Miyakogusa Predicted Gene

Lj0g3v0223659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223659.1 Non Characterized Hit- tr|G7IW53|G7IW53_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.81,0.0000000000002, ,CUFF.14534.1
         (67 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-54021...    80   5e-16
Medtr4g088440.1 | hypothetical protein | HC | chr4:35065681-3507...    73   6e-14

>Medtr3g019330.1 | hypothetical protein | HC | chr3:5409555-5402156
           | 20130731
          Length = 453

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 45/53 (84%)

Query: 5   DFVTLKCVWESDKFILLETKHKWESENQSEDSGGIFSFQASGVNYTSIKSILG 57
           ++VTL+CVW+SDKFIL E KHK E+E+Q EDSGG  S QASGVNY +I+SILG
Sbjct: 250 EYVTLECVWKSDKFILHERKHKKENESQGEDSGGNLSVQASGVNYDTIESILG 302


>Medtr4g088440.1 | hypothetical protein | HC |
           chr4:35065681-35070298 | 20130731
          Length = 263

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/53 (64%), Positives = 41/53 (77%)

Query: 5   DFVTLKCVWESDKFILLETKHKWESENQSEDSGGIFSFQASGVNYTSIKSILG 57
           D+VTL CVW+S K+IL E KHK E+E+Q ED GG  S QAS VNY +I+SILG
Sbjct: 182 DYVTLDCVWKSHKYILDERKHKTENESQGEDFGGNLSVQASDVNYNTIESILG 234