Miyakogusa Predicted Gene

Lj0g3v0223749.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223749.1 Non Characterized Hit- tr|I1JL64|I1JL64_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,64.04,6e-18,FAM175PLANT,FAM175 family, plant; PROTEINF175,FAM175
family; seg,NULL,CUFF.14548.1
         (300 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g014250.1 | BRCA1-A complex subunit abraxas-like protein, ...   226   3e-59

>Medtr4g014250.1 | BRCA1-A complex subunit abraxas-like protein,
           putative | HC | chr4:3970582-3973914 | 20130731
          Length = 274

 Score =  226 bits (575), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/286 (47%), Positives = 162/286 (56%), Gaps = 35/286 (12%)

Query: 4   PPLQNIAISGPTLASLIQRFSTAPSA-IDGLLFGHVTHVXXXXXXXXXXXXXXXXXXXVT 62
           PPLQ IAISGPTL+SL+   ST  ++   GLLFGHVT                     VT
Sbjct: 5   PPLQKIAISGPTLSSLLHHLSTTSTSTFSGLLFGHVTLTTPLNLTDNSSDTTPTLLATVT 64

Query: 63  GFLSSPSFHDSTGAVNXXXXXXXXXXXXXXXGWFSARRRTPLRPSMREXXXXXXXXXXXX 122
           GFL++ SF   +G +N               GWFS     P  P++              
Sbjct: 65  GFLTTSSFLSPSGDINITTLRRLVPHSSSLLGWFSGS--PPFTPTL-----------FFL 111

Query: 123 XXXPIENSPHHRFNXXXXXXXXXXXXXXTSSHVHTHEYRAYQFRRAALSFDAKSINIVNI 182
              PI +                      SSH+HTH+YR YQF   + SF+  SI I+NI
Sbjct: 112 LSSPISDQ---------------------SSHIHTHDYRVYQFLSESQSFNPVSIEIINI 150

Query: 183 GPAFRGHYGSFSPNSPLPALNCRLRGSPMKGDDGDERLSEMKQAAKDQRELDACVEGFEV 242
           GPAF GHYGSF PNSP P L+C+L   PM  DD +E+LS+MKQ +KDQRELD C EG+EV
Sbjct: 151 GPAFWGHYGSFIPNSPFPVLDCQLSYLPMIQDDDNEKLSKMKQTSKDQRELDVCAEGYEV 210

Query: 243 GRLSSLMGSEATSYTQGLEDLYQKMLVKIETLTSLVEKSSAKVLEQ 288
            RLS+LMGSEA +YTQ LEDLY KMLVKI  LT+LVE+SSAKVLEQ
Sbjct: 211 KRLSNLMGSEAKNYTQSLEDLYLKMLVKIGNLTTLVEQSSAKVLEQ 256