Miyakogusa Predicted Gene

Lj0g3v0223169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223169.1 Non Characterized Hit- tr|I1JCY5|I1JCY5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50.45,1e-17,seg,NULL,CUFF.14486.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g026520.1 | transmembrane protein, putative | HC | chr7:88...    50   6e-07

>Medtr7g026520.1 | transmembrane protein, putative | HC |
           chr7:8800563-8794554 | 20130731
          Length = 554

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 67  KPCLTVEEMGKDFRRG-VGKESLRVRTIIQKHFVANG 102
           + C TVEEMGKDF  G V KE LRVR +I++HFV NG
Sbjct: 77  RSCATVEEMGKDFENGFVVKEMLRVRRVIEQHFVLNG 113