Miyakogusa Predicted Gene

Lj0g3v0226969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0226969.1 tr|A2Q5T0|A2Q5T0_MEDTR KDPG and KHG aldolase
OS=Medicago truncatula GN=MTR_7g009670 PE=4
SV=1,60,0.000000000001,seg,NULL,CUFF.14785.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g009670.1 | KDPG and KHG aldolase | HC | chr7:2179930-2184...    56   1e-08

>Medtr7g009670.1 | KDPG and KHG aldolase | HC |
          chr7:2179930-2184907 | 20130731
          Length = 259

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 6/70 (8%)

Query: 1  MGTATATLTL--CQWPSSSSLGLR---ARVX-XXXXXXXXXXXXXXVDKTLCQIKNSGII 54
          M +A+ TLTL  CQW SSS+  +R   +RV                VDKTLCQI NSG+I
Sbjct: 1  MASASTTLTLNQCQWLSSSTSSMRLPSSRVTCKASESHPQLSVSTTVDKTLCQINNSGVI 60

Query: 55 ACLRANRSHV 64
          ACLRAN + V
Sbjct: 61 ACLRANSAEV 70