Miyakogusa Predicted Gene

Lj0g3v0227189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0227189.1 Non Characterized Hit- tr|K4CXG6|K4CXG6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=CIP,41.45,4e-16,seg,NULL,CUFF.14801.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein...   142   2e-34
Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein...   132   3e-31

>Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717288 | 20130731
          Length = 924

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/156 (57%), Positives = 103/156 (66%), Gaps = 8/156 (5%)

Query: 1   MIEALQLWKKIAGKGDGSPND-------GGNPESAVSSETSDLKKEIFEERKSDPQVKEP 53
           M EAL LWKKIAGK DGS +D       GGNPE AV +ETSDLK    +ERK+DP VK+ 
Sbjct: 309 MTEALDLWKKIAGK-DGSSHDSKPLSSDGGNPEPAVLTETSDLKNVNPDERKTDPSVKDL 367

Query: 54  STSSSNTDLTTKAKSAGISEKAVVILKKEAPVLSDKELNPEFFQKHEKRGSDDLPVEVVV 113
            TSSSNTD  +KAK+A ISEKAVVILKK+ PVL+DK LNPEFFQ  E+R  DDLPVEVVV
Sbjct: 368 PTSSSNTDSNSKAKAASISEKAVVILKKKPPVLNDKVLNPEFFQNLERRDLDDLPVEVVV 427

Query: 114 PRRCLXXXXXXXXXXXXXXXXXXXXGRTSIGNIPND 149
           PR+CL                       + GN+PND
Sbjct: 428 PRKCLNSSSSNNDEESKATAKDSNERTNATGNVPND 463



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 22/82 (26%)

Query: 155 LMQVERLHVDMMNRLQTFMDQSRDSMVSLENSVWGLERTVE------------------- 195
           L Q+ER    +MN LQ FM  S DSMV+LEN V GLER VE                   
Sbjct: 557 LTQLERQQGHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRRFEGSSG 616

Query: 196 ---AKYNGFKDYSNAKYGRDGD 214
              +KYNGF +YSN+KYGR GD
Sbjct: 617 RPSSKYNGFNEYSNSKYGRGGD 638


>Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717265 | 20130731
          Length = 913

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 98/149 (65%), Gaps = 5/149 (3%)

Query: 1   MIEALQLWKKIAGKGDGSPNDGGNPESAVSSETSDLKKEIFEERKSDPQVKEPSTSSSNT 60
           M EAL LWKKIAGK DGS +D       +SSETSDLK    +ERK+DP VK+  TSSSNT
Sbjct: 309 MTEALDLWKKIAGK-DGSSHD----SKPLSSETSDLKNVNPDERKTDPSVKDLPTSSSNT 363

Query: 61  DLTTKAKSAGISEKAVVILKKEAPVLSDKELNPEFFQKHEKRGSDDLPVEVVVPRRCLXX 120
           D  +KAK+A ISEKAVVILKK+ PVL+DK LNPEFFQ  E+R  DDLPVEVVVPR+CL  
Sbjct: 364 DSNSKAKAASISEKAVVILKKKPPVLNDKVLNPEFFQNLERRDLDDLPVEVVVPRKCLNS 423

Query: 121 XXXXXXXXXXXXXXXXXXGRTSIGNIPND 149
                                + GN+PND
Sbjct: 424 SSSNNDEESKATAKDSNERTNATGNVPND 452



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 22/82 (26%)

Query: 155 LMQVERLHVDMMNRLQTFMDQSRDSMVSLENSVWGLERTVE------------------- 195
           L Q+ER    +MN LQ FM  S DSMV+LEN V GLER VE                   
Sbjct: 546 LTQLERQQGHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRRFEGSSG 605

Query: 196 ---AKYNGFKDYSNAKYGRDGD 214
              +KYNGF +YSN+KYGR GD
Sbjct: 606 RPSSKYNGFNEYSNSKYGRGGD 627