Miyakogusa Predicted Gene

Lj0g3v0223509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223509.1 Non Characterized Hit- tr|D8RUP9|D8RUP9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.86,1e-17,seg,NULL,CUFF.14532.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084660.2 | P-loop nucleoside triphosphate hydrolase super...   159   4e-40
Medtr4g084660.1 | P-loop nucleoside triphosphate hydrolase super...   123   3e-29

>Medtr4g084660.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:32997024-32980105 |
           20130731
          Length = 950

 Score =  159 bits (403), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 88/109 (80%)

Query: 1   MLKLDGSYTTKSYLEIVLERLPAIERNSGGIHSQQSAKLQEIVEFIQXXXXXXXXXXXXX 60
           MLKLDGSYTTKSYLEIVLERLP IER+SGGI+ QQS +L EIV+FIQ             
Sbjct: 842 MLKLDGSYTTKSYLEIVLERLPTIERSSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSS 901

Query: 61  XXXXPIEGVIEEMQSRIRRLEKWLAINTVLWTFLMSALVGYSLYQRRRQ 109
               PIEG+IEEMQS+IRRLE+WLAINTVLWTFLMSA+VGYSLYQRRR+
Sbjct: 902 RVVSPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRR 950


>Medtr4g084660.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:32996815-32980368 |
           20130731
          Length = 979

 Score =  123 bits (309), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/94 (65%), Positives = 70/94 (74%)

Query: 1   MLKLDGSYTTKSYLEIVLERLPAIERNSGGIHSQQSAKLQEIVEFIQXXXXXXXXXXXXX 60
           MLKLDGSYTTKSYLEIVLERLP IER+SGGI+ QQS +L EIV+FIQ             
Sbjct: 842 MLKLDGSYTTKSYLEIVLERLPTIERSSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSS 901

Query: 61  XXXXPIEGVIEEMQSRIRRLEKWLAINTVLWTFL 94
               PIEG+IEEMQS+IRRLE+WLAINT+L   L
Sbjct: 902 RVVSPIEGIIEEMQSKIRRLERWLAINTLLLAIL 935