Miyakogusa Predicted Gene

Lj0g3v0223399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223399.1 Non Characterized Hit- tr|I1M0E1|I1M0E1_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,74.83,0,OXA1,NULL;
OXA1,Membrane insertase OXA1/ALB3/YidC; seg,NULL; yidC_oxa1_cterm:
membrane protein inser,CUFF.14567.1
         (426 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g089105.1 | 60 kDa inner membrane protein | HC | chr4:3573...   468   e-132
Medtr4g107330.1 | 60 kDa inner membrane protein | HC | chr4:4435...   458   e-129
Medtr4g063705.1 | 60 kDa inner membrane protein | HC | chr4:2358...    52   1e-06

>Medtr4g089105.1 | 60 kDa inner membrane protein | HC |
           chr4:35733521-35740788 | 20130731
          Length = 425

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/433 (55%), Positives = 292/433 (67%), Gaps = 15/433 (3%)

Query: 1   MAYRRCLLTRGNLINRSCHPSFSYVLHSNEGKQQDEKPSPTNVGN-FIQTRSFGNYLNG- 58
           MAYRRCLL RG LI+R  HPSF+Y+LH+++  + DEK S T   N   Q+RSF   LNG 
Sbjct: 1   MAYRRCLLQRGKLIDRRSHPSFTYLLHTDDETKPDEKRSSTGFSNNSTQSRSFRTSLNGG 60

Query: 59  STGFLAAAA----SPYAGYNLCRYMSTVNQGSNEIGVMSDVADVLTDATVEGVASQXXXX 114
           S GF +++     SP+AGYN CR MS ++Q S++I V++DVADV + A   GV+      
Sbjct: 61  SIGFFSSSQHKHLSPFAGYNYCRNMSIMDQSSDKITVITDVADVTSQAAT-GVSE----- 114

Query: 115 XXXXXXXXDSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSK 174
                   DS+LPVQ LQYVIDAVH YTGL+WWAAI LTTLVIR+AT PLL+NQLKATSK
Sbjct: 115 --VAIAAADSYLPVQALQYVIDAVHLYTGLDWWAAIALTTLVIRTATVPLLVNQLKATSK 172

Query: 175 LTIMRPHLEEIKQQMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXXXXXXX 234
           LT+MRP LE+IK++M+GKT DP A+A+GQ++M KLFK+YGV+PFTPLK            
Sbjct: 173 LTLMRPRLEQIKEEMDGKTSDPAAVAQGQERMSKLFKEYGVTPFTPLKGLFIQGPVFISF 232

Query: 235 XLAISNMAEKMPSFKHGGASWFTDLTTPDTLYILPALTALSFLVTVECNMQEGMEGNPVA 294
            LAI+NMAEKMPSFKHGGA WFTDLTTPD LYI P LTALSFL+ VE NMQEGMEGNP+ 
Sbjct: 233 FLAITNMAEKMPSFKHGGAFWFTDLTTPDALYIFPVLTALSFLIVVETNMQEGMEGNPMG 292

Query: 295 STMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGVPEXXXX 354
           +TMK  SR +A+L+VP T+ FPKAIFCYWITSNLFSL+YG+VL+ PGVKK LG+P+    
Sbjct: 293 NTMKKFSRVLALLSVPFTLSFPKAIFCYWITSNLFSLTYGMVLRTPGVKKTLGIPDLPPA 352

Query: 355 XXXXXXXXXXXXXXXLK-KATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLRS 413
                          LK +   ++                               QR+RS
Sbjct: 353 EPTSSRQSPFSIFPALKQRKDQSSLPIESPKQIKNQSSLPVETPKQPNKKISSISQRIRS 412

Query: 414 LEKQVKGRKKSKK 426
           LEK VKGRK SKK
Sbjct: 413 LEKHVKGRKISKK 425


>Medtr4g107330.1 | 60 kDa inner membrane protein | HC |
           chr4:44358806-44365844 | 20130731
          Length = 446

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/361 (63%), Positives = 277/361 (76%), Gaps = 13/361 (3%)

Query: 1   MAYRRCLLTRG-NLINRSCHPSFSYVLHSN-EGKQQDEKPSPTNVGN-FIQTRSFG--NY 55
           MAYRRCLL RG NLI+R C+PSF+Y+LHS+ EGKQ+D+  S   + N F QTRSFG  N 
Sbjct: 1   MAYRRCLLQRGKNLIDRRCNPSFTYILHSDDEGKQRDQPDSAGRISNSFTQTRSFGFGNS 60

Query: 56  LNGSTGFLAAAASPYA-GY--NLCRYMSTV-NQGSNEIG-VMSDVADVLTDATVEGVASQ 110
           LNGS GF  + +SP+A GY  N CR MST  +QG ++I  + +DVA VL+D  V+ ++SQ
Sbjct: 61  LNGSMGF--SPSSPFAAGYYNNFCRNMSTTPDQGFDKITELTTDVAHVLSDTAVDAISSQ 118

Query: 111 XX-XXXXXXXXXXDSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQL 169
                        DSFLPVQ+LQY IDAVH+YTGLNWW+AIV+TTL+IR AT PLLINQL
Sbjct: 119 AAPVVSEVAIAAADSFLPVQVLQYAIDAVHTYTGLNWWSAIVVTTLLIRIATVPLLINQL 178

Query: 170 KATSKLTIMRPHLEEIKQQMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXX 229
           K TSKLTIMRP LEE+K +M+GKT DP+A+AEGQ++M++LFK+YGV+PF+PLK       
Sbjct: 179 KTTSKLTIMRPRLEELKAEMDGKTFDPQAVAEGQEKMKQLFKEYGVTPFSPLKGLLIQGP 238

Query: 230 XXXXXXLAISNMAEKMPSFKHGGASWFTDLTTPDTLYILPALTALSFLVTVECNMQEGME 289
                 LAI+NMAEKMPSFKHGGA WFTDLTTPD LY+ P LTALSFLV VE NMQEGME
Sbjct: 239 VFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYVFPVLTALSFLVVVEFNMQEGME 298

Query: 290 GNPVASTMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGVP 349
           GNP+  TMK  SR +A L+VP TM FPKA+FCYW+TSNLFS +YG+VLK PGVKK LGVP
Sbjct: 299 GNPMGDTMKKFSRVLAFLSVPFTMSFPKALFCYWLTSNLFSFTYGMVLKVPGVKKTLGVP 358

Query: 350 E 350
           +
Sbjct: 359 D 359


>Medtr4g063705.1 | 60 kDa inner membrane protein | HC |
           chr4:23583081-23577537 | 20130731
          Length = 444

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 37/245 (15%)

Query: 128 VQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSKLTIMRPHLEEIKQ 187
           ++IL+  + AVH     ++  AI+L TL++++AT PL   Q+++T  +  ++P ++ I+Q
Sbjct: 104 LKILKDGLSAVH--VPYSYGFAIILLTLIVKAATLPLTKQQVESTLAMQNLQPKIKAIQQ 161

Query: 188 QMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXXXXXXXXLAISNMAEK--- 244
           +     G+ E I   Q +  +L+ + GV+P                   A+SN+A +   
Sbjct: 162 RY---AGNQERI---QLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL 215

Query: 245 ------MPSF----------KHGGASW---FTDLTTPDTLY------ILPALTALSFLVT 279
                 +PS              G SW   F D   P   Y      +LP L  LS  V+
Sbjct: 216 TEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLILSQYVS 275

Query: 280 VECNMQEGMEGNPVASTMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKA 339
           +E  M+     +P       + + + ++    ++  P  +  YW T+N+ S +  + L+ 
Sbjct: 276 MEI-MKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQIWLRK 334

Query: 340 PGVKK 344
            G  K
Sbjct: 335 LGGAK 339