Miyakogusa Predicted Gene

Lj0g3v0221269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0221269.1 Non Characterized Hit- tr|Q5YJP1|Q5YJP1_HYAOR
Putative uncharacterized protein (Fragment)
OS=Hyacint,40.85,3e-16,seg,NULL,CUFF.14347.1
         (439 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC | chr1...   511   e-145
Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC | chr1...   511   e-145
Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC | chr6...   314   1e-85
Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC | chr6...   314   1e-85

>Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC |
           chr1:34396265-34403627 | 20130731
          Length = 821

 Score =  511 bits (1315), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 289/461 (62%), Positives = 322/461 (69%), Gaps = 36/461 (7%)

Query: 1   MSGAPKRPHEETVHPSSKHPHEDSGTYSKLVSSSVSNEYHASYDISQDSRVAKAPRNEFR 60
           MSG PK+ HEE+VHPSSKHPHED+G Y KL  SSVSNEYH SYDI QDSRV K PR    
Sbjct: 1   MSGTPKKSHEESVHPSSKHPHEDAGAYPKLAPSSVSNEYHMSYDIGQDSRVVKVPR---- 56

Query: 61  DADRRSPLHSVYRMXXXXXXXXXXXXXPVGPVNRIESRDSKDSRDLRFENRDPKTEKKEL 120
           D +RRSPLHSVYRM             PVGP  R+ESR+SKDSRD+RFENRD KTEKKE+
Sbjct: 57  DVERRSPLHSVYRMPSSSSDPHAEH--PVGPEKRLESRESKDSRDIRFENRDTKTEKKEM 114

Query: 121 HGEARRDTQTQSAKNEKDVRVEGKGDDNKDARHDRDGHNDSKGDTKTEKDGFNAISS-HL 179
            GE R+D Q  SAK+EKD  VEG+GDDNKD RHDRD HNDSKGDTKTEKD FNA S  HL
Sbjct: 115 FGEVRKDPQ--SAKSEKDAHVEGRGDDNKDVRHDRDSHNDSKGDTKTEKDSFNAASGLHL 172

Query: 180 NWKDSKEYHRGKRYSDAPSGSLDTWHALHGNTQGSLEVGKESSAAEEKDHV-EAHEAVGE 238
           +WK+S++YHR K YSD P  SL+ W    GNTQ SLEVGKESS+AE++++  EA EAVGE
Sbjct: 173 DWKESEKYHRAKIYSDPPGASLEPWPMSRGNTQASLEVGKESSSAEQREYGGEAREAVGE 232

Query: 239 NKVXXXXXXXXXXXXXXXXXAKHRDWGEREKERSDRKNSTQVSNTSGDCKESAKD----- 293
           NK+                  KHRDWGE+EKER DR+N+ QVSNT  D KES  D     
Sbjct: 233 NKIDSKGDDRSKEKDRKRKEVKHRDWGEKEKERIDRRNNIQVSNTGSDWKESVNDRRNNV 292

Query: 294 ---------------DRDVERSEREKKDLPKEKETSKEREKDQMKRESWNATEKEISNNE 338
                          DRDVER EREKKDLPKEKE  KE+EKDQMKRESWN  EK++SNNE
Sbjct: 293 QVSNTIGDGKEPLKQDRDVERWEREKKDLPKEKENLKEKEKDQMKRESWNGAEKDVSNNE 352

Query: 339 KEPADGSVKLPEQETVLPEQKKQKEVDGWKNGXXXXXXXXXXXXXXXXXXXPDKRNRGLD 398
           KEP DGS K+PEQETVLPEQKKQK+VD                         DKR+RG D
Sbjct: 353 KEPVDGSAKVPEQETVLPEQKKQKDVD------REAKDKRKEREADLVGDRSDKRSRGFD 406

Query: 399 KESDDGCADAEGAIEKERDAYNYSGQHRKRIQRSRGSPQVP 439
           KESDDGCAD +GAIEKE + YNYSGQHRKRIQRSRGSPQVP
Sbjct: 407 KESDDGCADGQGAIEKESEVYNYSGQHRKRIQRSRGSPQVP 447


>Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC |
           chr1:34396245-34403627 | 20130731
          Length = 821

 Score =  511 bits (1315), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 289/461 (62%), Positives = 322/461 (69%), Gaps = 36/461 (7%)

Query: 1   MSGAPKRPHEETVHPSSKHPHEDSGTYSKLVSSSVSNEYHASYDISQDSRVAKAPRNEFR 60
           MSG PK+ HEE+VHPSSKHPHED+G Y KL  SSVSNEYH SYDI QDSRV K PR    
Sbjct: 1   MSGTPKKSHEESVHPSSKHPHEDAGAYPKLAPSSVSNEYHMSYDIGQDSRVVKVPR---- 56

Query: 61  DADRRSPLHSVYRMXXXXXXXXXXXXXPVGPVNRIESRDSKDSRDLRFENRDPKTEKKEL 120
           D +RRSPLHSVYRM             PVGP  R+ESR+SKDSRD+RFENRD KTEKKE+
Sbjct: 57  DVERRSPLHSVYRMPSSSSDPHAEH--PVGPEKRLESRESKDSRDIRFENRDTKTEKKEM 114

Query: 121 HGEARRDTQTQSAKNEKDVRVEGKGDDNKDARHDRDGHNDSKGDTKTEKDGFNAISS-HL 179
            GE R+D Q  SAK+EKD  VEG+GDDNKD RHDRD HNDSKGDTKTEKD FNA S  HL
Sbjct: 115 FGEVRKDPQ--SAKSEKDAHVEGRGDDNKDVRHDRDSHNDSKGDTKTEKDSFNAASGLHL 172

Query: 180 NWKDSKEYHRGKRYSDAPSGSLDTWHALHGNTQGSLEVGKESSAAEEKDHV-EAHEAVGE 238
           +WK+S++YHR K YSD P  SL+ W    GNTQ SLEVGKESS+AE++++  EA EAVGE
Sbjct: 173 DWKESEKYHRAKIYSDPPGASLEPWPMSRGNTQASLEVGKESSSAEQREYGGEAREAVGE 232

Query: 239 NKVXXXXXXXXXXXXXXXXXAKHRDWGEREKERSDRKNSTQVSNTSGDCKESAKD----- 293
           NK+                  KHRDWGE+EKER DR+N+ QVSNT  D KES  D     
Sbjct: 233 NKIDSKGDDRSKEKDRKRKEVKHRDWGEKEKERIDRRNNIQVSNTGSDWKESVNDRRNNV 292

Query: 294 ---------------DRDVERSEREKKDLPKEKETSKEREKDQMKRESWNATEKEISNNE 338
                          DRDVER EREKKDLPKEKE  KE+EKDQMKRESWN  EK++SNNE
Sbjct: 293 QVSNTIGDGKEPLKQDRDVERWEREKKDLPKEKENLKEKEKDQMKRESWNGAEKDVSNNE 352

Query: 339 KEPADGSVKLPEQETVLPEQKKQKEVDGWKNGXXXXXXXXXXXXXXXXXXXPDKRNRGLD 398
           KEP DGS K+PEQETVLPEQKKQK+VD                         DKR+RG D
Sbjct: 353 KEPVDGSAKVPEQETVLPEQKKQKDVD------REAKDKRKEREADLVGDRSDKRSRGFD 406

Query: 399 KESDDGCADAEGAIEKERDAYNYSGQHRKRIQRSRGSPQVP 439
           KESDDGCAD +GAIEKE + YNYSGQHRKRIQRSRGSPQVP
Sbjct: 407 KESDDGCADGQGAIEKESEVYNYSGQHRKRIQRSRGSPQVP 447


>Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  314 bits (805), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 200/402 (49%), Positives = 248/402 (61%), Gaps = 40/402 (9%)

Query: 38  EYHASYDISQDSRVAKAPRNEFRDADRRSPLHSVYRMXXXXXXXXXXXXXPVGPVNRIES 97
           ++H   +I QDSRVAK  R E RDADRRSPLHSVYRM             P+G  NRIES
Sbjct: 2   DHHVPREIGQDSRVAKTFRVEGRDADRRSPLHSVYRMPLSSNDSQADH--PIGTGNRIES 59

Query: 98  RDSKDSRDLRFENRDPKTEKKELHGEARRDTQTQSAKNEKDVRVEGKGDD-NKDARHDRD 156
           RD KD+RD+R                           +EKDV +E +GDD NK  RH+RD
Sbjct: 60  RDLKDNRDIR---------------------------SEKDVCLESRGDDSNKGTRHERD 92

Query: 157 GHNDSKGDTKTEKDGFNAISSHLNWKDSKEYHRGKRYSDAPSGSLDTWHALHGNTQGSLE 216
            HND+KGD KT+K  F  +SS LNWKDSK++ RGKRY D+P GSLD+ H  HGNT    E
Sbjct: 93  SHNDTKGDIKTDKVTFGLVSSPLNWKDSKDF-RGKRYGDSPGGSLDSRHMSHGNT--PTE 149

Query: 217 VGKESSAAEEKDHVEAHEAVGENKVXXXXXXXXXXXXXXXXXAKHRDWGEREKERSDRKN 276
           VGKE+   +++D +EAHE VGE+K+                  KH+ WG++EKERSDR+N
Sbjct: 150 VGKENPTTKDRDSLEAHETVGESKIDSKSEDRFKDRKRID--GKHQGWGDKEKERSDRRN 207

Query: 277 STQVSNTSGDCKESAKDDRDVERSEREKKDLPKEKETSKEREKDQMKRESWNATEKEISN 336
           STQV+N  G+ KESAK+D+  E+ E+EKKD+PK +E SKE     MKRESWN  EKE+S 
Sbjct: 208 STQVNNNIGENKESAKEDQAAEKLEKEKKDIPKNREISKE----HMKRESWNGMEKEVSY 263

Query: 337 NEKEPADGSVKLPEQETVLPEQKKQKEVDGWKNGXXXXXXXXXXXXXXXXXXXPDKRNRG 396
           NEKE ADGSVK+P+ ETVLPEQKK K+VD  K                     PDKR + 
Sbjct: 264 NEKEVADGSVKIPKHETVLPEQKKHKDVDSGKTVDGETRDRRKERDNDLEGDRPDKRFKS 323

Query: 397 LDKESDDGCADAEGAIEKERDAYNYSGQHRKRIQRSRGSPQV 438
            +K+S+DG A  E   EKE + ++ + QHRKRIQRSR SP V
Sbjct: 324 -EKQSEDGFAGEEETGEKESEDHSCNVQHRKRIQRSRASPLV 364


>Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  314 bits (805), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 200/402 (49%), Positives = 248/402 (61%), Gaps = 40/402 (9%)

Query: 38  EYHASYDISQDSRVAKAPRNEFRDADRRSPLHSVYRMXXXXXXXXXXXXXPVGPVNRIES 97
           ++H   +I QDSRVAK  R E RDADRRSPLHSVYRM             P+G  NRIES
Sbjct: 2   DHHVPREIGQDSRVAKTFRVEGRDADRRSPLHSVYRMPLSSNDSQADH--PIGTGNRIES 59

Query: 98  RDSKDSRDLRFENRDPKTEKKELHGEARRDTQTQSAKNEKDVRVEGKGDD-NKDARHDRD 156
           RD KD+RD+R                           +EKDV +E +GDD NK  RH+RD
Sbjct: 60  RDLKDNRDIR---------------------------SEKDVCLESRGDDSNKGTRHERD 92

Query: 157 GHNDSKGDTKTEKDGFNAISSHLNWKDSKEYHRGKRYSDAPSGSLDTWHALHGNTQGSLE 216
            HND+KGD KT+K  F  +SS LNWKDSK++ RGKRY D+P GSLD+ H  HGNT    E
Sbjct: 93  SHNDTKGDIKTDKVTFGLVSSPLNWKDSKDF-RGKRYGDSPGGSLDSRHMSHGNT--PTE 149

Query: 217 VGKESSAAEEKDHVEAHEAVGENKVXXXXXXXXXXXXXXXXXAKHRDWGEREKERSDRKN 276
           VGKE+   +++D +EAHE VGE+K+                  KH+ WG++EKERSDR+N
Sbjct: 150 VGKENPTTKDRDSLEAHETVGESKIDSKSEDRFKDRKRID--GKHQGWGDKEKERSDRRN 207

Query: 277 STQVSNTSGDCKESAKDDRDVERSEREKKDLPKEKETSKEREKDQMKRESWNATEKEISN 336
           STQV+N  G+ KESAK+D+  E+ E+EKKD+PK +E SKE     MKRESWN  EKE+S 
Sbjct: 208 STQVNNNIGENKESAKEDQAAEKLEKEKKDIPKNREISKE----HMKRESWNGMEKEVSY 263

Query: 337 NEKEPADGSVKLPEQETVLPEQKKQKEVDGWKNGXXXXXXXXXXXXXXXXXXXPDKRNRG 396
           NEKE ADGSVK+P+ ETVLPEQKK K+VD  K                     PDKR + 
Sbjct: 264 NEKEVADGSVKIPKHETVLPEQKKHKDVDSGKTVDGETRDRRKERDNDLEGDRPDKRFKS 323

Query: 397 LDKESDDGCADAEGAIEKERDAYNYSGQHRKRIQRSRGSPQV 438
            +K+S+DG A  E   EKE + ++ + QHRKRIQRSR SP V
Sbjct: 324 -EKQSEDGFAGEEETGEKESEDHSCNVQHRKRIQRSRASPLV 364