Miyakogusa Predicted Gene

Lj0g3v0223669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223669.1 Non Characterized Hit- tr|C6TEX9|C6TEX9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52573 PE,53.42,0.0001,
,CUFF.14535.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-54021...   124   1e-29

>Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-5402156
           | 20130731
          Length = 453

 Score =  124 bits (312), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/126 (58%), Positives = 89/126 (70%), Gaps = 10/126 (7%)

Query: 2   NTDLLTGSSQIDYGNETLC-SKECGESDGTAKSSFGESSQEGGLHELS------RRHSGL 54
           NTDLLT  SQ+D   ET+  S+E GE+  T K+SF ESS EG LH LS      + HSG 
Sbjct: 328 NTDLLTIPSQLDDFMETVFGSEEGGENLSTTKASFRESSPEGDLHALSQSSTSSKLHSGS 387

Query: 55  KKVSFVSIKNPTSAPQNAQS-IPVFTSNVK--AFHFMGNQSDQTKDDTRDSLANVLANIN 111
           KKV+F+SIKNPT  PQ+ QS I V TSN K  +FHFMGN+SDQTKD+  DSLA++L N+ 
Sbjct: 388 KKVAFLSIKNPTLVPQSVQSSISVLTSNAKPKSFHFMGNESDQTKDEKEDSLASILTNVK 447

Query: 112 AKDSFF 117
           AKDS F
Sbjct: 448 AKDSLF 453