Miyakogusa Predicted Gene

Lj0g3v0222379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0222379.1 Non Characterized Hit- tr|I1N0C9|I1N0C9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,34.69,4e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
seg,NULL,CUFF.14467.1
         (410 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g086980.1 | hypothetical protein | HC | chr8:36070849-3607...    77   4e-14
Medtr7g035425.1 | hypothetical protein | LC | chr7:13568021-1356...    62   8e-10
Medtr8g019070.1 | hypothetical protein | LC | chr8:6640118-66378...    55   2e-07
Medtr2g077640.1 | hypothetical protein | LC | chr2:32275446-3227...    52   9e-07

>Medtr8g086980.1 | hypothetical protein | HC |
           chr8:36070849-36073169 | 20130731
          Length = 413

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 1/106 (0%)

Query: 236 EADGFNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSEHDDVVR 295
           +  GF         I  IIR+ F E  PSWKKI    RD+WF  FK +F++    D   R
Sbjct: 262 DGQGFLPSHPAANGIGDIIRTNFTELWPSWKKIHVDTRDLWFAEFKKQFSFCPPDDVWAR 321

Query: 296 RNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAYWESSSF 341
           +NFE+RG+  +   +  VR  ++ RP WI+   W+    +W +  F
Sbjct: 322 KNFERRGATVLKNNLNKVRSQMN-RPTWIRPALWSTFCDHWGTREF 366


>Medtr7g035425.1 | hypothetical protein | LC |
           chr7:13568021-13569614 | 20130731
          Length = 340

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 245 LVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTWPSEHDDVVRRNFEKRGSV 304
            V + I   I++ F +    WK      + + F+ F++K  W S HD  V++NF  R   
Sbjct: 215 FVAKYIRLAIQTNFKQF---WKTYKAVDKKLIFEWFQTKCVWKSPHDAHVKKNFHYRARH 271

Query: 305 KMTQLMQDVR----KNLDKRPNWIKEPEWTQMKAYWES-SSFKEKSEINKRNHAALAGAS 359
           +   +M  VR    ++ +  P WI    W ++  +W +  +F ++S+I K N  +  G  
Sbjct: 272 RFQDMMSTVRAKHARDPEWVPGWIGVNIWPRLLEHWATDPTFLKRSQIEKFNRVSEKGGC 331

Query: 360 LHTGGSV 366
           LH+GGS 
Sbjct: 332 LHSGGSA 338


>Medtr8g019070.1 | hypothetical protein | LC | chr8:6640118-6637865
           | 20130731
          Length = 207

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 33/47 (70%)

Query: 240 FNEHRLVIRTIAAIIRSKFDEAQPSWKKISKGHRDMWFDMFKSKFTW 286
           F+  +LV++ IA IIR + +E +PSWK++S  H+D +FD F   FTW
Sbjct: 26  FDHRKLVVKEIAHIIRYQLEEGKPSWKQLSGKHQDDFFDSFMKTFTW 72


>Medtr2g077640.1 | hypothetical protein | LC |
           chr2:32275446-32272570 | 20130731
          Length = 261

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 281 KSKFTWPSEHDDVVRRNFEKRGSVKMTQLMQDVRKNLDKRPNWIKEPEWTQMKAY----- 335
           ++K  W S +D  V++NF  R   +++ +M  +R+   K+P WI  P+W  +  +     
Sbjct: 34  QTKCVWESHYDAQVKKNFHYRAQHRLSYMMSTLRRKHVKKPEWI--PKWIGVDGWPRLLD 91

Query: 336 -WESS-SFKEKSEINKRNHAALAGASLHTGGS 365
            W +  +F++ S+I K N A+  G  L +GGS
Sbjct: 92  HWATDPTFQKHSQIGKVNRASEKGGCLQSGGS 123