Miyakogusa Predicted Gene

Lj0g3v0224239.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224239.1 Non Characterized Hit- tr|K3Y106|K3Y106_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si007868,32.17,7e-18,seg,NULL,CUFF.14587.1
         (346 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g070690.1 | hypothetical protein | LC | chr8:29854562-2985...   258   5e-69
Medtr2g437600.1 | hypothetical protein | HC | chr2:14789893-1479...   189   3e-48

>Medtr8g070690.1 | hypothetical protein | LC |
           chr8:29854562-29853609 | 20130731
          Length = 317

 Score =  258 bits (660), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/244 (60%), Positives = 174/244 (71%), Gaps = 13/244 (5%)

Query: 112 ESPCQASNLIFKDRHVIQEIHLRRRSKSYGEARAS-APFDEFDLCLAKPNAMEHN----K 166
           ESP QASNL  K +++++EI LR+ SKS GE RAS +PFDEFD  L KP+ +EH+    K
Sbjct: 78  ESPGQASNLTLKHQYLLKEIKLRK-SKSCGEGRASLSPFDEFDHWLIKPSMVEHDYTNIK 136

Query: 167 HDYSFPKIEAIEEGPMSGKNPETPAEEEKFKC---CMYLPGFGKAKPVKSTRKEGSEMED 223
           H+ SF + EAI+E   +  + ET AEE  FKC   CM+LPGFGKAK  K T+KEGSEME 
Sbjct: 137 HE-SFSENEAIKEHHTNDSDLETNAEE-GFKCSVLCMFLPGFGKAKSAK-TKKEGSEMEG 193

Query: 224 AISSRVSLEKFECGSWASSTLLHEIEGDTTNSYYDLPMELIK-CSVSDVHAPVTSAFVFE 282
            IS  VSLEKFECGSWASS L ++IE D T+SY+DLP+ELIK  S +DVHAPVTSAFVFE
Sbjct: 194 TISRTVSLEKFECGSWASSALFNDIETDNTSSYFDLPLELIKGSSYNDVHAPVTSAFVFE 253

Query: 283 KELKGVLKNGSSRGSARKSDAAPHHVRFXXXXXXXXXXXXXXCNAAHLRKASEDFKAFLE 342
           K+LKGVLKNGSSR +ARKSD +P+HVRF              CN   LR    DF AFLE
Sbjct: 254 KDLKGVLKNGSSRTNARKSDTSPYHVRFSTSSTSHYSPSPASCNTPSLRNTKVDFNAFLE 313

Query: 343 AQST 346
           AQST
Sbjct: 314 AQST 317


>Medtr2g437600.1 | hypothetical protein | HC |
           chr2:14789893-14791388 | 20130731
          Length = 333

 Score =  189 bits (481), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/360 (38%), Positives = 194/360 (53%), Gaps = 59/360 (16%)

Query: 14  QQENRIMVDALSLN-------YD---SALPNVRTTWATTDFHLPSLQAPKTKFMSLSLPR 63
           Q+E +IMVD LSL        Y+   + LP + TT ++T  H P+LQ PK +F+SLSLP 
Sbjct: 5   QKEKQIMVDPLSLKNSPIKQMYNQETTKLPTIITT-SSTILHPPTLQPPKLRFLSLSLPN 63

Query: 64  TTWATTDFHLPSLQAPKPKFMXXXXXXXXXXXXXXXXXXXXXXXXXXXESPCQAS--NLI 121
           +  ++            P+F                            E+ C  S  N+ 
Sbjct: 64  SVNSS------------PRF-----------------DSIKKSNSGSLETQCLKSTNNVT 94

Query: 122 FKDRHVIQEIHLRRRSKSYGEARASAPFDEFDL--CLAKPNAMEHNKHDY---SFPKIEA 176
              + ++QE    + SKS G+ R SA  +EFD    L K +  E  K ++   +F K E 
Sbjct: 95  TTLQDLLQEARFGK-SKSCGDGRESASLEEFDFDQWLTKLSTKELEKWEWHYGTFTKQEH 153

Query: 177 IEEGPMSG-KNPETPAEEEKFKC---CMYLPGF-GKAKPVKSTRKEGSE-MEDAISSRVS 230
           ++E P +  K  +T    + FKC   C++LP F GK KP+K  RKE SE +   +S  VS
Sbjct: 154 VKESPKNVVKQMKTTTPHDGFKCNSLCLFLPNFVGKIKPIK-IRKEVSEKVAPTMSRNVS 212

Query: 231 LEKFECGSWASSTLLHEIEGDTTNSYYDLPMELIK-CSVSDVHAPVTSAFVFEK-ELKGV 288
           LE FECGSWAS+ + HEI+GD+ NSY+DLP+EL+K  S  +V +P++S+ V+EK +LKGV
Sbjct: 213 LENFECGSWASAAMSHEIDGDSNNSYFDLPLELMKYGSAIEVDSPISSSLVYEKDQLKGV 272

Query: 289 LKNGSSRGSARKSDAAPHHVRFXXXXXXXXXXXXXX--CNAAHLRKASEDFKAFLEAQST 346
           LKNGS+RGSARKS+ +P HVRF                C +  LRKA EDF  FL A  T
Sbjct: 273 LKNGSARGSARKSEVSPRHVRFSLSSSSSPSYPASPAFCISPRLRKAREDFNTFLAAAQT 332