Miyakogusa Predicted Gene

Lj0g3v0225939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225939.1 Non Characterized Hit- tr|I3SCE4|I3SCE4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,29.7,0.00000006,
,CUFF.14704.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g089160.1 | hypothetical protein | LC | chr2:37647094-3764...    55   1e-08
Medtr5g025040.1 | hypothetical protein | LC | chr5:10136553-1013...    54   3e-08
Medtr5g054985.1 | hypothetical protein | HC | chr5:22639135-2263...    52   1e-07
Medtr4g097730.1 | hypothetical protein | LC | chr4:40346630-4034...    52   1e-07
Medtr3g068165.1 | transmembrane protein, putative | HC | chr3:30...    51   2e-07
Medtr1g046260.1 | hypothetical protein | LC | chr1:17429825-1742...    50   5e-07
Medtr2g040320.1 | hypothetical protein | HC | chr2:17689907-1768...    50   6e-07
Medtr1g055370.1 | transmembrane protein, putative | HC | chr1:24...    49   1e-06
Medtr4g081960.1 | hypothetical protein | LC | chr4:31827895-3182...    49   2e-06
Medtr3g052690.1 | hypothetical protein | HC | chr3:20848686-2084...    48   2e-06
Medtr6g016340.1 | hypothetical protein | LC | chr6:6020349-60176...    47   3e-06
Medtr2g062550.1 | hypothetical protein | LC | chr2:26403810-2640...    47   3e-06

>Medtr2g089160.1 | hypothetical protein | LC |
           chr2:37647094-37647933 | 20130731
          Length = 221

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGL--FPFVKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +G  +V      DH +QF     F   K++ L  IW+S +W IW+ RNA +F +   + +
Sbjct: 122 LGYQLVLPENVLDHLYQFGTFSGFSNSKRSTLNLIWLSCVWVIWLERNARIFHQKEASFN 181

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
            + +  +++S+ WL+A   +F+     W  +P+ CL
Sbjct: 182 QLLDKVKLQSYWWLKANRPSFVFSYHSWWLDPLPCL 217


>Medtr5g025040.1 | hypothetical protein | LC |
           chr5:10136553-10137091 | 20130731
          Length = 159

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGL--FPFVKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +G+  V +   +DHFHQF  L  FP      L  IW+S    IW  RN  +F        
Sbjct: 60  LGLSSVDTYCAQDHFHQFARLGGFPRQSHPILKLIWLSCALTIWKERNNQIFNNNVLPLH 119

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
            + +  ++ S+ WLR K  NF +   EW   P+ C+
Sbjct: 120 QLLDQVKLLSFNWLRRKTINFAYTYHEWWRHPLFCM 155


>Medtr5g054985.1 | hypothetical protein | HC |
           chr5:22639135-22639527 | 20130731
          Length = 130

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGL--FPFVKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +G  +VF     DH +QF     F   K++ L  IW+S +W IW+ RNA +F +   + +
Sbjct: 31  LGYQLVFPENVLDHLYQFATFSGFSNSKRSSLNLIWLSCVWVIWLERNARIFHQKEASFN 90

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
            + +  +++S+ WL+    +F+     W    + CL
Sbjct: 91  QLLDKVKLQSYWWLKVNRPSFVFSYHSWWLNHLPCL 126


>Medtr4g097730.1 | hypothetical protein | LC |
           chr4:40346630-40345925 | 20130731
          Length = 213

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 4   YVVFSAEPKDHFHQFCGLFPFVKKN--GLMSIWISVIWHIWMGRNAAVFREGSFTPDDVF 61
           ++VF     DH +QF  L  F K N      IW+S +W IW+ RN  VF +   +   + 
Sbjct: 117 HIVFPKHVSDHLYQFGTLGGFSKSNRSAFNLIWLSCVWVIWIERNTRVFHQKEASFIQLL 176

Query: 62  ELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
           +  +++S+ WL+A C  F      W    + CL
Sbjct: 177 DKIKLQSYWWLKANCHTFAFSYHLWWLNHLPCL 209


>Medtr3g068165.1 | transmembrane protein, putative | HC |
           chr3:30793396-30793716 | 20130731
          Length = 106

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 8   SAEPKDHFHQFCGLF-PFVK-----------KNGLMSIWISVIWHIWMGRNAAVFREGSF 55
            AE   H   +CG++ P  +           ++ L  +W+  +W IW  RN  +F+    
Sbjct: 5   QAETASHLFLYCGMYAPLWQMVRCLRGLKACRSFLQLLWLLCVWLIWQKRNNKLFKNSQL 64

Query: 56  TPDDVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
           T  ++ +  +  S+ WL+A  ++F+ G+  W +EP+ CL
Sbjct: 65  TISELIDKVKFYSYWWLKANNTSFVFGSQRWWSEPLRCL 103


>Medtr1g046260.1 | hypothetical protein | LC |
           chr1:17429825-17425747 | 20130731
          Length = 197

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGLFPFVKKNG--LMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +G+  +  A   DHF  F  L    +     L  IW + +W IW  RN  +F++ S T D
Sbjct: 98  VGISFIAPATVGDHFQHFGQLAGLSRSANSFLTVIWHACVWVIWKERNNKIFQQKSLTSD 157

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEP 90
            + E  ++ S+ WL+A   +F     +W   P
Sbjct: 158 RLSERVKIMSFNWLKANMPSFAFSYNDWGQHP 189


>Medtr2g040320.1 | hypothetical protein | HC |
           chr2:17689907-17689458 | 20130731
          Length = 113

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGL--FPFVKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +GV    S +  DHF QF         +++ L  IW+  +W +W  RN  +F     + +
Sbjct: 10  IGVSEADSHDLSDHFIQFITSTGHTRARRSFLQLIWLLCVWMVWNERNNRLFNNTQTSIE 69

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
            + E  ++ S  WL+A  + F++G+  W ++P+ CL
Sbjct: 70  GLSEKVKLHSLWWLKASKATFVYGSQRWWSDPMLCL 105


>Medtr1g055370.1 | transmembrane protein, putative | HC |
           chr1:24510841-24509462 | 20130731
          Length = 139

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 13  DHFHQFCGL--FPFVKKNGLMSIWISVIWHIWMGRNAAVFREGSFTPDDVFELSRMKSWE 70
           DH+ QF  L   P      L  IW++ +W IW  RN  +F+     P ++ E  +M S+ 
Sbjct: 53  DHYFQFTHLVGMPRASYFYLKVIWLACVWTIWKERNNCLFKNTVIDPYNIVEKVKMDSFL 112

Query: 71  WLRAKCSNFLHGTFEWHNEPICCL 94
           WL +       G  +W   P+ C+
Sbjct: 113 WLSSNSVTLAFGFHDWWRHPLLCI 136


>Medtr4g081960.1 | hypothetical protein | LC |
           chr4:31827895-31829473 | 20130731
          Length = 238

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 1   MGVYVVFSAEPKDHFHQFCGLFPFVK--KNGLMSIWISVIWHIWMGRNAAVFREGSFTPD 58
           +GV VV+      H + F GL    K  + GL +I  + +W IW  RNA   ++   + D
Sbjct: 45  LGVSVVYHNISSVHLNSFVGLMRGNKGIELGLRTISFTCLWSIWKARNAKKIQDKKVSTD 104

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCLTDM 97
            + +  R+ SW WL  K + F +   +W + P+  L  M
Sbjct: 105 KIVDQVRLLSWNWL-TKSTIFKYELDQWWSCPLALLGVM 142


>Medtr3g052690.1 | hypothetical protein | HC |
           chr3:20848686-20848117 | 20130731
          Length = 149

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGLFPFVK-KNGLMS-IWISVIWHIWMGRNAAVFREGSFTPD 58
           +GVY        DHFHQF     + K +  LM  IW + +W IW  RN  +FR    +  
Sbjct: 51  LGVYSADPGNIVDHFHQFGTSSGYGKLRCSLMHLIWFATVWEIWKERNDRIFRGQERSHY 110

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICC 93
            + E  ++ S+ W +AK + F +   +W   P  C
Sbjct: 111 QMLEAIKLLSFWWFKAKFTVFPYCFHDWCQAPFLC 145


>Medtr6g016340.1 | hypothetical protein | LC | chr6:6020349-6017672
           | 20130731
          Length = 179

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 1   MGVYVVFSAEPKDHFHQFCGLFPFVK-KNGLMS-IWISVIWHIWMGRNAAVFREGSFTPD 58
           +GVY        DHF+QF     + K +  LM  IW + +W IW  RN  +FR+   +  
Sbjct: 81  LGVYSADPGNIVDHFYQFGTSSGYGKLRCSLMHLIWFATVWEIWKERNDRIFRDQERSHY 140

Query: 59  DVFELSRMKSWEWLRAKCSNFLHGTFEWHNEPICCL 94
            + E  ++ S+ W +AK + F +   +W   P  C+
Sbjct: 141 QMLEAIKLLSFWWFKAKFTVFPYCFHDWCQAPFLCV 176


>Medtr2g062550.1 | hypothetical protein | LC |
           chr2:26403810-26406302 | 20130731
          Length = 247

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 12  KDHFHQFCGLFPFVKKNGLM--SIWISVIWHIWMGRNAAVFREGSFTPDDVFELSRMKSW 69
            DHF QF  L   ++ + L    IW++  W IW  R+  V R  +  P+ + E  ++ S+
Sbjct: 89  NDHFLQFINLEGVLQSSYLYLKVIWLASTWAIWKERDNRVLRNTAVDPNTILEKVKLNSF 148

Query: 70  EWLRAKCSNFLHGTFEWHNEPICCL 94
            WL +  +    G  +W   P+ C+
Sbjct: 149 LWLSSNHAPIAFGFHDWWRHPLLCM 173