Miyakogusa Predicted Gene

Lj0g3v0225489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225489.1 Non Characterized Hit- tr|I3T4T0|I3T4T0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96,9e-19,
,CUFF.14656.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g491560.1 | defective in meristem silencing protein | HC |...    81   2e-16

>Medtr3g491560.1 | defective in meristem silencing protein | HC |
           chr3:41658103-41651940 | 20130731
          Length = 417

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/50 (72%), Positives = 46/50 (92%)

Query: 1   MKDIKWKKEKVLEDLKRERTLLDMAKFNFSKKKNDFLKFLAESSSYATQV 50
           M + +WKK+KV +DLKRE+T+LDMAKF+F+KKK+DFLK+LA SSSYATQV
Sbjct: 360 MMNTQWKKDKVFDDLKREKTMLDMAKFSFNKKKSDFLKYLATSSSYATQV 409