Miyakogusa Predicted Gene
- Lj0g3v0223529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0223529.1 tr|A9RVE0|A9RVE0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,24.23,1e-18,seg,NULL; Mitochondrial termination factor
repeats,Mitochodrial transcription termination factor-rel,CUFF.14524.1
(320 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g084630.1 | transcription termination factor family protei... 530 e-150
Medtr6g003960.1 | transcription termination factor family protei... 132 5e-31
Medtr5g068860.1 | transcription termination factor family protei... 114 1e-25
Medtr4g070060.1 | transcription termination factor family protei... 111 1e-24
Medtr2g034600.3 | transcription termination factor family protei... 110 2e-24
Medtr2g034600.1 | transcription termination factor family protei... 110 3e-24
Medtr2g034600.2 | transcription termination factor family protei... 109 3e-24
Medtr1g115415.1 | transcription termination factor family protei... 106 3e-23
Medtr5g094610.1 | transcription termination factor family protei... 100 2e-21
Medtr2g049780.1 | transcription termination factor family protei... 88 1e-17
Medtr2g067230.1 | transcription termination factor family protei... 78 1e-14
Medtr5g041630.1 | transcription termination factor family protei... 75 7e-14
Medtr8g105560.1 | transcription termination factor family protei... 75 9e-14
Medtr2g437130.1 | transcription termination factor family protei... 70 3e-12
Medtr3g092710.1 | plastid transcriptionally active 15 protein | ... 68 1e-11
Medtr7g081270.1 | transcription termination factor family protei... 67 2e-11
Medtr4g120380.1 | mTERF protein | LC | chr4:49903904-49905982 | ... 60 2e-09
Medtr2g438020.1 | mTERF protein | LC | chr2:15022188-15025546 | ... 60 2e-09
Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 | ... 60 2e-09
Medtr8g012210.1 | transcription termination factor family protei... 58 1e-08
Medtr8g081000.3 | transcription termination factor family protei... 55 9e-08
Medtr8g081000.2 | transcription termination factor family protei... 55 9e-08
Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 | ... 55 9e-08
Medtr8g081000.1 | transcription termination factor family protei... 55 9e-08
Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 | ... 54 2e-07
Medtr2g437180.1 | mTERF protein | LC | chr2:14546717-14548665 | ... 54 3e-07
Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 | ... 52 9e-07
Medtr8g080990.1 | transcription termination factor family protei... 49 8e-06
>Medtr4g084630.1 | transcription termination factor family protein |
HC | chr4:32962573-32960937 | 20130731
Length = 332
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/308 (81%), Positives = 281/308 (91%)
Query: 13 MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKI 72
MMWFFK RGFDD IQ MF KCKRLE H+E+A+ENW+YL++IGIQERKLPSIVSKCPKI
Sbjct: 9 MMWFFKHRGFDDTIIQKMFTKCKRLETAHRERADENWDYLKTIGIQERKLPSIVSKCPKI 68
Query: 73 LALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEK 132
L LGLNEKIVPMVECL TL TKPHEVASAIAKFP ILS SVEEKLCPLLAFFQ LGVPEK
Sbjct: 69 LVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPLLAFFQTLGVPEK 128
Query: 133 QIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDP 192
IGK++LLNPRLISYSIETKM EIV FLA +GL+K+GMIGK++VKDPYIMGYSV+KRL P
Sbjct: 129 HIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKDPYIMGYSVDKRLRP 188
Query: 193 TSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPP 252
TS+FLKSIGL E DLQV+A+NFPSILSRDV+K+LV N+ +LK CGFQ RQIVDLVVG+PP
Sbjct: 189 TSEFLKSIGLTEHDLQVLALNFPSILSRDVDKVLVHNYDFLKNCGFQGRQIVDLVVGYPP 248
Query: 253 ILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLS 312
ILIKS++NSLEPRIKFLVDVMGR+VDE++DYPCFFRHGLKKKL RHK LK+RNL+CSLS
Sbjct: 249 ILIKSVRNSLEPRIKFLVDVMGREVDEIIDYPCFFRHGLKKKLVSRHKLLKKRNLNCSLS 308
Query: 313 EMLDCNEK 320
EMLDCNEK
Sbjct: 309 EMLDCNEK 316
>Medtr6g003960.1 | transcription termination factor family protein |
HC | chr6:35948-29152 | 20130731
Length = 609
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 36/305 (11%)
Query: 50 EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHIL 109
+ L++IGI ++P+I+ P IL + E + V L + + A + K+P +L
Sbjct: 283 DILQNIGIPADRIPNIILAFPPILLWNV-ELLQTRVLALNQIDGVDKDYAKLMLKYPWVL 341
Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLIS----------------------- 146
S S++E +LAF ++ VP+ + I P+L+
Sbjct: 342 STSIQENYKEVLAFLHSVKVPKTWTDRAIKRQPQLLGCSTSKLKLMVDQFAELGVQRKKL 401
Query: 147 YSIETK-----------MAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQ 195
Y + T+ ++V F +G +K+ IG++L + P I S+ K L +
Sbjct: 402 YQVITRSPQLLLQKPEDFLQVVMFFENMGFDKEN-IGRILARCPEIFATSISKTLQSKIE 460
Query: 196 FLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILI 255
FL I +++ + +V +P +L D+NK L Y K G +++I +V F P+L
Sbjct: 461 FLSRIEVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKVGLSEKEIALMVRKFSPLLG 520
Query: 256 KSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEML 315
SI+ L P+++FLV+ M R V +VV YP +F + L+KK++ R++ LK RN+ CSL +ML
Sbjct: 521 YSIKEVLMPKLEFLVNSMKRPVRDVVRYPRYFSYSLEKKIKPRYRVLKGRNIECSLKDML 580
Query: 316 DCNEK 320
N++
Sbjct: 581 AKNDE 585
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQEKA-NENWEYLRSIGIQERKLPSIVSKCPKILA 74
FF++ GFD +I + +C + K E+L I + + +P ++ K P++L
Sbjct: 425 FFENMGFDKENIGRILARCPEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLV 484
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFF-QALGVPEKQ 133
+N+ + + +G E+A + KF +L +S++E L P L F ++ P +
Sbjct: 485 SDINKTLPQRIVYFMKVGLSEKEIALMVRKFSPLLGYSIKEVLMPKLEFLVNSMKRPVRD 544
Query: 134 IGKMILLNPRLISYSIETKM 153
+ + PR SYS+E K+
Sbjct: 545 VVRY----PRYFSYSLEKKI 560
>Medtr5g068860.1 | transcription termination factor family protein |
HC | chr5:29165945-29163659 | 20130731
Length = 530
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 141/273 (51%), Gaps = 6/273 (2%)
Query: 50 EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHIL 109
+YL+ + I+ +P ++ + P++L L + V L +G E+ + +FP IL
Sbjct: 212 KYLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEIL 271
Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
V + P + + ++LG+P I ++I P ++ + ++ K+ V L + ++
Sbjct: 272 GMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNV-RET 330
Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSI-GLAEKDLQVVAMNFPSILSRDVNKLLVP 228
+ ++ + P I+G +E +L L S+ L +D ++ P ++S +L
Sbjct: 331 SLASIIAQYPDIIGTDLEPKLADKRSVLNSVLDLDAEDFGLIIEKMPQVVSLSSTPML-- 388
Query: 229 NHA-YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFF 287
H +LK CGF Q+ ++VG P +L +I + ++ + M R ++++V++P FF
Sbjct: 389 KHVDFLKDCGFSVDQMRKMIVGCPQLLALNI-DIMKLSFDYFQSEMERPLEDLVEFPAFF 447
Query: 288 RHGLKKKLQLRHKFLKQRNLSCSLSEMLDCNEK 320
+GL+ ++ RH + ++ L CSL+ ML+C+++
Sbjct: 448 TYGLESTIKPRHNMVTKKGLKCSLAWMLNCSDE 480
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 15/257 (5%)
Query: 49 WEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHI 108
+E+LR IGI +L + + P + + + E+ V+ L +LG + I +P +
Sbjct: 114 YEFLRGIGIVPDELDGL--ELPVTVDV-MKER----VDFLHSLGLTIED----INNYPLV 162
Query: 109 LSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKD 168
L SV++ + P+L + LGV + I + + P+++ S+ + +V +L G+ + D
Sbjct: 163 LGCSVKKNMVPVLDYLGKLGVRKSTITQFLRTYPQVLHASVVVDLVPVVKYLQGMDIKPD 222
Query: 169 GMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVP 228
I +VL + P ++G+ +E + + +L IG+ ++L + FP IL V +++ P
Sbjct: 223 D-IPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKP 281
Query: 229 NHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDE---VVDYPC 285
YL+ G I L+ P IL + ++P +K L + R+ + YP
Sbjct: 282 FVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPD 341
Query: 286 FFRHGLKKKLQLRHKFL 302
L+ KL + L
Sbjct: 342 IIGTDLEPKLADKRSVL 358
>Medtr4g070060.1 | transcription termination factor family protein |
HC | chr4:26370303-26365871 | 20130731
Length = 617
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 3/289 (1%)
Query: 33 KCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLG 92
+C +L E+ ++ +G+ + ++V PK L E++ V+ LK G
Sbjct: 297 RCPKLLSYSLEEVKTRVQFYLDMGLDAKDFGTMVFDFPKALGHYTLEEMNRKVDYLKEFG 356
Query: 93 TKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETK 152
+ +V +A P +++ S+EE+ PL+ + G+ + +M+ + P + +E
Sbjct: 357 LESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMT 416
Query: 153 MAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKS-IGLAEKDLQVVA 211
+ V F LG+ DG I K+LVK P ++ YS+ K++ P FL + G+ E+++ V
Sbjct: 417 IVPKVKFFQDLGVRNDG-IAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEENIPKVI 475
Query: 212 MNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVD 271
P +L + L N Y G + +Q+ +++ FP +L +I + L P+ +L
Sbjct: 476 ALGPELLGCSIVHKLEGNVKYYLSLGIRLQQLGEMIADFPMLLRYNI-DVLRPKYTYLRK 534
Query: 272 VMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEMLDCNEK 320
M R + + +++P FF + L+ ++ RHK L + ++ L ML C ++
Sbjct: 535 TMVRTLKDAIEFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDE 583
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 72 ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
+++ G E I VE LK++ K + A+ K + + +L ++ + + GV
Sbjct: 229 LMSRGKLESIRNRVEWLKSVLVKGEFIGDAMLKSGDNVLLRSDGELDEIVDYLEFNGVRR 288
Query: 132 KQIGKMILLNPRLISYSIE-----------------------------------TKMAEI 156
+ +G ++ P+L+SYS+E +M
Sbjct: 289 EWMGYVVSRCPKLLSYSLEEVKTRVQFYLDMGLDAKDFGTMVFDFPKALGHYTLEEMNRK 348
Query: 157 VDFLAGLGL-NKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFP 215
VD+L GL +KD +GK+L P +M S+E++ P ++L G+ ++ + P
Sbjct: 349 VDYLKEFGLESKD--VGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKP 406
Query: 216 SILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMG 274
+ D+ +VP + + G ++ I ++V FP +L S+ + P + FL+ G
Sbjct: 407 MVFCVDLEMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTKAG 465
>Medtr2g034600.3 | transcription termination factor family protein |
HC | chr2:13233799-13236843 | 20130731
Length = 496
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 141/268 (52%), Gaps = 6/268 (2%)
Query: 51 YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILS 110
YL +G+ ++ SI+ + P L KI P+VE LG ++ + K P +
Sbjct: 217 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 276
Query: 111 HSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGM 170
S+ + L P + FF++LGV ++Q K+I P L++YS + K+ E +DFL G++++
Sbjct: 277 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEEN- 334
Query: 171 IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNH 230
IGK+L + P I+ YSVE L PT+ + +S+G+ D+ ++ N P + + P
Sbjct: 335 IGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVT 391
Query: 231 AYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHG 290
+ + G+ +I ++ + + S+ +L P+ + + M E+V +P FF +
Sbjct: 392 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFL-TMDYPKSELVKFPQFFGYS 450
Query: 291 LKKKLQLRHKFLKQRNLSCSLSEMLDCN 318
L+++++ R+ +K + L+++L +
Sbjct: 451 LEQRIKPRYTRVKISGVRLLLNQVLSLS 478
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQE-KANENWEYLRSIGIQERKLPSIVSKCPKILA 74
+ + G + + ++ + R+ E K E+ +G+ + K+ I++K P++
Sbjct: 217 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 276
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
+ L++ + P ++ ++LG + A I +FP +L++S +K+ L F + GV E+ I
Sbjct: 277 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYST-QKINESLDFLREFGVSEENI 335
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
GK++ P ++SYS+E + + LG++ +G +L P G S+E + P +
Sbjct: 336 GKILTRCPTIVSYSVEDNLRPTAMYFRSLGVD----VGLLLFNCPQNFGLSIEANIKPVT 391
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
QF G +++ ++ + + + + + L+P Y + ++V FP
Sbjct: 392 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVK----FPQFF 447
Query: 255 IKSIQNSLEPR 265
S++ ++PR
Sbjct: 448 GYSLEQRIKPR 458
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 14 MWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKIL 73
M FF+ G D + + L +K NE+ ++LR G+ E + I+++CP I+
Sbjct: 287 MKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPTIV 346
Query: 74 ALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQ 133
+ + + + P ++LG +V + P S+E + P+ FF G ++
Sbjct: 347 SYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEE 403
Query: 134 IGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPT 193
IG MI L ++S+ + D+ + K LVK P GYS+E+R+ P
Sbjct: 404 IGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSE-----LVKFPQFFGYSLEQRIKPR 458
Query: 194 SQFLKSIG---LAEKDLQVVAMNFPSILSRDVNKLLV 227
+K G L + L + + NF IL + + K+ V
Sbjct: 459 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQV 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 113 VEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIG 172
E L P +A+ LG+ Q+ ++ P YS+E K+ +V+F LG+ K+ +I
Sbjct: 207 AEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKII- 265
Query: 173 KVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA- 231
+L K P + G S+ K L PT +F +S+G+ ++ V FP++L+ K+ N +
Sbjct: 266 IILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKI---NESL 322
Query: 232 -YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEP 264
+L++ G + I ++ P I+ S++++L P
Sbjct: 323 DFLREFGVSEENIGKILTRCPTIVSYSVEDNLRP 356
>Medtr2g034600.1 | transcription termination factor family protein |
HC | chr2:13233091-13236843 | 20130731
Length = 557
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 141/268 (52%), Gaps = 6/268 (2%)
Query: 51 YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILS 110
YL +G+ ++ SI+ + P L KI P+VE LG ++ + K P +
Sbjct: 278 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 337
Query: 111 HSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGM 170
S+ + L P + FF++LGV ++Q K+I P L++YS + K+ E +DFL G++++
Sbjct: 338 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEEN- 395
Query: 171 IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNH 230
IGK+L + P I+ YSVE L PT+ + +S+G+ D+ ++ N P + + P
Sbjct: 396 IGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVT 452
Query: 231 AYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHG 290
+ + G+ +I ++ + + S+ +L P+ + + M E+V +P FF +
Sbjct: 453 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFL-TMDYPKSELVKFPQFFGYS 511
Query: 291 LKKKLQLRHKFLKQRNLSCSLSEMLDCN 318
L+++++ R+ +K + L+++L +
Sbjct: 512 LEQRIKPRYTRVKISGVRLLLNQVLSLS 539
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQE-KANENWEYLRSIGIQERKLPSIVSKCPKILA 74
+ + G + + ++ + R+ E K E+ +G+ + K+ I++K P++
Sbjct: 278 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 337
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
+ L++ + P ++ ++LG + A I +FP +L++S +K+ L F + GV E+ I
Sbjct: 338 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYST-QKINESLDFLREFGVSEENI 396
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
GK++ P ++SYS+E + + LG++ +G +L P G S+E + P +
Sbjct: 397 GKILTRCPTIVSYSVEDNLRPTAMYFRSLGVD----VGLLLFNCPQNFGLSIEANIKPVT 452
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
QF G +++ ++ + + + + + L+P Y + ++V FP
Sbjct: 453 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVK----FPQFF 508
Query: 255 IKSIQNSLEPR 265
S++ ++PR
Sbjct: 509 GYSLEQRIKPR 519
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 14 MWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKIL 73
M FF+ G D + + L +K NE+ ++LR G+ E + I+++CP I+
Sbjct: 348 MKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPTIV 407
Query: 74 ALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQ 133
+ + + + P ++LG +V + P S+E + P+ FF G ++
Sbjct: 408 SYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEE 464
Query: 134 IGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPT 193
IG MI L ++S+ + D+ + K LVK P GYS+E+R+ P
Sbjct: 465 IGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSE-----LVKFPQFFGYSLEQRIKPR 519
Query: 194 SQFLKSIG---LAEKDLQVVAMNFPSILSRDVNKLLV 227
+K G L + L + + NF IL + + K+ V
Sbjct: 520 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQV 556
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 113 VEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIG 172
E L P +A+ LG+ Q+ ++ P YS+E K+ +V+F LG+ K+ +I
Sbjct: 268 AEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKII- 326
Query: 173 KVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA- 231
+L K P + G S+ K L PT +F +S+G+ ++ V FP++L+ K+ N +
Sbjct: 327 IILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKI---NESL 383
Query: 232 -YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFL 269
+L++ G + I ++ P I+ S++++L P +
Sbjct: 384 DFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYF 422
>Medtr2g034600.2 | transcription termination factor family protein |
HC | chr2:13233091-13236856 | 20130731
Length = 561
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 141/268 (52%), Gaps = 6/268 (2%)
Query: 51 YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILS 110
YL +G+ ++ SI+ + P L KI P+VE LG ++ + K P +
Sbjct: 282 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 341
Query: 111 HSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGM 170
S+ + L P + FF++LGV ++Q K+I P L++YS + K+ E +DFL G++++
Sbjct: 342 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEEN- 399
Query: 171 IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNH 230
IGK+L + P I+ YSVE L PT+ + +S+G+ D+ ++ N P + + P
Sbjct: 400 IGKILTRCPTIVSYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVT 456
Query: 231 AYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHG 290
+ + G+ +I ++ + + S+ +L P+ + + M E+V +P FF +
Sbjct: 457 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFL-TMDYPKSELVKFPQFFGYS 515
Query: 291 LKKKLQLRHKFLKQRNLSCSLSEMLDCN 318
L+++++ R+ +K + L+++L +
Sbjct: 516 LEQRIKPRYTRVKISGVRLLLNQVLSLS 543
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 10/251 (3%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQE-KANENWEYLRSIGIQERKLPSIVSKCPKILA 74
+ + G + + ++ + R+ E K E+ +G+ + K+ I++K P++
Sbjct: 282 YLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCG 341
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
+ L++ + P ++ ++LG + A I +FP +L++S +K+ L F + GV E+ I
Sbjct: 342 ISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYST-QKINESLDFLREFGVSEENI 400
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
GK++ P ++SYS+E + + LG++ +G +L P G S+E + P +
Sbjct: 401 GKILTRCPTIVSYSVEDNLRPTAMYFRSLGVD----VGLLLFNCPQNFGLSIEANIKPVT 456
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
QF G +++ ++ + + + + + L+P Y + ++V FP
Sbjct: 457 QFFLERGYTMEEIGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVK----FPQFF 512
Query: 255 IKSIQNSLEPR 265
S++ ++PR
Sbjct: 513 GYSLEQRIKPR 523
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 14 MWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKIL 73
M FF+ G D + + L +K NE+ ++LR G+ E + I+++CP I+
Sbjct: 352 MKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESLDFLREFGVSEENIGKILTRCPTIV 411
Query: 74 ALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQ 133
+ + + + P ++LG +V + P S+E + P+ FF G ++
Sbjct: 412 SYSVEDNLRPTAMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEE 468
Query: 134 IGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPT 193
IG MI L ++S+ + D+ + K LVK P GYS+E+R+ P
Sbjct: 469 IGIMIKRYGMLYTFSLTENLMPKWDYFLTMDYPKSE-----LVKFPQFFGYSLEQRIKPR 523
Query: 194 SQFLKSIG---LAEKDLQVVAMNFPSILSRDVNKLLV 227
+K G L + L + + NF IL + + K+ V
Sbjct: 524 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQV 560
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 113 VEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIG 172
E L P +A+ LG+ Q+ ++ P YS+E K+ +V+F LG+ K+ +I
Sbjct: 272 AEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKII- 330
Query: 173 KVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA- 231
+L K P + G S+ K L PT +F +S+G+ ++ V FP++L+ K+ N +
Sbjct: 331 IILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKI---NESL 387
Query: 232 -YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFL 269
+L++ G + I ++ P I+ S++++L P +
Sbjct: 388 DFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPTAMYF 426
>Medtr1g115415.1 | transcription termination factor family protein |
HC | chr1:52109146-52107512 | 20130731
Length = 501
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 144/305 (47%), Gaps = 36/305 (11%)
Query: 51 YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILS 110
YL IGI KL + P++L + ++ P+++ L+ L + ++ + K+P +L
Sbjct: 145 YLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPELLG 204
Query: 111 HSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGM 170
+E + +A+ ++GV + IG M+ P + + T + +VD+L LGL K +
Sbjct: 205 FKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKR-I 263
Query: 171 IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNH 230
+ ++L K Y++GY +E+ + P L S GL ++ L V +P I+ + L
Sbjct: 264 LARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLIIGLPLKAKLSSQQ 323
Query: 231 AYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLV-------DV----------- 272
+ D + VV P ++ QN + ++FL+ DV
Sbjct: 324 YFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIPSQDVASMVIKCPQLV 383
Query: 273 -----------------MGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEML 315
MGR V E+V++P +F + L+ +++ R++ LK + + CSL+ ML
Sbjct: 384 ALRVELMKNSYYFFKSEMGRPVKELVEFPEYFTYSLESRIKPRYQRLKTKGIKCSLNWML 443
Query: 316 DCNEK 320
+C+++
Sbjct: 444 NCSDQ 448
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 49 WEYLRSIGI-----QERKLPSIV--------------------SKCPKILALGLNEKIVP 83
++YL+ +GI Q+ +LPS V ++ P IL + + ++P
Sbjct: 82 FDYLKGLGIIPDELQDLELPSTVEVMRERVEFIQKLGLTIDDINQYPLILGCSVRKNMIP 141
Query: 84 MVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPR 143
++ L+ +G ++ I +P +L SV +L P++ F + L V + IG ++ P
Sbjct: 142 VLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPE 201
Query: 144 LISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLA 203
L+ + +E M+ V +L +G+N IG ++ + PY +G V + P +L ++GL
Sbjct: 202 LLGFKLEGTMSTSVAYLVSIGVNPRD-IGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLP 260
Query: 204 EKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
++ L + +L D+ + + PN L G + + ++ +P I+
Sbjct: 261 KRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLII 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 56 GIQERKLPSIVSKCPKI---LALGLNEKIVPMV---ECLKTLGTKPHEVASAIAKFPHIL 109
G Q+ K P + P + + G EK+V V + LK LG P E+ + P
Sbjct: 49 GTQDSKFPEY--EMPTVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDL--ELP--- 101
Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
S E + + F Q LG+ I + P ++ S+ M ++ +L +G+++
Sbjct: 102 --STVEVMRERVEFIQKLGLTIDDINQY----PLILGCSVRKNMIPVLGYLEKIGISRSK 155
Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPN 229
+ G+ + P ++ SV L P +FL+ + + + D+ V +P +L + + +
Sbjct: 156 L-GEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTS 214
Query: 230 HAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVD-----------------V 272
AYL G R I +V +P L + ++P + +LV+ +
Sbjct: 215 VAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVNLGLPKRILARMLEKRAYL 274
Query: 273 MGRQVDEVV--DYPCFFRHGLKKK 294
+G ++E V + C GL+K+
Sbjct: 275 LGYDLEETVKPNVDCLISFGLRKE 298
>Medtr5g094610.1 | transcription termination factor family protein |
HC | chr5:41344877-41348219 | 20130731
Length = 503
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 46 NENW----EYLRSIGIQERKLPSIVSK---CPKILALGLNEKIVPMVECLKTLGTKPHEV 98
+E W +YL + GI+E + I + +I E+I + L +LG K ++
Sbjct: 188 DEKWLPLLDYLSTFGIKESQFIQIYERHMSSFQINVCSAQERI----DYLMSLGVKHKDI 243
Query: 99 ASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVD 158
+ + P IL ++VE L +AF LGVP +IG++I P L SYS+E + V
Sbjct: 244 RRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIASTPSLFSYSVEKSLKPTVR 303
Query: 159 FLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFL-KSIGLAEKDLQVVAMNFPSI 217
+L K+ +GKV+ P I+ ++ + FL K + ++ + + P +
Sbjct: 304 YLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRLMFLNKELDAPKESIVKMVTKHPQL 363
Query: 218 LSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQV 277
L ++ L+P +L+ G ++ I+ ++ +L S++ +L+P+ +LV+ + +V
Sbjct: 364 LHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEV 423
Query: 278 DEVVDYPCFFRHGLKKKLQLRHKFL 302
+ YP + L ++++ RHKFL
Sbjct: 424 QTLTKYPMYLSLSLDQRIRPRHKFL 448
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 6/230 (2%)
Query: 45 ANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAK 104
A E +YL S+G++ + + I+ + P+IL + + V L LG ++ IA
Sbjct: 226 AQERIDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIAS 285
Query: 105 FPHILSHSVEEKLCPLLAFF-QALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAG- 162
P + S+SVE+ L P + + + +G+ EK +GK+I L+P+++ I+ + FL
Sbjct: 286 TPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRLMFLNKE 345
Query: 163 LGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDV 222
L K+ ++ K++ K P ++ YS++ L P FL+SIG+ D+ + + +LS +
Sbjct: 346 LDAPKESIV-KMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSL 404
Query: 223 NKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDV 272
L P + YL + V + +P L S+ + PR KFLV +
Sbjct: 405 EANLKPKYLYLVNELHNE---VQTLTKYPMYLSLSLDQRIRPRHKFLVSL 451
>Medtr2g049780.1 | transcription termination factor family protein |
HC | chr2:22364848-22363786 | 20130731
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 73 LALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEK 132
L+L EKI+ CL+ +G + A+++ P++ + ++E + ++ F + G+ K
Sbjct: 65 LSLQFKEKIL----CLEVMGI---DSGKALSQNPNLHTATLES-IHSIITFLVSKGIQHK 116
Query: 133 QIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDP 192
+ ++ + P++++ SI+T + + DFL D KV+ K P ++ SV +L P
Sbjct: 117 DLPRIFGMCPKILTSSIKTDLNPVFDFLIHDLKVPDHSFRKVIKKCPRLLTSSVVDQLKP 176
Query: 193 TSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPP 252
+L +GL +DL+ +A +L +V + ++P +L+ GF + +V+ P
Sbjct: 177 ALFYLNRLGL--RDLEALAYQDCVLLVSNVERTIIPKLKHLESLGFTKEEARCMVLRCPA 234
Query: 253 ILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLS 312
+L SI+N+ +P+ ++ M +++E+ ++P +F L+ ++++RH + + ++ LS
Sbjct: 235 LLTFSIENNFQPKFEYFSVEMKGKLEELKEFPQYFSFSLENRIKVRHMEVVESGINLPLS 294
Query: 313 EMLDCNE 319
ML +
Sbjct: 295 LMLKSTD 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 51 YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECL-KTLGTKPHEVASAIAKFPHIL 109
+L S GIQ + LP I CPKIL + + P+ + L L H I K P +L
Sbjct: 107 FLVSKGIQHKDLPRIFGMCPKILTSSIKTDLNPVFDFLIHDLKVPDHSFRKVIKKCPRLL 166
Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
+ SV ++L P L + LG+ + + + + L+ ++E + + L LG K+
Sbjct: 167 TSSVVDQLKPALFYLNRLGL--RDLEALAYQDCVLLVSNVERTIIPKLKHLESLGFTKEE 224
Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFL 197
VL + P ++ +S+E P ++
Sbjct: 225 ARCMVL-RCPALLTFSIENNFQPKFEYF 251
>Medtr2g067230.1 | transcription termination factor family protein |
HC | chr2:28121064-28123893 | 20130731
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 100 SAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDF 159
S I P +++ S+++ + + + + + +++ + P +++ TK+++I+
Sbjct: 85 SLIENHPKLVTASLDD-IKSTVKYITGMDFSSIEFRRLVGMCPEILT----TKVSDIIPV 139
Query: 160 LAGL-------GLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAM 212
L G N I V+ + P ++ +V+K+L PT FL+SIG+ E +
Sbjct: 140 FTFLHREVRVIGSN----IKHVINRRPRLIICNVDKQLRPTMYFLQSIGIEEVNKHT--- 192
Query: 213 NFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDV 272
+LS V +P Y K GF R + FP + SI+N+LEP+ + V
Sbjct: 193 ---HLLSCSVEDKFIPRIEYFKNIGFSRRDTTSMFRRFPQLFCYSIKNNLEPKYNYFVVE 249
Query: 273 MGRQVDEVVDYPCFFRHGLKKKLQLRHK 300
MGR + EV ++P +F L+ +++ RHK
Sbjct: 250 MGRDLKEVKEFPHYFSFSLENRIKPRHK 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 50 EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECL----KTLGTKPHEVASAIAKF 105
+Y+ + + +V CP+IL +++ I+P+ L + +G+ + I +
Sbjct: 106 KYITGMDFSSIEFRRLVGMCPEILTTKVSD-IIPVFTFLHREVRVIGS---NIKHVINRR 161
Query: 106 PHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGL 165
P ++ +V+++L P + F Q++G+ E + K + L+S S+E K +++ +G
Sbjct: 162 PRLIICNVDKQLRPTMYFLQSIGIEE--VNK----HTHLLSCSVEDKFIPRIEYFKNIGF 215
Query: 166 NKDGMIGKVLVKDPYIMGYSVEKRLDPT-SQFLKSIGLAEKDLQVVAMNFPSILSRDVNK 224
++ + + P + YS++ L+P + F+ +G +DL+ V FP S +
Sbjct: 216 SRRDTTS-MFRRFPQLFCYSIKNNLEPKYNYFVVEMG---RDLKEVK-EFPHYFSFSLEN 270
Query: 225 LLVPNHAYLKKCGFQDRQIVDLVVGFP-PILIKSIQNSLEPRIKFLVD-----------V 272
+ P H K+C V++ V FP P+L+K+ + + + R++ V+
Sbjct: 271 RIKPRH---KRC-------VEMGVCFPLPLLLKTSEVTFQNRLEAFVNSSTPLKTSPLWC 320
Query: 273 MGRQVDEV 280
GR +D+V
Sbjct: 321 AGRDIDQV 328
>Medtr5g041630.1 | transcription termination factor family protein |
HC | chr5:18278077-18276642 | 20130731
Length = 308
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 118 CPLLAF------FQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMI 171
CPL ++G+ Q+G+++ + P L++ + + ++DFL +
Sbjct: 84 CPLRTLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDV 143
Query: 172 GKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA 231
K +++ P ++ SVE RL P FL+ +G +L V L+P
Sbjct: 144 HKSILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTL--LLVSSVEDTLLPKVE 201
Query: 232 YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGL 291
+L GF ++ ++VV P +L S+ +L P+ +F + M V E+ +P +F L
Sbjct: 202 FLMGLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKFEFFLKEMNGDVAELKRFPQYFSFSL 261
Query: 292 KKKLQLRHKFLKQRNLSCSLSEMLDCNE 319
+ +++ RH L + LS SL EML ++
Sbjct: 262 EGRIKPRHAMLVRLGLSLSLQEMLQISD 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 52 LRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKP-HEVASAIAKFPHILS 110
L SIGI ++ I+ P++L I P+++ L P H+V +I + P +L
Sbjct: 96 LSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKSILRCPRLLV 155
Query: 111 HSVEEKLCPLLAFFQALGV--PEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKD 168
SVE +L P L F + LG P + LL L+S S+E + V+FL GLG +
Sbjct: 156 SSVENRLRPALCFLRELGFVGPHSLTCQTTLL---LVS-SVEDTLLPKVEFLMGLGFTRV 211
Query: 169 GMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAM-NFPSILSRDVNKLLV 227
+ ++V+ P ++ +SV+K L P +F L E + V + FP S + +
Sbjct: 212 E-VSNMVVRSPGLLTFSVDKNLAPKFEFF----LKEMNGDVAELKRFPQYFSFSLEGRIK 266
Query: 228 PNHAYLKKCG 237
P HA L + G
Sbjct: 267 PRHAMLVRLG 276
>Medtr8g105560.1 | transcription termination factor family protein |
HC | chr8:44520352-44517998 | 20130731
Length = 560
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 120/257 (46%), Gaps = 24/257 (9%)
Query: 80 KIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMIL 139
++ P+++ L+ L + ++ + K+P +L +E + +A+ ++GV + IG M+
Sbjct: 121 ELAPVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVA 180
Query: 140 LNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKS 199
P + + T + VD+L LGL K ++ ++L K Y++GY +E+ + P L S
Sbjct: 181 QYPYFLGMRVGTMIKPFVDYLVNLGLPKK-ILARMLEKRAYLLGYVLEETMKPNVDCLIS 239
Query: 200 IGLAEKDLQVVAMNFPSILSRDVN-KLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSI 258
GL ++ L V +P I+ + KL + + Y K +V P + +
Sbjct: 240 FGLRKECLPSVIAQYPQIIGLPLTAKLSLQQYFYSLKLKIDSEGFAKVVEKMPQV-VSLH 298
Query: 259 QNSLEPRIKFLV-----------------DVMGRQVDEVVDYPCFFRHGLKKKLQLRHKF 301
QN + ++FL+ ++ +V+ + + FF+ + + + K
Sbjct: 299 QNVIMKPVEFLLGRAIPLQDVASMVIKCPQLIALRVELMKNNYYFFKREMGRPV----KE 354
Query: 302 LKQRNLSCSLSEMLDCN 318
LK + CSL+ ML+C+
Sbjct: 355 LKSKGRKCSLNWMLNCS 371
>Medtr2g437130.1 | transcription termination factor family protein |
HC | chr2:14524445-14525993 | 20130731
Length = 387
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 28 QGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVEC 87
+ + KRL +K N + + ++G + + SI+ K P++L+ + I+P +
Sbjct: 59 EAALKASKRLRFNSPQKPNSVFNFFTNLGFSDSNIRSIIIKQPRLLSSDTHNSILPKFQF 118
Query: 88 LKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISY 147
+ G E+A +A P IL +S+E ++ PL F++ +K I+ N + Y
Sbjct: 119 FLSKGASSSEIACLLAANPRILQNSLENRIIPLFEFYKRFFKSDKATICCIIRNLISLPY 178
Query: 148 SIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDL 207
++ T V L G+ D I ++L+ P I+G S++ T + +K +G L
Sbjct: 179 NLTTVN---VKLLIDYGVC-DSAIARLLLTRPAILG-SID--FISTLEEVKGLGF---HL 228
Query: 208 QVVAMNFPSILSRDVNKLLVPNHA-YLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRI 266
+ + ++K L KK G+ D ++ G P +L+ SI + + I
Sbjct: 229 STSTFGAALVAKKCMSKTLWDEKVDVFKKWGWTDEDVIRAFRGRPELLLTSI-DKINLVI 287
Query: 267 KFLVDVMGRQVDEVVDYPCFFRHGLKKKL 295
F V+ +G + P F + L K++
Sbjct: 288 SFWVNQLGWNSLALSKRPRIFSYSLHKRI 316
>Medtr3g092710.1 | plastid transcriptionally active 15 protein | HC
| chr3:42360298-42362077 | 20130731
Length = 506
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 65 IVSKCPKILALGLNEKIVPMVECLKTL-GTKPHEVASAIAKFPHILSHSVE--EKLCPLL 121
++ K P IL L+ +++P + L L G + + +FP IL++SVE E+ L
Sbjct: 236 LIVKHPVILNCDLHNQLIPRIRVLTALSGGDEDSIGKVLNRFPIILNYSVEHLEEHIKFL 295
Query: 122 AFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYI 181
F L ++QI K++L+ P + + S E K+ + FL GL+ D I K+L K
Sbjct: 296 RCFADLD--DQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADE-IFKLLTKAALF 352
Query: 182 MGYSVEKRLDPTSQFLKSIGLA--EKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQ 239
+ S L L IG K+L V I ++ K++ + GF
Sbjct: 353 LSISFRSNLAYKLGVLVKIGYKYRTKELAVAIAASTRISCENMQKMV----SLFLNYGFS 408
Query: 240 DRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRH 299
I + P IL + SLE ++ ++++ M R + E++D+P + + L +++ R+
Sbjct: 409 LEDIFAMSKKHPQIL-QYHHASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHRY 467
Query: 300 KFLKQ-RNLSCSLSEMLDCNEK 320
+ K R S++++L + +
Sbjct: 468 EIKKDLRGEQMSINKLLTVSSE 489
>Medtr7g081270.1 | transcription termination factor family protein |
HC | chr7:31009132-31008262 | 20130731
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 120 LLAFFQALGVPEKQIGKMILLNPRLISYSIE-TKMAEIVDFLAGLGLNKDGMIGKVLVKD 178
++ F ++ E I +++ +P L + SI T ++ + FLA L ++++
Sbjct: 77 IITFLKSHSFTEADIPRLVHHSPHLFTTSISPTSLSPVFTFLASDLLASVEDSHGLILRC 136
Query: 179 PYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPS-----ILSRDVNKLLVPNHAYL 233
P ++ V L PT FL+ +++ V +N P+ +L+ V K+ +
Sbjct: 137 PNLLFTDVNHILKPTLHFLR------EEVGVSNLNRPTNRNAHLLNTRVEKMRMRVRFLE 190
Query: 234 KKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKK 293
+ GF + ++ P IL ++N+L P+ +LV M R+V+E+ +P FF L K
Sbjct: 191 EVVGFTYEEARNVCARLPAILGYDVENNLWPKFVYLVKEMEREVEELKKFPQFFGFSLDK 250
Query: 294 KLQLRHKFLKQRNLSCSLSEML 315
++ RH LK+R + L+ ML
Sbjct: 251 RIVPRHLHLKERGVRIPLNRML 272
>Medtr4g120380.1 | mTERF protein | LC | chr4:49903904-49905982 |
20130731
Length = 420
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQEKAN-ENWEYLRSIGIQERKLPSIVSKCPKILA 74
FFK GF D+ IQ + RK L V + K +++L S G + + + V++ P L
Sbjct: 83 FFKTHGFSDHQIQTIIRKIPLLIVYNPIKTILPKFQFLASKGASPKDIVATVTRSPNFLC 142
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
L++ I+P E +++ H+ +++ P S + + P L F GV I
Sbjct: 143 SSLDKNIIPSFELVRSFCPSDHKAITSVIICP---SSICDSRFKPNLQFLLDFGVTRSSI 199
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
+++ P I + K E + L G +K +L K + + D
Sbjct: 200 YRLLTSRPSTICCTDLKKALEEIKEL-GFQPSKYNFCVALLAKRAV-----TKSQWDAKV 253
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
LKS G +E + P+ + R +KL ++++ G+ L++ P +
Sbjct: 254 DVLKSWGCSEDAVFNAFRKQPNFMLRSPDKLNAVMSFWVEELGWDP----SLLLAEPTLF 309
Query: 255 IKSIQNSLEPR---IKFLVD 271
SIQ L PR +K+L+
Sbjct: 310 GYSIQKRLSPRASIVKYLLS 329
>Medtr2g438020.1 | mTERF protein | LC | chr2:15022188-15025546 |
20130731
Length = 496
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 21/317 (6%)
Query: 13 MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKAN-ENWEYLRSIGIQERKLPSIVSKCPK 71
+++FFK+ F D+ ++ + ++ + + K +++L S G + +V P+
Sbjct: 107 VLYFFKNHSFTDSDLRSIIKRVPWILSCNTHKTILPKFQFLLSKGASTSDIVHMVRGNPR 166
Query: 72 ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
L L L + E + G + S + +P IL S E ++ PL
Sbjct: 167 FLELSLKNHQIKF-EFFLSKGASSSHIVSLLTTYPQILQTSFENRIIPLFKLLTRFFKTN 225
Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLD 191
K ++ + + ++ + ++ ++ G++ D +I ++L P I G K L
Sbjct: 226 KDTIVCLIQHSKWVTSHPHHLIVASINLISDFGVS-DSVIARLLQNKPSIFG---SKDLI 281
Query: 192 PTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA-YLKKCGFQDRQIVDLVVGF 250
+ + +KS+G D + + + ++K L KK G+ D IV+
Sbjct: 282 KSLEEVKSLGF---DPSTASFGVALVAKKGMSKKLWDEKVDTFKKWGWSDENIVEAFRSQ 338
Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRH--------KFL 302
P +++ SI + + + F V+ + E+ +P F + L K++ R K L
Sbjct: 339 PNLMLVSI-DKINLVMSFWVNQLDWNSLELAKFPNMFCYSLHKRIIPRASVWQFLLIKGL 397
Query: 303 KQRNLSCSLSEMLDCNE 319
+Q+N SL C+E
Sbjct: 398 RQKN--ASLVTPFTCSE 412
>Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 |
20130731
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQEKAN-ENWEYLRSIGIQERKLPSIVSKCPKILA 74
FFK GF D+ IQ + RK L V + K +++L S G + + + V++ P L
Sbjct: 83 FFKTHGFSDHQIQTIIRKIPLLIVYNPIKTILPKFQFLASKGASPKDIVATVTRSPNFLC 142
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
L++ I+P E +++ H+ +++ P S + + P L F GV I
Sbjct: 143 SSLDKNIIPSFELVRSFCPSDHKAITSVIICP---SSICDSRFKPNLQFLLDFGVTRSSI 199
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
+++ P I + K E + L G +K +L K + + D
Sbjct: 200 YRLLTSRPSTICCTDLKKALEEIKEL-GFQPSKYNFCVALLAKRAV-----TKSQWDAKV 253
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
LKS G +E + P+ + R +KL ++++ G+ L++ P +
Sbjct: 254 DVLKSWGCSEDAVFNAFRKQPNFMLRSPDKLNAVMSFWVEELGWDP----SLLLAEPTLF 309
Query: 255 IKSIQNSLEPR---IKFLVD 271
SIQ L PR +K+L+
Sbjct: 310 GYSIQKRLSPRASIVKYLLS 329
>Medtr8g012210.1 | transcription termination factor family protein |
HC | chr8:3415478-3414019 | 20130731
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 21 GFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEK 80
G D+ + +F +C L + L +G+ +L I++ P+ LN
Sbjct: 63 GCGDDDLTRIFTRCPSLRNADPSQVQSKLRLLSDLGLGSAELVKIINCRPRFFRTRLNHN 122
Query: 81 IVPMVECLKTLGTKPHEVASAIAKFPHIL---SHSVEEKLCPLLAFFQALGVPEKQIGKM 137
++ L ++ + AIA+ P +L S+ +E ++ ++ LGVP++ + +M
Sbjct: 123 FDERLDSLMSVFDSKAMLHKAIARNPSLLCENSYDIER----IVKQYEELGVPKRDLVQM 178
Query: 138 ILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYS-VEKRLDPTSQF 196
++L P +IS + + E +++++ +GL+KD + K +V ++G S VE + F
Sbjct: 179 MILRPTVISRT--SFDDEKMEYISRIGLSKDSKLYKYVVT---LIGISRVETIREKVLNF 233
Query: 197 LKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
K G ++ ++ + P+IL+ ++K+ L + +++ +P +L
Sbjct: 234 TK-YGFSDDEIFCLFGKSPNILTLSIDKVQRNMTFILGTMKLE----ANIIFTYPYLLFS 288
Query: 257 SIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFR 288
+++ L+PR+ L+ + + +D + P R
Sbjct: 289 NMETVLKPRV--LLAMKVQNMDSNMKTPSILR 318
>Medtr8g081000.3 | transcription termination factor family protein |
LC | chr8:34984986-34982260 | 20130731
Length = 410
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 30 MFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKI---LALGLNEKIVPMVE 86
MF K K L ++H+ A + + LRS+ + L S + + + NE+ +
Sbjct: 1 MFVKLKSLVLLHKPYAMLSLKLLRSLPLNSNSLHSFLCSFSSLSTPINQSSNEETTFLFN 60
Query: 87 CLKTLGTKPHEVAS-AIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLI 145
L + +K H+ S ++K +L + EK ++ FF+ +G + QI +I +++
Sbjct: 61 LLNS-NSKLHKSESIYVSKL--VLGITSPEKPLSVINFFKQIGFSQTQIHSIIHQRTQVL 117
Query: 146 SYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEK 205
++ + V+ LG + +G L K+P I+ S+ K L P+ + +K EK
Sbjct: 118 FSKVDKTLKPKVELFQQLGF-QGSQLGHFLSKNPNILIASLNKTLVPSVEVIKKFVRNEK 176
Query: 206 DLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
DL V IL + +L V N A+L+ CG Q++ ++ + ILI+
Sbjct: 177 DLNRVLYKCGWILPQ--YRLFVANIAFLESCGIVGNQVLIILKCYSRILIE 225
>Medtr8g081000.2 | transcription termination factor family protein |
LC | chr8:34984986-34982125 | 20130731
Length = 400
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 30 MFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKI---LALGLNEKIVPMVE 86
MF K K L ++H+ A + + LRS+ + L S + + + NE+ +
Sbjct: 1 MFVKLKSLVLLHKPYAMLSLKLLRSLPLNSNSLHSFLCSFSSLSTPINQSSNEETTFLFN 60
Query: 87 CLKTLGTKPHEVAS-AIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLI 145
L + +K H+ S ++K +L + EK ++ FF+ +G + QI +I +++
Sbjct: 61 LLNS-NSKLHKSESIYVSKL--VLGITSPEKPLSVINFFKQIGFSQTQIHSIIHQRTQVL 117
Query: 146 SYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEK 205
++ + V+ LG + +G L K+P I+ S+ K L P+ + +K EK
Sbjct: 118 FSKVDKTLKPKVELFQQLGF-QGSQLGHFLSKNPNILIASLNKTLVPSVEVIKKFVRNEK 176
Query: 206 DLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
DL V IL + +L V N A+L+ CG Q++ ++ + ILI+
Sbjct: 177 DLNRVLYKCGWILPQ--YRLFVANIAFLESCGIVGNQVLIILKCYSRILIE 225
>Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 |
20130731
Length = 417
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 68 KCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQAL 127
K K L + K ++ K G ++ + I + P +LS + + P F A
Sbjct: 52 KASKPLYFKTSLKPDSVLNFFKNYGFNDSDIHNIIKREPWLLSCDTHKTILPKFQFLLAK 111
Query: 128 GVPEKQIGKMILLNPRLISYSIETKMAEIV-DFLAGLGLNKDGMIGKVLVKDPYIMGYSV 186
G + I +M+++NP+ + S+ K EI+ F G + ++ +L +P I+ S+
Sbjct: 112 GASQSDIVRMVVVNPKFVKSSL--KNHEIMFHFFLSKGASSSEIVS-LLTSNPIILHISL 168
Query: 187 EKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDL 246
EKR+ P + L KD+ + + + S + L++ N + G D I L
Sbjct: 169 EKRIIPLFELLSKFLKTNKDIIICLIRHSTAFSMNSYHLIMDNVNLMSDFGVSDNVIASL 228
Query: 247 VVGFPPI-----LIKSIQ 259
+ P I LIKS++
Sbjct: 229 LQSRPSIVGSKELIKSLE 246
>Medtr8g081000.1 | transcription termination factor family protein |
LC | chr8:34984986-34983259 | 20130731
Length = 391
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 30 MFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKI---LALGLNEKIVPMVE 86
MF K K L ++H+ A + + LRS+ + L S + + + NE+ +
Sbjct: 1 MFVKLKSLVLLHKPYAMLSLKLLRSLPLNSNSLHSFLCSFSSLSTPINQSSNEETTFLFN 60
Query: 87 CLKTLGTKPHEVAS-AIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLI 145
L + +K H+ S ++K +L + EK ++ FF+ +G + QI +I +++
Sbjct: 61 LLNS-NSKLHKSESIYVSKL--VLGITSPEKPLSVINFFKQIGFSQTQIHSIIHQRTQVL 117
Query: 146 SYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEK 205
++ + V+ LG + +G L K+P I+ S+ K L P+ + +K EK
Sbjct: 118 FSKVDKTLKPKVELFQQLGF-QGSQLGHFLSKNPNILIASLNKTLVPSVEVIKKFVRNEK 176
Query: 206 DLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
DL V IL + +L V N A+L+ CG Q++ ++ + ILI+
Sbjct: 177 DLNRVLYKCGWILPQ--YRLFVANIAFLESCGIVGNQVLIILKCYSRILIE 225
>Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 |
20130731
Length = 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 19/261 (7%)
Query: 16 FFKDRGFDDNSIQGMFRKCKRLEVVHQEKAN-ENWEYLRSIGIQERKLPSIVSKCPKILA 74
FFK GF + IQ + R+ + V + K+ ++L S G+ + V++ P+ L
Sbjct: 83 FFKTHGFSIDQIQSIIRRDPLVFVSNPIKSILPKLQFLASKGVSPEHIIVTVARNPRFLR 142
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
+ LN+ I+P E +++ + + FP +S + ++ P L F GV I
Sbjct: 143 VSLNKHIIPTFELVRSFCPSDKKAIDCVIAFPATIS---DGRMKPNLKFLLDTGVTRSSI 199
Query: 135 GKMILLNPRLISYSI-ETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPT 193
+++ P +I S+ T + EI + G + +L K + + D
Sbjct: 200 YRLLTSRPSVIFSSVLRTAVEEIKEL--GFHPSSYNFCVALLAKKAI-----TKSQWDSK 252
Query: 194 SQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPI 253
LKS G +E + P+++ R ++KL ++++ G+ ++ F
Sbjct: 253 VDALKSWGYSEDAILTAFKRGPNLMLRSLDKLNAVMRFWIQQLGWDPLLLLAAPELFG-- 310
Query: 254 LIKSIQNSLEPR---IKFLVD 271
SI+ L PR I++L+
Sbjct: 311 --LSIEKRLSPRASVIRYLLS 329
>Medtr2g437180.1 | mTERF protein | LC | chr2:14546717-14548665 |
20130731
Length = 396
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 122/293 (41%), Gaps = 35/293 (11%)
Query: 20 RGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNE 79
+ F++N Q +F+ E N + ++ + I+ K P +L+L +
Sbjct: 69 KAFNNN--QVLFKSA--------ENPNSVINFFKNRDFSHSDIRIIIRKAPWLLSLQPHN 118
Query: 80 KIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMIL 139
I+P E + G ++ S I + P IL S+E+++ PL + K + +L
Sbjct: 119 IILPKFEFFLSKGATSSDIVSFITENPRILRSSLEKRIIPLFQLLSSFLKTNKDVILCLL 178
Query: 140 LNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGY-----SVEK----RL 190
+ ++++ +A ++ + G++ D +I +L K P I G S+E+
Sbjct: 179 RHSTYVTFNSYHLVAANINLMTDFGVS-DSVIASLLQKRPSIFGSTDLIKSLEEVKCLGF 237
Query: 191 DPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
DP++ + A+K + +R K+ A KK G+ D
Sbjct: 238 DPSTATFGAALFAKKCMSK---------TRWDEKV-----AVFKKWGWSDETFFQAFRLH 283
Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLK 303
P +++ SI+ + + F V+ +G E+ P F + L +++ R L+
Sbjct: 284 PSLMLTSIEK-INFVMHFWVNQLGWDSLELTKCPHMFGYSLHQRIIPRASVLQ 335
>Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 |
20130731
Length = 398
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 11/282 (3%)
Query: 16 FFKDRGFDDNSIQGMF-RKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILA 74
FFK+ GF D+ I+ + R+ L Q++ +++L SIG + +V PK L
Sbjct: 71 FFKNHGFTDSHIRNVIKREPWLLSCDTQKRILPKFQFLLSIGASSSDIVHMVRCNPKFLE 130
Query: 75 LGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQI 134
L L + E + G + S + P IL S+++++ PL + K
Sbjct: 131 LSLKNNQIKF-EYFLSKGASSSHIISLLTSNPQILQSSLDKRIIPLFELLRMFFKTNKDT 189
Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
++ + + ++ + ++ ++ G++ +I ++L P I K L +
Sbjct: 190 IVCLIRHSKWVASYPHHLIVANINLMSDFGVS-HSVIARLLQIKPSIF---CSKDLIKSL 245
Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHA-YLKKCGFQDRQIVDLVVGFPPI 253
+ +K +G + I + ++K L KK G+ D ++ G P +
Sbjct: 246 EEVKGLGFHP---PITTFGAALIAKKGMSKKLWDEKVDVFKKWGWSDEDVIRAFRGRPDL 302
Query: 254 LIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKL 295
L+ SI + + + F V+ +G + P F + L+K++
Sbjct: 303 LLTSI-DKINLVMSFWVNQLGWDSLALAKRPHIFSYSLEKRI 343
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 68 KCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQAL 127
K K L ++K ++ K G + + I + P +LS ++++ P F ++
Sbjct: 52 KASKQLYFKTSQKPDSVLNFFKNHGFTDSHIRNVIKREPWLLSCDTQKRILPKFQFLLSI 111
Query: 128 GVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVE 187
G I M+ NP+ + S++ + FL+ G + +I +L +P I+ S++
Sbjct: 112 GASSSDIVHMVRCNPKFLELSLKNNQIKFEYFLSK-GASSSHIIS-LLTSNPQILQSSLD 169
Query: 188 KRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLV 247
KR+ P + L+ KD V + ++ + L+V N + G I L+
Sbjct: 170 KRIIPLFELLRMFFKTNKDTIVCLIRHSKWVASYPHHLIVANINLMSDFGVSHSVIARLL 229
Query: 248 VGFPPI-----LIKSIQ 259
P I LIKS++
Sbjct: 230 QIKPSIFCSKDLIKSLE 246
>Medtr8g080990.1 | transcription termination factor family protein |
LC | chr8:34980913-34978858 | 20130731
Length = 378
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 120 LLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDP 179
+L +F+ +G + QI +I L+ ++ + V+F LG + + + K+P
Sbjct: 79 VLNYFKQVGFSQAQIHSIIRQRLPLLFSDVDKTLRPKVEFFQQLGF-QGSHLRDFISKNP 137
Query: 180 YIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQ 239
I+ S+ K+L P+ + +K I EKD V N +L + +L V N A+L+ CG
Sbjct: 138 TILTASLNKKLIPSVEAIKKIAQNEKDFIQVLSNCGWLLPK--YQLFVANIAFLESCGVV 195
Query: 240 DRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKK 294
Q++ L+ I Q+ ++ + VD+ Q ++ + F HGL K
Sbjct: 196 GDQVLFLLKRKSRFFIVP-QSRIKNYVSQAVDLGFPQNSRMLVHALFTIHGLSNK 249