Miyakogusa Predicted Gene

Lj0g3v0226459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0226459.1 tr|D7LZN3|D7LZN3_ARALL Signal-responsive protein
OS=Arabidopsis lyrata subsp. lyrata GN=ATSR PE=4
SV,72.88,1e-18,THREONINE DEHYDRATASE-RELATED,NULL; SER/THR
DEHYDRATASE, TRP SYNTHASE,NULL; no description,NULL,CUFF.14812.1
         (62 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098460.1 | serine/threonine dehydratase serine racemase |...   113   5e-26
Medtr7g103510.1 | serine/threonine dehydratase serine racemase |...   102   9e-23

>Medtr8g098460.1 | serine/threonine dehydratase serine racemase | HC
           | chr8:40869845-40867057 | 20130731
          Length = 333

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 51/60 (85%), Positives = 58/60 (96%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           M+LC++ILK+VVEPSGAIGLAAVLS+SFQKNPAWKDC +IGIVVSGGNVD+ VLWDSLNK
Sbjct: 274 MQLCYEILKIVVEPSGAIGLAAVLSESFQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLNK 333


>Medtr7g103510.1 | serine/threonine dehydratase serine racemase | HC
           | chr7:41875026-41876797 | 20130731
          Length = 329

 Score =  102 bits (253), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 55/61 (90%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           MKLCF+ILK+VVEPSGAIGLAAVLS +FQKN AWKD  +IGIV+SGGNVD+ VLW+ LNK
Sbjct: 268 MKLCFEILKIVVEPSGAIGLAAVLSKTFQKNDAWKDSKHIGIVISGGNVDMAVLWNYLNK 327

Query: 61  A 61
           +
Sbjct: 328 S 328