Miyakogusa Predicted Gene

Lj0g3v0221439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0221439.1 Non Characterized Hit- tr|I3T192|I3T192_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF1264,Protein of unknown
function DUF1264,gene.g17213.t1.1
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g084870.1 | lipoprotein | HC | chr3:38338836-38338039 | 20...   318   1e-87
Medtr2g017440.1 | secreted protein | HC | chr2:5472565-5474095 |...   126   9e-30

>Medtr3g084870.1 | lipoprotein | HC | chr3:38338836-38338039 |
           20130731
          Length = 239

 Score =  318 bits (815), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 146/171 (85%), Positives = 158/171 (92%)

Query: 1   MRQCLIYDSPNKNARLIGLEYIISENLFLTLPDEEKRMWHSHLYEVKSGILFMPKVPGPI 60
           MRQCLIYDSP+KNA+LIGLEYIISENLFLTLPDEEKR+WHSHL+EVKSG LFMP VP PI
Sbjct: 69  MRQCLIYDSPDKNAKLIGLEYIISENLFLTLPDEEKRLWHSHLFEVKSGFLFMPNVPKPI 128

Query: 61  ERQDMETVCKTYGKVYHFWQVDKGDALPLGLPQLMMALTRDGQVYDHLVQSCAERMGVDF 120
           E +DME VCKTYGKVYHFWQVD+GD LPLG+PQLMMALTRDGQ+YDHLVQ C +RMGVDF
Sbjct: 129 EHKDMEKVCKTYGKVYHFWQVDRGDKLPLGIPQLMMALTRDGQLYDHLVQGCVDRMGVDF 188

Query: 121 EKQRKDREYMTGPTHGIHPLANAGGKGLETRLREVELKHDEPPRSATRVFV 171
           EK+RK+REYMTGP HGIHPLAN  GKG+ETRLREVELKHD PP SATRVFV
Sbjct: 189 EKERKNREYMTGPKHGIHPLANGAGKGIETRLREVELKHDSPPPSATRVFV 239


>Medtr2g017440.1 | secreted protein | HC | chr2:5472565-5474095 |
           20130731
          Length = 246

 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 9/167 (5%)

Query: 3   QCLIYDS--PNKNARLIGLEYIISENLFLTLPDEEKRMWHSHLYEVKSGILFMPKVPGPI 60
           QC +YDS  PNK  RLIG+EYIIS+++F TLP EE+++WHSH YE+KSG+   P+VP  I
Sbjct: 80  QCAVYDSDDPNK-GRLIGVEYIISDDIFETLPPEEQKLWHSHAYEIKSGLWVNPRVPEMI 138

Query: 61  ERQDMETVCKTYGKVYHFWQVDKGDALPLGLPQLMMA--LTRDGQVYDHLVQSCAERMGV 118
              ++E++ KTYGK +  WQVD+GD LPLG P LMM+      G V   ++     +  +
Sbjct: 139 GMPELESLAKTYGKFWCTWQVDRGDRLPLGAPALMMSPQAVSPGLVRPDILHERDTKYKI 198

Query: 119 DFEKQRKDREYMTGPTHGIHPLAN---AGGKGLETRLREVELKHDEP 162
             E  +  R  +  P   IHP+A+     GKG      E E+K   P
Sbjct: 199 SSESLKSSRIEIPEP-EMIHPMADYWKQHGKGFVIDFEETEMKKRAP 244