMLAK--------RISPNVITYNTLLHGLCIVGQLKDA 262
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + + M + P +F +V GF + G+++ A
Sbjct: 263 ISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDA------------------------K 298
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISG 183
V ++M K G L+ V Y++LI +C G++ +A L +++ G V +V + +L+
Sbjct: 299 VVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMI-LGKVNPNVYTFTILVDA 357
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
K+ + +A Y L +T + + +C L+ G+ + + N
Sbjct: 358 FCKEEKIDKAN-------YVLNVMMEKDVTPNVITYSC----------LLYGYCLVNEVN 400
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + +M D Y +I + C+ D+A ++
Sbjct: 401 EAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLF 441
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 114/288 (39%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC KGE + +D+++ GF + ++ LI+ L G EAL++
Sbjct: 144 LINGYCLKGENDELLRFYDKVVGLGF--------QLNQISYGTLINKLCKGGETREALQL 195
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
LR + + P V + ++ + + A+DL EM S N++ L
Sbjct: 196 LRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCI 255
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+ +M + + L++ +C +G+V AK +L + G +V
Sbjct: 256 VGQLKDAISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVT 315
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y LI G + +EA + F+ +I N + LV F
Sbjct: 316 YSTLIRGFCIVGKLKEAVDL-----------------FNKMILGKVNPNVYTFTILVDAF 358
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ ++A VLN M+ + P+ Y+ L+ +C + ++A ++
Sbjct: 359 CKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAKRIF 406
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 49/236 (20%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
P+LVT N L++ G+ A +L + ++G PD V+F +++G Y
Sbjct: 100 KPNLVTFNILLNCYSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLING----------YC 149
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
LK E DE+++ ++ + G L++++Y +LIN C GE +A L
Sbjct: 150 LKGENDELLR--------------FYDKVVGLGFQLNQISYGTLINKLCKGGETREALQL 195
Query: 162 LDELTHFGDVRQS--VIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS--SWPTLTFDTL 217
L ++ G + Q V+Y+VLI + K A L Y + S +T++TL
Sbjct: 196 LRQVD--GKLVQPHVVMYNVLIDRMCKDKLVNVA----FDLYYEMLAKRISPNVITYNTL 249
Query: 218 IENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ G I +A S+ M+ N P +N L+ C+
Sbjct: 250 LH---------------GLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCK 290
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G+ A + M+ G + VT + LI G G+
Sbjct: 278 VYTFNILVDGFCKEGKVKDAKVVLAVMMKAGV--------KLNAVTYSTLIRGFCIVGKL 329
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA-YDLKLEMDEMMQSNNM----- 115
+EA+++ M + P+ +FT +V F + ++ KA Y L + M++ + N +
Sbjct: 330 KEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCL 389
Query: 116 -----LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
L + + M ++G D ++YT +I+ +C V +A+ L +E+
Sbjct: 390 LYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQI 449
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
V Y L+ GL K R A K++
Sbjct: 450 FPDVVTYSSLVDGLCKSERIPNALKLV 476
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 24 MHDQMIHKGFLPDFVT---------------------------EFSPSLVTCNALIHGLG 56
++DQM+ +GFL D T SP T N ++H LG
Sbjct: 298 VYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLG 357
Query: 57 FFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM------- 109
G +A+E+L M E G+ P V FT ++ G R G L + EM +
Sbjct: 358 RGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVV 417
Query: 110 ----MQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M + ++A++ + M +G + + Y S+I +C G+ +A ++L E+
Sbjct: 418 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEM 477
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G V+Y L++ L K + A+K+L ++
Sbjct: 478 ETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMM 513
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY ++ Y EF KA M D+MI +G +P+ + T N++I G G+ +E
Sbjct: 418 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPN--------VFTYNSMIRGFCMAGKFDE 469
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L+ M G P+ V ++ +V+ + G+L +A + +M M + N+ + L
Sbjct: 470 ACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQM--MEKGRNVHHLPKLRA 527
Query: 124 DVY 126
Y
Sbjct: 528 RRY 530
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 24 MHDQMIHKGFLPDFVT---------------------------EFSPSLVTCNALIHGLG 56
++DQM+ +GFL D T SP T N ++H LG
Sbjct: 274 VYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLG 333
Query: 57 FFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM------- 109
G +A+E+L M E G+ P V FT ++ G R G L + EM +
Sbjct: 334 RGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVV 393
Query: 110 ----MQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M + ++A++ + M +G + + Y S+I +C G+ +A ++L E+
Sbjct: 394 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEM 453
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G V+Y L++ L K + A+K+L ++
Sbjct: 454 ETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMM 489
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY ++ Y EF KA M D+MI +G +P+ + T N++I G G+ +E
Sbjct: 394 AYTVMITGYVVALEFEKAQKMFDKMISRGQIPN--------VFTYNSMIRGFCMAGKFDE 445
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L+ M G P+ V ++ +V+ + G+L +A + +M M + N+ + L
Sbjct: 446 ACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQM--MEKGRNVHHLPKLRA 503
Query: 124 DVY 126
Y
Sbjct: 504 RRY 506
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 48/295 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + +M + PD +VT NAL++G+ GR +
Sbjct: 239 TYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPD--------VVTLNALVNGMCKIGRVDS 290
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E M GL + V++TA++SGF + + KA DEM+ S P
Sbjct: 291 AVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQY---FDEMLSS----GCSP-DT 342
Query: 124 DVYWSLMG-------------KQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
VY+SL+ KQ GL LD Y +L++ + ++ + +L+++
Sbjct: 343 IVYYSLISSLTIARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIE 402
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
+V Y+ L+S L K + A KM+ +IE +
Sbjct: 403 VKPDTVTYNTLVSYLGKAGDSATATKMM-----------------KEMIEEGFEPSVFAY 445
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWN-DKPDGAVYNFLIVEHCRCDNGDKAYDM 283
++ + ++ EA + M + +P+ +Y LI C+ +N +KA +
Sbjct: 446 GAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSL 500
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 46/226 (20%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++VT N LI L G ++ E+ M E + PD V+ A+V+G +IG + A +
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVE- 293
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+++ M +G + V YT+LI+ +C +VKA
Sbjct: 294 -----------------------FFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYF 330
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
DE+ G +++Y LIS L A++M LS + + L D
Sbjct: 331 DEMLSSGCSPDTIVYYSLISSLTI------ARRMDLSQLKQV------GLGLDR------ 372
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
T L+ GFR + + + +LN M KPD YN L+
Sbjct: 373 ----TCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLV 414
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 43/275 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--PSLV------------- 46
A Y L+ +C KA D+M+ G PD + +S SL
Sbjct: 307 AVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLISSLTIARRMDLSQLKQV 366
Query: 47 ------TC-NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
TC AL+ G + E+ E+L M E+ + PDTV++ +VS + G+ A
Sbjct: 367 GLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATA 426
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG----LLDE-----------VNYTS 144
+ M EM++ ++ ++ + K G + +E V YT
Sbjct: 427 TKM---MKEMIEEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTI 483
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LI+A C V KA +L+ ++ + IY+V++ GL K +A +++ +V
Sbjct: 484 LIDALCKTNNVEKAVSLMGDMKLKSVRPNTTIYNVILKGLWDKRMLHKAFELMDRMVEDA 543
Query: 205 CTSSWPTLTFDTLIENCSN-NEFTSLVELVKGFRI 238
C+ +T + L E S E L V+G+++
Sbjct: 544 CSPD--HVTMEILTEWLSAVGEIEKLKLFVEGYQV 576
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C G +A + + M +K F+P++ +L++G G+
Sbjct: 220 YVFGCLLDALCKNGSVKEAASLFEDMRYK---------FTPTVKHFTSLLYGWCKEGKLV 270
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD----EMMQSNNMLAI 118
EA +L M + G+ PD V F ++ G+ + G++ AYDL EM E ++ + I
Sbjct: 271 EAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLI 330
Query: 119 QPLSGD-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
Q L + M + G +D + YT+LI+ +C G++ + LLD++ G
Sbjct: 331 QSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHS 390
Query: 172 RQSVIYDVLISGLDKKARTQEAKKML 197
+ Y ++ +KK +E +++
Sbjct: 391 PNQLTYMHIMVAHEKKEELEECMELV 416
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 57/290 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+V LM + SKA + D+M P + E + C L+ L G +EA
Sbjct: 187 FVILMRRFASARMVSKAIEVLDEM------PKYGCEVDEYVFGC--LLDALCKNGSVKEA 238
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M P FT+++ G+ + G+L +A + ++M + I+P
Sbjct: 239 ASLFEDM-RYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDA-------GIEP---- 286
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
D V + +L+ Y G++ A LL E+ G + Y VLI L
Sbjct: 287 -------------DIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSL 333
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI---------------------ENCSN 223
K + +EA +M + + C +T+ TLI E S
Sbjct: 334 CKHEKLEEAMRMFVEMQRSGCQMD--VITYTTLISGFCKWGKIKRGYELLDQMKQEGHSP 391
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
N+ T + +V + +LE E ++N M PD +YN +I C+
Sbjct: 392 NQLTYMHIMVAHEKKEELE-ECMELVNEMQKIGCVPDLNIYNIVIRLACK 440
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 47/219 (21%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ CD G +A D M +GFLPD +V+ +A I GL + A++I
Sbjct: 526 LVKELCDHGRVIEACEFLDNMTQQGFLPD--------IVSYSAAIGGLVNIQEVDHAMKI 577
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ + G PD V F ++ G ++ +A DL E
Sbjct: 578 FKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHE---------------------- 615
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+ K+G V Y I+ +C +G V KA L +T V V Y L+ G K+
Sbjct: 616 --LVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKE 673
Query: 188 ARTQEA----KKM-----------LLSLVYHLCTSSWPT 211
R +A K+M ++L+Y LC PT
Sbjct: 674 ERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPT 712
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 121/320 (37%), Gaps = 72/320 (22%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y ++ YC+ F +A ++ +M KG++ + V C+ + G +
Sbjct: 186 YTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERV---------CSMMALCFSKLGEVD 236
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A E++ M E G+ +F ++ GF + + KA L D+M + ++ +
Sbjct: 237 KAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQL---FDKMRREDS------FT 287
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV------- 175
DV SL Y LI C + + +A +L E+ FG VR +
Sbjct: 288 PDV--SL------------YDVLIGGLCKNKDTDRAISLFSEMKEFG-VRPDIGILTKLI 332
Query: 176 -----------------------------IYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
IY+ L++ EA +++ ++ +
Sbjct: 333 SCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSS 392
Query: 207 SSWPTLTFDTLIENCSNNEF---TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAV 263
+ D + F TS ++ GF D + A S+ N M + DKP +
Sbjct: 393 TDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILI 452
Query: 264 YNFLIVEHCRCDNGDKAYDM 283
YN LI C+ + +K+Y++
Sbjct: 453 YNNLIDSLCKSNRLEKSYEL 472
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 58/265 (21%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + L+ C KG +A H HD+++ +GF D V+ LI+GL GR
Sbjct: 131 AITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD--------QVSYGTLINGLCKVGRI 182
Query: 62 EEALEILR-----------------------------------GMPEMGLFPDTVSFTAV 86
AL++L+ M + PD ++ A+
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGG 135
+SGF + +L A DL +M + + N+ L V ++M K
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
D V Y SL++ YC+ +V KAK + D + G + IY +++G K EA
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 196 MLLSLVYHLCTSSWP-TLTFDTLIE 219
+ + C P +T+ +LI+
Sbjct: 363 LFEEM---RCRKIIPNVVTYSSLID 384
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G+ + A +++ + D + P +VT N+L+ G +
Sbjct: 271 VYTFNILVDGFCKEGKVNDA-----KVVLAIMMKD---DIKPDVVTYNSLMDGYCSINKV 322
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A +I M G+ + +T +V+GF +I + +A +L EM N++ L
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 122 S------GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G ++++L M +G + V Y+S+++A C + V KA LL L G
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y +LI GL + R ++A+ + F+ L+ N + +
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNV-----------------FEDLLVKGYNLDVYAYT 485
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+++GF + ++A ++L+ M P+ Y +I+ D D A
Sbjct: 486 VMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTA 535
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 49/277 (17%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + G S +F + +++ KG+ P+ +T N LI GL G +AL
Sbjct: 102 LINCFSQLGLNSLSFSIFAKILKKGY--------HPTAITFNTLIKGLCLKGHIHQALHF 153
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ G D VS+ +++G ++G + A L +D + +QP
Sbjct: 154 HDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL-------VQP------- 199
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+ V Y +I+ C V A L ++ Y+ LISG
Sbjct: 200 ----------NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAV 249
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAAS 247
++ A + + EN + N +T + LV GF N+A
Sbjct: 250 SKLNYAIDLFNKMKK----------------ENINPNVYTFNI-LVDGFCKEGKVNDAKV 292
Query: 248 VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VL M+ + KPD YN L+ +C + +KA D++
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 58/265 (21%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A + L+ C KG +A H HD+++ +GF D V+ LI+GL GR
Sbjct: 131 AITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD--------QVSYGTLINGLCKVGRI 182
Query: 62 EEALEILR-----------------------------------GMPEMGLFPDTVSFTAV 86
AL++L+ M + PD ++ A+
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNAL 242
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGG 135
+SGF + +L A DL +M + + N+ L V ++M K
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
D V Y SL++ YC+ +V KAK + D + G + IY +++G K EA
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 196 MLLSLVYHLCTSSWP-TLTFDTLIE 219
+ + C P +T+ +LI+
Sbjct: 363 LFEEM---RCRKIIPNVVTYSSLID 384
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G+ + A +++ + D + P +VT N+L+ G +
Sbjct: 271 VYTFNILVDGFCKEGKVNDA-----KVVLAIMMKD---DIKPDVVTYNSLMDGYCSINKV 322
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A +I M G+ + +T +V+GF +I + +A +L EM N++ L
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 122 S------GDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G ++++L M +G + V Y+S+++A C + V KA LL L G
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y +LI GL + R ++A+ + F+ L+ N + +
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNV-----------------FEDLLVKGYNLDVYAYT 485
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+++GF + ++A ++L+ M P+ Y +I+ D D A
Sbjct: 486 VMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTA 535
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 49/277 (17%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + G S +F + +++ KG+ P+ +T N LI GL G +AL
Sbjct: 102 LINCFSQLGLNSLSFSIFAKILKKGY--------HPTAITFNTLIKGLCLKGHIHQALHF 153
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ G D VS+ +++G ++G + A L +D + +QP
Sbjct: 154 HDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL-------VQP------- 199
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+ V Y +I+ C V A L ++ Y+ LISG
Sbjct: 200 ----------NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAV 249
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAAS 247
++ A + + EN + N +T + LV GF N+A
Sbjct: 250 SKLNYAIDLFNKMKK----------------ENINPNVYTFNI-LVDGFCKEGKVNDAKV 292
Query: 248 VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
VL M+ + KPD YN L+ +C + +KA D++
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 42/251 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE--------------------------- 40
L+ C KG+ +A HD+++ GF + V+
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++V N +I + EA ++ M G+ PD V++ A++SGF +G+++ A
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 101 DLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAY 149
DL +M + N+ L ++M KQG D Y SL++ Y
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C EV KAK + + ++ G Y ++I G K + EA + + H C +
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM--H-CNNII 384
Query: 210 P-TLTFDTLIE 219
P +T+++LI+
Sbjct: 385 PDVVTYNSLID 395
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 138/322 (42%), Gaps = 59/322 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
+ + ++G +S +H QM G D V
Sbjct: 73 FQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAK 132
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+ P+++T LI GL G+ +AL+ + +G + VS+ +++G ++G+
Sbjct: 133 ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQ 192
Query: 96 LRKAYDLKLEMD-EMMQSN---------NMLAIQPLSG--DVYWSLMGKQGGLLDEVNYT 143
A L +D +++Q N +M ++ ++ D+Y ++ K G D V Y
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYN 251
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVY 202
+LI+ +C G++ A L +++ F ++ +V +++L+ G K+ R +EAK +L ++
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMI-FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK 310
Query: 203 HLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
T+++L++ LV+ V N+A + NT+ P+
Sbjct: 311 QGIKPD--VFTYNSLMDR------YCLVKEV---------NKAKHIFNTISQRGVNPNIH 353
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
Y+ +I C+ D+A +++
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLF 375
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 40/239 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDF------------------------ 37
+ Y +LM YC E +KA H+ + + +G P+
Sbjct: 317 VFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFK 376
Query: 38 ---VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
P +VT N+LI GL G+ AL+++ M + G+ D +++ +++ +
Sbjct: 377 EMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNH 436
Query: 95 ELRKAYDLKLEM-DEMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNY 142
++ KA L +M DE +Q + + G V+ L+ K G +LD Y
Sbjct: 437 QVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVK-GYILDVNIY 495
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
T++I +C+ G ++ LL ++ G + +V Y+++I L K +A+K+L ++
Sbjct: 496 TAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMI 554
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 117/297 (39%), Gaps = 50/297 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C + +A ++ M+ +G PD + T N+L+
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPD--------VFTYNSLMDRYCLVKEV 333
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A I + + G+ P+ S++ ++ GF +I ++ +A +L EM NN++
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM----HCNNIIP---- 385
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D V Y SLI+ C G++ A L+DE+ G + Y+ ++
Sbjct: 386 ----------------DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Query: 182 SGLDKKARTQEAKKML---------------LSLVYHLCTSSW---PTLTFDTLIENCSN 223
L K + +A +L +LV LC + + F+ L+
Sbjct: 430 DALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ +++GF L +E+ +L+ M P+ Y +I D DKA
Sbjct: 490 LDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKA 546
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 98/242 (40%), Gaps = 41/242 (16%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------------EFSPS 44
+C G +AF + QM+ K P+ T P
Sbjct: 243 FCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPD 302
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
+VT N+L+ G +A +L + MG+ PD S+ +++GF +I + +A L
Sbjct: 303 VVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFN 362
Query: 105 EMDEMMQSNNMLAIQPL------SGDV--YWSL---MGKQGGLLDEVNYTSLINAYCADG 153
EM S N + L SG + W L M G D Y+SLI+A C +
Sbjct: 363 EMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNN 422
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM---LLSLVYHLCTSSWP 210
+ KA L+ ++ G Y++LI GL K R + A+ + LL+ Y L ++
Sbjct: 423 HLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYN 482
Query: 211 TL 212
L
Sbjct: 483 IL 484
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 38/285 (13%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC E + AF + +++ G+ PD +T N L+ G G+ +EAL +
Sbjct: 103 YCHLREINFAFSLFGKILKMGYQPD--------TITLNTLVKGFCLNGKVKEALHFHDRV 154
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAIQPLS 122
+G + V++ +++G ++GE R A + ++D + + ++ L L
Sbjct: 155 LALGFQLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLV 214
Query: 123 GDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
D Y +S M + D V + SLI +C G + +A L ++ +++L
Sbjct: 215 IDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNIL 274
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L K+ + AK L ++ S P +T+++L++ G+ +
Sbjct: 275 VDALCKEGNVKGAKNALAMMIK---GSIKPDVVTYNSLMD---------------GYCLV 316
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ N+A VL+T+ PD YN +I C+ ++A ++
Sbjct: 317 NEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLF 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ + G PD + N +I+G E
Sbjct: 305 TYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSY--------NIMINGFCKIKMVNE 356
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M + P+TV++ +++ G + G + A+ L EM Q ++ L
Sbjct: 357 ALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLID 416
Query: 124 --------DVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
D +L+ K QG + Y LI+ C G + A+ + +L G
Sbjct: 417 ALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSL 476
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
Y++LI+GL K+ +A+ +L
Sbjct: 477 NIRTYNILINGLCKEGLFDKAEALL 501
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 41/231 (17%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
PS+VT +I+ A + + +MG PDT++ +V GF G++++A
Sbjct: 91 PSIVTLGIVINCYCHLREINFAFSLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHF 150
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+ +LA+ G L++V Y +LIN C GE A +L
Sbjct: 151 ---------HDRVLAL---------------GFQLNQVTYATLINGLCKMGETRAALQVL 186
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
++ V+Y ++I L K +A ++ ++ T S +TF++LI
Sbjct: 187 RKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEMIAK--TISPDVVTFNSLIY--- 241
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
GF I EA + + M+ N P+ +N L+ C+
Sbjct: 242 ------------GFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCK 280
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +G +A +M M+ +G +PD VT S L+ G + +A +
Sbjct: 215 LVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTS--------LMDGYCLVNQVNKAKHV 266
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
+ + + PD S+T +++G +I + +A +L EM NM+ L
Sbjct: 267 FNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNL---FKEMHCEPNMVTYSSLIDGLCK 323
Query: 122 SGDVY--WSLMGK----QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
SG V W L+ K +G ++ + Y SL++A C + V KA L+ ++ G
Sbjct: 324 SGRVSHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMT 383
Query: 176 IYDVLISGLDKKARTQEAK 194
Y++LI GL K+ R + A+
Sbjct: 384 TYNILIDGLCKEGRLRNAQ 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 87/343 (25%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC GE + AF + +++ G F P++VT LI G AL++LR +
Sbjct: 114 YCHLGEINFAFSLLGKILKFG--------FQPNIVTLTTLIK-----GETRAALQMLRKI 160
Query: 72 PEMGLFPDTVSFTAVVS-----GFFRIGELRKAYDLKLEM------DEMMQSNNMLAIQP 120
+ D V +TA++ F + ++A+ L EM + SN ++
Sbjct: 161 EGKLVNTDVVMYTAIIDMLSFMAFAWLVNSKQAFGLFHEMVLTNILPNVYTSNILVDALC 220
Query: 121 LSGDVYW-----SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
G+V ++M KQG + D V YTSL++ YC +V KAK + + L
Sbjct: 221 KEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVH 280
Query: 176 IYDVLISGLDKKARTQEAKKMLL------------SLVYHLCTS-----SWPTL------ 212
Y ++I+GL K EA + SL+ LC S +W L
Sbjct: 281 SYTIIINGLCKIKMVDEALNLFKEMHCEPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDD 340
Query: 213 --------TFDTLIEN-CSNNEFTSLVELVKGFRIRDLE--------------------- 242
T+++L+ C N+ + LVK + + +E
Sbjct: 341 RGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRN 400
Query: 243 -----NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+EA ++L+ M PD Y +I + D DKA
Sbjct: 401 AQGLFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKA 443
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC + +KA H+ + + + PD V ++ +I+GL +E
Sbjct: 246 TYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPD-VHSYT-------IIINGLCKIKMVDE 297
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPL- 121
AL + + EM P+ V++++++ G + G + A++L +M D+ Q N++ L
Sbjct: 298 ALNLFK---EMHCEPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLL 354
Query: 122 -------SGDVYWSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF--- 168
D +L+ K QG + Y LI+ C +G + A+ L DE
Sbjct: 355 HALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEAVTLLSK 414
Query: 169 ----GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G + +V Y+ +I L K +A+K+L ++
Sbjct: 415 MEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMI 451
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 41/244 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P T N+++ G G EAL IL+ M + PD +++ +V+ + R G
Sbjct: 339 YKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGF----- 393
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
DE G M +G + + + YT++INAY G+ KA
Sbjct: 394 -----HDE--------------GAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALE 434
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+ ++ G V Y+ ++ L K++R+++ K+L + + C +T++T++
Sbjct: 435 VFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPD--RITWNTMLAV 492
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
C V + VL M + +PD +N LI + RC +
Sbjct: 493 CGEKGKQKFV---------------SQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDV 537
Query: 281 YDMY 284
MY
Sbjct: 538 AKMY 541
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 40/247 (16%)
Query: 38 VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
V E+S + C ++H G+ + A+EI M E GL P V++ ++ + ++G
Sbjct: 230 VEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMG--- 286
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
+A+ + LE+ + M+S +G DE T++I+A +G + +
Sbjct: 287 RAWSMILELLDEMRS--------------------KGLEFDEFTCTTVISACGREGILDE 326
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTL 217
A+ D+L G + Y+ ++ K EA +L + + C D +
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEP-------DAI 379
Query: 218 IENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
N ELV + +E A+V++TM P+ Y +I + + +
Sbjct: 380 TYN----------ELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDA 429
Query: 278 DKAYDMY 284
DKA +++
Sbjct: 430 DKALEVF 436
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+ KA M D +IH V+ P+LVT N+LI G +A E+L+ + G+
Sbjct: 673 KLEKAHEMLD-VIH-------VSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGI 724
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
PD VS+ V+ GF + G +++A + EM +QP
Sbjct: 725 SPDVVSYNTVIKGFCKKGLVQEAIRILSEMTAN-------GVQPCP-------------- 763
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
+ + + ++ Y +G +A ++ + G + + Y ++I G K + +EA
Sbjct: 764 ---ITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 133/330 (40%), Gaps = 49/330 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTE--FSPSLV--------------- 46
Y L+ C G A + +M KGFLP + F L+
Sbjct: 261 TYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQLMSGNENGLLNGNGTQV 320
Query: 47 ---TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
TCNAL++GL G+ E+A EIL + G+ P VS+ +V+ + + G+L K
Sbjct: 321 DEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTA 380
Query: 104 LEMDEMMQSNNMLAIQPL------SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCAD 152
EM++ + + L +GD+ + M ++G Y SLIN Y
Sbjct: 381 EEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMT 440
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV----------Y 202
+ V+ + +E+ + G Y LI+ L K + +A+ +L +V Y
Sbjct: 441 CDFVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIY 500
Query: 203 HL-----CTSSWPTLTF---DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH 254
++ C+ S P F + +I+N + + L+ G EA ++ M
Sbjct: 501 NMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTR 560
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
KPD YN L+ + N +K ++Y
Sbjct: 561 KGYKPDVITYNSLMSVYAMSGNPEKCLELY 590
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y ++G C + A + D+MI + +P+ VT N LI G G
Sbjct: 189 TYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPN--------TVTFNTLIDGYCKVGGI 240
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE---MMQSNNMLAI 118
+EA + M + V++ ++SG +G L A + LEM+ + + + L
Sbjct: 241 DEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVF 300
Query: 119 --QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
Q +SG+ L G G +DE +L+N C G+V KAK +L +L G V V
Sbjct: 301 DDQLMSGNENGLLNG-NGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVS 359
Query: 177 YDVLISGLDKKA-------RTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
Y++L++ +K +E +K L Y +TF+TLI N+F
Sbjct: 360 YNILVNAYCQKGDLNKGILTAEEMEKRGLKPSY---------VTFNTLI-----NKFCET 405
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+L N+A + M+ P YN LI
Sbjct: 406 GDL----------NQAERWVKKMIEKGVSPTLETYNSLI 434
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 129/325 (39%), Gaps = 68/325 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ YC KG+ +K ++M +G PS VT N LI+ G +
Sbjct: 359 SYNILVNAYCQKGDLNKGILTAEEMEKRGL--------KPSYVTFNTLINKFCETGDLNQ 410
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ M E G+ P ++ ++++G+ + + +++ E++ N+ +
Sbjct: 411 AERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKS------ 464
Query: 124 DVYWSLMG---KQGGLLD-EVN---------------YTSLINAYCADGEVVKAKTLLDE 164
Y SL+ K G LLD E+ Y LI A C+ + A L+E
Sbjct: 465 --YGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNE 522
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLI---- 218
+ G V Y+ LI+G+ K R EA+ + L H+ + +T+++L+
Sbjct: 523 MIQNGIDATIVTYNTLINGIGKNGRVTEAENLFL----HMTRKGYKPDVITYNSLMSVYA 578
Query: 219 -----ENC--------------SNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKP 259
E C S F L+ + + +E + ML P
Sbjct: 579 MSGNPEKCLELYDNMKKRGIKPSIGTFHPLINSCRKKGVVTME----KMFQEMLGMKLIP 634
Query: 260 DGAVYNFLIVEHCRCDNGDKAYDMY 284
D AVYN +I + N KA ++
Sbjct: 635 DRAVYNEMIYGYAEDGNVLKAMSLH 659
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ C + AF ++MI G ++VT N LI+G+G GR
Sbjct: 497 ADIYNMLIEASCSLSKPKDAFRFLNEMIQNGI--------DATIVTYNTLINGIGKNGRV 548
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK------------------ 103
EA + M G PD +++ +++S + G K +L
Sbjct: 549 TEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPL 608
Query: 104 ---------LEMDEMMQS-------------NNMLAIQPLSGDVYWSL-----MGKQGGL 136
+ M++M Q N M+ G+V ++ M QG
Sbjct: 609 INSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGID 668
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D+V Y LI A+ D V + K +LD++ G V ++ Y +L+ G
Sbjct: 669 SDKVTYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILVKG 715
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 51/249 (20%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C ++A+ ++ +MI K SP +VT +ALI+G G+ +EA
Sbjct: 93 YSTIIDSLCKDKLVTEAYVLYSEMITKRI--------SPDVVTFSALIYGFCIVGQLKEA 144
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M + PD +F +V F + G ++A N++A
Sbjct: 145 FGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEA-------------KNVIA------- 184
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M K+G + D V Y SL++ YC +V KAK +L ++ G + Y+++I+G
Sbjct: 185 ----MMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGF 240
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP------------TLTFDTLIEN-CSNNEFTSLVE 231
K EA L+L +C +T+++ + C N++ +
Sbjct: 241 CKIKMVDEA----LNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIA 296
Query: 232 LVKGFRIRD 240
VK +I+D
Sbjct: 297 FVK--KIKD 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 124/276 (44%), Gaps = 38/276 (13%)
Query: 21 AFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDT 80
AF + +++ GF PD ++T N LI GL G+ +EAL + +G D
Sbjct: 4 AFSLFGKILKVGFQPD--------IITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQ 55
Query: 81 VSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQPLSGD-------VYWSL 129
VS+ +++G ++G+ +A + ++D + + +++ I L D V +S
Sbjct: 56 VSYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSE 115
Query: 130 MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKAR 189
M + D V +++LI +C G++ +A L E+ +++L+ K+
Sbjct: 116 MITKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGN 175
Query: 190 TQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASV 248
T+EAK ++ ++ P +T+ +L++ G+ + + N+A V
Sbjct: 176 TKEAKNVIAMMMKE---GVIPDVVTYGSLMD---------------GYCLVNKVNKAKHV 217
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ + P+ YN +I C+ D+A +++
Sbjct: 218 LSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLF 253
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 41/280 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ +C +G +A ++ M+ +G +PD +VT +L+ G +
Sbjct: 160 VYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPD--------VVTYGSLMDGYCLVNKV 211
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A +L + MGL P+ S+ +++GF +I + DE + N + + +
Sbjct: 212 NKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMV----------DEALNLFNEMCCRGI 261
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ D M +G + + Y S ++A C + +V KA + ++ G Y++LI
Sbjct: 262 APDK----MHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILI 317
Query: 182 SGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
GL K+ R + A+ + L+ + W T++ +I G +
Sbjct: 318 DGLCKEVRLENAQVIFQDLLIKGYKVTVW---TYNIMIN---------------GLCLEG 359
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L ++A +L M PD Y +I + D D+A
Sbjct: 360 LFDQAMILLEKMEENGCIPDVVTYETIIRALFKNDENDRA 399
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 25/248 (10%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C++ E AF + Q+ G +P++ T N+L +G +EA I
Sbjct: 803 LVSKLCERNEIKMAFDLVKQLNMLGV--------TPNVDTYNSLFNGFVRTCSFDEARCI 854
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L + E G P FT ++ G R+G ++ A +L+ EM + S+ +A+ + +
Sbjct: 855 LHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLAR 914
Query: 128 SLMGKQG----GLLDEVN-------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
S + G++ E+ +T+L++ YC +G V KA L +
Sbjct: 915 SRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAA 974
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN--CSNNEFTSLVELV 233
Y+VLISGL Q A K+ + WP T + LI++ C+ N +L+
Sbjct: 975 YNVLISGLCADGDIQAAFKLYEEMEQR---DIWPNTSIYIVLIDSFLCTGNYIVESEKLL 1031
Query: 234 KGFRIRDL 241
+ R R+L
Sbjct: 1032 RDLRTREL 1039
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 49/267 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ YC KG + A + D M KG D + T N LI L R+
Sbjct: 214 AVTYNTLLNWYCKKGRYKAASELIDAMASKGIAAD--------VCTYNVLIDDLCRKSRS 265
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ ILR M + ++P+ +++ +++G + G++ A ++ E M N+L
Sbjct: 266 AKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVA----TKVFEEMSLCNLLP---- 317
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ V Y +LI +C++G + +A L D + G V Y L+
Sbjct: 318 ----------------NSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALL 361
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
+G+ K A+ + L +S + D + + +T++++ G L
Sbjct: 362 NGISKHAQ------------FGLVSSVLERMRMDGV--RVGHISYTTMID---GLCKNGL 404
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLI 268
EA +L+ ML + PD ++ L+
Sbjct: 405 LEEAVQLLDDMLKVSVSPDIVTFSVLV 431
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 51/245 (20%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
FSPS+ TCN ++ L + + M + P+ +F +++ G+ + A
Sbjct: 140 FSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAG 199
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
L +MDE G V Y +L+N YC G A
Sbjct: 200 VLLRKMDE------------------------TGHFPTAVTYNTLLNWYCKKGRYKAASE 235
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEA----KKMLLSLVYHLCTSSWPT-LTFD 215
L+D + G Y+VLI L +K+R+ + ++M ++VY P +T++
Sbjct: 236 LIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVY-------PNEITYN 288
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
TLI LVK +I A V M N P+ YN LI HC
Sbjct: 289 TLING-----------LVKEGKI----GVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNG 333
Query: 276 NGDKA 280
N ++A
Sbjct: 334 NIEEA 338
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 112/295 (37%), Gaps = 39/295 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y +L+ C KG+ A + + I KG L SP+ +L+ GL G +
Sbjct: 621 SFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLL-------SPNPAMYTSLVDGLLKEGHS 673
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ AL + M G+ PD ++F ++ + R G++ K D+ M N+ L
Sbjct: 674 KAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNIL 733
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
++ M G D + + SLI YC G + A L ++T G
Sbjct: 734 LHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGF 793
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT--FDTLIENCSNNEFTS 228
+VL+S L ++ + A ++ L T + T F+ + CS
Sbjct: 794 KVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCS------ 847
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+EA +L+ +L P + LI CR N A ++
Sbjct: 848 -------------FDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMEL 889
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------EF---SPSL- 45
+ Y L+ +C G +A + D M+ G P+ VT +F S L
Sbjct: 319 SVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLE 378
Query: 46 -----------VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
++ +I GL G EEA+++L M ++ + PD V+F+ +V+GF + G
Sbjct: 379 RMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAG 438
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
+ + L + M ++ +++M + G + D + L+ ++C G
Sbjct: 439 KTGLVPNRVLHSTLIYNYCKMGNLKEALNA--YAVMNQSGHVSDHFTSSVLVASFCRCGR 496
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ +A+ +D ++ G SV +D +I
Sbjct: 497 LEEAEYFVDHMSRMGLAPSSVTFDCII 523
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 32/177 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+ L+ C G A + D+M G S V +A+I GL + +EA
Sbjct: 870 FTTLIRGMCRMGNVKGAMELQDEMKILGV--------SSQGVAMSAIIRGLARSRKTDEA 921
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
IL M EM + P +FT ++ + + G + KA +L+
Sbjct: 922 TRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELR--------------------- 960
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
S+M + LD Y LI+ CADG++ A L +E+ + IY VLI
Sbjct: 961 ---SVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLI 1014
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 57/285 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS---------------PSLVTC 48
+Y ++ C G +A + D M+ PD VT FS P+ V
Sbjct: 391 SYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVT-FSVLVNGFLKAGKTGLVPNRVLH 449
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
+ LI+ G +EAL M + G D + + +V+ F R G L +A
Sbjct: 450 STLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEA--------- 500
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
+ + M + G V + +I+ Y G+ +KA ++ D++
Sbjct: 501 ---------------EYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSL 545
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
G + Y+ L+ GL EAK ++ SS P T + +
Sbjct: 546 GHLPSQFTYEGLLKGLLIGGHINEAK------IFMHRPSSIPYAIGSTF--------YNT 591
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
++ L R +L N A ++L+ M+ N PD Y LI CR
Sbjct: 592 MLTLTS--RSGNLSN-AVALLDEMVMNNFVPDSFTYTSLIAGLCR 633
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ C F + H+ ++I G PDF C AL+ GL G +
Sbjct: 152 SYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKV--------CAALVVGLCSGGYVDL 203
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNML- 116
A E++ G+ G+ + + + A++ GF+++G+ KA ++ M +++ N +L
Sbjct: 204 AYELVVGVISGGVEVNCLVYNALIHGFYKMGKKDKAEAIRGFMSKNGCAPDLVTYNILLN 263
Query: 117 -AIQPLSGDVYWSLMG--KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
++ D L+ ++ G+ D +Y L+ A+C +V +A + V
Sbjct: 264 YGCDEVTVDEAERLVETMERSGMADLYSYNELLKAFCKAYQVDRAYLYMVNKMQSKGVCD 323
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
+V Y+ +I K RT+ A ++ ++ + + + L+
Sbjct: 324 AVSYNTIIVAFCKVRRTERAYEL-----------------YEEMCRKGIQPDVVTFTVLI 366
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
K F + N A +L M PD Y ++ C+ N DKAY ++
Sbjct: 367 KAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVF 417
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAF-HMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y L+ +C + +A+ +M ++M KG V+ N +I R
Sbjct: 290 YSYNELLKAFCKAYQVDRAYLYMVNKMQSKGVC---------DAVSYNTIIVAFCKVRRT 340
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI--- 118
E A E+ M G+ PD V+FT ++ F R G A L +EM M +++
Sbjct: 341 ERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTV 400
Query: 119 ---QPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
Q SG++ + M + G D V+Y ++IN +C V+ A L +E+ G
Sbjct: 401 VDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVKGL 460
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKM 196
V +++++ L + + EA ++
Sbjct: 461 DPDEVTFNLIVGVLIQGNKISEAYRV 486
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y+ ++ YC +A + ++M+ G PS+ + NALI G G
Sbjct: 266 SYMIVISGYCKLSNMKEASSIFNEMVRSGV--------QPSVASFNALIDGFVKAGDISS 317
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+++ + M G PD V+FT+++ G+ R+G++ D LE+ M++ N S
Sbjct: 318 AVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQV----DYGLELWNEMKARN------FSA 367
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++Y Y+ +I+A C + +A LL L V Q+ IY+ +I G
Sbjct: 368 NLY--------------TYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDG 413
Query: 184 LDKKARTQEAKKMLLSL 200
K EA +++ +
Sbjct: 414 YCKSGNVDEANAIVVDM 430
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 47/285 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ + L+ +C GE +AF + M + G PD +V+ N L+ GL
Sbjct: 198 SFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPD--------VVSYNTLMTGLCRVNDV 249
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ A ++L+ + P+ VS+ V+SG+ ++ +++A + +EM++S ++
Sbjct: 250 DRARDLLKEINS----PNDVSYMIVISGYCKLSNMKEASSI---FNEMVRSGVQPSVASF 302
Query: 122 ---------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
+GD+ ++ M G D V +TSLI+ YC G+V L +E+
Sbjct: 303 NALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKA 362
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
Y ++IS L K R QEA ++L L + + I N
Sbjct: 363 RNFSANLYTYSIIISALCKSNRLQEAHELLRLL-------NQSEIVPQAFIYN------- 408
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
++ G+ +EA +++ M KPD + LI+ HC
Sbjct: 409 ---PVIDGYCKSGNVDEANAIVVDM-EKKCKPDKLTFTILIIGHC 449
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 102/249 (40%), Gaps = 29/249 (11%)
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
GR ++A+ + R + + L D+ +F ++ GF GE+ +A+ +M ++++
Sbjct: 177 GRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSY 236
Query: 119 QPL-SGDVYWSLMGKQGGLLDEVN------YTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L +G + + + LL E+N Y +I+ YC + +A ++ +E+ G
Sbjct: 237 NTLMTGLCRVNDVDRARDLLKEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQ 296
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLV 230
++ LI G K A M ++ H C +TF +LI+ C + +
Sbjct: 297 PSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPD--VVTFTSLIDGYCRVGQVDYGL 354
Query: 231 ELVKGFRIRDLE-------------------NEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
EL + R+ EA +L + P +YN +I +
Sbjct: 355 ELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGY 414
Query: 272 CRCDNGDKA 280
C+ N D+A
Sbjct: 415 CKSGNVDEA 423
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 108/288 (37%), Gaps = 52/288 (18%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
+S A H ++ KG PD L T N LI+ G A + + + G
Sbjct: 77 NRYSIALSFHQKLHFKGIKPD--------LFTYNVLINCFSQLGHTHFAFSLFANILKRG 128
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
PD V+F +++G GE+ KA + + +L Q
Sbjct: 129 YHPDIVTFNTLINGLCLKGEVHKALNF-------FEKLVVLKFQ---------------- 165
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
LD V+Y +LIN C GE A LL E+ V+Y +I+GL K +A
Sbjct: 166 -LDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFD 224
Query: 196 MLL---------------SLVYHLCT----SSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
+ +++Y C L D +EN +E+T LV F
Sbjct: 225 LYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYT-FNTLVSAF 283
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
E +V+ M+ KPD YN L+ +C DKA +++
Sbjct: 284 CKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIF 331
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 133/313 (42%), Gaps = 43/313 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ + G AF + ++ +G+ PD +VT N LI+GL G
Sbjct: 99 FTYNVLINCFSQLGHTHFAFSLFANILKRGYHPD--------IVTFNTLINGLCLKGEVH 150
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE-MMQSNNMLAIQPL 121
+AL + + D VS+ +++G ++GE R A L E++E ++Q + ++ +
Sbjct: 151 KALNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAII 210
Query: 122 SG-----------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+G D+Y ++ K+ D Y ++I +C G + A L +++
Sbjct: 211 NGLCKDKLVDDAFDLYTEMVAKRVSP-DVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENV 269
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE--------NCS 222
++ L+S K+ +E K ++ ++ +T+++L++ + +
Sbjct: 270 EADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPD--IITYNSLMDGYCLVKEVDKA 327
Query: 223 NNEFTSLVE------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
N F ++V+ ++ GF + +EA ++ M PD Y+ LI
Sbjct: 328 KNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDG 387
Query: 271 HCRCDNGDKAYDM 283
C+ +A ++
Sbjct: 388 FCKSGRIPQALEL 400
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E KA ++ + M+ +G + ++ + + +I+G +E
Sbjct: 310 TYNSLMDGYCLVKEVDKAKNIFNTMVQRGV--------TANVRSYSIMINGFCKVKMMDE 361
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M + PDT+++++++ GF + G + +A +L EM + Q N+
Sbjct: 362 AMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNI-------- 413
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ Y S++ A C V K LL ++ G + Y +L +G
Sbjct: 414 ----------------ITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNG 457
Query: 184 LDKKARTQEAKKMLLSL 200
L K R +EA+++ L
Sbjct: 458 LFKDGRLEEAREIFPDL 474
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + A+ ++ +MI + + SP + T N+LI+G G+ ++A
Sbjct: 20 YNTIIDGLCKDKLVNDAYELYSEMIAE--------KISPDVATFNSLIYGFCIIGQLKDA 71
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M + P +FT +V G + G++++A +
Sbjct: 72 FGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSV---------------------- 109
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
++M K G L + V YTS++ YC EV K K + ++ G + Y+++I+G
Sbjct: 110 --IAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGF 167
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLV 230
K EA L+ C P T+T+ +LI+ C + SL+
Sbjct: 168 CKIKIVNEA---LILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSLL 212
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 40/271 (14%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ +C G+ AF + QM+ K +PS+ T L+ GL G+ +EA
Sbjct: 57 SLIYGFCIIGQLKDAFGLFSQMVLKNI--------NPSVYTFTILVDGLCKEGKMKEAKS 108
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
++ M + G+ P+ V++T+++ G+ + E+ K +
Sbjct: 109 VIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHV------------------------ 144
Query: 127 WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDK 186
+ + + G + +Y +IN +C V +A L E+ G V +V Y LI GL K
Sbjct: 145 FRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCK 204
Query: 187 KARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE-- 244
+ +V HL L D L C +N + LVK + + ++++
Sbjct: 205 STMLGSLLMRCMLMVNHL-IYPLTVLYIDAL---CKSNHLDKAIALVKKIKDQGIQSDIL 260
Query: 245 --AASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A V +L + YN +I C+
Sbjct: 261 KNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 291
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 42/295 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV---TEFSPSLVTCNALIHGLGFFGRA 61
Y +MG Y G F K M + M +G PD V T + + +C A + GL
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSC-ATVSGL------ 319
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNM 115
A+E+L + + GL PD +++ ++S R L++A + M+ ++ N M
Sbjct: 320 --AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAM 377
Query: 116 LAIQ-----PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+++ L + + + G D V Y SL+ A+ +G K + + +E+ G
Sbjct: 378 ISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGF 437
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
+ + Y+ +I K R EA ++ Y SS N +T L+
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRL-----YRDMKSSG---------RNPDAVTYTVLI 483
Query: 231 ELV-KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+L+ K +I EA+ V++ ML KP Y+ LI + + +A + +
Sbjct: 484 DLLGKASKI----EEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETF 534
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 25/197 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y +L+ + +G K + ++M+ GF D +T N +IH G GR
Sbjct: 406 AVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKD--------EMTYNTIIHMYGKHGRH 457
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EAL + R M G PD V++T ++ + ++ +A + M EM+ + +
Sbjct: 458 DEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKV---MSEMLDAGVKPTLHTY 514
Query: 122 S--------------GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
S + ++ M + G D + Y+ +++ + E+ KA L E+
Sbjct: 515 SALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIE 574
Query: 168 FGDVRQSVIYDVLISGL 184
G + +Y+V++ L
Sbjct: 575 AGFTPDTGLYEVMLPAL 591
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P L T NA+I G G A +A + + G PD V++ +++ F + G K D+
Sbjct: 369 PDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDI 428
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
EM +M G DE+ Y ++I+ Y G +A L
Sbjct: 429 SEEMVKM------------------------GFGKDEMTYNTIIHMYGKHGRHDEALRLY 464
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENC 221
++ G +V Y VLI L K ++ +EA K++ + L PTL T+ LI C
Sbjct: 465 RDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEM---LDAGVKPTLHTYSALI--C 519
Query: 222 SNNEFTSLVELVKGF-RIRDLENEA-----ASVLNTMLHWND-KPDGAVYNFLIVEHCRC 274
+ + VE + F R+R+ +A + +L+ L +N+ K A+Y +I
Sbjct: 520 AYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTP 579
Query: 275 DNG 277
D G
Sbjct: 580 DTG 582
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + A+ ++ +MI K SP++VT N+LI+G G+ +EA
Sbjct: 188 YSTIIDGLCKDKLVNDAYELYSEMITK--------RISPTVVTLNSLIYGYCIVGQFKEA 239
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+LR M + PD +F +V + G++++A SG
Sbjct: 240 FGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAK---------------------SG- 277
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++M K+G + D V Y+SL++ YC EV KAK +L ++ + Y ++I+G
Sbjct: 278 --IAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVING 334
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC G+ AF + +++ G+ P+ +T L+ G + +EAL
Sbjct: 86 LINCYCHLGQMRFAFSIFAKILKMGY--------HPNTITLTTLVKGFCLNHKVKEALHF 137
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM---------LAI 118
+ +G + VS+ +++G +IGE R A + +++ + N+ L
Sbjct: 138 HDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCK 197
Query: 119 QPLSGDVY--WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV- 175
L D Y +S M + V SLI YC G+ +A LL E+ ++ V
Sbjct: 198 DKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV-LKNINPDVY 256
Query: 176 IYDVLISGLDKKARTQEAK 194
+++L+ L K+ + +EAK
Sbjct: 257 TFNILVDALCKEGKIKEAK 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 94/233 (40%), Gaps = 41/233 (17%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++V+ + LI+ G+ A I + +MG P+T++ T +V GF ++++A
Sbjct: 76 IKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEAL 135
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+++LA+ G ++V+Y +LIN C GE A
Sbjct: 136 HFH---------DHVLAL---------------GFHFNQVSYGTLINGLCKIGETRAALQ 171
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+L ++ V+Y +I GL K +A ++ + +I
Sbjct: 172 MLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYEL-----------------YSEMITK 214
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ +L L+ G+ I EA +L M+ N PD +N L+ C+
Sbjct: 215 RISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCK 267
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 42/298 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A AY L+ +C G+ H QM +KG+LP+ + T N LI+G
Sbjct: 313 AVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPN--------VDTYNILIYGFCESRML 364
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ AL++ M G+ + V+F ++ G G + + + LE+ E + + I P
Sbjct: 365 DLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSI-LELMEETKEGSKGHISPY 423
Query: 122 SGDVYW-----------SLMGKQGGLLDE-VNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ +Y + K G L V+ + I C +G + AK + D++ G
Sbjct: 424 NSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEG 483
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLI-ENCSNNEFT 227
+ ++Y+ L+ G + +EA +++ ++ + C +P TF+ +I E C +
Sbjct: 484 GIPSILVYNSLVHGFSQHGSIREAVELINEMISNNC---FPIASTFNAIITEFCEQGKIE 540
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
S ++ ++ R P+ Y+ LI CR + KA +++
Sbjct: 541 SALKFMEDITARGC----------------VPNTETYSPLIDVLCRKGDIQKALQVFL 582
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 123/298 (41%), Gaps = 45/298 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ Y + +A + ++ +PD VT + CNA GR EA E+
Sbjct: 249 LISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNA--------GRVTEAAEV 300
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNML------ 116
L + +G D V++ ++ GF +G+++ +M+ + + N+L
Sbjct: 301 LERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCE 360
Query: 117 -AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD--ELTHFGDVRQ 173
+ L+ D++ M G + V + ++I C++G + ++L+ E T G
Sbjct: 361 SRMLDLALDLFND-MKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGH 419
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENC-------SNNEF 226
Y+ +I GL K+ R EA + L + + ++ T+I+ C + N +
Sbjct: 420 ISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSM---TIIQKCKEGAIEDAKNIY 476
Query: 227 TSLVE------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+++ LV GF EA ++N M+ N P + +N +I E C
Sbjct: 477 DKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFC 534
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G A +++D+MI +G +P S++ N+L+HG G EA+E++ M
Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIP--------SILVYNSLVHGFSQHGSIREAVELINEMI 515
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
FP +F A+++ F G++ A LK D +
Sbjct: 516 SNNCFPIASTFNAIITEFCEQGKIESA--LKFMED----------------------ITA 551
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
+G + + Y+ LI+ C G++ KA + E+ G + I+
Sbjct: 552 RGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIW 596
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 122/302 (40%), Gaps = 58/302 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + A+ ++ +MI V P++VT ++LI+G G+ ++A
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMI--------VKRIPPTVVTFSSLIYGFCIVGKFKDA 247
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M + PD +F +V + G++++A N++A+
Sbjct: 248 FRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEA-------------KNVIAV------ 288
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
M K+G V Y +L++ YC EV KAK +L ++ S Y+++I+G
Sbjct: 289 -----MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIE--------------------NCS 222
K EA L L + +C +T+++LI+ NC
Sbjct: 344 CKIKMVDEA----LCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCI 399
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+ + L+ F ++A +++ + +P+ YN LI C+ A D
Sbjct: 400 PADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQD 459
Query: 283 MY 284
++
Sbjct: 460 VF 461
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 55/318 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+ +L+ +C G+F AF + ++M+ K PD T
Sbjct: 230 TFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM 289
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++VT N L+ G +A +L + M + P++ S+ +++GF +I +
Sbjct: 290 MKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV 349
Query: 97 RKAYDLKLEM------DEMMQSNNMLAIQPLSGDV--YWSL---MGKQGGLLDEVNYTSL 145
+A L EM + N+++ +G + W L M D V Y SL
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I+ +C + V KA L+ ++ G Y++LI GL K + + A+ +
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ------- 462
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
D LI+ + N +T + ++ G L +EA +L+ M PD Y
Sbjct: 463 ---------DLLIKGYNVNAWTYNI-MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYE 512
Query: 266 FLIVEHCRCDNGDKAYDM 283
+I D +KA +
Sbjct: 513 TIIQALFHKDENEKAQKL 530
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 49/253 (19%)
Query: 34 LPDFVTEFSPSLVTCNALIHGL---GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
+P F + +L + NAL++ L G F A +A E EMG P+TV+F ++ G+
Sbjct: 138 MPKF--NCARTLQSFNALLNILVDHGMFCEANDAFERCY---EMGFRPNTVTFNIMMKGW 192
Query: 91 FRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYC 150
+ GE A + DEM++ +QP V+Y SLI
Sbjct: 193 LKKGEWENACKV---FDEMLERK----VQP-----------------SVVSYNSLIGFLS 228
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP 210
G++ KA L++++ G V Y +L+ GL + +EAKK++ + Y C P
Sbjct: 229 RKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK---P 285
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
L +++ N +L K +I +EA + M KPD YN +
Sbjct: 286 QLVNFSVLMN----------DLGKRGKI----DEAMVLFREMRKRRLKPDVVTYNVFVNY 331
Query: 271 HCRCDNGDKAYDM 283
C+ +AY M
Sbjct: 332 LCKEGKTAEAYKM 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P+ VT N ++ G G E A ++ M E + P VS+ +++ R G+L KA
Sbjct: 178 FRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAM 237
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSL------------MGKQGGLLDEVNYTSLINA 148
L +M + N + L + SL M +G VN++ L+N
Sbjct: 238 RLVEDMRRKGKRANGVTYALLMEGL-CSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
G++ +A L E+ V Y+V ++ L K+ +T EA KML+ + C +
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 209 WPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
T+ L++ C N +F S SVLN M P +N L
Sbjct: 357 --AATYRMLLDGLCRNGDFES----------------GLSVLNLMFASRHCPLSDTFNCL 398
Query: 268 IVEHCRCDNGDKAY 281
+V + N D Y
Sbjct: 399 VVGLLKSGNIDGGY 412
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 49/253 (19%)
Query: 34 LPDFVTEFSPSLVTCNALIHGL---GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
+P F + +L + NAL++ L G F A +A E EMG P+TV+F ++ G+
Sbjct: 138 MPKF--NCARTLQSFNALLNILVDHGMFCEANDAFERCY---EMGFRPNTVTFNIMMKGW 192
Query: 91 FRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYC 150
+ GE A + DEM++ +QP V+Y SLI
Sbjct: 193 LKKGEWENACKV---FDEMLERK----VQP-----------------SVVSYNSLIGFLS 228
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP 210
G++ KA L++++ G V Y +L+ GL + +EAKK++ + Y C P
Sbjct: 229 RKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK---P 285
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
L +++ N +L K +I +EA + M KPD YN +
Sbjct: 286 QLVNFSVLMN----------DLGKRGKI----DEAMVLFREMRKRRLKPDVVTYNVFVNY 331
Query: 271 HCRCDNGDKAYDM 283
C+ +AY M
Sbjct: 332 LCKEGKTAEAYKM 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P+ VT N ++ G G E A ++ M E + P VS+ +++ R G+L KA
Sbjct: 178 FRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAM 237
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSL------------MGKQGGLLDEVNYTSLINA 148
L +M + N + L + SL M +G VN++ L+N
Sbjct: 238 RLVEDMRRKGKRANGVTYALLMEGL-CSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
G++ +A L E+ V Y+V ++ L K+ +T EA KML+ + C +
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 209 WPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
T+ L++ C N +F S SVLN M P +N L
Sbjct: 357 --AATYRMLLDGLCRNGDFES----------------GLSVLNLMFASRHCPLSDTFNCL 398
Query: 268 IVEHCRCDNGDKAY 281
+V + N D Y
Sbjct: 399 VVGLLKSGNIDGGY 412
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 49/253 (19%)
Query: 34 LPDFVTEFSPSLVTCNALIHGL---GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
+P F + +L + NAL++ L G F A +A E EMG P+TV+F ++ G+
Sbjct: 138 MPKF--NCARTLQSFNALLNILVDHGMFCEANDAFERCY---EMGFRPNTVTFNIMMKGW 192
Query: 91 FRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYC 150
+ GE A + DEM++ +QP V+Y SLI
Sbjct: 193 LKKGEWENACKV---FDEMLERK----VQP-----------------SVVSYNSLIGFLS 228
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP 210
G++ KA L++++ G V Y +L+ GL + +EAKK++ + Y C P
Sbjct: 229 RKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCK---P 285
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
L +++ N +L K +I +EA + M KPD YN +
Sbjct: 286 QLVNFSVLMN----------DLGKRGKI----DEAMVLFREMRKRRLKPDVVTYNVFVNY 331
Query: 271 HCRCDNGDKAYDM 283
C+ +AY M
Sbjct: 332 LCKEGKTAEAYKM 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 32/254 (12%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P+ VT N ++ G G E A ++ M E + P VS+ +++ R G+L KA
Sbjct: 178 FRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAM 237
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSL------------MGKQGGLLDEVNYTSLINA 148
L +M + N + L + SL M +G VN++ L+N
Sbjct: 238 RLVEDMRRKGKRANGVTYALLMEGL-CSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
G++ +A L E+ V Y+V ++ L K+ +T EA KML+ + C +
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 209 WPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
T+ L++ C N +F S SVLN M P +N L
Sbjct: 357 --AATYRMLLDGLCRNGDFES----------------GLSVLNLMFASRHCPLSDTFNCL 398
Query: 268 IVEHCRCDNGDKAY 281
+V + N D Y
Sbjct: 399 VVGLLKSGNIDGGY 412
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 117/297 (39%), Gaps = 62/297 (20%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT-------------EFSPSLVTCNAL 51
Y ++ C A+ ++ +MI K P VT +P++ T N L
Sbjct: 299 YSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNIL 358
Query: 52 IHGLGFFGRAEEALEILRGM--------PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+ L G+ +EA ++ M EM P+TVS+ ++ GF + G L A+ L
Sbjct: 359 VDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLL 418
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD 163
+M + Q N+ + Y SL++A C + V KA L++
Sbjct: 419 DQMRDRGQPPNV------------------------ITYNSLLHALCKNHHVDKAIALVN 454
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSN 223
G Y+ L+ GL K+ R ++A+ + L+ + + PT T++ +I
Sbjct: 455 NFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLL--IKGYNLPTWTYNIMIN---- 508
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
G + L +EA ++L+ M PD Y +I D DKA
Sbjct: 509 -----------GLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKA 554
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C G S A+ + DQM +G P+++T N+L+H L ++
Sbjct: 397 SYNTLIDGFCKSGRLSHAWKLLDQMRDRGQ--------PPNVITYNSLLHALCKNHHVDK 448
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ ++ + G+ PD ++ +V G + G L+ A + D +++ N+
Sbjct: 449 AIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQ--LIFQDLLIKGYNLPT------ 500
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
W+ Y +IN C +G + +A+TLL ++ G + V Y +I
Sbjct: 501 ---WT-------------YNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHA 544
Query: 184 LDKKARTQEAKKMLLSLV 201
L +K +A+K++ L+
Sbjct: 545 LFEKDENDKAEKLVRELI 562
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 42/277 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+ ++A HD ++ GF + VT LI+GL G+ AL++
Sbjct: 232 LIKGLCLNGKVNEALLFHDHVLALGFHLNHVTY--------GILINGLCKMGQTRAALQV 283
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
LR + + + V ++ V+ G + + AY L EM ++ + S ++
Sbjct: 284 LRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFS--LFH 341
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL-----DELTHFGDVR---QSVIYDV 179
++ K + + L++A C DG++ +AK ++ + L F ++ +V Y+
Sbjct: 342 EMVLKNIN-PNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNT 400
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIEN-CSNNEFTSLVELVKGF 236
LI G K R A K+L + P +T+++L+ C N+ + LV F
Sbjct: 401 LIDGFCKSGRLSHAWKLL----DQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNF 456
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ + ++ PD YN L+ C+
Sbjct: 457 KDQGIQ----------------PDMHTYNTLVDGLCK 477
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 47/228 (20%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C + AF ++ +M+ G SP++VT ALI G G+ EEAL + + M
Sbjct: 2 CKDTFVNDAFDLYYEMVASGI--------SPNVVTYTALIDGFCVVGKLEEALGLFKKMI 53
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ P+ +F +V F + G++ +A ++ ++ MM+ + L DV
Sbjct: 54 SENINPNVYTFNGLVDAFCKEGKIEEAKNV---LNTMMEKD-------LKSDV------- 96
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLD-----ELTHFGDVRQSVIYDVLISGLDKK 187
V Y+SL+N YC EV KA+++ EL++ DVR Y+++I+ K
Sbjct: 97 -------VAYSSLMNGYCLVNEVFKAQSIFKTMAERELSY--DVRS---YNIMINEFCKM 144
Query: 188 ARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELV 233
EA K+ + +P +T+ TLI+ C + + +ELV
Sbjct: 145 KMVDEAIKLFEEMPLK---QIFPDVVTYHTLIDGLCKSGRLSYAMELV 189
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G+ +A + +MI + +P++ T N L+ G+ EE
Sbjct: 28 TYTALIDGFCVVGKLEEALGLFKKMISENI--------NPNVYTFNGLVDAFCKEGKIEE 79
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L M E L D V+++++++G+ + E+ KA + M E S ++ + +
Sbjct: 80 AKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMIN 139
Query: 124 DVYWSLMGKQGGLL-----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ M + L D V Y +LI+ C G + A L+DE+ G+
Sbjct: 140 EFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPP 199
Query: 173 QSVIYDVLISGLDK 186
+ Y ++ L K
Sbjct: 200 NIITYCPIVDVLCK 213
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC EF +A + + M+ KG P +VT N+++ L GR +
Sbjct: 305 TYTTLIDGYCKANEFEEALRLREMMVAKGLYP--------GVVTYNSILRKLCSDGRIRD 356
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-S 122
A ++L M E + D+V+ +++ + +IG+L A K +M E + N + L
Sbjct: 357 ANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIH 416
Query: 123 GDVYWSLMGKQG----GLLDE------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G S + G+LD Y+ ++++YC L DE G
Sbjct: 417 GFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCL 476
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
+Y LI L K R + A+K+L YH+
Sbjct: 477 NISLYRALIRRLCKIERIECAEKLL----YHM 504
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 49/224 (21%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS-------------------- 42
+ Y L+ YC KG +A + D+M +G D V+ S
Sbjct: 236 FTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGE 295
Query: 43 -----PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
P+ VT LI G EEAL + M GL+P V++ +++ G +R
Sbjct: 296 IKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIR 355
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
A L EM E +Q D V +LINAYC G++
Sbjct: 356 DANKLLHEMSER-------KVQA-----------------DSVTCNTLINAYCKIGDLNS 391
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
A ++ G S Y LI G K + + AK++L ++
Sbjct: 392 ALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGML 435
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 127/309 (41%), Gaps = 47/309 (15%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+A LM G S + ++ +M+ G +P+ + N LIH E
Sbjct: 166 HACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPN--------IYVYNCLIHACSKSRDVE 217
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
A IL M G+ PD ++ +++ + + G +A ++ D+M + L I +
Sbjct: 218 RAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQ---DKMEREGINLDIVSYN 274
Query: 123 GDVY-WSLMGK-----------QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+Y + GK + + + V YT+LI+ YC E +A L + + G
Sbjct: 275 SLIYGFCKEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGL 334
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
V Y+ ++ L R ++A K+L + + ++T +TLI C + S
Sbjct: 335 YPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQAD--SVTCNTLINAYCKIGDLNSA 392
Query: 230 VE-------------------LVKGF-RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
++ L+ GF + +LE+ A +L ML P+ Y++++
Sbjct: 393 LKFKTKMLEAGLTPNSFTYKALIHGFCKTSELES-AKELLFGMLDAGFSPNYRTYSWIVD 451
Query: 270 EHCRCDNGD 278
+C+ DN D
Sbjct: 452 SYCKKDNTD 460
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 54/301 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NL+ Y G+ +A + D M+ G P L T N LI L G E
Sbjct: 181 TYSNLIKGYGIVGKSGEAMKLLDLMLTDG-------NSKPDLQTYNMLIKALCQSGNMSE 233
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A I+ MP G+ PD+V+F + G+ E +A + LEM
Sbjct: 234 AWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQ---------------- 277
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++G +E +T ++N Y +G++ +A + + G ++++VLI+G
Sbjct: 278 --------RKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLING 329
Query: 184 -LDKKAR--TQEAKKMLLS-------LVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE-- 231
+D+ R E +++ + Y ++W F + +N S V+
Sbjct: 330 FVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPD 389
Query: 232 ------LVKGFRIRDLENEAA-SVLNTMLHWNDKPDGAVYNFLIV---EHCRCDNGDKAY 281
LVKG+ +R +E E A +L M+ +P+ + +I R DN K +
Sbjct: 390 VHAYSILVKGY-VRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIF 448
Query: 282 D 282
D
Sbjct: 449 D 449
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 121/270 (44%), Gaps = 40/270 (14%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF---FRIGELRKAYDLKL- 104
NA+I+ G E+A + ++ M E G P T +++ ++ G+ + GE K DL L
Sbjct: 148 NAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLT 207
Query: 105 --EMDEMMQSNNMLAIQPL--SGDVY--WSLMGK---QGGLLDEVNYTSLINAYCADGEV 155
+Q+ NML I+ L SG++ W+++ K G L D V + ++ Y + E
Sbjct: 208 DGNSKPDLQTYNML-IKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSET 266
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LT 213
+A+ ++ E+ G + V+++G K+ + +EA L VY + + L
Sbjct: 267 AEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEA----LQFVYRIKDLGFKPNLLV 322
Query: 214 FDTLI----ENCSNNEFTSLVELVKGFRIRD----------------LENEAASVLNTML 253
F+ LI + + ++ L+K F+I+ +++ + + ML
Sbjct: 323 FNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNML 382
Query: 254 HWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
KPD Y+ L+ + R +KA ++
Sbjct: 383 QSGVKPDVHAYSILVKGYVRSMETEKAEEL 412
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 50/273 (18%)
Query: 13 CDKGE-FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
C +G + + ++ DQ+ GF+PD VT NAL+ R +EAL++L+ M
Sbjct: 322 CRRGSLYEEVVNVFDQIKSAGFVPD--------RVTYNALLDVFAKARRPKEALQVLKDM 373
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G P +++ +++S R G L +A LK++M E I+P DV+
Sbjct: 374 ESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEK-------GIKP---DVF----- 418
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
YT+L++ + G+ A + DE+ G ++ LI +
Sbjct: 419 ---------TYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFV 469
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
E K+ + C S +T++TL+ +N+ +++E A V
Sbjct: 470 EMMKVFEEI--KECGCSPDIVTWNTLLAVFGHNQ---------------MDSEVAGVFKE 512
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M P+ +N LI + RC + D+A +Y
Sbjct: 513 MKRSGFVPERDTFNTLISAYSRCGSFDQAMAVY 545
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y K SKA + + M GF +PSL T N+L++ + +++ EILR +
Sbjct: 672 YGRKQVVSKANEILNFMYENGF--------TPSLTTYNSLMYMYSRSDKFQKSEEILREV 723
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----IQPLSGDVYW 127
+ G+ PD VS+ V+ + R G +++A + EM + N++ + + D +
Sbjct: 724 LKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMF 783
Query: 128 -------SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M KQG D+ Y S+I+ YC +A + + L
Sbjct: 784 VEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 42/262 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P T N LI G ++A+ + + M E G+ PD ++ AV++ R G ++
Sbjct: 518 FVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSE 577
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ EM + N E+ Y+SL++AY E+ + K
Sbjct: 578 KIIAEMKDGRCRPN------------------------ELTYSSLLHAYANGKEIERMKA 613
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT------- 213
L +E+ V+ L+ K E ++ L T TL
Sbjct: 614 LGEEIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYG 673
Query: 214 -----------FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+ + EN T+ L+ + D ++ +L +L KPD
Sbjct: 674 RKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKV 733
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
YN +I +CR +A M+
Sbjct: 734 SYNTVIYAYCRNGRMKEALRMF 755
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 50/273 (18%)
Query: 13 CDKGE-FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
C +G + + ++ DQ+ GF+PD VT NAL+ R +EAL++L+ M
Sbjct: 322 CRRGSLYEEVVNVFDQIKSAGFVPD--------RVTYNALLDVFAKARRPKEALQVLKDM 373
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G P +++ +++S R G L +A LK++M E I+P DV+
Sbjct: 374 ESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEK-------GIKP---DVF----- 418
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
YT+L++ + G+ A + DE+ G ++ LI +
Sbjct: 419 ---------TYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFV 469
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
E K+ + C S +T++TL+ +N+ +++E A V
Sbjct: 470 EMMKVFEEI--KECGCSPDIVTWNTLLAVFGHNQ---------------MDSEVAGVFKE 512
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M P+ +N LI + RC + D+A +Y
Sbjct: 513 MKRSGFVPERDTFNTLISAYSRCGSFDQAMAVY 545
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y K SKA + + M GF +PSL T N+L++ + +++ EILR +
Sbjct: 672 YGRKQVVSKANEILNFMYENGF--------TPSLTTYNSLMYMYSRSDKFQKSEEILREV 723
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----IQPLSGDVYW 127
+ G+ PD VS+ V+ + R G +++A + EM + N++ + + D +
Sbjct: 724 LKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMF 783
Query: 128 -------SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M KQG D+ Y S+I+ YC +A + + L
Sbjct: 784 VEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 94/262 (35%), Gaps = 42/262 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P T N LI G ++A+ + + M E G+ PD ++ AV++ R G ++
Sbjct: 518 FVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSE 577
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ EM + N E+ Y+SL++AY E+ + K
Sbjct: 578 KIIAEMKDGRCRPN------------------------ELTYSSLLHAYANGKEIERMKA 613
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT------- 213
L +E+ V+ L+ K E ++ L T TL
Sbjct: 614 LGEEIYSGSIETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYG 673
Query: 214 -----------FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+ + EN T+ L+ + D ++ +L +L KPD
Sbjct: 674 RKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKV 733
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
YN +I +CR +A M+
Sbjct: 734 SYNTVIYAYCRNGRMKEALRMF 755
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC K AF+++ M +G +P+ L++ +AL++GL G+ +E
Sbjct: 300 TYNILINGYCKKRRLEDAFYLYKIMGIRGVVPN--------LISYSALMNGLCKEGKIKE 351
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPLS 122
A ++ M + G+ PD VS+ ++SG+ + G K++M ++ + I+P
Sbjct: 352 AHQLFNQMVQRGIDPDVVSYNTLISGYCKEGG-------KMQMCRSLLHEMIGIGIRP-- 402
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D V + Y +G+++ A ++ EL FG +YD L+
Sbjct: 403 ---------------DNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLV 447
Query: 183 GLDKKARTQEAKKMLLSL 200
L K+ R A+ L+ +
Sbjct: 448 ALCKEGRPFAARSFLIRI 465
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHG-LGFFGRAE 62
+Y LM C +G+ +A + +QM+ +G PD +V+ N LI G G+ +
Sbjct: 335 SYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPD--------VVSYNTLISGYCKEGGKMQ 386
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-------EMMQSNNM 115
+L M +G+ PD V+ V G+ R G+L A ++ E+ E + +
Sbjct: 387 MCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLL 446
Query: 116 LAI----QPLSGDVYWSLMGKQGGLLDEVN-YTSLINAYCADGEVVKAKTLLDELTHFGD 170
+A+ +P + + + + G + E++ Y L + C+ V +A L E+
Sbjct: 447 VALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSM 506
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN--CSNNEFTS 228
Y +IS L + RT EA+ +L +V P L + N C N+
Sbjct: 507 KLNLTTYKAIISCLCRVKRTSEAENLLEEMV---SLGILPDLEIKRALINGYCEENDVDK 563
Query: 229 LVELV----KGFRIRDLENEAASV 248
V L+ K F++ D E+ A V
Sbjct: 564 AVSLLKFFAKEFQVYDTESYNAIV 587
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 28 MIHKG---FLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFT 84
M+ KG F + F P++V CN L++GL E E+ M +G+ + +F
Sbjct: 208 MVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFN 267
Query: 85 AVVSGFFRIGELRKAYDLKLEMDEM----------MQSNNMLAIQPLSGDVY-WSLMGKQ 133
+ R G+ K +M+E + N + L Y + +MG +
Sbjct: 268 IMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIR 327
Query: 134 GGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
G + + ++Y++L+N C +G++ +A L +++ G V Y+ LISG K+ +
Sbjct: 328 GVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQM 387
Query: 194 KKMLL 198
+ LL
Sbjct: 388 CRSLL 392
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 120/324 (37%), Gaps = 94/324 (29%)
Query: 9 MGPYCDKGEFSKAFHMHDQMIHKGF----------LPDFV-------------------- 38
M C GE KA + HD +I KGF PD V
Sbjct: 1 MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60
Query: 39 -------TEFSPSLVTCNALI--------------HGLGFFGRAEEALEILRGMPEMGLF 77
+ P +VT N LI +G G+ +EA+ +L M +
Sbjct: 61 LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120
Query: 78 PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL 137
P+ +FT +V G + GE++KA N+LAI M KQ
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKA-------------RNVLAI-----------MIKQRVEP 156
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ V Y SL++ Y EV KAK L + ++ G Y V+I+GL K EA +
Sbjct: 157 NIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLF 216
Query: 198 LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWND 257
+ H T+ +++LI+ L K RI D+ + +H
Sbjct: 217 KEM--HSKNMVPDTVAYNSLIDG-----------LCKSRRIYDVWDFIGE-----MHDRG 258
Query: 258 KPDGAV-YNFLIVEHCRCDNGDKA 280
+P + YN L+ C+ DKA
Sbjct: 259 QPANIITYNSLLDGLCKNHQVDKA 282
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 42/279 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ L+ C GE KA ++ MI + P++VT N+L+ G +
Sbjct: 125 TFTTLVDGLCKDGEVKKARNVLAIMIKQ--------RVEPNIVTYNSLMDGYFLVKEVNK 176
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A ++ + G+ P+ S+ +++G + + +A +L EM + +A L
Sbjct: 177 AKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLID 236
Query: 122 ----SGDVY--WSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
S +Y W +G+ +G + + Y SL++ C + +V KA TLL ++ + G
Sbjct: 237 GLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRP 296
Query: 173 QSVIYDVLISGLDKKARTQEAKKM---LLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
Y +L+ GL K R ++A+++ LL+ Y L +
Sbjct: 297 NIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV------------------ 338
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
++ G +EA S+L+ M PDG Y I
Sbjct: 339 --MINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITI 375
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 118/310 (38%), Gaps = 75/310 (24%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEF---------------------- 41
Y L+ C G+ +++ + D++I KG +P+ VT
Sbjct: 50 TYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDI 109
Query: 42 -----SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P+LV+ N L+ GL GR E+A+++ + +PE G P VS ++ G
Sbjct: 110 IAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRW 169
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+AY+L MD Q+ ++ V Y LI + DG +
Sbjct: 170 DEAYELMAGMDRDGQAPSV------------------------VTYNVLITSLSIDGRIE 205
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV---YHLCTSSWPTLT 213
+A +LDE+T G + Y+ +I+ L K+ R + L ++ +HL ++
Sbjct: 206 QAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTY---- 261
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
N L E R + EA +L + + P Y +I CR
Sbjct: 262 ----------NAIALLCE-------RGMVKEAFLILERLGKKQNYPISDFYKNVITLLCR 304
Query: 274 CDNGDKAYDM 283
N A+ +
Sbjct: 305 KGNTYPAFQI 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 45/296 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C +G A + ++ KG F P +V+ N L+ L + GR +E
Sbjct: 120 SYNVLLTGLCKEGRTEDAIKLFKELPEKG--------FKPCVVSHNILLRSLCYEGRWDE 171
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A E++ GM G P V++ +++ G + +A+ + +DEM +S + S
Sbjct: 172 AYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKV---LDEMTKSG--FKVSANSY 226
Query: 124 DVYWSLMGKQGGL------LDE-VNYTSLINA--------YCADGEVVKAKTLLDELTHF 168
+ + + K+G + LD+ +N +N C G V +A +L+ L
Sbjct: 227 NPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALLCERGMVKEAFLILERLGKK 286
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
+ S Y +I+ L +K T A ++L + H T + T+ +LI
Sbjct: 287 QNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPD--SYTYSSLI---------- 334
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+G + +EA + + P YN LI+ C+ D + +++
Sbjct: 335 -----RGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIF 385
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y N++ C KG AF + +M GF PD T S LI G+ G +EA
Sbjct: 295 YKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSS--------LIRGMCREGMLDEA 346
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L+I + E G P ++ A++ G + + D+ +E+ +MM +
Sbjct: 347 LQIFGILEEHGYVPHVDNYNALILGLCK----SQRIDMSIEIFQMMVN------------ 390
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+G + +E+ Y L+ A + E+ A TLL+EL G + QS +
Sbjct: 391 --------KGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQSTV 434
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 51/214 (23%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEF---------------------- 41
Y L+ C G+ +++ + D++I KG +P+ VT
Sbjct: 175 TYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDI 234
Query: 42 -----SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P+LV+ N L+ GL GR E+A+++ + +PE G P VS ++ G
Sbjct: 235 IAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRW 294
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
+AY+L MD + G V Y LI + DG +
Sbjct: 295 DEAYELMAGMD------------------------RDGQAPSVVTYNVLITSLSIDGRIE 330
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKART 190
+A +LDE+T G + Y+ +I+ L K+ R
Sbjct: 331 QAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRV 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+ AF +Q++ KG P + L++ L G+A +A+ ++ M G+
Sbjct: 83 RLNDAFLQLEQIVGKGN--------KPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGI 134
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLAIQPLSGDVYWSL- 129
PD S+T +V+ R G + A L +M+ + N ++ + G + S+
Sbjct: 135 IPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQ 194
Query: 130 ----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLD 185
+ K+G + + V Y+ LI A + V +A LLD++ G V Y+VL++GL
Sbjct: 195 ILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLC 254
Query: 186 KKARTQEAKKMLLSL 200
K+ RT++A K+ L
Sbjct: 255 KEGRTEDAIKLFKEL 269
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 122/296 (41%), Gaps = 45/296 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C +G A + ++ KG F P +V+ N L+ L + GR +E
Sbjct: 245 SYNVLLTGLCKEGRTEDAIKLFKELPEKG--------FKPCVVSHNILLRSLCYEGRWDE 296
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A E++ GM G P V++ +++ G + +A+ + +DEM +S + S
Sbjct: 297 AYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKV---LDEMTKSG--FKVSANSY 351
Query: 124 DVYWSLMGKQGGL------LDE-VNYTSLINA--------YCADGEVVKAKTLLDELTHF 168
+ + + K+G + LD+ +N +N C G V +A +L+ L
Sbjct: 352 NPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALLCERGMVKEAFLILERLGKK 411
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
+ S Y +I+ L +K T A ++L + H T + T+ +LI
Sbjct: 412 QNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPD--SYTYSSLI---------- 459
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+G + +EA + + P YN LI+ C+ D + +++
Sbjct: 460 -----RGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIF 510
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y N++ C KG AF + +M GF PD T S LI G+ G +EA
Sbjct: 420 YKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSS--------LIRGMCREGMLDEA 471
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L+I + E G P ++ A++ G + + D+ +E+ +MM +
Sbjct: 472 LQIFGILEEHGYVPHVDNYNALILGLCK----SQRIDMSIEIFQMMVN------------ 515
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+G + +E+ Y L+ A + E+ A TLL+EL G + QS +
Sbjct: 516 --------KGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQSTV 559
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ YC E KA+ + D+M K + SP ++T ++I GLG G+ ++
Sbjct: 233 TYNSLVDVYCKGREIEKAYKVFDEMREK--------DLSPDVITYTSVIGGLGLVGQPDK 284
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L+ M E G++PD ++ A + + L A++L EM S N
Sbjct: 285 ARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFR 344
Query: 124 DVYWS------------LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
YWS +MG +G L + LI + ++ A L E+ G
Sbjct: 345 VFYWSNDLQSSWNLYKRMMG-EGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFG 403
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
+++ DVL L + EA+K L ++
Sbjct: 404 SYTLVSDVLFDMLCDMGKLMEAEKCFLEMI 433
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 40/303 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + G F +AF ++QM+ PD + T N LI G + ALE+
Sbjct: 184 LIHGFVKSGRFDRAFEFYNQMVKDRIKPD--------VFTFNILISGYCRDFKFGFALEM 235
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNM--------LAI 118
M +MG P+ V+F ++ G FR + + + EM E+ Q +++ L
Sbjct: 236 FDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCK 295
Query: 119 QPLSGDVYWSLM--GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+ V LM K+G L +Y L+ C GE KA ++ EL G V +
Sbjct: 296 EGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLIS 355
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSN-------NEFTSL 229
V+I GL + +EA +++ ++ +TF++++++ + N L
Sbjct: 356 CIVMIDGLRGLGKIEEAMRLVEKMLKEE-GMVLDVVTFNSVLQDLCDAGRTEDANRLRLL 414
Query: 230 VE-------------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
LV G+R ++E V+N ML PD A YN L+ C
Sbjct: 415 ASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCQR 474
Query: 277 GDK 279
++
Sbjct: 475 PNR 477
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 11/177 (6%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
PS+ CN LIHG GR + A E M + + PD +F ++SG+ R + A ++
Sbjct: 176 PSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEM 235
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSL-----------MGKQGGLLDEVNYTSLINAYCA 151
EM +M N++ L ++ M + G L +V L++ C
Sbjct: 236 FDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCK 295
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
+G V + LL E + G + + Y VL+ L K +A +++ L C S
Sbjct: 296 EGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPS 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 33/189 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y L+ C KGE KA + ++ KG +P SL++C +I GL G+
Sbjct: 318 GYDYFVLVEILCGKGEAFKALEVIYELWSKGCVP--------SLISCIVMIDGLRGLGKI 369
Query: 62 EEALEILRGM-PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
EEA+ ++ M E G+ D V+F +V+ G A L+L
Sbjct: 370 EEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDAGRTEDANRLRL---------------- 413
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
L +G D + Y L+ Y +G + + +++E+ G + Y+ L
Sbjct: 414 --------LASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKL 465
Query: 181 ISGLDKKAR 189
+ L R
Sbjct: 466 MDALSNCQR 474
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C K S+A D + HK F P ++ +L+HG G +A E+
Sbjct: 219 VISSLCKKRRASEAELFFDSLKHK---------FEPDVIVYTSLVHGWCRAGDIAKAEEV 269
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNMLAIQPL 121
M E G+ P+ +++ V+ R G++ +A+D+ EM + N+++ +
Sbjct: 270 FSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVK 329
Query: 122 SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+G ++ M + G D ++Y LI ++C D + +A +LD + G +
Sbjct: 330 AGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNAST 389
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
++ + + + A +M + C + TLT++ L+ ++++ +V +K
Sbjct: 390 FNSIFGCIAELHDVNGAHRMYAKMKELKCMPN--TLTYNILMRMFADSKSIDMVLKLKK- 446
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
E + + V +P+ Y LI+ C + + AY++
Sbjct: 447 -----EMDESEV---------EPNVNTYRILILMFCEKGHWNNAYNL 479
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 50/263 (19%)
Query: 18 FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLF 77
F A+H+ D M +G ++ T + L+ G A EA+ M + G
Sbjct: 159 FDLAWHLIDLMKSRGV--------RITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCK 210
Query: 78 PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL 137
PD VSF+ V+S + + R+A + +L D + +P
Sbjct: 211 PDKVSFSIVISS---LCKKRRASEAELFFDSLKHK-----FEP----------------- 245
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
D + YTSL++ +C G++ KA+ + ++ G Y ++I L + + A +
Sbjct: 246 DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVF 305
Query: 198 LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWND 257
++ C + +TF++L+ V + G + L+ V N M
Sbjct: 306 SEMIDAGCDPN--AVTFNSLMR----------VHVKAGRTEKVLQ-----VYNQMKRLGC 348
Query: 258 KPDGAVYNFLIVEHCRCDNGDKA 280
D YNFLI HC+ +N D+A
Sbjct: 349 AADTISYNFLIESHCKDENLDEA 371
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 76/334 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
A+ + ++ C KG A ++M+ KGF P+ +T
Sbjct: 313 AFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYG 372
Query: 40 EFS-----PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
E S P + T N+LI+GL + EEAL + M G+ +T+++ ++ F R
Sbjct: 373 EMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGD 432
Query: 95 ELRKAYDLKLEM---------------------DEMMQSNNMLAIQPLSGDVYWSLMGKQ 133
+++AY L EM + +++ M L D++ +
Sbjct: 433 SIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFL-----E 487
Query: 134 GGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
G + + + Y +LI+A+ + +A L++E+ G ++ Y+ LI L K ++
Sbjct: 488 GVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKG 547
Query: 194 KKMLLSLVYHLCTSS-WPTLTFDTLIENCS--NNEFTSLVELVKGFRIRDLENEAASVLN 250
L L+ + +P+ I +C+ +N F S+ ++ N+A L
Sbjct: 548 ----LGLIEEMFGKGIFPS------INSCNILSNSFCSIGKV----------NDALRFLR 587
Query: 251 TMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M+H PD YN LI C+ +A +++
Sbjct: 588 DMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLF 621
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 32/281 (11%)
Query: 5 YVNLMGPYCDKGEFSKAFHM-HDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G F +A + + M+ GF PD N +I GL G
Sbjct: 280 YNTLINGYVASGRFEEAKDLLYQNMVIAGFEPD--------AFMFNIMIDGLCKKGYLVS 331
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNMLAI 118
ALE L M E G P+ +++T +++GF + G+++ A+ + EM + + N L
Sbjct: 332 ALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIY 391
Query: 119 QPLSGDVYWSLMG------KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
D +G +G + + + Y +LI+A+ + +A L++E+ G
Sbjct: 392 GLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPL 451
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
++ Y+ LI L K + K +YH D +E N T L
Sbjct: 452 DNITYNGLIKALCKTGLCKNDKMEETLGLYH-----------DMFLEGVIANTIT-YNTL 499
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+ F D +A ++N ML D YN LI C+
Sbjct: 500 IHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCK 540
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G K + ++M KG P S+ +CN L + G+ +
Sbjct: 530 TYNGLIKALCKTGAIEKGLGLIEEMFGKGIFP--------SINSCNILSNSFCSIGKVND 581
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL LR M GL PD V++ ++++G + G +++A +L
Sbjct: 582 ALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNL--------------------- 620
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
++ + +G + V Y +LI+++C + A LL + G + + + +LI+
Sbjct: 621 ---FNRLQTEGMCPNAVTYNTLISSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILINC 677
Query: 184 LDKK 187
KK
Sbjct: 678 FVKK 681
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ + +A+ + ++M+ +GF D +T C GL + EE
Sbjct: 420 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKT---GLCKNDKMEE 476
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLA 117
L + M G+ +T+++ ++ F R +++AY L EM + + N ++
Sbjct: 477 TLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIK 536
Query: 118 IQPLSGDVYWSL------MGKQGGLLDEVNYTSLI-NAYCADGEVVKAKTLLDELTHFGD 170
+G + L GK G+ +N +++ N++C+ G+V A L ++ H G
Sbjct: 537 ALCKTGAIEKGLGLIEEMFGK--GIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGL 594
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIEN 220
V Y+ LI+GL K R QEA + L +C ++ +T++TLI +
Sbjct: 595 TPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNA---VTYNTLISS 642
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 45/239 (18%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEIL-RGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+P+ V N LI+G GR EEA ++L + M G PD F ++ G + G L A
Sbjct: 274 NPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSAL 333
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ ++EM++ +P + + YT LIN +C DG++ A
Sbjct: 334 EF---LNEMVEK----GFEP-----------------NVITYTILINGFCKDGKIQDAFQ 369
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+ E++ G ++ LI GL K + +EA + YH D +E
Sbjct: 370 MYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGL-----YH-----------DMFLEG 413
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR---CDN 276
N T L+ F D +A ++N ML D YN LI C+ C N
Sbjct: 414 VIANTIT-YNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKN 471
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
++LI GLG GR +EA ++ M E G PD+ + A++ G + G + A L M+
Sbjct: 426 SSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMER 485
Query: 109 MMQSNNMLAIQPLSGDVY-----------WSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
+ L +++ W LM +G + + +L C G+V +
Sbjct: 486 DGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVAR 545
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
A +LDEL G V ++ Y+ +I L K R +EA K+ +V
Sbjct: 546 ACKVLDELAPMGVVLETA-YEDMIGALCKAGRVKEACKLADGIV 588
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 39/274 (14%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
PSL T N+L++GL E A + M E PD V++ ++ G+ + G+ RKA
Sbjct: 208 IQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAI 267
Query: 101 DLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLDEVNYTSLINAY 149
++ EM+ + ++++ + GDV + L M +G + Y+ +I
Sbjct: 268 EMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGL 327
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML------------ 197
C G+V++ L + + G +Y LI K + A ++
Sbjct: 328 CKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDE 387
Query: 198 ---LSLVYHLCTSSWPTLTFDTLIENCSNNE-------FTSLVE-LVKGFRIRDLENEAA 246
++V LC S + + C+ N ++SL++ L K R+ +EA
Sbjct: 388 VTYSAIVNGLCKSGRVEEAL-SYFQFCNENGVVVNAVFYSSLIDGLGKAGRV----DEAE 442
Query: 247 SVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
V + M PD YN LI C+C D A
Sbjct: 443 KVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDA 476
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 49/271 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y ++ C G+ + + + + MI G + + ++ T ALI G G +
Sbjct: 317 SHGYSLVICGLCKMGKVLEGYALFENMIRNG------CKGNKAVYT--ALIDCYGKSGNS 368
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ AL + M G+ PD V+++A+V+G + G + +A
Sbjct: 369 DGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALS-------------------- 408
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
Y+ + G +++ V Y+SLI+ G V +A+ + DE+ G S Y+ LI
Sbjct: 409 ----YFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALI 464
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL K R +A L+LV + + C +T + + + FR+
Sbjct: 465 DGLCKCGRIDDA----LALVKRMER------------DGCEQTVYTFTILISELFRVHRN 508
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
E EA + + M+ P+ A + L + C
Sbjct: 509 E-EAVKMWDLMIDKGITPNVACFRALSIGLC 538
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 95/239 (39%), Gaps = 49/239 (20%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P +VT N +I G G+ +A+E++R M + L PD VS+ V+ + G++ L
Sbjct: 245 PDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSL 304
Query: 103 KLEMD----EMMQSNNMLAIQPL-----------------------SGDVYWSLM---GK 132
EM+ E+ L I L + VY +L+ GK
Sbjct: 305 YHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGK 364
Query: 133 QG---GLL-------------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G G L DEV Y++++N C G V +A + G V +V
Sbjct: 365 SGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVK 234
Y LI GL K R EA+K+ + C + ++ LI+ C + LVK
Sbjct: 425 YSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPD--SYCYNALIDGLCKCGRIDDALALVK 481
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
++LI GLG GR +EA ++ M E G PD+ + A++ G + G + A L M+
Sbjct: 426 SSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMER 485
Query: 109 MMQSNNMLAIQPLSGDVY-----------WSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
+ L +++ W LM +G + + +L C G+V +
Sbjct: 486 DGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVAR 545
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
A +LDEL G V ++ Y+ +I L K R +EA K+ +V
Sbjct: 546 ACKVLDELAPMGVVLETA-YEDMIGALCKAGRVKEACKLADGIV 588
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 39/274 (14%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
PSL T N+L++GL E A + M E PD V++ ++ G+ + G+ RKA
Sbjct: 208 IQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAI 267
Query: 101 DLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLDEVNYTSLINAY 149
++ EM+ + ++++ + GDV + L M +G + Y+ +I
Sbjct: 268 EMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGL 327
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML------------ 197
C G+V++ L + + G +Y LI K + A ++
Sbjct: 328 CKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPDE 387
Query: 198 ---LSLVYHLCTSSWPTLTFDTLIENCSNNE-------FTSLVE-LVKGFRIRDLENEAA 246
++V LC S + + C+ N ++SL++ L K R+ +EA
Sbjct: 388 VTYSAIVNGLCKSGRVEEAL-SYFQFCNENGVVVNAVFYSSLIDGLGKAGRV----DEAE 442
Query: 247 SVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
V + M PD YN LI C+C D A
Sbjct: 443 KVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDA 476
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 49/271 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ Y ++ C G+ + + + + MI G + + ++ T ALI G G +
Sbjct: 317 SHGYSLVICGLCKMGKVLEGYALFENMIRNG------CKGNKAVYT--ALIDCYGKSGNS 368
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ AL + M G+ PD V+++A+V+G + G + +A
Sbjct: 369 DGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALS-------------------- 408
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
Y+ + G +++ V Y+SLI+ G V +A+ + DE+ G S Y+ LI
Sbjct: 409 ----YFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALI 464
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL K R +A L+LV + + C +T + + + FR+
Sbjct: 465 DGLCKCGRIDDA----LALVKRMER------------DGCEQTVYTFTILISELFRVHRN 508
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
E EA + + M+ P+ A + L + C
Sbjct: 509 E-EAVKMWDLMIDKGITPNVACFRALSIGLC 538
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 95/239 (39%), Gaps = 49/239 (20%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P +VT N +I G G+ +A+E++R M + L PD VS+ V+ + G++ L
Sbjct: 245 PDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSL 304
Query: 103 KLEMD----EMMQSNNMLAIQPL-----------------------SGDVYWSLM---GK 132
EM+ E+ L I L + VY +L+ GK
Sbjct: 305 YHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGK 364
Query: 133 QG---GLL-------------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G G L DEV Y++++N C G V +A + G V +V
Sbjct: 365 SGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVK 234
Y LI GL K R EA+K+ + C + ++ LI+ C + LVK
Sbjct: 425 YSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPD--SYCYNALIDGLCKCGRIDDALALVK 481
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 36/297 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y L+ YC+ F KA ++ MI +G + V + ++H L GRA
Sbjct: 330 VYVYCALVHGYCNSRNFDKALAVYKSMISRGI--------KTNCVIFSCILHCLDEMGRA 381
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM------ 115
E +++ E GLF D ++ + ++G++ A + E+ M +M
Sbjct: 382 LEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTL 441
Query: 116 -----LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
L +P+ + M ++G D V Y L + + +A LL+ + G
Sbjct: 442 INGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGV 501
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW---PTLTFDTLIENCSNNEFT 227
S + ++I GL + +EA++ +W ++ I N +
Sbjct: 502 EPNSTTHKIIIEGLCSAGKVEEAEEFF----------NWLKGESVEISVEIYTALVNGYC 551
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ K ++ EA +L TML N KP +Y+ + C N + A+ ++
Sbjct: 552 EAALIEKSHELK----EAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLF 604
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y + C G A + + IH GF PD VT +I+G EA
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPD--------AVTYTIMINGYCKTNCLPEA 635
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
E+ + M E G+ PD V++T +++G+ ++ LR+A++L +M E
Sbjct: 636 HELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKE 679
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 44/237 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV-------------TEFS--------- 42
Y L+ Y +G+ +A + +M +GF PD V T+F
Sbjct: 438 YTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYME 497
Query: 43 -----PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
P+ T +I GL G+ EEA E + + +TA+V+G+ +
Sbjct: 498 SQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIE 557
Query: 98 KAYDLK---------LEMD----EMMQSNNMLAI----QPLSGDVYWSLMGKQGGLLDEV 140
K+++LK LEM+ ++M S A+ ++L G D V
Sbjct: 558 KSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAV 617
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
YT +IN YC + +A L ++ G +V Y ++I+G K +EA ++
Sbjct: 618 TYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ YC +A + M +G PD VT +I+G
Sbjct: 616 AVTYTIMINGYCKTNCLPEAHELFKDMKERGITPD--------AVTYTIMINGYCKMNCL 667
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM 109
EA E+ + M E G+ PD +++T ++ G G A+ L EM +M
Sbjct: 668 REAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDM 715
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 21/261 (8%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+++ YC K EF++A + ++ G +P + N I+ L E+AL+
Sbjct: 573 HILSIYCRKREFNEALALSEEFRDHG------VSLNP--YSYNEFINKLCRESFPEKALQ 624
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM--------LAI 118
+L M + + P V+++ ++S F + +KA L M ++ + N+ L I
Sbjct: 625 LLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALIDLCI 684
Query: 119 QPLSGDVYWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ D L M K+G D++ Y +LI A+C GE++ AKTL D + G V
Sbjct: 685 RNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVV 744
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL-VELVK 234
Y I+ K +A K + + L ++ + LI F +L LV
Sbjct: 745 TYSCFINAYWKLDMRDQAHKWYDEMRFSLLVATINAIIVSLLISLAVAGGFLALFFALVT 804
Query: 235 GFRIRDLENEAASVLNTMLHW 255
I L A V+ T++ W
Sbjct: 805 AIYIGALL-VALFVITTVMFW 824
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 126/329 (38%), Gaps = 54/329 (16%)
Query: 3 YAYVNLMGPYCD----KGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNA-----LIH 53
+AY +M YC + S A + + G P+ VT + C A +
Sbjct: 340 HAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWK 399
Query: 54 GLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK--LEMDEMMQ 111
+ +EA ++L M +G+ PD ++ ++ F + G+ +K DL+ ++++++
Sbjct: 400 LICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDLREDMKLNQIKP 459
Query: 112 S--NNMLAIQPLSGDVYWSL---------MGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
S N+ I L + +G G D+ Y +L++ +C +G++V A
Sbjct: 460 SIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFCREGDMVSAGK 519
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
LL+E+ + Y I G K + A K VY + + DT+ N
Sbjct: 520 LLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALK-----VYSIMQKR--GIRPDTIACN 572
Query: 221 ------CSNNEFTSLVELVKGFR--------------IRDLENE-----AASVLNTMLHW 255
C EF + L + FR I L E A +L ML
Sbjct: 573 HILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKR 632
Query: 256 NDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N P Y+ LI + N KA ++
Sbjct: 633 NVLPGVVNYSTLISCFAKQTNSKKAVKLF 661
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C + ++A+ ++ QMI V + SP +VT N+LI+G F G+ EA +
Sbjct: 131 IIDSLCKEKLVTEAYELYSQMI--------VKKISPDVVTFNSLIYGFCFVGQLIEAFGL 182
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
M + P+ +F +V + G ++ A +L M M Q N + + +
Sbjct: 183 FHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMM--MKQVNEVNKAKHV-----L 235
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
S + + G D +Y +IN +C V +A +L +E+ G +V Y LI GL K
Sbjct: 236 STITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKL 295
Query: 188 ARTQEA 193
R A
Sbjct: 296 GRISYA 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 34/277 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G+F +A H HD M+ F + VT LI+GL G+ EAL+
Sbjct: 61 LINGMCLNGKFKEALHFHDHML--------AHVFHLNQVTYAILINGLCKMGKTTEALQF 112
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
LR + + + + ++ + + +AY+L +M ++ +S DV
Sbjct: 113 LRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQM----------IVKKISPDV-- 160
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISGLDK 186
V + SLI +C G++++A L E+ ++ +V +++L+ L K
Sbjct: 161 ------------VTFNSLIYGFCFVGQLIEAFGLFHEMV-LKNINPNVYTFNILVDALCK 207
Query: 187 KARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAA 246
+ + AK +L ++ + + T+ + + S ++ GF + NEA
Sbjct: 208 EGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAF 267
Query: 247 SVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
S+ N M P+ Y+ LI C+ A+++
Sbjct: 268 SLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEL 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 12/224 (5%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
E +KA H+ + G PD + N +I+G EA + M G+
Sbjct: 227 EVNKAKHVLSTITQMGVPPDAQSY--------NIMINGFCKIKMVNEAFSLFNEMRCRGI 278
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
P+TV++++++ G ++G + A++L EM + Q ++ L + + QG
Sbjct: 279 SPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQ 338
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
LD Y LI+ C G + A+ + +L G Y ++I+GL + EA+ +
Sbjct: 339 LDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEAL 398
Query: 197 LLSLVYHLCTSSWPTL--TFDTLIENCSNNEFTSLVE--LVKGF 236
L + + C T L EN N L+ +V+G
Sbjct: 399 LSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIVRGL 442
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A +Y ++ +C ++AF + ++M +G SP+ VT ++LI GL GR
Sbjct: 247 AQSYNIMINGFCKIKMVNEAFSLFNEMRCRG--------ISPNTVTYSSLIDGLCKLGRI 298
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA-----YDLKLEMDEMMQSNNML 116
A E++ M + G PD ++ +++ + + + Y + +D + + +
Sbjct: 299 SYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQLDMYTYNILIDGLCKQGRLK 358
Query: 117 AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
Q + D+ +G L YT +IN C +G + +A+ LL ++ G V +V
Sbjct: 359 DAQVIFQDLLI-----KGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVT 413
Query: 177 YDVLISGLDKKARTQEAKKMLLSLV 201
+ +I L + + + A+K+L ++
Sbjct: 414 CETIIRALFENDKNERAEKLLREMI 438
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 60/230 (26%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y L+ +C K E +A+++ +M++ G PD VT
Sbjct: 186 TYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM 245
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ P+ TC +I G G EAL L M E+G+ P+ V F +++ G+ I
Sbjct: 246 QQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT 305
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV--YWSLMG--KQGGLLDEVN--------- 141
+ + M+E I+P DV Y ++M GL+D
Sbjct: 306 DTDGVEEALTLMEE-------FGIKP---DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 355
Query: 142 --------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y+ L Y G+ KA+ LL+ +T +G VI+ +ISG
Sbjct: 356 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P + NA+I+ G+ EA++I R M E G P T +F ++ GF +G +A L
Sbjct: 111 PDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL 170
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
LEM M+Q N ++P +E Y LI A+C E+ +A ++
Sbjct: 171 -LEM--MIQDGN---VKP-----------------NERTYNILIQAWCTKNELEEAWNVM 207
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
++ + G V Y+ L + T A++++L +
Sbjct: 208 HKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM 245
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 60/230 (26%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y L+ +C K E +A+++ +M++ G PD VT
Sbjct: 186 TYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM 245
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ P+ TC +I G G EAL L M E+G+ P+ V F +++ G+ I
Sbjct: 246 QQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT 305
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV--YWSLMG--KQGGLLDEVN--------- 141
+ + M+E I+P DV Y ++M GL+D
Sbjct: 306 DTDGVEEALTLMEE-------FGIKP---DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 355
Query: 142 --------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y+ L Y G+ KA+ LL+ +T +G VI+ +ISG
Sbjct: 356 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 405
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P + NA+I+ G+ EA++I R M E G P T +F ++ GF +G +A L
Sbjct: 111 PDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL 170
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
LEM M+Q N ++P +E Y LI A+C E+ +A ++
Sbjct: 171 -LEM--MIQDGN---VKP-----------------NERTYNILIQAWCTKNELEEAWNVM 207
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
++ + G V Y+ L + T A++++L +
Sbjct: 208 HKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKM 245
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 49/276 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y LM +C G+ S A+ + ++M + +PD + + L+ L +
Sbjct: 184 SYNILMRAFCLNGDISIAYTLFNKMFKRDVVPD--------IQSYRILMQALCRKSQVNG 235
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+++ M G PD+ ++T +++ R +LR+AY L
Sbjct: 236 AVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKL--------------------- 274
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
M +G D V+Y ++I +C +G A ++D++ G + V Y L++G
Sbjct: 275 ---LCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNG 331
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L EA K + + ++ + F + LVKGF
Sbjct: 332 LCHLGMLDEATKYV-----------------EEMLSKGFSPHFAVIHALVKGFCNVGRIE 374
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
EA VL L + P + ++ + C D+G K
Sbjct: 375 EACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVK 410
>Medtr8g463610.1 | PPR containing plant-like protein | HC |
chr8:22423507-22425972 | 20130731
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 52/299 (17%)
Query: 28 MIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVV 87
M +G +PD V +I GL R EA ++L M ++GL PD + AV+
Sbjct: 1 MFKEGIVPDVVLY--------AIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVI 52
Query: 88 SGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-------SGDVYWSLMGKQGGLLDEV 140
G +G L +A+ L LE+ E + + I + ++ M K G V
Sbjct: 53 QGLCDVGLLNRAHSLLLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVV 112
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG---------LDKKARTQ 191
+ +LIN C + KAK L +L G R+ ++ L G L KKA+
Sbjct: 113 TFNTLINGLCKANNLEKAKILFCKL-EVG--RRLSLHLSLSQGSGQVSDSARLLKKAKEM 169
Query: 192 -EAKKMLLS--LVYHLCTSSWP-TLTFDTLIE--------NCSNNEFTSLVE-------- 231
EA ++L + L+ +L P +T++ L+ N + N F L +
Sbjct: 170 CEAGQILRAYKLIANLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPNN 229
Query: 232 -----LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
++KG + D E+EA V M + +P +VY L+ CR A+ +Y+
Sbjct: 230 VTYGTIIKGLFMVDREDEAFKVFQRMQKTSSEPTLSVYRTLMTCLCRKSKVSCAFTLYL 288
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 51/277 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
++ ++ + GE +A + D M G +P ++ T NALI GL + E+A
Sbjct: 586 FLPIIHGFARAGETRRALEIFDTMRRSGCIP--------TVHTYNALILGLVEKCQMEKA 637
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L+IL M G+ P+ ++T ++ G+ +G+ KA+
Sbjct: 638 LQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQ----------------------- 674
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
Y++++ G +D Y +L+ A C G + A + E++ R + +Y++LI G
Sbjct: 675 -YFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGW 733
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
++ EA ++ + P + T+ + I C + D++N
Sbjct: 734 ARRGDVWEAADLMQQMRKEGVQ---PDIHTYTSFINACC--------------KAGDMQN 776
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
A V+ M KP+ Y LI R +KA
Sbjct: 777 -ATQVIKEMEARGIKPNLKTYTTLIHGWARAAFPEKA 812
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L + +++ AF + + + G PD ++ N ++ G + A
Sbjct: 516 YSMLFNGFVKLKDWANAFSVFEDITKDGLKPD--------VILYNNIVKAFCGMGNMDRA 567
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS-- 122
+ I++ M T +F ++ GF R GE R+A ++ D M +S + + +
Sbjct: 568 ICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEI---FDTMRRSGCIPTVHTYNAL 624
Query: 123 --GDVYWSLMGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGD 170
G V M K +LDE+N YT+L+ Y + G+ KA L + G
Sbjct: 625 ILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGL 684
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y+ L+ K R Q A L++ + + P TF I
Sbjct: 685 EIDVYTYEALLKACCKSGRMQSA----LAVTKEMSSKKIPRNTFVYNI------------ 728
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
L+ G+ R EAA ++ M +PD Y I C+
Sbjct: 729 -LIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKA 771
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ A+ ++ +C GE +A D M G PSLVT N LI G
Sbjct: 249 SVAWNAMISGFCQNGEIGQAQKYFDAMQKDGV--------EPSLVTWNILISCYNQLGHC 300
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNM----- 115
+ A++++R M G+ PD ++T+++SGF + G + A DL EM +++NN+
Sbjct: 301 DLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASA 360
Query: 116 ----LAIQPLSGDVYWSLMGKQGGLLDEVNY-TSLINAYCADGEVVKAKTLLDELT 166
A++ LS + + + L+D V SLI+ YC G++ A+ + D ++
Sbjct: 361 ASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMS 416
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ +L+ Y KG+F +A + +QM+ +G PD LVT N L+ G GR +E
Sbjct: 462 AWNSLISGYSFKGQFGEAVKLLNQMVEEGITPD--------LVTWNGLVSGYSMQGRIDE 513
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLS 122
AL I+ + G+ P+ VS+TA++SG + + A + +M E ++ N+ L
Sbjct: 514 ALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLC 573
Query: 123 GDVYWSLMGK---------QGGLLDEVNY-TSLINAYCADGEVVKAKTLLDEL 165
SL+ K + G +D++ T+LI+ Y G++ A + +++
Sbjct: 574 ACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKI 626
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 56/302 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ C + A+ +M+ KG +PD + T N LIH L G+ E
Sbjct: 291 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPD--------VFTYNILIHALCKEGKISE 342
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M +M + PD +S+ ++ G G++ +A DL L M NN + Q +
Sbjct: 343 ACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCM-----LNNFMVPQAIIW 397
Query: 124 DVYWSLMGK----------------QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
++ G+ G L + Y +LI A G + A +L +E+
Sbjct: 398 NLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRT 457
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
V Y++LI G L L + LC D +++ +
Sbjct: 458 KNLRPDVVTYNLLIGGAINIGD--------LDLAHQLC---------DEMVQRGREPDLI 500
Query: 228 SLVELVKGF----RIRDLENEAASVLNTMLHWNDK-PDGAVYNFLIVEHCRCDNGDKAYD 282
+ E ++G+ I + E A +L + L W+D P ++N ++C+ +A++
Sbjct: 501 TCTEFIRGYCIIGNIEEAEERYARILKSGL-WSDHVPVQILFN----KYCKLGEPIRAFN 555
Query: 283 MY 284
Y
Sbjct: 556 FY 557
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 54/276 (19%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G+ + A+ + +M+ KG LPD T N +++GL GR E A ++R M
Sbjct: 122 CLEGKLAAAWWLRIKMMEKGVLPDVYTH--------NHIVNGLCENGRMENADFLVRQML 173
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ G P+ +++ ++ G++ + KA D++ ++ + IQP
Sbjct: 174 KSGPHPNCITYNTLIKGYYAVHNTEKA-------DDLFRTMSNTGIQP------------ 214
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS---VIYDVLISGLDKKAR 189
+ V ++ A C G + KA+ +LD++ + + + V L+ K +
Sbjct: 215 -----NRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGK 269
Query: 190 TQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVL 249
+ +A + ++ +I+ C+ + + L+ G + A
Sbjct: 270 SNQALGL-----------------WNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYA 312
Query: 250 NTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
ML PD YN LI H C G + Y+
Sbjct: 313 CEMLKKGLIPDVFTYNILI--HALCKEGKISEACYL 346
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 61/327 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV----------------------- 38
Y + +++ C+ G A + QM+ G P+ +
Sbjct: 146 VYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFR 205
Query: 39 ----TEFSPSLVTCNALIHGLGFFGRAEEALEILRGM---PEMGLFPDTVSFTAVVSGFF 91
T P+ VTCN ++ L G E+A +L + PD V+ T ++ +F
Sbjct: 206 TMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYF 265
Query: 92 RIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGGLLDEV 140
+ G+ +A L EM + +++A L V Y M K+G + D
Sbjct: 266 KNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVF 325
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL-- 198
Y LI+A C +G++ +A L ++ + + Y ++I GL AK +LL
Sbjct: 326 TYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCM 385
Query: 199 --------SLVYHLCTSSWPT--------LTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
+++++L S+ LT D ++ + N FT ++ + ++
Sbjct: 386 LNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNI 445
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLI 268
N A S+ M N +PD YN LI
Sbjct: 446 HN-AHSLKEEMRTKNLRPDVVTYNLLI 471
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 39/200 (19%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
SP++VT ALI G G+ EEAL + + M + P+ +F +V F + G++ +A
Sbjct: 27 ISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAK 86
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
++ ++ MM+ + L DV V Y+SL+N YC EV KA++
Sbjct: 87 NV---LNTMMEKD-------LKSDV--------------VAYSSLMNGYCLVNEVFKAQS 122
Query: 161 LLD-----ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTF 214
+ EL++ DVR Y+++I+ K EA K+ + +P +T+
Sbjct: 123 IFKTMAERELSY--DVRS---YNIMINEFCKMKMVDEAIKLFEEMPLK---QIFPDVVTY 174
Query: 215 DTLIEN-CSNNEFTSLVELV 233
TLI+ C + + +ELV
Sbjct: 175 HTLIDGLCKSGRLSYAMELV 194
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G+ +A + +MI + +P++ T N L+ G+ EE
Sbjct: 33 TYTALIDGFCVVGKLEEALGLFKKMISENI--------NPNVYTFNGLVDAFCKEGKIEE 84
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L M E L D V+++++++G+ + E+ KA + M E S ++ + +
Sbjct: 85 AKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMIN 144
Query: 124 DVYWSLMGKQGGLL-----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ M + L D V Y +LI+ C G + A L+DE+ G+
Sbjct: 145 EFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPP 204
Query: 173 QSVIYDVLISGLDK 186
+ Y ++ L K
Sbjct: 205 NIITYCPIVDVLCK 218
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--PSLVTCNALIHGLGFFG 59
Y Y L+ +C + F+ +M T F P +VT N L+ GL G
Sbjct: 226 TYTYNILIRGFCKNSMVDEGFYFFKEM----------TSFDCDPDVVTYNTLVDGLCRAG 275
Query: 60 RAEEALEILRGMPEM--GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA 117
+ + A ++ GM + L PD V++T ++ G+ R E+ +A D+ EM+ N++
Sbjct: 276 KIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335
Query: 118 ----IQPLSGDVYWSLM--------GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
I+ L W M G G + D + +LIN++C G + +A + + +
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395
Query: 166 THFGDVRQSVIYDVLISGLDKKA 188
S Y VLI L +K
Sbjct: 396 KKLEVSADSASYSVLIRTLCQKG 418
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 53/270 (19%)
Query: 15 KGEFSKAFHMHDQMIHK-GFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPE 73
+G + A ++D+M+ G PD T N LI G +E + M
Sbjct: 203 RGRTNMAKEVYDEMLKTYGVKPD--------TYTYNILIRGFCKNSMVDEGFYFFKEMTS 254
Query: 74 MGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQ 133
PD V++ +V G R G+++ A++L M + + LS DV
Sbjct: 255 FDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSK--------KCKDLSPDV-------- 298
Query: 134 GGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
V YT+LI YC EV +A +L+E+ G V Y+ LI GL + + +
Sbjct: 299 ------VTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKM 352
Query: 194 KKMLLSLVYHLCTSSWP-TLTFDTLIEN--CSNNEFTSLVELVKGFRIRDLENEAASVLN 250
K++L + S P TF+TLI + C+ N +EA V
Sbjct: 353 KEILEQMKGD--GGSIPDACTFNTLINSHCCAGN-----------------LDEAFKVFE 393
Query: 251 TMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
M D A Y+ LI C+ + KA
Sbjct: 394 NMKKLEVSADSASYSVLIRTLCQKGDYGKA 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 46/258 (17%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N+LI G G +E++++ M +G+ P V+F +V+ + G A ++ DE
Sbjct: 159 NSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEV---YDE 215
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
M+++ ++P D Y LI +C + V + E+T F
Sbjct: 216 MLKT---YGVKP-----------------DTYTYNILIRGFCKNSMVDEGFYFFKEMTSF 255
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFT 227
V Y+ L+ GL + + + A ++ + S +T+ TLI C E
Sbjct: 256 DCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVD 315
Query: 228 SLVELVKGFRIRDLENEAASVLNTML-------HWNDK--------------PDGAVYNF 266
+++++ R L+ + NT++ W+ PD +N
Sbjct: 316 EALDILEEMNGRGLKPNIVTY-NTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNT 374
Query: 267 LIVEHCRCDNGDKAYDMY 284
LI HC N D+A+ ++
Sbjct: 375 LINSHCCAGNLDEAFKVF 392
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 56/302 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ C + A+ +M+ KG +PD + T N LIH L G+ E
Sbjct: 310 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPD--------VFTYNILIHALCKEGKISE 361
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M +M + PD +S+ ++ G G++ +A DL L M NN + Q +
Sbjct: 362 ACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCM-----LNNFMVPQAIIW 416
Query: 124 DVYWSLMGK----------------QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
++ G+ G L + Y +LI A G + A +L +E+
Sbjct: 417 NLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRT 476
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT 227
V Y++LI G L L + LC D +++ +
Sbjct: 477 KNLRPDVVTYNLLIGGAINIGD--------LDLAHQLC---------DEMVQRGREPDLI 519
Query: 228 SLVELVKGF----RIRDLENEAASVLNTMLHWNDK-PDGAVYNFLIVEHCRCDNGDKAYD 282
+ E ++G+ I + E A +L + L W+D P ++N ++C+ +A++
Sbjct: 520 TCTEFIRGYCIIGNIEEAEERYARILKSGL-WSDHVPVQILFN----KYCKLGEPIRAFN 574
Query: 283 MY 284
Y
Sbjct: 575 FY 576
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 48/273 (17%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G+ + A+ + +M+ KG LPD T N +++GL GR E A ++R M
Sbjct: 141 CLEGKLAAAWWLRIKMMEKGVLPDVYTH--------NHIVNGLCENGRMENADFLVRQML 192
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ G P+ +++ ++ G++ + KA D++ ++ + IQP
Sbjct: 193 KSGPHPNCITYNTLIKGYYAVHNTEKA-------DDLFRTMSNTGIQP------------ 233
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ V ++ A C G + KA+ +LD++ D D++
Sbjct: 234 -----NRVTCNIIVRALCEKGHLEKARNMLDKI--LNDDNGEATPDLV------------ 274
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTM 252
A L+ + S+ ++ +I+ C+ + + L+ G + A M
Sbjct: 275 ASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEM 334
Query: 253 LHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
L PD YN LI H C G + Y+
Sbjct: 335 LKKGLIPDVFTYNILI--HALCKEGKISEACYL 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 128/326 (39%), Gaps = 61/326 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV------------------------ 38
Y + +++ C+ G A + QM+ G P+ +
Sbjct: 166 YTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRT 225
Query: 39 ---TEFSPSLVTCNALIHGLGFFGRAEEALEILRGM---PEMGLFPDTVSFTAVVSGFFR 92
T P+ VTCN ++ L G E+A +L + PD V+ T ++ +F+
Sbjct: 226 MSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFK 285
Query: 93 IGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGGLLDEVN 141
G+ +A L EM + +++A L V Y M K+G + D
Sbjct: 286 NGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFT 345
Query: 142 YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL--- 198
Y LI+A C +G++ +A L ++ + + Y ++I GL AK +LL
Sbjct: 346 YNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDLLLCML 405
Query: 199 -------SLVYHLCTSSWPT--------LTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
+++++L S+ LT D ++ + N FT ++ + ++
Sbjct: 406 NNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILAQLKSGNIH 465
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLI 268
N A S+ M N +PD YN LI
Sbjct: 466 N-AHSLKEEMRTKNLRPDVVTYNLLI 490
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C + AF ++ +M+ K D + T NALI G + +A
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLD--------VFTYNALISGFSAVSKLNDA 53
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------------DEMMQS 112
+ + M + PD +F +V GF + G +++A ++ M +M
Sbjct: 54 IGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDG 113
Query: 113 NNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
++ + +++ S M +G + + +YT++IN +C V +A L +E+ +R
Sbjct: 114 YCLINEVNKAKEIFDS-MAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIR 172
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
+IY LI GL K R A K++
Sbjct: 173 NVLIYSFLIDGLCKSGRISYALKLV 197
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 18 FSKAFHMHDQMIHKGFLPDFVTE-FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
FS ++D + G E +P + T N L+ G GR +EA +L M + +
Sbjct: 44 FSAVSKLNDAI---GLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDI 100
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP----LSGDVYWSLMGK 132
P V++++++ G+ I E+ KA ++ D M M +Q ++G ++ +
Sbjct: 101 KPRVVTYSSLMDGYCLINEVNKAKEI---FDSMAARGVMANVQSYTTMINGFCKIKMVDE 157
Query: 133 QGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
L +E+ Y+ LI+ C G + A L+DE+ G VIY ++
Sbjct: 158 AINLFEEMRCRKIIRNVLIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILD 217
Query: 183 GLDKKARTQEA 193
L K R +A
Sbjct: 218 ALCKNHRVDQA 228
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 57/269 (21%)
Query: 21 AFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDT 80
A+ ++ +MI K PD VT FS +LI+G G+ ++A + M + D
Sbjct: 153 AYGLYSEMIAKKIYPDVVT-FS-------SLIYGFCIVGQFKDAFRLFHEMVLKNINRDV 204
Query: 81 VSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEV 140
+F +V + G+++ A N+LA+ M K+G + D V
Sbjct: 205 YTFNILVDALCKEGDVKVA-------------KNLLAV-----------MMKEGVIPDVV 240
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
Y SL++ YC EV KAK + + ++ G + Y ++I+G K EA LSL
Sbjct: 241 TYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEA----LSL 296
Query: 201 VYHLCTSSWP--TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
+ T+T+++LI+ L K RI A +++TM H N +
Sbjct: 297 FDEMRRRGIAPNTVTYNSLIDG-----------LCKSGRIP----YAWELVDTM-HNNGQ 340
Query: 259 P-DGAVYNFLIVEHCRCDNGDKAY--DMY 284
P D YN LI C+ + D+ DMY
Sbjct: 341 PADIFTYNSLIDALCKNHHIDQGIQPDMY 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM YC E +KA H+ + + G PD T + +I+G +E
Sbjct: 241 TYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTY--------SIMINGFCKIKMVDE 292
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + M G+ P+TV++ +++ G + G + A++L M Q ++ L
Sbjct: 293 ALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLID 352
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK-----------------TLLDELT 166
+ + QG D Y LI+ C G + A+ L+ ++
Sbjct: 353 ALCKNHHIDQGIQPDMYTYNILIDGLCKGGRLKNAQDIFQDLLIKEGLFDEVDALMSKMD 412
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G + +V Y +I L K ++A+K+L ++
Sbjct: 413 DNGIIPDAVTYVTIIRALFHKDENEQAEKLLREMI 447
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 110/270 (40%), Gaps = 49/270 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ C +G+ A ++ M+ +G +PD +VT +L+ G
Sbjct: 204 VYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPD--------VVTYGSLMDGYCLVNEV 255
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A + + +MG+ PD +++ +++GF +I + +A L DEM
Sbjct: 256 NKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSL---FDEMR----------- 301
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
++G + V Y SLI+ C G + A L+D + + G Y+ LI
Sbjct: 302 ----------RRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLI 351
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIEN-CSNNEFTSLVELVKGFRIR 239
L K +H+ P + T++ LI+ C + ++ + I+
Sbjct: 352 DALCKN--------------HHIDQGIQPDMYTYNILIDGLCKGGRLKNAQDIFQDLLIK 397
Query: 240 D-LENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ L +E ++++ M PD Y +I
Sbjct: 398 EGLFDEVDALMSKMDDNGIIPDAVTYVTII 427
>Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3110709-3109039 | 20130731
Length = 508
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
YAY + +C++ + KA + M G +PDF +SP L G G+
Sbjct: 180 VYAYAAAIRGFCNEMKLDKAEDVFYDMKSWGLVPDFHV-YSP-------LTRGYCETGKD 231
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
E +++ + + + LF D V++ V+ ++G++ A ++E+ N L I+
Sbjct: 232 SEVVDLFKEIKQSCLFLDGVAYNIVLDSLCKLGKVDDAVS---TLEELTSMNIDLDIK-- 286
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+YT+LIN YC G+ V+A+ L E+ G V Y+VL
Sbjct: 287 -------------------HYTTLINGYCLQGKTVEAQCLFKEMEEKGFKPDVVAYNVLA 327
Query: 182 SGLDKKARTQEAKKMLLSL 200
+GL +K E +L+ +
Sbjct: 328 AGLFRKDLDSEVIDLLIYM 346
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 60/268 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKG-FLPDFVT---------------------EF 41
Y LM C G +AF + ++M+ K +PD +T EF
Sbjct: 275 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEF 334
Query: 42 ------SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
P++ +AL+ GL G+ ++A +L M GL PD +++T++++ F R G+
Sbjct: 335 MKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQ 394
Query: 96 LRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEV 155
+ +A +L EM E N+ A D V + ++ C +G
Sbjct: 395 IDEAIELLTEMKE----NDCQA--------------------DTVTFNVILGGLCREGRF 430
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML-----LSLVYHLCTSSWP 210
+A ++++L G Y ++++ L + ++A K+L V H TS+
Sbjct: 431 DEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSN-- 488
Query: 211 TLTFDTLIENCSNNEFTSLVELVK-GFR 237
L E +N+ T+L +LV GF+
Sbjct: 489 ELLVRLCKEGMANDAATALFDLVDMGFQ 516
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL-FPDTVSFTAVVSGFFRIGELRKA 99
+ P++ N L+ G + A E+++ M +P+ ++++ ++ G R G L++A
Sbjct: 233 YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEA 292
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
++L +EM+ + ++ D + Y LIN +C +G+ +A+
Sbjct: 293 FEL---FEEMVSKDQIVP--------------------DPLTYNVLINGFCREGKADRAR 329
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+++ + + G Y L+ GL K + Q+AK +L + L D +
Sbjct: 330 NVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEM-------KSSGLKPDAIT- 381
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
+TSL+ F +EA +L M + + D +N ++ CR D+
Sbjct: 382 ------YTSLINF---FSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDE 432
Query: 280 AYDM 283
A DM
Sbjct: 433 ALDM 436
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 55/296 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +G+ KA + + + KG + N L+ GL + GR +EA+EI
Sbjct: 187 LINSLCKRGKVKKAMEVFEFLERKGL--------KLGVQAYNCLLRGLAYVGRVDEAVEI 238
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L M + D S++AV++G ++G +A +L DE + + ++P
Sbjct: 239 LMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMEL---FDEAVG----VGLRP------- 284
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
D V + +LI Y +G ++ +L + G V + Y ++ GL K
Sbjct: 285 ----------DVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKW 334
Query: 188 ARTQEA---------------KKMLLSLVYHLCTSSW--------PTLTFDTLIENCSNN 224
T EA +M+ +LV LC SW F+ + E
Sbjct: 335 NETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGLVV 394
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ ++ +V+ + +EA LN M+ W +G + +I C D+A
Sbjct: 395 DKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCGQGRVDEA 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y +M C G +A + D+ + G PD +VT NALI G GR
Sbjct: 251 VYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPD--------VVTFNALIEGYSREGRE 302
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-------DEMMQSNN 114
E + +L+ M E G D +++ V+ G + E +A+ + EM D M
Sbjct: 303 MEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTL 362
Query: 115 MLAIQPLS---------GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ + LS + M ++G ++D+ ++ A + +A L+++
Sbjct: 363 VRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDM 422
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
+G + + ++ +I GL + R EA LL L
Sbjct: 423 VRWGYSLEGIAFEEVIEGLCGQGRVDEAVSTLLLL 457
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C K E +A + ++ GF PD T LI+ L G+ ++
Sbjct: 148 TYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSAT--------ITVLINSLCKRGKVKK 199
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E+ + GL ++ ++ G +G + +A ++ ++ M++ N +
Sbjct: 200 AMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMD----MKTGN------IGV 249
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
DVY +Y++++N C G +A L DE G V ++ LI G
Sbjct: 250 DVY--------------SYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEG 295
Query: 184 LDKKARTQEAKKMLLSLVYHLCTS 207
++ R E +L + H C +
Sbjct: 296 YSREGREMEGVGVLKMMKEHGCVA 319
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT-------------EFSPSLVTCNALIHG 54
L+ C E KA H HD +I KGF D V+ +P + +I+
Sbjct: 51 LLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINR 110
Query: 55 LGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNN 114
L +A ++ M +FPD V++ ++ GF +G+L A L EM N
Sbjct: 111 LCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPN 170
Query: 115 MLAIQPL------SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD 163
+ + L GDV ++M KQ D V +SLI+ Y + KA+ + +
Sbjct: 171 VCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFN 230
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+ G Y+++I+GL K EA + + + T T+T+ TLI+
Sbjct: 231 AMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPD--TITYSTLID 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 19 SKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFP 78
+KA ++ + M G D L + N +I+GL +EA+ + + M + P
Sbjct: 223 NKARYIFNAMAQNGVTID--------LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTP 274
Query: 79 DTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLD 138
DT++++ ++ G ++G + +DL EM +S N+
Sbjct: 275 DTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANV----------------------- 311
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+ Y+SL+N C G A + ++ G V Y++L+ GL K R ++A+++
Sbjct: 312 -ITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFH 370
Query: 199 SLV 201
L+
Sbjct: 371 DLL 373
>Medtr2g007030.1 | PPR containing plant-like protein | HC |
chr2:800464-794904 | 20130731
Length = 627
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 41/245 (16%)
Query: 48 CNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE--------LRKA 99
CN+++ L G+ + +++ R M GL PD V+++ +++G ++ + +++
Sbjct: 141 CNSVLSCLIKKGKFDTTMKLFRQMKHDGLVPDLVTYSTLIAGCVKVKDGYPKALELIQEL 200
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSG-----DVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
D KL MD+++ +LA+ +G + Y++ M +G + +Y+SL+NAY A G+
Sbjct: 201 QDNKLRMDDVIYGA-ILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSLLNAYSACGD 259
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLIS-----GLDKKARTQEAKKMLLSLVYHLCTSSW 209
KA L+ ++ G VI L+ GL +K+R AK L SL Y
Sbjct: 260 FTKADALIQDMESEGLAPNKVILTTLLKVYVRGGLFEKSRELLAK--LESLGY------- 310
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
+ +E V L+ G +EA + + M+ + DG ++ +I
Sbjct: 311 ------------AEDEMPYCV-LMDGLAKARQTHEAKIIFDEMMKKHVMSDGYAHSIIIS 357
Query: 270 EHCRC 274
CR
Sbjct: 358 AFCRA 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 107/271 (39%), Gaps = 35/271 (12%)
Query: 15 KGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEM 74
KG+F + QM H G +PD VT +S + C + G +ALE+++ + +
Sbjct: 151 KGKFDTTMKLFRQMKHDGLVPDLVT-YSTLIAGCVKVKDGY------PKALELIQELQDN 203
Query: 75 GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-----------SG 123
L D V + A+++ G+ +A +M +S N+ L
Sbjct: 204 KLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSLLNAYSACGDFTKA 263
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D M +G ++V T+L+ Y G K++ LL +L G + Y VL+ G
Sbjct: 264 DALIQDMESEGLAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLGYAEDEMPYCVLMDG 323
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K +T EAK + FD +++ ++ + ++ F L
Sbjct: 324 LAKARQTHEAK-----------------IIFDEMMKKHVMSDGYAHSIIISAFCRAKLFQ 366
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
EA + DK D + N ++ CR
Sbjct: 367 EAKQLAKDFQTTFDKYDVVIMNSMLCAFCRA 397
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P ++ C +I L G+ +ALEIL + E G+ PD V +T V+SG + G+ K
Sbjct: 251 FCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVK-- 308
Query: 101 DLKLEMDEMMQSNNMLAIQP--LSGDVYWSLMGKQ----------------GGLLDEVNY 142
+DE+ +L + P + +VY + + KQ G + V Y
Sbjct: 309 -----LDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTY 363
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVY 202
+L+ A C G++ KAK ++ E+ G Y +++ GL K EA +L
Sbjct: 364 NTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLL----- 418
Query: 203 HLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
+ ++E C ++ +V + L ++A ++N ++ + P
Sbjct: 419 ------------EEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIVAKSFDPGAK 466
Query: 263 VYNFLIV 269
V+ L++
Sbjct: 467 VWEALLL 473
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 62/279 (22%)
Query: 42 SPSLVTCNALIHG----------LGFF-------------------------GRAEEALE 66
SP++VT +ALI G + FF GR +EA
Sbjct: 7 SPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKN 66
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
+L M + G+ PD V++ +++ G+ + E+ KA K ++ +S ++ + S V
Sbjct: 67 VLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKK-KCIANKFFRS-TLIDVLCKSRRVS 124
Query: 127 WSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
++L M +G D + Y S+++A C KA LL +L G Y +L+
Sbjct: 125 YALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILV 184
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL + + ++A+K+ L Y+L ++ +++GF + L
Sbjct: 185 KGLCRSGKLEDARKVFEDLGYNLDVYAYTV--------------------MIQGFCDKGL 224
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+E ++L+ M PD Y +I+ D D A
Sbjct: 225 FDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMA 263
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 42/232 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPD------FVTEF-------------------- 41
L+ C G+ KA H H+ +++ PD F+ EF
Sbjct: 51 LLKALCLNGDVQKALHFHENIVN----PDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQG 106
Query: 42 -SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++VT +AL+ G +A M +G+ D ++ V++GF + + +A
Sbjct: 107 MKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEAL 166
Query: 101 DLKLEM------DEMMQSNNMLAIQPLSGDV--YWSL---MGKQGGLLDEVNYTSLINAY 149
DL EM ++ N ++ SG + W L M G DE+ Y S ++ +
Sbjct: 167 DLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTF 226
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
C + ++ KA L+ E+ + G +LI GL K R ++A+++ L+
Sbjct: 227 CKNHQLDKAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLL 278
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY-- 100
P +VT N LI+ + A + + +MG P+ ++ T ++ G+++KA
Sbjct: 8 PDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKALHF 67
Query: 101 ----------DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYC 150
+ +DE NM + + G +M QG + V Y++L++ YC
Sbjct: 68 HENIVNPDVCTFNIFIDEFCLQGNMKEAKNILG-----VMMIQGMKPNVVTYSALMDGYC 122
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP 210
V KAK + + G + Y+++I+G K EA + + + P
Sbjct: 123 LLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEM---YSKNIIP 179
Query: 211 TL-TFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVL-NTMLHW---NDKPDGAV 263
T+ T++T+I+ C + + +LV+ +RD+ A + N+ LH N + D A+
Sbjct: 180 TIVTYNTVIDGLCKSGRISYAWKLVR--EMRDMGQPADEITYNSFLHTFCKNHQLDKAI 236
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++G EF ++ +QM+ G P+ +VT N LIH G
Sbjct: 407 GHTYTTMVGILGRAREFGAINNLLEQMVKDGCQPN--------VVTYNRLIHSYGRANYL 458
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EAL + M E PD V++ ++ + G L D+ + M E MQ + + P
Sbjct: 459 KEALNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYL----DVAMSMYERMQ---QVGLSP- 510
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D Y+ +IN G + A L E+ G V V Y+++I
Sbjct: 511 ----------------DTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMI 554
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L KAR EA L L + + + +T+ ++E + +
Sbjct: 555 A-LQAKARNYEAA---LKLYRDMQNAGFRPDKVTYSIVMEVLGHCGY------------- 597
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LE EA +V M N PD VY L+ + N +KA++ Y
Sbjct: 598 -LE-EAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWY 640
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 21 AFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDT 80
A +D M +G PD +VT N LIHG F + +EA + M L P+
Sbjct: 258 AVRFYDDMKSRGIEPD--------VVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNV 309
Query: 81 VSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------------SGDVYWS 128
+S+T ++ GF +G++ +A+++ EM + N + L +G+V
Sbjct: 310 ISYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGE 369
Query: 129 LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKA 188
++ + D + L+ C G + A +L+ + ++ Y VLI K
Sbjct: 370 MVERYIAPKDNSVFMKLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKAN 429
Query: 189 RTQEAKKMLLSLV 201
A+K+L L+
Sbjct: 430 VYDRAEKLLDKLI 442
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 50/278 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L +G + A +++ M+ +G P+ T N L+ G+ + +
Sbjct: 206 AYDALFKVILRRGRYMMAKRVYNAMLREGI--------EPTRHTYNILLWGMFLSLKLDT 257
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ M G+ PD V++ ++ GFFR ++ +A L +E M+ N++
Sbjct: 258 AVRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVE----MKGKNLMP------ 307
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ ++YT+++ + G+V +A + +E+ G +V + L+ G
Sbjct: 308 --------------NVISYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPG 353
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL-VKGFRIRDLE 242
L + EA +L +V + I N+ F L+E KG +
Sbjct: 354 LCDADKMVEAGNVLGEMV-------------ERYIAPKDNSVFMKLMECQCKGGNL---- 396
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ A VLN M+ + + Y LI C+ + D+A
Sbjct: 397 DAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRA 434
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 46/246 (18%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++VT N LIH L G ++ +IL+ M E + P V++ +++ + G L ++ L
Sbjct: 318 PNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISL 377
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
++M + S D+ V Y +L+NA C +G + ++ LL
Sbjct: 378 YIKM----------VSENCSPDI--------------VTYNTLLNALCKEGFIDESIQLL 413
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-C 221
L+ V Y+++I+GL + + AK+M +V + +T TL+ C
Sbjct: 414 HSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDY--ITHRTLVWGLC 471
Query: 222 SNNEFTSLVELVK-----GFRIRDLE--------------NEAASVLNTMLHWNDKPDGA 262
+F VE+ K G +I+ + A L+ M+ KPDG
Sbjct: 472 QVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGK 531
Query: 263 VYNFLI 268
+Y L+
Sbjct: 532 IYYTLL 537
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 36/289 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C +G+ + A + + M +P F PS C LI GL G+ ++ +I
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHF-----PS---CTNLIRGLIRIGQVDKGCKI 167
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD------LKLEMDEMMQSNNMLAIQPL 121
+ M G PDT++F AV+ + G L+ A + L + + N ++
Sbjct: 168 MNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFD 227
Query: 122 SGD-----VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
GD +W ++G + Y L+ C +A +L+++ G +
Sbjct: 228 KGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINM 287
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+ L++ K+ ++ ++ +L+ H + +T++ LI + S + ++ +V+
Sbjct: 288 YNSLVNFSSKQGNYKDTALVISNLLSHGMQPN--VVTYNILIHSLSLHGYSDVVD----- 340
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
+L M + P YN L+ C+ D++ +Y+
Sbjct: 341 ----------DILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYI 379
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 46/246 (18%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++VT N LIH L G ++ +IL+ M E + P V++ +++ + G L ++ L
Sbjct: 318 PNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISL 377
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
++M + S D+ V Y +L+NA C +G + ++ LL
Sbjct: 378 YIKM----------VSENCSPDI--------------VTYNTLLNALCKEGFIDESIQLL 413
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-C 221
L+ V Y+++I+GL + + AK+M +V + +T TL+ C
Sbjct: 414 HSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDY--ITHRTLVWGLC 471
Query: 222 SNNEFTSLVELVK-----GFRIRDLE--------------NEAASVLNTMLHWNDKPDGA 262
+F VE+ K G +I+ + A L+ M+ KPDG
Sbjct: 472 QVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGK 531
Query: 263 VYNFLI 268
+Y L+
Sbjct: 532 IYYTLL 537
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 36/289 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C +G+ + A + + M +P F PS C LI GL G+ ++ +I
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHF-----PS---CTNLIRGLIRIGQVDKGCKI 167
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD------LKLEMDEMMQSNNMLAIQPL 121
+ M G PDT++F AV+ + G L+ A + L + + N ++
Sbjct: 168 MNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFD 227
Query: 122 SGD-----VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
GD +W ++G + Y L+ C +A +L+++ G +
Sbjct: 228 KGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINM 287
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+ L++ K+ ++ ++ +L+ H + +T++ LI + S + ++ +V+
Sbjct: 288 YNSLVNFSSKQGNYKDTALVISNLLSHGMQPN--VVTYNILIHSLSLHGYSDVVD----- 340
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
+L M + P YN L+ C+ D++ +Y+
Sbjct: 341 ----------DILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYI 379
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ C G S A+ + DQM +G D ++T N+ +H L + ++
Sbjct: 150 TYNSLIDGLCKSGRISHAWELLDQMHDRGQPAD--------VITYNSFLHALCKNHQVDK 201
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +++ + + G+ P+ +++ ++ G + G L A
Sbjct: 202 AIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENA------------------------ 237
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V + + +G + YT +IN C +G +A TLL+++ G + +V Y +I
Sbjct: 238 QVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYATIIHA 297
Query: 184 LDKKARTQEAKKMLLSLV 201
L K +A+K+L ++
Sbjct: 298 LFKNDENDKAEKLLREMI 315
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 71 MPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLM 130
M + G+ PDT S+ +++GF +I ++ +A +L + M N++
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF----KKMHCKNIIP------------- 43
Query: 131 GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKART 190
+ V YTSLI+ C G++ A L+DE+ G + Y ++ L K +
Sbjct: 44 -------NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 96
Query: 191 QEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLN 250
+A +L L F+ L N + + +++GF ++ L NEA ++L+
Sbjct: 97 DKAIALLTKL---------KDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLS 147
Query: 251 TMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
M PD Y +I+ + D D A
Sbjct: 148 KMEDNGCIPDAKTYEIIILSLFKKDENDMA 177
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 24/198 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++ +C + +A ++ +M K +P+ VT S LI GL G+
Sbjct: 12 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTS--------LIDGLCKSGKISY 63
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL+++ M + G+ PD +++++++ + ++ KA L + L
Sbjct: 64 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL---------------LTKLKD 108
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V+ L K G LD YT +I +C G +A LL ++ G + + Y+++I
Sbjct: 109 QVFEDLFVK-GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILS 167
Query: 184 LDKKARTQEAKKMLLSLV 201
L KK A+K+L ++
Sbjct: 168 LFKKDENDMAEKLLREMI 185
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 47/238 (19%)
Query: 51 LIHGLGFFGRAEEALEIL--RGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
LI L G A EA E L R ++G P + +++G+FR +L+ A L
Sbjct: 223 LIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERL------ 276
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
W M + V Y +L+ YC V KA ++ E+T
Sbjct: 277 ------------------WEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKE 318
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFT 227
G +++Y+ +I L + R +EA M+ +H+ PTL T+++
Sbjct: 319 GIKPNAIVYNPIIDALAEAGRFKEALGMMER--FHVLQIG-PTLSTYNS----------- 364
Query: 228 SLVELVKGF-RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LVKGF + D+E A+ +L M+ P YN+ RC D+ ++Y
Sbjct: 365 ----LVKGFCKAGDIEG-ASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLY 417
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 126/313 (40%), Gaps = 64/313 (20%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ +C G+ +AF + QM+ K PD + T N L+ L G+ +EA
Sbjct: 237 SLIYGFCIVGQLKEAFGLFYQMLLKNINPD--------IYTFNILVDVLCKEGKIKEAKN 288
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-----------------KLEM-DE 108
++ M + G+ PD V++ +++ G+ + E+ +A + K++M DE
Sbjct: 289 VIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDE 348
Query: 109 MMQSNNMLAIQPLSGD--VYWSL-------------------MGKQGGLLDEVNYTSLIN 147
+ N + + ++ D Y SL M G + Y SLI+
Sbjct: 349 ALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLID 408
Query: 148 AYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS 207
A C + V KA L+ ++ G Y +LI GL K+ R ++A+
Sbjct: 409 ALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQ------------- 455
Query: 208 SWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
+ F L+ N + ++ G + L +EA ++L+ M PD Y +
Sbjct: 456 ----VIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPI 511
Query: 268 IVEHCRCDNGDKA 280
+ D DKA
Sbjct: 512 NRALFKNDENDKA 524
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 63/261 (24%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C + A+ ++ +MI K SP+++T N+LI+G G+ +EA + M
Sbjct: 208 CKHKFVTDAYELYSEMITK--------RISPNIITFNSLIYGFCIVGQLKEAFGLFYQML 259
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ PD +F +V + G++++A N++A+ M K
Sbjct: 260 LKNINPDIYTFNILVDVLCKEGKIKEA-------------KNVIAV-----------MMK 295
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG---DVRQ---------------- 173
+G D V Y SL++ YC EV +AK +L+ ++ G D++
Sbjct: 296 EGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNE 355
Query: 174 ---------SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSN 223
V Y+ LI GL K R A + + + H T+++LI+ C N
Sbjct: 356 MRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEM--HANGIPANIFTYNSLIDALCKN 413
Query: 224 NEFTSLVELVKGFRIRDLENE 244
+ + LVK + + ++++
Sbjct: 414 HHVDKAIVLVKKIKDQGIQSD 434
>Medtr2g078690.1 | PPR containing plant-like protein | HC |
chr2:32882427-32884704 | 20130731
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y + KG+ A + ++M + P +V CN +I GLGF R
Sbjct: 132 FTYATFIKAMTKKGKLGTALKLFNRMWKE-------ESCKPDVVICNCVIDGLGFKKRIP 184
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD 107
EAL++ M E G P+ ++ +++ +I + K Y+L +M+
Sbjct: 185 EALQVFHDMKEWGCLPNVATYNSLIKHLCKIRRMEKVYELIEDME 229
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+EA+ +L M + PDT ++T+++ G G +DL EM E Q N++
Sbjct: 95 VDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITYNS 154
Query: 121 LSGDVYWSLMGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
L + + K G+ + YT L++ C +G++ AK + +L G ++Y+V
Sbjct: 155 LLDALCKNHQIKDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNV 214
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIENCSNNEFTSLV 230
+++ L K+ EA +L + ++ CT T + L +N N++ L+
Sbjct: 215 MVNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVIRALFKNVKNDKAVKLL 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 22 FHMHDQMIHKG--FLPDFVTE-FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFP 78
HM+++M+ + L + ++ +P T +LI GL GR + +++ M E G
Sbjct: 88 LHMYNKMVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPA 147
Query: 79 DTVSFTAVVSGFFRIGELRKA------YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ +++ +++ + +++ Y L +D + ++ + + VY L+ K
Sbjct: 148 NVITYNSLLDALCKNHQIKDQGIQPNLYTYTLLVDGICKNGKLKDAKA----VYQDLLIK 203
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
G LD + Y ++N C +G +A ++L ++ H V Y+++I L K + +
Sbjct: 204 -GYHLDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVIRALFKNVKNDK 262
Query: 193 AKKMLLSLV 201
A K+L ++
Sbjct: 263 AVKLLCEMI 271
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P+LVT A+++ L GR +E ++R M E GL D V ++ V G+ L + +
Sbjct: 196 PNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFR- 254
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+M EM++ +G D V+YT LI+ + G+V K+ T L
Sbjct: 255 --KMREMVE---------------------KGICHDFVSYTILIDGFSKLGDVEKSFTFL 291
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
++ G + V Y ++S KK R +EA
Sbjct: 292 AKMIKEGIIPNKVTYTAIMSAYCKKGRIEEA 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 14/187 (7%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ + G+ K+F +MI +G +P+ VT + C GR EE
Sbjct: 270 SYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKK--------GRIEE 321
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQ 119
A + M +MG+ D F ++ GF R+G+ + + L +EM++ N++ +
Sbjct: 322 AFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVN 381
Query: 120 PLS--GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
LS G + + D V Y++L++ Y + V+ L G V+
Sbjct: 382 GLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMC 441
Query: 178 DVLISGL 184
+VLI L
Sbjct: 442 NVLIRAL 448
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 109/282 (38%), Gaps = 53/282 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ YC + KA +++ MI KG + V +V+C ++H G
Sbjct: 336 HVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCV------IVSC--ILHCFAEMGEDS 387
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
++ + + + G+F D V++ V F++G++ E+ M++ + I
Sbjct: 388 RVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMD-------EVAGMLEDLKSMHID--- 437
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D +YT+ I YC G+ KA + E+ G V Y+VL +
Sbjct: 438 --------------FDIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAA 483
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
GL EA + L Y P T +I ++GF
Sbjct: 484 GLCGNRHVSEAMDL---LNYMDSQGVKPNSTTHKII--------------IEGFCSEGKI 526
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA N+M +Y ++ +C D +K+Y+++
Sbjct: 527 EEAEGYFNSM----KDESVEIYTAMVSGYCEADLIEKSYELF 564
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 39/200 (19%)
Query: 2 AYAYVNLMGPYCDKG------------EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCN 49
+ Y L+ YC G +A + M+ KG +PD +V N
Sbjct: 225 VFTYTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPD--------VVAYN 276
Query: 50 ALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM 109
ALI G R ALE+ M + G P+ V++ + + + + E+ KA + + EM
Sbjct: 277 ALIDGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEF---LREM 333
Query: 110 MQSNNMLAIQPLSGDVYWSLMGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHF 168
+SN G+ G ++ +YT +I+A C G V A + L EL
Sbjct: 334 QRSN---------------YDGENGIVVGSCSSYTPIIHALCEVGRVADAWSFLVELIDN 378
Query: 169 GDVRQSVIYDVLISGLDKKA 188
G V + Y ++ GL K
Sbjct: 379 GSVPREYTYKLVCDGLRLKG 398
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ Y G+ SKA +++M G +PD T F SL ++ LG GR
Sbjct: 342 AVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPD--TPFYSSL------MYILGKAGRL 393
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++A E+ MP+ G+ D V++ ++S + A L EM+E ++ PL
Sbjct: 394 KDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPL 453
Query: 122 SGDVYWSL-----------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
M K D YT L+ + G++V+A T +E+ G
Sbjct: 454 LKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGF 513
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKM 196
+L L+ K+ +E ++
Sbjct: 514 TPMETTVKLLTRKLEIKSMLKEKDQI 539
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 33/176 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGF---FGRAEEA 64
L+ +C F KA + ++ GF PD + T N I F + +E
Sbjct: 278 LINGWCKVRNFEKARKVMEERKEHGFEPD--------VFTYNNFIESYCHDKDFRKVDEV 329
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
LE +RG G P+ V++T ++ G+ + G+L KA LE E M+ + ++ P
Sbjct: 330 LEEMRG---NGCPPNAVTYTILLLGYGKAGQLSKA----LEEYERMKKDGIVPDTPFYSS 382
Query: 125 VYWSL---------------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ + L M KQG + D V Y ++I+ CA + A LL E+
Sbjct: 383 LMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEM 438
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 120/332 (36%), Gaps = 75/332 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
+Y L+ YC G A + D+M+ G P+ +T
Sbjct: 147 SYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKL 206
Query: 40 --------EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFF 91
E S ++ LI L G E EI MP P+ V + ++ F
Sbjct: 207 WERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFC 266
Query: 92 RIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCA 151
++G A + VY LM K+ + +V+Y +I+
Sbjct: 267 KVGRYHGAARI----------------------VY--LMRKRRFVPSDVSYNHIIHGLSK 302
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-------- 203
DG+ ++ LL+E FG Y VL+ L + +A+++L ++Y
Sbjct: 303 DGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRI 362
Query: 204 -------LCTSSWPTLTFDTLI---ENCSNNEFTSLVELVKGFRIRDLENEAASVLNTML 253
LC + PT + L+ E+ + +L ++ GF +EA VLN ML
Sbjct: 363 YNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDML 422
Query: 254 HWN-DKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
PD + LI + D+A D++
Sbjct: 423 LGKFCAPDVVTFTTLISGLLDAEKVDEALDLF 454
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++V+ N+LI G A +ALE+ M G+ PD ++ +V S + +R+ +
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWS--------LMGKQGGLLDEVNYTSLINAYCADGEV 155
+ + + N L + D+Y L+ + L D V+ TS+++ Y V
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTF 214
A+ + + R V ++ LI+G + +EA ++ L L S WPT TF
Sbjct: 336 KAARLMFSNMME----RNVVSWNALIAGYTQNGENEEAVRLFLLLKRE---SIWPTHYTF 388
Query: 215 DTLIENCSN 223
L+ C+N
Sbjct: 389 GNLLNACAN 397
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 35/181 (19%)
Query: 16 GEFSKAFHMHD---QMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
G + H+HD +M G PD + T N LI G GR + A++I +
Sbjct: 441 GRLKQVSHIHDLYEKMKQDGPPPD--------IFTYNILISSYGRAGRVDSAVKIFEELE 492
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
PD +S+ ++++ + G++ +A+ EM E + L+ DV
Sbjct: 493 NSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQE----------KGLNPDV------- 535
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
V Y++LI + +V A +L DE+ G V Y++L+ L++ RT E
Sbjct: 536 -------VTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAE 588
Query: 193 A 193
A
Sbjct: 589 A 589
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 57/306 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------- 39
Y ++ C + AF ++ +M+ K PD +T
Sbjct: 53 YSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMT 112
Query: 40 --EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
+P + T N + GR +EA +L M + G+ P V++ +++G+ + E+
Sbjct: 113 AENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMN 172
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE--- 154
A D+ + M QS + I + M + + D V Y+SL++ G+
Sbjct: 173 MAKDI---FNTMNQSGVVKMIDEAIN--LYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPD 227
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
++ ++LD G Y + I GL + + ++A+K+ F
Sbjct: 228 IITYNSILD-----GIRPDMYTYTIFIKGLCQSGKLKDARKV-----------------F 265
Query: 215 DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
+ L+ N + + +++GF + L EA ++L+ M PD +Y +I+
Sbjct: 266 EDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSLFEK 325
Query: 275 DNGDKA 280
D D A
Sbjct: 326 DENDMA 331
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G AF + +++ G+ PD +T LI GL G +AL
Sbjct: 107 LINSFCQLGHNPFAFSVLAKILKNGYEPD--------TITFTTLIKGLCLKGDIHQALHF 158
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
+ MG D V + +++G ++GE + A +L +D + AI +
Sbjct: 159 HDKVIAMGFHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLIKKVDEAIN------LF 212
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
M + + D V Y SLI+ C G++ A L+DE+
Sbjct: 213 EEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEM 250
>Medtr5g096480.1 | PPR containing plant-like protein | HC |
chr5:42186367-42185891 | 20130731
Length = 158
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 13 CDKGE-FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
C +G + +A ++ D++ GF+PD VT NAL+ R +EAL++L+ M
Sbjct: 56 CRQGSLYEEAVNVFDRIKSAGFVPD--------RVTYNALLDVFAKVRRPKEALQVLKDM 107
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
G P+ +++ +++S R G L++ LK++M E
Sbjct: 108 ESNGFSPNVITYDSLISAHVRGGLLKEVSRLKVQMVE 144
>Medtr1g033840.1 | PPR containing plant-like protein | HC |
chr1:12239375-12241751 | 20130731
Length = 605
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +++ YC G+ KA + D+M+ KG F +V +++I G GR
Sbjct: 403 TYASMINVYCRLGQNIKAEKIFDEMMQKG--------FDKCVVAYSSMIVMYGRTGRLRN 454
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A++++ M E G P+ + +++ D + N+ I+ L
Sbjct: 455 AMKLVAKMKEKGCKPNVWIYNSLI-------------------DMHGKEKNLRQIEKL-- 493
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
W+ M ++ D++ YTS+I AYC E K L +E
Sbjct: 494 ---WNEMKRRKVAPDKITYTSIIGAYCKAQEFDKCIKLYNE 531
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 41 FSPSLVTCNALIHGL--GFFGRAE-------------EALEILRGMPEMGLFPDTVSFTA 85
FSP T N L+H + G G+ + +AL++L M E G+ P + FT
Sbjct: 298 FSPDFHTYNILLHAISKGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTT 357
Query: 86 VVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSL 145
++ GF R G+L + +++ M K G + D V YT +
Sbjct: 358 LIDGFSRAGKLD------------------------ACQYFFNEMKKNGCMPDVVAYTVM 393
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I Y E+ KA+ + +E+ V Y+ +I GL + EA M + C
Sbjct: 394 ITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGC 453
Query: 206 TSSWPTLTFDTLIENCSN 223
+ + ++ + TL+ N
Sbjct: 454 SPN--SVVYITLVSCLRN 469
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 41/198 (20%)
Query: 41 FSPSLVTCNALIHGL--GFFGRAE-------------EALEILRGMPEMGLFPDTVSFTA 85
FSP T N L+H + G G+ + +AL++L M E G+ P + FT
Sbjct: 298 FSPDFHTYNILLHAISKGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTT 357
Query: 86 VVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSL 145
++ GF R G+L + +++ M K G + D V YT +
Sbjct: 358 LIDGFSRAGKLD------------------------ACQYFFNEMKKNGCMPDVVAYTVM 393
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I Y E+ KA+ + +E+ V Y+ +I GL + EA M + C
Sbjct: 394 ITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGC 453
Query: 206 TSSWPTLTFDTLIENCSN 223
+ + ++ + TL+ N
Sbjct: 454 SPN--SVVYITLVSCLRN 469
>Medtr4g081220.1 | PPR containing plant-like protein | HC |
chr4:31456316-31468677 | 20130731
Length = 873
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 48 CNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD 107
C L+H E A +++ + E+G P T + A+++G+FR + A + M
Sbjct: 465 CRCLVHFCVRLKDFERAYKMVNELHELGFKPTTAMYNAIMAGYFREKNISGALRVLKHMQ 524
Query: 108 EMMQSNNMLAIQPLSG--------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
E + L G ++Y M K L + Y +L+NAY A GE +AK
Sbjct: 525 EANVKPDSQTFSYLIGNCETKDDINMYRDEMTKSEIKLTKQIYMALVNAYAACGEFEEAK 584
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
++D+ + + + I VL+S L R EA
Sbjct: 585 KVVDDQSTSKSLNE--IKSVLVSALASHGRLSEA 616
>Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5347631-5344253 | 20130731
Length = 791
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM--- 115
G+ A ++ + G+ P + ++ +++S F + G +A+ + EM E + ++
Sbjct: 599 GKLSLACKLFEIFTDAGVDPVSYTYNSIMSSFVKKGYFNEAWAILSEMGEKLCPTDIATY 658
Query: 116 -LAIQPLS----GDVYWSLMG---KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
+ IQ L D+ +++ KQGG LD V Y +LINA G + + +++
Sbjct: 659 NMIIQGLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKS 718
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIE 219
G V Y+ LI K R ++A K L ++ CT + T T D L+
Sbjct: 719 SGINPDVVTYNTLIEIHSKAGRLKDAYKFLKMMIDAGCTPNHVTDTTLDYLVR 771
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 27 QMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAV 86
+M H+G PD ++T N L+ G +EA + R M E G+ PD +++ +
Sbjct: 234 EMRHEGIQPD--------VITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYL 285
Query: 87 VSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLI 146
V F ++ +L K +L EM+ SG G L D +Y L+
Sbjct: 286 VHTFGKLNKLEKVSELLREME--------------SG----------GSLPDVSSYNVLL 321
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
AY G + ++ + ++ G V S Y +L++ K R + + + L +
Sbjct: 322 EAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEM 375
>Medtr5g042370.1 | PPR containing plant-like protein | HC |
chr5:18623271-18619747 | 20130731
Length = 767
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
++LIH L + A L M E GL D + + AV+S F ++ +L A +L +EM
Sbjct: 518 SSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIG 577
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
++P D + Y+ LINA+ G V+KA LD + +
Sbjct: 578 H-------TVKP-----------------DAIIYSVLINAFADVGNVIKATGYLDRMRNA 613
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKK 195
G V IY+ L+ K +EA++
Sbjct: 614 GFVGNQAIYNSLMKLYTKIGYLKEAQQ 640
>Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC |
chr1:15086400-15099057 | 20130731
Length = 1347
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
++LIH L + A L M E GL D + + AV+S F ++ +L A +L +EM
Sbjct: 1098 SSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIG 1157
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
++P D + Y+ LINA+ G V+KA LD + +
Sbjct: 1158 H-------TVKP-----------------DAIIYSVLINAFADVGNVIKATGYLDRMRNA 1193
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKK 195
G V IY+ L+ K +EA++
Sbjct: 1194 GFVGNQAIYNSLMKLYTKIGYLKEAQQ 1220
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC G+ + AF + ++ GF P+ VT N L+ G+ G+ +EAL
Sbjct: 173 LINCYCHLGQMNFAFSIFGNILKMGF--------QPNTVTLNTLVKGMCLNGKVKEALHF 224
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML----AIQPLSG 123
+ +G + V++ +++G ++G+ +A + ++D + + +++ I L
Sbjct: 225 HDHVIALGFPLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCK 284
Query: 124 DVY-------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV- 175
+++ +S M + V +SLI +C G++ KA L E+ ++ +V
Sbjct: 285 EIFVTEAYELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEML-LTNIHPNVY 343
Query: 176 IYDVLISGLDKKARTQEAKKML 197
+++L+ L K+ + A +L
Sbjct: 344 TFNILVDALCKEGNVKGAMNLL 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 53/272 (19%)
Query: 14 DKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPE 73
+ ++ A + Q+ G +PD +VT + LI+ G+ A I + +
Sbjct: 144 NNNHYTTAISLFHQLEFNGIIPD--------IVTLSILINCYCHLGQMNFAFSIFGNILK 195
Query: 74 MGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQ 133
MG P+TV+ +V G G++++A ++++A+
Sbjct: 196 MGFQPNTVTLNTLVKGMCLNGKVKEALHFH---------DHVIAL--------------- 231
Query: 134 GGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS--VIYDVLISGLDKKARTQ 191
G L++V Y +LIN C G+ +A +L ++ G + + V+Y +I L K+
Sbjct: 232 GFPLNQVTYGTLINGLCKMGKTTEALQVLRKID--GKLVNTDVVMYSTIIDSLCKEIFVT 289
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
EA ++ + +I + +L L+ GF I +A + +
Sbjct: 290 EAYEL-----------------YSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHE 332
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
ML N P+ +N L+ C+ N A ++
Sbjct: 333 MLLTNIHPNVYTFNILVDALCKEGNVKGAMNL 364
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N +I+G + +EA+ + M + PD V++ +++ G + G++ +Y LKL +DE
Sbjct: 14 NIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKI--SYALKL-VDE 70
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
M +G L D + Y S++NA C + +V KA LL +L
Sbjct: 71 ---------------------MNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQ 109
Query: 169 GDVRQSVIYDVLISG 183
G + +LI G
Sbjct: 110 GIRPNIYTHTILIDG 124
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 38/197 (19%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++ + NA++ G GR EEA ++ +P P+ VS+T ++ G+ ++ +
Sbjct: 121 NVASYNAMMSGFVKMGRVEEAKKVFEEIPR----PNVVSYTVMIDGYMKMEGGSGIKRAR 176
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSLMGK---QGGLLDE-------------VNYTSLIN 147
D M P +V W++M + GL +E V +T++I
Sbjct: 177 ALFDAM----------PSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMIT 226
Query: 148 AYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS 207
+C G++ +A L ++ + ++++I+G + R +EA + +V T
Sbjct: 227 GFCKQGKIDEAWNLFQQIR----CKDRACWNIMITGFAQNGRGEEALNLFSQMVR---TG 279
Query: 208 SWP-TLTFDTLIENCSN 223
P LTF +L C++
Sbjct: 280 MQPDDLTFVSLFTACAS 296
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 25/248 (10%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
+V+ N+++ GL G + AL++ MPE D VS+ ++ GF + GE+ KA+ L
Sbjct: 190 VVSWNSMVGGLVKNGDLDGALKVFDEMPER----DRVSWNTMLDGFTKAGEMDKAFKLFE 245
Query: 105 EMDE--MMQSNNMLAIQPLSGDVYWS-LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
M E ++ + M+ +GD+ + ++ + + + V +T++I+ Y G+V +A L
Sbjct: 246 RMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNL 305
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIEN 220
DE+ G + +++ + KKM S + S L +F +
Sbjct: 306 CDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAK 365
Query: 221 C--------------SNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNF 266
C + + S ++ GF I ++ + NTM+ KPD +
Sbjct: 366 CGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIG 425
Query: 267 LIVEHCRC 274
L+ C C
Sbjct: 426 LL---CAC 430
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ Y D +F +A + +M E L TCN +I G +E
Sbjct: 303 SYSTLLAIYVDNQKFVEAVSLFSEMNE--------VECPIDLTTCNIMIDVYGQLQMIKE 354
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--KLEMDEMMQS----NNMLA 117
A GM +MG+ P+ VS+ V+ + G +A L ++M + Q+ N M++
Sbjct: 355 ADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMIS 414
Query: 118 I--QPLSGDVYWSL---MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
I + L D +L M +G + + Y+++I+ + G++ +A L +L G
Sbjct: 415 IYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKI 474
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
++Y +I K AK++L
Sbjct: 475 DEILYQTMIVAYQKAGLVAHAKRLL 499
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
+ PD V++ +++ GF + G++ A L EM + Q N+
Sbjct: 6 IIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNI-------------------- 45
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
+ Y S+++A C + KA TLL +L G Y +LI GL K R ++A+K
Sbjct: 46 ----ITYNSILDALCKRHHLDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARK 101
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHW 255
+ F+ ++ N + + ++ GF L +EA ++L+ M
Sbjct: 102 V-----------------FEVILVKGYNLDVYAYAVMIHGFCNNGLFDEALAMLSKMTTD 144
Query: 256 NDKPDGAVYNFLIV 269
N+ A N +I+
Sbjct: 145 NNCNPNAATNEIII 158
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY +L+ +C G+ S A + D+M +G P+++T N+++ L ++
Sbjct: 12 AYNSLIDGFCKSGKISYALKLVDEMHDRG--------QPPNIITYNSILDALCKRHHLDK 63
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ +L + + G+ P+ ++T ++ G + G L A +
Sbjct: 64 AITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKV--------------------- 102
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR-QSVIYDVLIS 182
+ ++ +G LD Y +I+ +C +G +A +L ++T + + +++I
Sbjct: 103 ---FEVILVKGYNLDVYAYAVMIHGFCNNGLFDEALAMLSKMTTDNNCNPNAATNEIIIC 159
Query: 183 GLDKKARTQEAKKMLLSLV 201
L K +AK++L ++
Sbjct: 160 SLFDKNEIDKAKRLLHEMI 178
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 15 KGE--FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
KGE F +D+MI G +PD +T N+L+ G E A ++L M
Sbjct: 295 KGEVSFDVVVKFYDEMIANGLMPD--------RLTYNSLLSVCASKGMWEMAQKLLSEMD 346
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY------ 126
+ PD ++ + + G++ A + EM N++ + D Y
Sbjct: 347 HRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMM-DGYAKANLL 405
Query: 127 ------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
+ M + LD V+Y +L+ Y G + +A E+ G R V Y+ L
Sbjct: 406 EDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNAL 465
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNE-FTSLVELVKGFRI 238
+SG K E +++ + + +P TLT+ T+I+ + E F +++ + F++
Sbjct: 466 LSGYGKHGMYDEVRRLFEEMK---ARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKM 522
Query: 239 RDLE 242
LE
Sbjct: 523 ARLE 526
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHK---GFLPDFVTEFSP---SLVTCNALIHGLGF 57
Y ++ C + + AF + ++M+ K LPD VT +SP + T ++ L
Sbjct: 66 TYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVT-YSPLINDVYTFGIMVEALCK 124
Query: 58 FGRAEEA-LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML 116
G EEA + I M ++G+ PD F + + G F SN
Sbjct: 125 EGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCF-------------------PSN--- 162
Query: 117 AIQP-LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
QP ++ D++ S M ++G + + NYT +I C V +A L +E+ +
Sbjct: 163 --QPDMAKDIFDS-MDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAK 219
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
IY +I GL K R A L LV + PT F
Sbjct: 220 IYTSIIDGLFKSGRDTCA----LKLVGEMHDKGLPTNVF 254
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS----PSLVTCNALIHGLGFF 58
+AY+ +G D S M+ + G L D + F P++V ++I G
Sbjct: 406 HAYIQKIGLRIDAYVGSSLIDMYSK---SGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
G+ +EA+ + GM +G+ P+ V+F V++ +G + +
Sbjct: 463 GQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEE-------------------- 502
Query: 119 QPLSGDVYWSLMGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDE--LTHFGDVRQSV 175
G Y+ +M + EV +YTS++N Y G +++AK + E ++HF V +S
Sbjct: 503 ----GCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSF 558
Query: 176 I 176
+
Sbjct: 559 L 559
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 45/240 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+Y L+ Y GE + + D M + F +T NA I G A
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDF------------ITWNAAISAYAQNGMA 301
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+ + M E G+ P+ V+ TAV+S IG A DL +MDE + L
Sbjct: 302 DEAISLFHSMKENGVDPNKVTLTAVLSACASIG----ALDLGKQMDEYATH------RGL 351
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D++ + T+LI+ Y G + A+ + +++ D ++ +I
Sbjct: 352 QHDIFVA--------------TALIDMYAKCGSLESAQRVFNDMPRKNDAS----WNAMI 393
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
S L + +EA + + ++ +TF +L+ C + LV+ +G+R+ D+
Sbjct: 394 SALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVH---AGLVD--EGYRLFDM 448
>Medtr4g079260.1 | PPR containing plant-like protein | LC |
chr4:30600131-30604187 | 20130731
Length = 476
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 86/224 (38%), Gaps = 26/224 (11%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
+VT LI+G + E+A ++ M + G+ DT + +++ F+ K D+
Sbjct: 263 VVTYLNLINGYSVRNQVEKAQDLFDNMFKRGVPYDTRCYNMMINNFYENKLFAKVIDI-- 320
Query: 105 EMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
++LM +G + V+ LIN++C G + A ++
Sbjct: 321 ----------------------FNLMCSKGFYPEVVSCNYLINSFCKSGYLSSAWSMFHH 358
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+ + G V Y+ L L + + E K+L ++ H + T + C
Sbjct: 359 MQNRGLQPDIVTYNYLCCALLQMNKVDEVMKLLPTMEEHKINAD--NFTNSIIFYKCVTF 416
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
F ++ GF +R L N+A + M PD Y I
Sbjct: 417 NFVVYNSMINGFCLRKLINDALKLFPKMKENGCNPDAVTYKTTI 460
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 51 LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM 110
+I+G R EA+ + M + PD V++++++ GF + ++ A +L EM +
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHD-- 58
Query: 111 QSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+G D + Y S+++A C + +V KA LL + + G
Sbjct: 59 ----------------------RGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGI 96
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV---YHLCTSSW 209
Y +LI GL K R ++A+ + L+ Y++ +++
Sbjct: 97 QPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVNTY 138
>Medtr2g007050.1 | PPR containing plant-like protein | HC |
chr2:806839-804631 | 20130731
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
L+T N ++ LG GR +E L++ + E G PDT+S+ +++G ++G ++
Sbjct: 218 LITYNIVLDILGRKGRVDEMLDMFASLKETGFVPDTISYNTLINGLRKVGRSDMCFE--- 274
Query: 105 EMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
Y+ M + G D + YT+LI+ G + ++ E
Sbjct: 275 ---------------------YFKEMKENGNEPDLLTYTALIDISGRAGNIEESLKFFME 313
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ G + IY LI L+K + A ++L
Sbjct: 314 MKLKGILPSIQIYRSLIHNLNKTENIELATELL 346
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC +A + + M LPD + T N ++ GL G+ +E
Sbjct: 12 TYNILVHGYCKLKWLKEAVEVTELMTGNDMLPD--------VWTYNTMVRGLCDEGKIDE 63
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNMLA 117
A+ + M + L PD V++ ++ G F A+ L EM + + N M+
Sbjct: 64 AVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVK 123
Query: 118 IQPLSGDV-----YWSLMGKQGGLLDE--VNYTSLINAYCADGEVVKAKTLLDELTHFG 169
G+V + M + G LL ++Y +IN YC G++ KA ++DE+ G
Sbjct: 124 WFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRKG 182
>Medtr3g052970.1 | PPR containing plant-like protein | HC |
chr3:20990849-20990172 | 20130731
Length = 225
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-- 106
N L++G +L L M G+ P S V+S +G+L+KA +L EM
Sbjct: 14 NYLVYGFLQCKDLSSSLHHLTTMISKGIKPSDRSLRKVISSLCDVGKLQKAVELSREMGY 73
Query: 107 -----DEMMQSNNMLAIQPL----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
D ++Q+ M ++ L + + + M ++ D ++Y LI +C G + K
Sbjct: 74 RGWKHDSLIQTRIMESLLSLGFVENAECFLDRMKEESLTPDNIDYNYLIKRFCEFGRLKK 133
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGL 184
A L++ + ++ S YD LI G
Sbjct: 134 AVHLMNIMLKKSNIPISTSYDFLIHGF 160
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 46 VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE 105
+T +++HGL G+ EEAL + M + G+ P +T+++ FF+ + KA + E
Sbjct: 870 LTYGSIVHGLLQKGKLEEALTKVSRMKQEGITPTIHVYTSLIVHFFKQKHVEKAIQIYAE 929
Query: 106 MDEMMQSNNMLAIQPL------------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADG 153
M E N++ L + +V++ + K G D Y+ ++ C G
Sbjct: 930 MLESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFK-GPFPDFKTYSMFLSCLCKAG 988
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+A L+ E+ G V ++ + + GL+++ + A+ +L
Sbjct: 989 RSEEAMRLISEMLESGIVPSTINFRTVFYGLNREGKQGLARVVL 1032
>Medtr8g098445.1 | PPR containing plant-like protein | HC |
chr8:41071236-41073243 | 20130731
Length = 430
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 32/164 (19%)
Query: 6 VNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEAL 65
V ++ C G +A + M KG +P+ +V A++ G +A++A+
Sbjct: 263 VAMLDGLCKDGNVQEALKLFGLMREKGTIPE--------IVIYTAVVEGYTKAHKADDAI 314
Query: 66 EILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV 125
I R M G+ P+ S+T ++ G ++ L+ A + +EM E S N+
Sbjct: 315 RIFRKMQSNGILPNAFSYTVLIQGLYKCSRLQDAVEFCVEMLEAGHSLNV---------- 364
Query: 126 YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ L++ +C + + +AK ++ LT G
Sbjct: 365 --------------TTFVGLVDGFCKENGIEEAKGVIKTLTGKG 394
>Medtr3g091460.1 | PPR containing plant-like protein | HC |
chr3:41616039-41619290 | 20130731
Length = 631
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 46/278 (16%)
Query: 31 KGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
K F+ D F+PS T LI GL R + A++I M G PD + + ++ G
Sbjct: 194 KQFIKD--APFNPSPTTFRILIKGLVDNNRLDRAMDIKDQMNASGFAPDPLVYHYLMLGH 251
Query: 91 FRI----GELRKAYDLKLEMDEMMQSNNML----------AIQPLSGDVYWSLMGKQGGL 136
R G LR +LK ++ +++ +L ++ + + Y + +G
Sbjct: 252 ARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKGYFLKGMEKEAMECYQEVF-VEGKK 310
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELT--HFGDVRQSV---IYDVLISGLDKKARTQ 191
+ ++ Y S+++A +G+ +A L D + H + +V ++V++ G + + +
Sbjct: 311 MSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFK 370
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG---------------- 235
EA ++ S+ C TL+F+ LIE NN E V G
Sbjct: 371 EAIEVFRSMGESRCKPD--TLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGL 428
Query: 236 -----FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
F+ + ++AAS M+ +P+ AVYN L+
Sbjct: 429 LMDTCFK-ENRPDDAASYFKKMVESGLRPNLAVYNRLV 465
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 27/191 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY +++ G+F +A + D+MI + P + + +L + N ++ G G+ +E
Sbjct: 315 AYNSVLDALAKNGKFDEAMRLFDRMIKEHNPP---AKLAVNLGSFNVMVDGYCAEGKFKE 371
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E+ R M E PDT+SF ++ G + LE +E
Sbjct: 372 AIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMI-------LEAEE--------------- 409
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
VY + GK G DE Y L++ + A + ++ G +Y+ L+ G
Sbjct: 410 -VYGEMEGK-GVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDG 467
Query: 184 LDKKARTQEAK 194
L K + +AK
Sbjct: 468 LVKVGKIDDAK 478
>Medtr4g060570.1 | PPR containing plant-like protein | HC |
chr4:22286659-22289229 | 20130731
Length = 418
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
Query: 38 VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
V + P+ +T + LIHGL GR E A E+ M G P + S+ ++V+ +G++
Sbjct: 277 VYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVE 336
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
+A + EM E +S +D + Y ++++ C G V +
Sbjct: 337 EAVNYLWEMTEKQKS------------------------VDFITYRTVLDEICRRGRVQE 372
Query: 158 AKTLLDEL 165
A L EL
Sbjct: 373 AMRFLQEL 380
>Medtr1g113010.1 | PPR containing plant-like protein | HC |
chr1:51277135-51279295 | 20130731
Length = 630
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 27/201 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY +++ G+F +A + ++MI + P + + +L + N ++ G G+ +E
Sbjct: 313 AYNSVLDALAKNGKFDEAMKLFNRMIKEHNPP---AKLAVNLGSFNVMVDGYCAEGKFKE 369
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+EI R M E PDT+SF ++ G + LE +E
Sbjct: 370 AIEIFRSMGESRCKPDTLSFNNLIEQLCNNGMI-------LEAEE--------------- 407
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
VY + GK G DE Y L++ + A + ++ G +Y+ L+ G
Sbjct: 408 -VYGEMEGK-GVNHDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDG 465
Query: 184 LDKKARTQEAKKMLLSLVYHL 204
L K +T +AK +V L
Sbjct: 466 LVKVGKTDDAKSFFDLMVKKL 486
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 49/296 (16%)
Query: 31 KGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
K F+ D +P L T LI GL R + AL+I M +G PD + + ++ G
Sbjct: 192 KQFIKD--APVNPLLTTFRILIKGLVDNNRLDRALDIKNQMHALGFAPDPLVYHYLMLGH 249
Query: 91 FR----IGELRKAYDLKLEMDEMMQSNNMLA----------IQPLSGDVYWSLMGKQGGL 136
R G LR +LK ++ +++ +L ++ + + Y + +G
Sbjct: 250 ARSSDGYGVLRVYQELKEKLGGVVEDGVVLGCLMKGYFLKGMEKEAMECYQEVF-VEGKK 308
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELT--HFGDVRQSV---IYDVLISGLDKKARTQ 191
+ ++ Y S+++A +G+ +A L + + H + +V ++V++ G + + +
Sbjct: 309 MSDIAYNSVLDALAKNGKFDEAMKLFNRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFK 368
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG---------------- 235
EA ++ S+ C TL+F+ LIE NN E V G
Sbjct: 369 EAIEIFRSMGESRCKPD--TLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNHDEYTYGL 426
Query: 236 -----FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI---VEHCRCDNGDKAYDM 283
F+ + ++AAS M+ +P+ AVYN L+ V+ + D+ +D+
Sbjct: 427 LMDTCFK-ENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKTDDAKSFFDL 481
>Medtr4g104800.1 | PPR containing plant protein | LC |
chr4:43426065-43428441 | 20130731
Length = 637
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 39 TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRK 98
T ++ S + + L G+ +EA +I+ M G PD ++++ ++ GF + ++
Sbjct: 369 TGYTLSKAVYDGIHRSLTGAGKFDEAEKIVETMKNAGYEPDNITYSQLIFGFCKTRRFKE 428
Query: 99 AYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKA 158
A L++ + MQ+ N+ W +D +T LI YC GE+ A
Sbjct: 429 A----LKVIDHMQAINL-----------W---------VDIKTWTILIQGYCDAGELDGA 464
Query: 159 KTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
L ++ + + +VL+ G K+ R +A K+LL + S W TF+ LI
Sbjct: 465 LLGLYKMMEKSSSPDAELLEVLVDGFIKQKRIDDAYKLLLEISGKCHLSPWQA-TFEKLI 523
Query: 219 EN 220
++
Sbjct: 524 DS 525
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 39/231 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ Y G+ A + D+M+ + + P++ T AL++ G E+
Sbjct: 244 SYTMLINLYGKAGKSYMALKVFDEMLSQ--------KCKPNICTYTALVNAFAREGLCEK 295
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A EI M E GL PD ++ A++ + R G P
Sbjct: 296 AEEIFEQMQEAGLEPDVYAYNALMEAYSRAG------------------------FPYGA 331
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+SLM G D +Y L++AY G A+ + + + G + VL+S
Sbjct: 332 AEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMVLLSA 391
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
K + + +L +C S L DT + N N + L + K
Sbjct: 392 YSKMGNVTKCEDIL----NQMCKSG---LKLDTFVLNSMLNLYGRLGQFGK 435
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 51 LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM 110
+I+GL +EA+ + + + + PD V++++++ G + G++ +DL +D+M
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDL---IDDMH 57
Query: 111 QSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G+Q D + YTSL++A + +V KA LL ++ G
Sbjct: 58 DR------------------GQQA---DIIIYTSLLDALFKNHQVDKAIALLKKIKDRGI 96
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIENCSNNEFT 227
Y +L+ GL K R ++A+++ L+ YH F+ + N
Sbjct: 97 EPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYH----------FNACMHNV------ 140
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
++ G L +EA VL+ M PD Y LI + D DKA
Sbjct: 141 ----MINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALFKNDMNDKA 189
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 112/287 (39%), Gaps = 43/287 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y ++G Y G F +A +M G D +VT NAL+ G G +G +E
Sbjct: 391 SYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRD--------VVTYNALLSGYGRYGMYDE 442
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+ M ++P+T++++ ++ + + G ++A D+ + +
Sbjct: 443 VRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLE----------- 491
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+D V YTS+I++ C +G V + LL + G V ++ +I
Sbjct: 492 -------------VDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNE-----FTSLVELVKGFRI 238
+++ T E S T ++ D +N + ++ F L G R
Sbjct: 539 -SRQSPTLEYGVHGSSQAVEYPTEQLSSMLIDGAFQNKTGDDRILKMFEQLAAEKAGHRE 597
Query: 239 RDLENEAAS-----VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+D + + M N KP+ ++ ++ RC++ + A
Sbjct: 598 KDRKGRQDQHCILWLFQKMHELNIKPNVVTFSAILNACSRCNSFEDA 644
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 40/276 (14%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++ + +A+I G G +A+++ R M G++P+ +S+ +++ + GE+ +D+
Sbjct: 212 TVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAK-GEV--DFDVV 268
Query: 104 LEM-DEMMQS---------NNMLAIQPLSGDVYW-------SLMGKQGGLLDEVNYTSLI 146
++ DEM+ N++L++ G W S M ++G + D Y + +
Sbjct: 269 VKFFDEMLAEGIVPDRLTYNSLLSVCASKG--MWETAQKLLSEMDQKGIVRDAFTYNTYL 326
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA----KKMLLSLV- 201
+ C G++ A+ +L+E++ V Y +I G K ++A ++M L +
Sbjct: 327 DTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSIS 386
Query: 202 -----YHLCTSSWPTL-TFDTLIENCSNNEFTSLVE-------LVKGFRIRDLENEAASV 248
Y+ + L FD I C E + L+ G+ + +E +
Sbjct: 387 VDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRL 446
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M WN P+ Y+ +I + + +A D+Y
Sbjct: 447 FEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVY 482
>Medtr3g053000.1 | PPR containing plant-like protein | HC |
chr3:21005019-21000734 | 20130731
Length = 1200
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 110/280 (39%), Gaps = 54/280 (19%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
++ CD GE KA + M +G++ D + + ++ L G E A
Sbjct: 954 KVISSLCDVGELQKAMELSRGMGFRGWIHDSLIQ--------TRIVESLLSRGFMENAEC 1005
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
L M E L PD + + ++ F G L+KA L M+ M++ +N+ P+S
Sbjct: 1006 FLDRMEEESLTPDNIDYNYLIKRFCEFGRLKKAVHL---MNIMLKKSNI----PIS---- 1054
Query: 127 WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDK 186
+Y LI +CA E+ A E+ + + ++L+ +
Sbjct: 1055 -------------TSYDFLIYGFCAQNELDTASNFYYEMLNLNFKPRIDTVEMLMFSFCE 1101
Query: 187 KARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAA 246
RT++A++ L+ ++ C PT + + +K + + +A+
Sbjct: 1102 HGRTEQAEQFLVDMI---CGGEKPTRKMYSTV--------------IKSYHMEKNLKKAS 1144
Query: 247 SVLNTMLHWNDKPDGAVYNFLI-----VEHCRCDNGDKAY 281
++ M +PD ++ LI + DNG+K +
Sbjct: 1145 YLVQAMQEKGYQPDFDIHWSLISNLSNAKEKDTDNGNKGF 1184