Miyakogusa Predicted Gene

Lj0g3v0223669.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223669.2 Non Characterized Hit- tr|B9SAI1|B9SAI1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.05,0.00000000000003, ,CUFF.14535.2
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-54021...   226   1e-59
Medtr4g088440.1 | hypothetical protein | HC | chr4:35065681-3507...    95   5e-20

>Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-5402156
           | 20130731
          Length = 453

 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/236 (57%), Positives = 161/236 (68%), Gaps = 31/236 (13%)

Query: 1   MVSSLSRKKQSIKISHERVE------------------CVWESDKFILLETKHKWESENQ 42
           MVSSLS+KKQSIKI+HE +E                  CVW+SDKFIL E KHK E+E+Q
Sbjct: 218 MVSSLSKKKQSIKITHEGIEVFREFYPASDDVEYVTLECVWKSDKFILHERKHKKENESQ 277

Query: 43  SEDSGGIFSFQASGVNYTSIKSILGDDQLVSQRVETDPTARED---VKDMNTDLLTGSSQ 99
            EDSGG  S QASGVNY +I+SILGDDQ  S+  E D  A+ED   VKD NTDLLT  SQ
Sbjct: 278 GEDSGGNLSVQASGVNYDTIESILGDDQRDSETGEADAAAKEDPPRVKDTNTDLLTIPSQ 337

Query: 100 IDYGNETLC-SKECGESDGTAKSSFGESSQEGGLHEL------SRRHSGLKKVSFVSIKN 152
           +D   ET+  S+E GE+  T K+SF ESS EG LH L      S+ HSG KKV+F+SIKN
Sbjct: 338 LDDFMETVFGSEEGGENLSTTKASFRESSPEGDLHALSQSSTSSKLHSGSKKVAFLSIKN 397

Query: 153 PTSAPQNAQ-SIPVFTSNV--KAFHFMGNQSDQTKDDTRDSLANVLANINAKDSFF 205
           PT  PQ+ Q SI V TSN   K+FHFMGN+SDQTKD+  DSLA++L N+ AKDS F
Sbjct: 398 PTLVPQSVQSSISVLTSNAKPKSFHFMGNESDQTKDEKEDSLASILTNVKAKDSLF 453


>Medtr4g088440.1 | hypothetical protein | HC |
           chr4:35065681-35070298 | 20130731
          Length = 263

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 65/102 (63%), Gaps = 18/102 (17%)

Query: 2   VSSLSRKKQSIKISHERVE------------------CVWESDKFILLETKHKWESENQS 43
           VSSLS+ KQSIKI+HE +E                  CVW+S K+IL E KHK E+E+Q 
Sbjct: 151 VSSLSKNKQSIKITHEGIEVFREFYPVSDDNDYVTLDCVWKSHKYILDERKHKTENESQG 210

Query: 44  EDSGGIFSFQASGVNYTSIKSILGDDQLVSQRVETDPTARED 85
           ED GG  S QAS VNY +I+SILGDDQL  +R E D  A+ED
Sbjct: 211 EDFGGNLSVQASDVNYNTIESILGDDQLDPERGEADVAAKED 252