Miyakogusa Predicted Gene
- Lj0g3v0219909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0219909.1 tr|Q2HS37|Q2HS37_MEDTR Nucleic acid binding NABP
OS=Medicago truncatula GN=MTR_2g097670 PE=4 SV=1,77.63,0,PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; NABP,Nucleic
acid binding NABP; P,CUFF.15248.1
(807 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC | chr2:417... 1305 0.0
Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC | chr2:417... 1305 0.0
Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC | chr4:241... 1197 0.0
Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC | chr4:241... 1180 0.0
Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC | chr2:417... 1060 0.0
Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC ... 822 0.0
Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC ... 682 0.0
Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC ... 487 e-137
Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC ... 487 e-137
Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC ... 479 e-135
Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC ... 408 e-113
Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC ... 309 8e-84
Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC ... 178 2e-44
Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC ... 175 2e-43
Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC ... 117 4e-26
Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC ... 117 5e-26
Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC ... 114 5e-25
Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC ... 105 2e-22
Medtr1g100230.1 | pumilio-like protein | LC | chr1:45172367-4517... 93 1e-18
Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484... 70 9e-12
Medtr4g120470.1 | pumilio-like protein | HC | chr4:49940997-4993... 52 3e-06
>Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 1305 bits (3377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/876 (75%), Positives = 708/876 (80%), Gaps = 76/876 (8%)
Query: 1 MRGSASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENV 60
+RGSA EW +KQKSLAEIFQDDMGH T++ GF SRPASRN FDENV
Sbjct: 178 IRGSA--EWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNTFDENV 235
Query: 61 DIMTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALG-SPLSRSTT 119
+I +SAEA+LA L DSSATD LR G+N+QGS A+QN G Q SY+YAAALG S LSRSTT
Sbjct: 236 EITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQVSYSYAAALGGSSLSRSTT 295
Query: 120 PDPQHVARAPSPCLTPIGGGRVAAAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSAD 179
PDPQHVARAPSPC TPIG GRV AAEKRG+ +PD +G+NGSADI ALSGMNLS D
Sbjct: 296 PDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDV----SGINGSADIASALSGMNLSTD 351
Query: 180 DVLDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSG 239
D L+GDNHFPSQVESDV+N++RYLFG+QGGQDHGKQHAYLKK+ESGHM KTA+S SG+
Sbjct: 352 DALEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHSDSGKRS 411
Query: 240 GNGPDINN-SLDRQIELQKSAVSPNNSYFKGS--------------------PTSPFN-- 276
G+G D+ + SLDRQ+E QKSAVSPNN YF GS SPFN
Sbjct: 412 GSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNY 471
Query: 277 --------------------GGGGMPAQYQPLDGTNSSFTNYLP-------LSHG----- 304
G G MP ++ + ++ + + L G
Sbjct: 472 GLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPS 531
Query: 305 ------RMGNQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNL 358
RMGNQI+GGALQ+P+VDPMYLQYMR EY + QLAALNDPSVDRNYLGNSYMNL
Sbjct: 532 DVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNL 591
Query: 359 LELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXX 418
LELQKAYLG+LLSP KSQYNVPLGGKSGGSNHHGYYGNP YGVGLSYPGSPMAN
Sbjct: 592 LELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPTYGVGLSYPGSPMANSLSTSP 651
Query: 419 XXXXXXIRHNDLNMHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELS 478
IRHNDLNMHFASGMRNVAGVM PWHLD+ N+DE+FASSLLEEFKSNKTKCFELS
Sbjct: 652 VGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAVNVDENFASSLLEEFKSNKTKCFELS 711
Query: 479 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 538
EISGHVVEFSADQYGSRFIQQKLETATTEEK MVYQEI PHALALMTDVFGNYVVQKFFE
Sbjct: 712 EISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFE 771
Query: 539 HGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRD 598
HGLASQRRELANKL+ HVLTLSLQMYGCRVIQKAIEVVDLDQKI MVQELDGNIMRCVRD
Sbjct: 772 HGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRD 831
Query: 599 QNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVM 658
QNGNHVIQKCIECVPEDAIDFI+STFFDQVVTLSTHPYGCRVIQRVLEHC++P+TQQKVM
Sbjct: 832 QNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVM 891
Query: 659 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL 718
DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERS IIKELAGNIVQMSQQKFASNVVEKCL
Sbjct: 892 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCL 951
Query: 719 AF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 770
F LVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELILSRIKVH
Sbjct: 952 TFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVH 1011
Query: 771 LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHPT 806
LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPH T
Sbjct: 1012 LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT 1047
>Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 1305 bits (3377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/876 (75%), Positives = 708/876 (80%), Gaps = 76/876 (8%)
Query: 1 MRGSASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENV 60
+RGSA EW +KQKSLAEIFQDDMGH T++ GF SRPASRN FDENV
Sbjct: 178 IRGSA--EWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNTFDENV 235
Query: 61 DIMTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALG-SPLSRSTT 119
+I +SAEA+LA L DSSATD LR G+N+QGS A+QN G Q SY+YAAALG S LSRSTT
Sbjct: 236 EITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQVSYSYAAALGGSSLSRSTT 295
Query: 120 PDPQHVARAPSPCLTPIGGGRVAAAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSAD 179
PDPQHVARAPSPC TPIG GRV AAEKRG+ +PD +G+NGSADI ALSGMNLS D
Sbjct: 296 PDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDV----SGINGSADIASALSGMNLSTD 351
Query: 180 DVLDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSG 239
D L+GDNHFPSQVESDV+N++RYLFG+QGGQDHGKQHAYLKK+ESGHM KTA+S SG+
Sbjct: 352 DALEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHSDSGKRS 411
Query: 240 GNGPDINN-SLDRQIELQKSAVSPNNSYFKGS--------------------PTSPFN-- 276
G+G D+ + SLDRQ+E QKSAVSPNN YF GS SPFN
Sbjct: 412 GSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNY 471
Query: 277 --------------------GGGGMPAQYQPLDGTNSSFTNYLP-------LSHG----- 304
G G MP ++ + ++ + + L G
Sbjct: 472 GLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASPS 531
Query: 305 ------RMGNQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNL 358
RMGNQI+GGALQ+P+VDPMYLQYMR EY + QLAALNDPSVDRNYLGNSYMNL
Sbjct: 532 DVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNL 591
Query: 359 LELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXX 418
LELQKAYLG+LLSP KSQYNVPLGGKSGGSNHHGYYGNP YGVGLSYPGSPMAN
Sbjct: 592 LELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPTYGVGLSYPGSPMANSLSTSP 651
Query: 419 XXXXXXIRHNDLNMHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELS 478
IRHNDLNMHFASGMRNVAGVM PWHLD+ N+DE+FASSLLEEFKSNKTKCFELS
Sbjct: 652 VGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAVNVDENFASSLLEEFKSNKTKCFELS 711
Query: 479 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 538
EISGHVVEFSADQYGSRFIQQKLETATTEEK MVYQEI PHALALMTDVFGNYVVQKFFE
Sbjct: 712 EISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFE 771
Query: 539 HGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRD 598
HGLASQRRELANKL+ HVLTLSLQMYGCRVIQKAIEVVDLDQKI MVQELDGNIMRCVRD
Sbjct: 772 HGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRD 831
Query: 599 QNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVM 658
QNGNHVIQKCIECVPEDAIDFI+STFFDQVVTLSTHPYGCRVIQRVLEHC++P+TQQKVM
Sbjct: 832 QNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVM 891
Query: 659 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL 718
DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERS IIKELAGNIVQMSQQKFASNVVEKCL
Sbjct: 892 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCL 951
Query: 719 AF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 770
F LVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELILSRIKVH
Sbjct: 952 TFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVH 1011
Query: 771 LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHPT 806
LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPH T
Sbjct: 1012 LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT 1047
>Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 954
Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/810 (74%), Positives = 655/810 (80%), Gaps = 51/810 (6%)
Query: 6 SAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMTS 65
SAEW SKQKSLAEIFQDDM T + G SRPASRNAFDENVD + +
Sbjct: 183 SAEWGGDGLIGLPSLGLRSKQKSLAEIFQDDMERNTPVTGLPSRPASRNAFDENVDKVNT 242
Query: 66 AEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALG-SPLSRSTTPDPQH 124
+EA+LA ++QGSSATQN G +SY+YAAALG S LSRSTTPDPQH
Sbjct: 243 SEAELA----------------HVQGSSATQNIGLPASYSYAAALGGSSLSRSTTPDPQH 286
Query: 125 VARAPSPCLTPIGGGRVAAAEKRGMANPDAYN-VSTGLNGSADIVDALSGMNLSADDVLD 183
+ARAPSPCLTPIGGGR A++KRG+ +PD++N VS+G+N SAD+V ALSGMNLSADD
Sbjct: 287 IARAPSPCLTPIGGGRNVASDKRGIVSPDSFNGVSSGMNESADLVAALSGMNLSADD--- 343
Query: 184 GDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGP 243
++H PSQVESDVDNH+RYLFG+QGGQDHGKQH YLKKSESGH+Q +A +
Sbjct: 344 -EDHLPSQVESDVDNHQRYLFGMQGGQDHGKQHPYLKKSESGHLQSSALT---------- 392
Query: 244 DINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLSH 303
+ + S F+ + GM ++ + + + +
Sbjct: 393 --------SLMTNQYGTSNLPPMFENVAAASMMASPGMDSRILGGGLASGAGSPSDLHNL 444
Query: 304 GRMGNQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQK 363
GRMGNQI+GGALQAPFVDPMYLQYMR SEY + QLAALNDPSVDRNYLGNSYMNLLELQK
Sbjct: 445 GRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALNDPSVDRNYLGNSYMNLLELQK 504
Query: 364 AYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXXX 423
AYLG++LSP KSQYN LGGKSG SNHHGYYGNPAYGVGLSYPGSPMAN
Sbjct: 505 AYLGSVLSPQKSQYNAQLGGKSGNSNHHGYYGNPAYGVGLSYPGSPMANSGSPVGSGSP- 563
Query: 424 XIRHNDLN-MHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISG 482
IRHNDLN M FASGMRN+AGVMGPWH+DSGNMDESFASSLLEEFKSNK KCFELSEI+G
Sbjct: 564 -IRHNDLNNMRFASGMRNLAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELSEIAG 622
Query: 483 HVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLA 542
HVVEFSADQYGSRFIQQKLETATTEEK MVYQEIMPHALALMTDVFGNYVVQKFFEHGLA
Sbjct: 623 HVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLA 682
Query: 543 SQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGN 602
QRRELANKL HVLTLSLQMYGCRVIQKAIEVVDLDQKI MV+ELDGNIMRCVRDQNGN
Sbjct: 683 PQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRDQNGN 742
Query: 603 HVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEIL 662
HVIQKCIECVPE+AIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHC+ P TQQKVMDEIL
Sbjct: 743 HVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEIL 802
Query: 663 GAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF-- 720
GAVSMLAQDQYGNYVVQHVLEHGKPHERS IIKELAG IVQMSQQKFASNVVEKCL F
Sbjct: 803 GAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFSG 862
Query: 721 ------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNAL 774
LV+EMLG+TDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNAL
Sbjct: 863 PAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNAL 922
Query: 775 KKYTYGKHIVARVEKLVAAGERRIAAQSPH 804
KKYTYGKHIVARVEKLVAAGERR+AAQ+P
Sbjct: 923 KKYTYGKHIVARVEKLVAAGERRMAAQTPQ 952
>Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 1025
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/874 (71%), Positives = 667/874 (76%), Gaps = 106/874 (12%)
Query: 5 ASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMT 64
SAEW SKQKSLAEIFQDDM T + G SRPASRNAFDENVD +
Sbjct: 182 GSAEWGGDGLIGLPSLGLRSKQKSLAEIFQDDMERNTPVTGLPSRPASRNAFDENVDKVN 241
Query: 65 SAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALG-SPLSRSTTPDPQ 123
++EA+LA ++QGSSATQN G +SY+YAAALG S LSRSTTPDPQ
Sbjct: 242 TSEAELA----------------HVQGSSATQNIGLPASYSYAAALGGSSLSRSTTPDPQ 285
Query: 124 HVARAPSPCLTPIGGGRVAAAEKRGMANPDAYN-VSTGLNGSADIVDALSGMNLSADDVL 182
H+ARAPSPCLTPIGGGR A++KRG+ +PD++N VS+G+N SAD+V ALSGMNLSADD
Sbjct: 286 HIARAPSPCLTPIGGGRNVASDKRGIVSPDSFNGVSSGMNESADLVAALSGMNLSADD-- 343
Query: 183 DGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNG 242
++H PSQVESDVDNH+RYLFG+QGGQDHGKQH YLKKSESGH+Q SG RS
Sbjct: 344 --EDHLPSQVESDVDNHQRYLFGMQGGQDHGKQHPYLKKSESGHLQS---SGKSRS---- 394
Query: 243 PDINN-SLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPL 301
++NN SL RQ ELQ S NNSYFKGSPTS F+GGG M AQYQ +DG NSSFTNY
Sbjct: 395 -ELNNLSLHRQAELQNSTAPLNNSYFKGSPTSHFSGGGNMQAQYQSIDGMNSSFTNYGLS 453
Query: 302 SHGRMGNQISGGALQ-----APFVDPMYLQYMRASEYGSP-------------------- 336
+G GN + +L + PM+ AS SP
Sbjct: 454 GYG--GNPAALTSLMTNQYGTSNLPPMFENVAAASMMASPGMDSRILGGGLASGAGSPSD 511
Query: 337 ---------QLA--ALNDPSVD--------------------------RNYLGNSYMNLL 359
Q+A AL P VD RNYLGNSYMNLL
Sbjct: 512 LHNLGRMGNQIAGGALQAPFVDPMYLQYMRTSEYAAAQLAALNDPSVDRNYLGNSYMNLL 571
Query: 360 ELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXX 419
ELQKAYLG++LSP KSQYN LGGKSG SNHHGYYGNPAYGVGLSYPGSPMAN
Sbjct: 572 ELQKAYLGSVLSPQKSQYNAQLGGKSGNSNHHGYYGNPAYGVGLSYPGSPMAN--SGSPV 629
Query: 420 XXXXXIRHNDL-NMHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELS 478
IRHNDL NM FASGMRN+AGVMGPWH+DSGNMDESFASSLLEEFKSNK KCFELS
Sbjct: 630 GSGSPIRHNDLNNMRFASGMRNLAGVMGPWHVDSGNMDESFASSLLEEFKSNKAKCFELS 689
Query: 479 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 538
EI+GHVVEFSADQYGSRFIQQKLETATTEEK MVYQEIMPHALALMTDVFGNYVVQKFFE
Sbjct: 690 EIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFE 749
Query: 539 HGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRD 598
HGLA QRRELANKL HVLTLSLQMYGCRVIQKAIEVVDLDQKI MV+ELDGNIMRCVRD
Sbjct: 750 HGLAPQRRELANKLIGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVKELDGNIMRCVRD 809
Query: 599 QNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVM 658
QNGNHVIQKCIECVPE+AIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHC+ P TQQKVM
Sbjct: 810 QNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVM 869
Query: 659 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL 718
DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERS IIKELAG IVQMSQQKFASNVVEKCL
Sbjct: 870 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCL 929
Query: 719 AF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 770
F LV+EMLG+TDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH
Sbjct: 930 TFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 989
Query: 771 LNALKKYTYGKHIVARVEKLVAAGERRIAAQSPH 804
LNALKKYTYGKHIVARVEKLVAAGERR+AAQ+P
Sbjct: 990 LNALKKYTYGKHIVARVEKLVAAGERRMAAQTPQ 1023
>Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 917
Score = 1060 bits (2742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/742 (72%), Positives = 585/742 (78%), Gaps = 70/742 (9%)
Query: 1 MRGSASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENV 60
+RGSA EW +KQKSLAEIFQDDMGH T++ GF SRPASRN FDENV
Sbjct: 178 IRGSA--EWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNTFDENV 235
Query: 61 DIMTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALG-SPLSRSTT 119
+I +SAEA+LA L DSSATD LR G+N+QGS A+QN G Q SY+YAAALG S LSRSTT
Sbjct: 236 EITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQVSYSYAAALGGSSLSRSTT 295
Query: 120 PDPQHVARAPSPCLTPIGGGRVAAAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSAD 179
PDPQHVARAPSPC TPIG GRV AAEKRG+ +PD +G+NGSADI ALSGMNLS D
Sbjct: 296 PDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDV----SGINGSADIASALSGMNLSTD 351
Query: 180 DVLDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSG 239
D L+GDNHFPSQVESDV+N++RYLFG+QGGQDHGKQHAYLKK+ESGHM KTA+S SG+
Sbjct: 352 DALEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHSDSGKRS 411
Query: 240 GNGPDINN-SLDRQIELQKSAVSPNNSYFK---------------------GSPTSPFN- 276
G+G D+ + SLDRQ+E QKSAVSPNN YF GS SPFN
Sbjct: 412 GSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGS-NSPFNN 470
Query: 277 ---------------------GGGGMPAQYQPLDGTNSSFTNYLP-------LSHG---- 304
G G MP ++ + ++ + + L G
Sbjct: 471 YGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMVSPGMDSRILGGGLPSGVASP 530
Query: 305 -------RMGNQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMN 357
RMGNQI+GGALQ+P+VDPMYLQYMR EY + QLAALNDPSVDRNYLGNSYMN
Sbjct: 531 SDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMN 590
Query: 358 LLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXX 417
LLELQKAYLG+LLSP KSQYNVPLGGKSGGSNHHGYYGNP YGVGLSYPGSPMAN
Sbjct: 591 LLELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPTYGVGLSYPGSPMANSLSTS 650
Query: 418 XXXXXXXIRHNDLNMHFASGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFEL 477
IRHNDLNMHFASGMRNVAGVM PWHLD+ N+DE+FASSLLEEFKSNKTKCFEL
Sbjct: 651 PVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAVNVDENFASSLLEEFKSNKTKCFEL 710
Query: 478 SEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFF 537
SEISGHVVEFSADQYGSRFIQQKLETATTEEK MVYQEI PHALALMTDVFGNYVVQKFF
Sbjct: 711 SEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFF 770
Query: 538 EHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVR 597
EHGLASQRRELANKL+ HVLTLSLQMYGCRVIQKAIEVVDLDQKI MVQELDGNIMRCVR
Sbjct: 771 EHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVR 830
Query: 598 DQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKV 657
DQNGNHVIQKCIECVPEDAIDFI+STFFDQVVTLSTHPYGCRVIQRVLEHC++P+TQQKV
Sbjct: 831 DQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKV 890
Query: 658 MDEILGAVSMLAQDQYGNYVVQ 679
MDEILGAVSMLAQDQYGNYVVQ
Sbjct: 891 MDEILGAVSMLAQDQYGNYVVQ 912
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 550 NKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCI 609
+++ HV+ S YG R IQ+ +E ++K + QE+ + + + D GN+V+QK
Sbjct: 711 SEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFF 770
Query: 610 ECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLA 669
E + + + V+TLS YGCRVIQ+ +E D + + K++ E+ G +
Sbjct: 771 EHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIE-VVDLDQKIKMVQELDGNIMRCV 829
Query: 670 QDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF--------- 720
+DQ GN+V+Q +E II +V +S + V+++ L
Sbjct: 830 RDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQK 889
Query: 721 LVNEMLGSTDENEPLQAMMKDQFANYVVQ 749
+++E+LG+ + + +DQ+ NYVVQ
Sbjct: 890 VMDEILGA------VSMLAQDQYGNYVVQ 912
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 619 FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK--VMDEILGAVSMLAQDQYGNY 676
F +S VV S YG R IQ+ LE T++K V EI L D +GNY
Sbjct: 708 FELSEISGHVVEFSADQYGSRFIQQKLETA---TTEEKNMVYQEITPHALALMTDVFGNY 764
Query: 677 VVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFL----VNEMLGSTDEN 732
VVQ EHG +R + +L G+++ +S Q + V++K + + +M+ D N
Sbjct: 765 VVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGN 824
Query: 733 EPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARV 787
+ ++DQ N+V+QK +E + + I+S + L + YG ++ RV
Sbjct: 825 --IMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRV 877
>Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC |
chr5:34410395-34418672 | 20130731
Length = 1012
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/856 (54%), Positives = 561/856 (65%), Gaps = 127/856 (14%)
Query: 24 SKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMTSAEADLADLCRDSSATDAL 83
S+Q+S+AEIFQD+M + + RN FD DI E A L +D + L
Sbjct: 192 SRQRSIAEIFQDEMNSAASASKHPHHLPGRNVFD---DIAEKPENHFAYLHQD---LEDL 245
Query: 84 RSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVAA 143
+SG NL G +S +YA+ALGS LSRS TPD Q V R SP + PIG GR A
Sbjct: 246 QSGGNLDG---------LASQSYASALGSSLSRSGTPDAQFVPRVSSPSIPPIGEGRSNA 296
Query: 144 AEKRGMANPDAYN-VSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRY 202
A+KR +++N VS+ LN AD+V AL+GMNLS +D +D + PS +
Sbjct: 297 ADKRSFNGQNSFNGVSSNLNEPADLVSALAGMNLSQNDAIDDEKRPPSDYTHN------- 349
Query: 203 LFGLQGGQDHGKQHAYLKKSES----GHMQKTAYSGSGRSGGN-GPDINNSL---DRQIE 254
KQ+ YL KS+S H Y + +S + G D+N+S+ Q+E
Sbjct: 350 ----------AKQYQYLNKSDSLPYLRHSVNNPYLKASKSSASFGLDMNDSMLYATEQLE 399
Query: 255 LQKSAVSPNNSY-----------------------------------FKGSPTSPF---- 275
+K+ +NS+ F +P+SP
Sbjct: 400 SRKAGGYSDNSHFKGSTPTFTGRGGSPAHYQNVDDTHISHANYNMAGFAVNPSSPPMMGS 459
Query: 276 -NGGGGMPAQYQ------PLDGTNSSFT-------NYLPL-------SHGRMGNQISGGA 314
+G +P ++ PL G N+ + N PL + R+GN +G
Sbjct: 460 PHGSANLPHFFEHAAPSSPL-GMNAMDSRGLARGANLGPLLAASELQNASRLGNHAAGST 518
Query: 315 LQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQKAYLGNLLSPHK 374
Q P +DP+YLQY+R+ E + Q RN NS +LL LQKAY+ +L++ K
Sbjct: 519 HQLPLIDPLYLQYLRSGEVAAAQ----------RN---NSITDLLGLQKAYIESLIAQQK 565
Query: 375 SQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMA-NXXXXXXXXXXXXIRHNDLNMH 433
+Q++VP GKS NH+ Y GNP+YG G+SYPGSP+A + + ++ NM
Sbjct: 566 AQFSVPYLGKSASMNHNSY-GNPSYGHGMSYPGSPLAGSPFPSSMYGPGSPMSQSERNMR 624
Query: 434 FASGMRNVAGVM-GPWHLDS-GNMDESFASSLLEEFKSNKTKCFELSEISGHVVEFSADQ 491
A+GMRNVAGV G WH D+ ++DE+F SSLL+EFKSNKTKCFELSEI+GHVVEFSADQ
Sbjct: 625 LAAGMRNVAGVFTGAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQ 684
Query: 492 YGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANK 551
YGSRFIQQKLETA+ EEKTMV+ EIMP AL LMTDVFGNYVVQKFFEHG A Q RELA++
Sbjct: 685 YGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAEQIRELADQ 744
Query: 552 LFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIEC 611
L HVLTLSLQMYGCRVIQKAIEVV+LDQK MV ELDG+IMRCVRDQNGNHVIQKCIEC
Sbjct: 745 LTGHVLTLSLQMYGCRVIQKAIEVVNLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIEC 804
Query: 612 VPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQD 671
VPED I FIVSTF+DQVVTLSTHPYGCRVIQRVLE+C DP TQQ +MDEIL VSMLAQD
Sbjct: 805 VPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQD 864
Query: 672 QYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF--------LVN 723
QYGNYVVQHVLEHGKPHER+AIIKE G IVQMSQQKFASNV+EKCL+F LVN
Sbjct: 865 QYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVN 924
Query: 724 EMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHI 783
EM+GSTD+NEPLQ MMKDQFANYVVQKVLETCDD Q ELIL+RIKVHLNALKKYTYGKHI
Sbjct: 925 EMIGSTDDNEPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHI 984
Query: 784 VARVEKLVAAGERRIA 799
VARVEKLVAAGERRI+
Sbjct: 985 VARVEKLVAAGERRIS 1000
>Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524277-42532024 | 20130731
Length = 973
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/801 (49%), Positives = 509/801 (63%), Gaps = 67/801 (8%)
Query: 25 KQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMTSAEADLADLCRDSSATDALR 84
++ ++I QD + T++ SRPAS NAF VDI S D + LR
Sbjct: 211 RRTCYSDILQDGFD-QPTLSSNMSRPASHNAF---VDIRDSTG------IVDREPLEGLR 260
Query: 85 SGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVAAA 144
S + G QN+G +S+ +++ +GS LSRSTTP+ HV P P G +V +A
Sbjct: 261 SSASTPGLVGLQNHGV-NSHNFSSVVGSSLSRSTTPE-SHVIGRPVGSGVPQMGSKVFSA 318
Query: 145 EKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRYLF 204
E G+ N + + S+ + AD+V +LSG+NLS + DN S+++ +VDNH +
Sbjct: 319 ENIGLGNHNGH--SSNMTDLADMVSSLSGLNLSGARRAEQDNLLKSKLQVEVDNHANVML 376
Query: 205 GLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGPDINN-SLDRQIELQKSAVS-- 261
+ K + D+N SL+ ++ L K S
Sbjct: 377 STPNNVNLPKHNEL-----------------------ATDLNTFSLNERVNLLKKTASYA 413
Query: 262 --PNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLS-HGR--------MGNQI 310
+N++ G+ TS + G +P+ Y N+ + N+L + GR +GNQ+
Sbjct: 414 NLRSNAHSTGNLTS-IDFAGQVPSAYPANTTLNNVYNNHLETALRGRRDGHNIDALGNQV 472
Query: 311 SGGALQAPFVDPMYLQYMR-ASEYGSPQLAALNDPSVDRNYLGNSYMNLLE-LQKAYLGN 368
+ +DP +Q ++ +SEY +++ DP RN+ S LE LQKAYL
Sbjct: 473 RSD-FNSATLDPRIIQCLQQSSEYSMHGMSSSRDPFQMRNFSDASQHGDLEGLQKAYLET 531
Query: 369 LLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXXXXIRHN 428
LLS K QY +PL KSG N G +G+ YG+G+ + G ++N +
Sbjct: 532 LLSQQKQQYELPLLSKSGLLNQ-GLFGSQPYGLGMPHSGKQISNSSLPSLGSGNPLFENE 590
Query: 429 DLNMHFASGMRNVAGVMGP-WHLDSGN-MDESFASSLLEEFKSNKTKCFELSEISGHVVE 486
++ H S MR+ G G WH D GN M+ FASSLL+EFK+NKTK FELS+I HVV+
Sbjct: 591 QIS-HINSMMRSSLGGSGSSWHADIGNNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQ 649
Query: 487 FSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRR 546
FS DQYGSRFIQQKLETA+ EEKT ++ EI+PHA ALMTDVFGNYV+QKFFEHG SQR+
Sbjct: 650 FSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRK 709
Query: 547 ELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQ 606
ELAN+L HVL LSLQMYGCRVIQKA+EVVD+DQ+ MV EL G IM+CVRDQNGNHVIQ
Sbjct: 710 ELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQ 769
Query: 607 KCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVS 666
KCIE VP++ I FI+++F+ QVV LSTHPYGCRVIQRVLEHC D TQ+ +M+EI+ +V
Sbjct: 770 KCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVC 829
Query: 667 MLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF------ 720
LAQDQYGNYV+QH+LEHGKP+ER+ +I +LAG IV+MSQQKFASNV+EKCLAF
Sbjct: 830 TLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEER 889
Query: 721 --LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYT 778
LVNEMLG++DENEPLQAMMKD F NYVVQKVLETCDD ELILSRIKVHLNALK+YT
Sbjct: 890 QILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYT 949
Query: 779 YGKHIVARVEKLVAAGERRIA 799
YGKHIV+RVEKL+ GERRI
Sbjct: 950 YGKHIVSRVEKLITTGERRIG 970
>Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/560 (48%), Positives = 352/560 (62%), Gaps = 36/560 (6%)
Query: 255 LQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLSHG-------RMG 307
L +AV P S + PF G + Y PL S+ N +SHG +
Sbjct: 424 LNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGN---ISHGAEMVHANKYL 480
Query: 308 NQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQK---- 363
Q G +Q F DP+Y+QY + ++ DP R + +N + QK
Sbjct: 481 GQF-GFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASVVQ--INPYDSQKRPGT 537
Query: 364 -AYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGN-PAYGVGLSYPGSPMANXXXXXXXXX 421
AYL + H+ + + + GG Y+G+ P G + YPGSP+ +
Sbjct: 538 GAYLDDK-KLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDG 596
Query: 422 XXXIR--HNDLNMHFASGMRN---VAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFE 476
+ N++ ASG RN V G GP DSG + + LEE KS K + FE
Sbjct: 597 SPGLSGGRNEIKPSPASG-RNGGMVTGWYGPRSFDSG--QDPKIVNFLEELKSGKGRRFE 653
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
LS+I GH+VEFS+DQ+GSRFIQQKLE+ EEK +V++E++PHA LMTDVFGNYV+QKF
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 537 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCV 596
FE+G QR+ELA KL +L LSLQMYGCRVIQKA+EV++ +QK +V+ELDGNIMRCV
Sbjct: 714 FEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCV 773
Query: 597 RDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK 656
RDQNGNHVIQKCIE +P + I FI+S F QV LS HPYGCRVIQR+LEHC D Q
Sbjct: 774 RDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQF 833
Query: 657 VMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEK 716
++DEIL +V LAQDQYGNYV QHVLE G+P ERS II +L+G++VQ+SQ KFASNVVEK
Sbjct: 834 IVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEK 893
Query: 717 CLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIK 768
CL + L+ E++ ++N+ L MMKDQFANYV+QKV++ C ++QR +LS I+
Sbjct: 894 CLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIR 953
Query: 769 VHLNALKKYTYGKHIVARVE 788
H NALKKYTYGKHIVAR+E
Sbjct: 954 AHANALKKYTYGKHIVARME 973
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 545 RRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHV 604
RR + + H++ S +G R IQ+ +E ++K + +E+ + + + D GN+V
Sbjct: 650 RRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYV 709
Query: 605 IQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 664
IQK E + + Q++ LS YGCRVIQ+ LE + Q V E+ G
Sbjct: 710 IQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVR-ELDGN 768
Query: 665 VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLA----- 719
+ +DQ GN+V+Q +E ++ I+ G + +S + V+++ L
Sbjct: 769 IMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDE 828
Query: 720 ----FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALK 775
F+V+E+L E + ++ +DQ+ NYV Q VLE +R I+S++ H+ L
Sbjct: 829 VQCQFIVDEIL------ESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLS 882
Query: 776 KYTYGKHIVARVEKLVAAGERRI 798
++ + ++V + + A ER +
Sbjct: 883 QHKFASNVVEKCLEYGDASEREV 905
>Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/560 (48%), Positives = 352/560 (62%), Gaps = 36/560 (6%)
Query: 255 LQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLSHG-------RMG 307
L +AV P S + PF G + Y PL S+ N +SHG +
Sbjct: 424 LNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGN---ISHGAEMVHANKYL 480
Query: 308 NQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQK---- 363
Q G +Q F DP+Y+QY + ++ DP R + +N + QK
Sbjct: 481 GQF-GFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASVVQ--INPYDSQKRPGT 537
Query: 364 -AYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGN-PAYGVGLSYPGSPMANXXXXXXXXX 421
AYL + H+ + + + GG Y+G+ P G + YPGSP+ +
Sbjct: 538 GAYLDDK-KLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDG 596
Query: 422 XXXIR--HNDLNMHFASGMRN---VAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFE 476
+ N++ ASG RN V G GP DSG + + LEE KS K + FE
Sbjct: 597 SPGLSGGRNEIKPSPASG-RNGGMVTGWYGPRSFDSG--QDPKIVNFLEELKSGKGRRFE 653
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
LS+I GH+VEFS+DQ+GSRFIQQKLE+ EEK +V++E++PHA LMTDVFGNYV+QKF
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 537 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCV 596
FE+G QR+ELA KL +L LSLQMYGCRVIQKA+EV++ +QK +V+ELDGNIMRCV
Sbjct: 714 FEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCV 773
Query: 597 RDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK 656
RDQNGNHVIQKCIE +P + I FI+S F QV LS HPYGCRVIQR+LEHC D Q
Sbjct: 774 RDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQF 833
Query: 657 VMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEK 716
++DEIL +V LAQDQYGNYV QHVLE G+P ERS II +L+G++VQ+SQ KFASNVVEK
Sbjct: 834 IVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEK 893
Query: 717 CLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIK 768
CL + L+ E++ ++N+ L MMKDQFANYV+QKV++ C ++QR +LS I+
Sbjct: 894 CLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLLSHIR 953
Query: 769 VHLNALKKYTYGKHIVARVE 788
H NALKKYTYGKHIVAR+E
Sbjct: 954 AHANALKKYTYGKHIVARME 973
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 545 RRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHV 604
RR + + H++ S +G R IQ+ +E ++K + +E+ + + + D GN+V
Sbjct: 650 RRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYV 709
Query: 605 IQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 664
IQK E + + Q++ LS YGCRVIQ+ LE + Q V E+ G
Sbjct: 710 IQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVR-ELDGN 768
Query: 665 VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLA----- 719
+ +DQ GN+V+Q +E ++ I+ G + +S + V+++ L
Sbjct: 769 IMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDE 828
Query: 720 ----FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALK 775
F+V+E+L E + ++ +DQ+ NYV Q VLE +R I+S++ H+ L
Sbjct: 829 VQCQFIVDEIL------ESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLS 882
Query: 776 KYTYGKHIVARVEKLVAAGERRI 798
++ + ++V + + A ER +
Sbjct: 883 QHKFASNVVEKCLEYGDASEREV 905
>Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42529214 | 20130731
Length = 846
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 298/673 (44%), Positives = 400/673 (59%), Gaps = 59/673 (8%)
Query: 25 KQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMTSAEADLADLCRDSSATDALR 84
++ ++I QD + T++ SRPAS NAF VDI S D + LR
Sbjct: 211 RRTCYSDILQDGFD-QPTLSSNMSRPASHNAF---VDIRDSTG------IVDREPLEGLR 260
Query: 85 SGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVAAA 144
S + G QN+G +S+ +++ +GS LSRSTTP+ HV P P G +V +A
Sbjct: 261 SSASTPGLVGLQNHGV-NSHNFSSVVGSSLSRSTTPE-SHVIGRPVGSGVPQMGSKVFSA 318
Query: 145 EKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRYLF 204
E G+ N + + S+ + AD+V +LSG+NLS + DN S+++ +VDNH +
Sbjct: 319 ENIGLGNHNGH--SSNMTDLADMVSSLSGLNLSGARRAEQDNLLKSKLQVEVDNHANVML 376
Query: 205 GLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGPDINN-SLDRQIELQKSAVS-- 261
+ K + D+N SL+ ++ L K S
Sbjct: 377 STPNNVNLPKHNEL-----------------------ATDLNTFSLNERVNLLKKTASYA 413
Query: 262 --PNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLS-HGR--------MGNQI 310
+N++ G+ TS + G +P+ Y N+ + N+L + GR +GNQ+
Sbjct: 414 NLRSNAHSTGNLTS-IDFAGQVPSAYPANTTLNNVYNNHLETALRGRRDGHNIDALGNQV 472
Query: 311 SGGALQAPFVDPMYLQYMR-ASEYGSPQLAALNDPSVDRNYLGNSYMNLLE-LQKAYLGN 368
+ +DP +Q ++ +SEY +++ DP RN+ S LE LQKAYL
Sbjct: 473 RSD-FNSATLDPRIIQCLQQSSEYSMHGMSSSRDPFQMRNFSDASQHGDLEGLQKAYLET 531
Query: 369 LLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXXXXIRHN 428
LLS K QY +PL KSG N G +G+ YG+G+ + G ++N +
Sbjct: 532 LLSQQKQQYELPLLSKSGLLNQ-GLFGSQPYGLGMPHSGKQISNSSLPSLGSGNPLFENE 590
Query: 429 DLNMHFASGMRNVAGVMGP-WHLDSGN-MDESFASSLLEEFKSNKTKCFELSEISGHVVE 486
++ H S MR+ G G WH D GN M+ FASSLL+EFK+NKTK FELS+I HVV+
Sbjct: 591 QIS-HINSMMRSSLGGSGSSWHADIGNNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQ 649
Query: 487 FSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRR 546
FS DQYGSRFIQQKLETA+ EEKT ++ EI+PHA ALMTDVFGNYV+QKFFEHG SQR+
Sbjct: 650 FSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRK 709
Query: 547 ELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQ 606
ELAN+L HVL LSLQMYGCRVIQKA+EVVD+DQ+ MV EL G IM+CVRDQNGNHVIQ
Sbjct: 710 ELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQ 769
Query: 607 KCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVS 666
KCIE VP++ I FI+++F+ QVV LSTHPYGCRVIQRVLEHC D TQ+ +M+EI+ +V
Sbjct: 770 KCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVC 829
Query: 667 MLAQDQYGNYVVQ 679
LAQDQYGNYV+Q
Sbjct: 830 TLAQDQYGNYVIQ 842
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 552 LFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIEC 611
+ HV+ S YG R IQ+ +E +++K + E+ + + D GN+VIQK E
Sbjct: 643 IIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEH 702
Query: 612 VPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQD 671
+ + + V+ LS YGCRVIQ+ LE D + Q +++ E+ GA+ +D
Sbjct: 703 GTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALE-VVDVDQQSQMVSELSGAIMKCVRD 761
Query: 672 QYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFLVNEMLGSTDE 731
Q GN+V+Q +E + II G +V +S + V+++ L +
Sbjct: 762 QNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIM 821
Query: 732 NEPLQA---MMKDQFANYVVQ 749
E +Q+ + +DQ+ NYV+Q
Sbjct: 822 EEIMQSVCTLAQDQYGNYVIQ 842
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 619 FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVV 678
F +S D VV ST YG R IQ+ LE + K+ EIL L D +GNYV+
Sbjct: 638 FELSDIIDHVVQFSTDQYGSRFIQQKLE-TASVEEKTKIFPEILPHARALMTDVFGNYVI 696
Query: 679 QHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF--------LVNEMLGSTD 730
Q EHG +R + +L G+++ +S Q + V++K L +V+E+ G+
Sbjct: 697 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGA-- 754
Query: 731 ENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARV 787
+ ++DQ N+V+QK +E+ ++ + I++ + AL + YG ++ RV
Sbjct: 755 ----IMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRV 807
>Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-16000131 | 20130731
Length = 926
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/507 (46%), Positives = 308/507 (60%), Gaps = 36/507 (7%)
Query: 255 LQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLSHG-------RMG 307
L +AV P S + PF G + Y PL S+ N +SHG +
Sbjct: 424 LNPTAVQPYISAYPPHGAVPFVVDGATSSSYAPLTPGVSTGGN---ISHGAEMVHANKYL 480
Query: 308 NQISGGALQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQK---- 363
Q G +Q F DP+Y+QY + ++ DP R + +N + QK
Sbjct: 481 GQF-GFPVQPSFGDPIYMQYNQQPFVEGYGISGHFDPQAPRASVVQ--INPYDSQKRPGT 537
Query: 364 -AYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGN-PAYGVGLSYPGSPMANXXXXXXXXX 421
AYL + H+ + + + GG Y+G+ P G + YPGSP+ +
Sbjct: 538 GAYLDDK-KLHEQRTGASMNSRRGGLPVPNYFGHVPNTGFVMQYPGSPLPSPVLSGYPDG 596
Query: 422 XXXIR--HNDLNMHFASGMRN---VAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFE 476
+ N++ ASG RN V G GP DSG + + LEE KS K + FE
Sbjct: 597 SPGLSGGRNEIKPSPASG-RNGGMVTGWYGPRSFDSGQ--DPKIVNFLEELKSGKGRRFE 653
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
LS+I GH+VEFS+DQ+GSRFIQQKLE+ EEK +V++E++PHA LMTDVFGNYV+QKF
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 537 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCV 596
FE+G QR+ELA KL +L LSLQMYGCRVIQKA+EV++ +QK +V+ELDGNIMRCV
Sbjct: 714 FEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCV 773
Query: 597 RDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK 656
RDQNGNHVIQKCIE +P + I FI+S F QV LS HPYGCRVIQR+LEHC D Q
Sbjct: 774 RDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQF 833
Query: 657 VMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEK 716
++DEIL +V LAQDQYGNYV QHVLE G+P ERS II +L+G++VQ+SQ KFASNVVEK
Sbjct: 834 IVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEK 893
Query: 717 CLAF--------LVNEMLGSTDENEPL 735
CL + L+ E++ ++N+ L
Sbjct: 894 CLEYGDASEREVLIVEIIAHDEQNDNL 920
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 16/263 (6%)
Query: 545 RRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHV 604
RR + + H++ S +G R IQ+ +E ++K + +E+ + + + D GN+V
Sbjct: 650 RRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYV 709
Query: 605 IQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 664
IQK E + + Q++ LS YGCRVIQ+ LE + Q V E+ G
Sbjct: 710 IQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVR-ELDGN 768
Query: 665 VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLA----- 719
+ +DQ GN+V+Q +E ++ I+ G + +S + V+++ L
Sbjct: 769 IMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDE 828
Query: 720 ----FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALK 775
F+V+E+L E + ++ +DQ+ NYV Q VLE +R I+S++ H+ L
Sbjct: 829 VQCQFIVDEIL------ESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLS 882
Query: 776 KYTYGKHIVARVEKLVAAGERRI 798
++ + ++V + + A ER +
Sbjct: 883 QHKFASNVVEKCLEYGDASEREV 905
>Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42528433 | 20130731
Length = 787
Score = 309 bits (791), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 223/566 (39%), Positives = 309/566 (54%), Gaps = 59/566 (10%)
Query: 25 KQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIMTSAEADLADLCRDSSATDALR 84
++ ++I QD + T++ SRPAS NAF VDI S D + LR
Sbjct: 242 RRTCYSDILQDGFD-QPTLSSNMSRPASHNAF---VDIRDSTG------IVDREPLEGLR 291
Query: 85 SGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGGRVAAA 144
S + G QN+G +S+ +++ +GS LSRSTTP+ HV P P G +V +A
Sbjct: 292 SSASTPGLVGLQNHGV-NSHNFSSVVGSSLSRSTTPE-SHVIGRPVGSGVPQMGSKVFSA 349
Query: 145 EKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVESDVDNHRRYLF 204
E G+ N + + S+ + AD+V +LSG+NLS + DN S+++ +VDNH +
Sbjct: 350 ENIGLGNHNGH--SSNMTDLADMVSSLSGLNLSGARRAEQDNLLKSKLQVEVDNHANVML 407
Query: 205 GLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGPDINN-SLDRQIELQKSAVS-- 261
+ K + D+N SL+ ++ L K S
Sbjct: 408 STPNNVNLPKHNEL-----------------------ATDLNTFSLNERVNLLKKTASYA 444
Query: 262 --PNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTNYLPLS-HGR--------MGNQI 310
+N++ G+ TS + G +P+ Y N+ + N+L + GR +GNQ+
Sbjct: 445 NLRSNAHSTGNLTS-IDFAGQVPSAYPANTTLNNVYNNHLETALRGRRDGHNIDALGNQV 503
Query: 311 SGGALQAPFVDPMYLQYMR-ASEYGSPQLAALNDPSVDRNYLGNSYMNLLE-LQKAYLGN 368
+ +DP +Q ++ +SEY +++ DP RN+ S LE LQKAYL
Sbjct: 504 RSD-FNSATLDPRIIQCLQQSSEYSMHGMSSSRDPFQMRNFSDASQHGDLEGLQKAYLET 562
Query: 369 LLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXXXXIRHN 428
LLS K QY +PL KSG N G +G+ YG+G+ + G ++N +
Sbjct: 563 LLSQQKQQYELPLLSKSGLLNQ-GLFGSQPYGLGMPHSGKQISNSSLPSLGSGNPLFENE 621
Query: 429 DLNMHFASGMRNVAGVMGP-WHLDSGN-MDESFASSLLEEFKSNKTKCFELSEISGHVVE 486
++ H S MR+ G G WH D GN M+ FASSLL+EFK+NKTK FELS+I HVV+
Sbjct: 622 QIS-HINSMMRSSLGGSGSSWHADIGNNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQ 680
Query: 487 FSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRR 546
FS DQYGSRFIQQKLETA+ EEKT ++ EI+PHA ALMTDVFGNYV+QKFFEHG SQR+
Sbjct: 681 FSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRK 740
Query: 547 ELANKLFSHVLTLSLQMYGCRVIQKA 572
ELAN+L HVL LSLQMYGCRVIQK
Sbjct: 741 ELANQLTGHVLPLSLQMYGCRVIQKV 766
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 619 FIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVV 678
F +S D VV ST YG R IQ+ LE + K+ EIL L D +GNYV+
Sbjct: 669 FELSDIIDHVVQFSTDQYGSRFIQQKLE-TASVEEKTKIFPEILPHARALMTDVFGNYVI 727
Query: 679 QHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKC 717
Q EHG +R + +L G+++ +S Q + V++K
Sbjct: 728 QKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 552 LFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIEC 611
+ HV+ S YG R IQ+ +E +++K + E+ + + D GN+VIQK E
Sbjct: 674 IIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEH 733
Query: 612 VPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRV 644
+ + + V+ LS YGCRVIQ+V
Sbjct: 734 GTDSQRKELANQLTGHVLPLSLQMYGCRVIQKV 766
>Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:1611979-1606856 | 20130731
Length = 745
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 170/317 (53%), Gaps = 9/317 (2%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
L E G + + DQ G RF+Q+ + E+ M++ EI+ H + LM FGNY+++K
Sbjct: 424 LMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKL 483
Query: 537 FEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLDQKINMV-QELDGNI 592
+ QR ++ + ++ +SL +G RV+QK IE + Q++++V L+
Sbjct: 484 LDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALEPGF 543
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ ++D NGNHV+Q C+E + FI + ++TH +GC V+ + + + +
Sbjct: 544 LILIKDNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEH 603
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
+Q+++ EI +LAQD+YGNYVVQ+VL+ P + + ++ GN V MS QKF+S
Sbjct: 604 -RQRLVAEISANALLLAQDKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSR 662
Query: 713 VVEKCLAFLVNE----MLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIK 768
VVEKCL +E ++ + +++D ANYV+QK L + H L++ +I+
Sbjct: 663 VVEKCLVVFNDENRAKIIHELLSDPHFDLLLQDPHANYVIQKALRHSEGHVYNLLVEKIE 722
Query: 769 VHLNALKKYTYGKHIVA 785
+ + Y K I +
Sbjct: 723 SYKAICRNSPYSKKIFS 739
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 466 EFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMT 525
E+ N F + H ++ + Q+G + + + ++ E + + EI +AL L
Sbjct: 561 EYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQ 620
Query: 526 DVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMV 585
D +GNYVVQ + + S L + + + +S+Q + RV++K + V + + + ++
Sbjct: 621 DKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKII 680
Query: 586 QEL--DGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQR 643
EL D + ++D + N+VIQK + + +V PY ++
Sbjct: 681 HELLSDPHFDLLLQDPHANYVIQKALRHSEGHVYNLLVEKIESYKAICRNSPYSKKIFSH 740
Query: 644 VL 645
L
Sbjct: 741 KL 742
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 45/216 (20%)
Query: 581 KINMVQELDGNIMRCVRDQNGNHVIQKCIE------------------------------ 610
K N + E G I +DQNG +Q+ +
Sbjct: 420 KYNSLMEARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYL 479
Query: 611 -------CVPEDAIDFIVSTFFD--QVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEI 661
C E + I+ + Q+V +S + +G RV+Q+++E K V+ +
Sbjct: 480 IRKLLDVCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSAL 539
Query: 662 LGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFL 721
+L +D GN+VVQH LE+ + + I A + + ++ + V+ KC+ +
Sbjct: 540 EPGFLILIKDNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYS 599
Query: 722 VNE----MLGSTDENEPLQAMMKDQFANYVVQKVLE 753
E ++ N L A +D++ NYVVQ VL+
Sbjct: 600 SGEHRQRLVAEISANALLLA--QDKYGNYVVQYVLD 633
>Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:26380049-26384328 | 20130731
Length = 712
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 171/318 (53%), Gaps = 11/318 (3%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
L E+ ++ + DQ G RF+Q +E T E+ MV+ ++ + + LM D FGNY+VQK
Sbjct: 393 LPELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKL 452
Query: 537 FEHGLASQRRELA---NKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQE--LDGN 591
E QR ++ K+ ++ S +G R +QK I + ++I +V+ L G
Sbjct: 453 LEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPG- 511
Query: 592 IMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDP 651
+ V+D NGNHVIQ+C+ C +FI + ++TH +GC V+QR ++ K
Sbjct: 512 FLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKG- 570
Query: 652 NTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFAS 711
+ +K++ EI LAQD YGNYV+Q+++E P + + + GN V +S QKF+S
Sbjct: 571 KSLEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSS 630
Query: 712 NVVEKCLAFLVNEMLGSTDE--NEP-LQAMMKDQFANYVVQKVLETCDDHQRELILSRIK 768
+VVEKCL ++V E + P + +++D +ANYVVQK LE ++ ++
Sbjct: 631 HVVEKCLIYIVETRARIVQELLSVPHFERLLQDPYANYVVQKALEYTKGSLHASLVEAVR 690
Query: 769 VHLNALKKYTYGKHIVAR 786
H L+ Y K I ++
Sbjct: 691 AH-KILRTSPYCKRIFSK 707
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 23/265 (8%)
Query: 551 KLFSHVLTLSLQMYGCRVIQKAIE---VVDLDQKINMVQELDGNIMRCVRDQNGNHVIQK 607
+L S++ ++ G R +Q +E V D++ N V + N++ + D GN+++QK
Sbjct: 395 ELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVID---NVVELMMDPFGNYLVQK 451
Query: 608 CIECVPEDA---IDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 664
+E +D I +++ Q+V S + +G R +Q+++ K V IL
Sbjct: 452 LLEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPG 511
Query: 665 VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF---- 720
L +D GN+V+Q L + I + ++ + V+++C+ F
Sbjct: 512 FLDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGK 571
Query: 721 ----LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKK 776
LV E+ ++ +D + NYV+Q ++E + + K + L
Sbjct: 572 SLEKLVKEICKHGF------SLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILST 625
Query: 777 YTYGKHIVARVEKLVAAGERRIAAQ 801
+ H+V + + RI +
Sbjct: 626 QKFSSHVVEKCLIYIVETRARIVQE 650
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 74/279 (26%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKT-MVYQEIMPHALALMTDVFGNYVVQ- 534
L+++ G +V S + +G+R +Q+ + T + + +V I+P L L+ D+ GN+V+Q
Sbjct: 468 LTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPGFLDLVKDLNGNHVIQR 527
Query: 535 ------------------KFF------EHGLASQRR-----------ELANKLFSHVLTL 559
KF +HG +R +L ++ H +L
Sbjct: 528 CLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKEICKHGFSL 587
Query: 560 SLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDF 619
+ YG VIQ IE+ + + GN + + +HV++KC + +
Sbjct: 588 AQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKC--------LIY 639
Query: 620 IVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQ 679
IV T R++Q +L + L QD Y NYVVQ
Sbjct: 640 IVET-------------RARIVQELLS---------------VPHFERLLQDPYANYVVQ 671
Query: 680 HVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL 718
LE+ K +++++ + + + + + + K L
Sbjct: 672 KALEYTKGSLHASLVEAVRAHKI-LRTSPYCKRIFSKTL 709
>Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:25781137-25777781 | 20130731
Length = 349
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 138/266 (51%), Gaps = 8/266 (3%)
Query: 512 VYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLFSH---VLTLSLQMYGCRV 568
++ E++ + D F + +VQ E G QR ++ KL H ++ SL YG +
Sbjct: 21 MFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDSYGTKC 80
Query: 569 IQKAIEVVDLDQKINMVQ-ELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQ 627
+QK I + ++I +V L + V D +GN V+Q+C+ C + +FI
Sbjct: 81 VQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSVEDNEFIYDAATRF 140
Query: 628 VVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKP 687
++T +GC ++QR +E + N+QQK++ EI LAQ +YGN++VQ++++ P
Sbjct: 141 CYAVATDEHGCCLLQRCIEF-SNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYIIQMQNP 199
Query: 688 HERSAIIKELAGNIVQMSQQKFASNVVEKCLAFLVNEMLGSTDENEPL---QAMMKDQFA 744
+ + + G VQ+S QKF+ +VVEKCL +V E + + +++D +A
Sbjct: 200 SAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFLAVPYFENLLQDPYA 259
Query: 745 NYVVQKVLETCDDHQRELILSRIKVH 770
NYVVQ L+ + E ++ ++ H
Sbjct: 260 NYVVQCALKFTEGSLHESLVETVRSH 285
>Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC |
chr1:48418651-48415981 | 20130731
Length = 465
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 25/353 (7%)
Query: 464 LEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALAL 523
+E + + CF G +V + ++ R+IQQK+ + ++ E+ L
Sbjct: 118 IEATAAQRMHCFHTCR--GSLVSMAMNRRDCRYIQQKIRMGNPTDVALILYEVKDSLHML 175
Query: 524 MTDVFGNYVVQKFFE--HGLAS--QRRELANKLFSHVLTL---SLQMYGCRVIQKAIEVV 576
MT +GN+++QK FE G+ + Q+ L + S+ L + +G RV+Q ++ +
Sbjct: 176 MTHPYGNHLIQKIFEARRGIITRDQKHSLVYLIISNYQKLRNVCMDFHGTRVMQIMLKNI 235
Query: 577 D-LDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHP 635
L + +V + + +++ NG++VI +C++ P + + I+ V +ST+
Sbjct: 236 KCLFMQYVVVYTMKHITVALMKNFNGSYVIVECLKLFPPEHQNIILDEVARNCVDISTNK 295
Query: 636 YGCRVIQRVLEHCKDPNTQ-QKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAII 694
G VIQ+ L K T ++ +I+ +LA+DQYGNYV++ V+ ++
Sbjct: 296 VGTSVIQKCLR--KGAITAIAPLVAKIISNAMILAEDQYGNYVLKCVIMMKFASANEQMV 353
Query: 695 KELAGNIVQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANY 746
KEL G V++S K+ASNVVE L F +V E++ S D LQ D F NY
Sbjct: 354 KELRGQFVRLSVNKYASNVVENLLTFSKLDDVEVIVEEIISSHDFLNVLQ----DPFGNY 409
Query: 747 VVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIA 799
V Q+ L+ H R + + I + L + YGK ++ + R+
Sbjct: 410 VAQRSLKCTQGHLRRKLSNLIISNHRTLHSHPYGKKVLTMANDIYGKKVHRLC 462
>Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:729409-732877 | 20130731
Length = 434
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 169/370 (45%), Gaps = 29/370 (7%)
Query: 438 MRNVAGVMGPW--HLDSGNMDE--SFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYG 493
M + MG HLD M S ++L N + F G VV + +
Sbjct: 59 MEEIYSAMGGLFTHLDFYRMRHRASVEAALPHPHTDNYSNHFASPPWRGFVVSMAMNHRE 118
Query: 494 SRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE--HGLASQRRELANK 551
+++Q ++ TM+ E+ + LMT FG+Y++QK F+ G+ Q+ +L
Sbjct: 119 CQYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGMTCQQMDLTVF 178
Query: 552 LF----SHVLTLSLQMYGCRVIQKAIEVVDLDQK----INMVQELDGNIMRCVRDQNGNH 603
L + + + +G R +Q I V + M+Q + +M+ V NG++
Sbjct: 179 LIISNHRKLKDVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIPLMKNV---NGSY 235
Query: 604 VIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILG 663
VI +C++ P I+ V ++T GC +++ L++ + ++ +I+
Sbjct: 236 VIVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAIDILVAQIIS 295
Query: 664 AVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF--- 720
+L++D YGNYVVQ V++ P +++EL ++S K+ASNVVE L+F
Sbjct: 296 NAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVVEYLLSFSNQ 355
Query: 721 -----LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALK 775
+ E++ S + ++ D + NYV Q+ L H R S IK H AL+
Sbjct: 356 DAVKVIAEEIMRSRN----FLNVLHDPYGNYVAQRALRCTKGHVRRRFSSLIKSHRLALQ 411
Query: 776 KYTYGKHIVA 785
+ YGK+++
Sbjct: 412 SHIYGKNVLT 421
>Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr3:47305805-47309075 | 20130731
Length = 554
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 19/289 (6%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
E G V + D +GS+ +Q+ +E E + + E++ H LM D G V+ K
Sbjct: 209 FDEFRGRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKM 268
Query: 537 FEHGLASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIE-VVDLDQKINMVQELDGNI 592
E Q+ ++ + H + + L ++G R ++K +E V +Q+ ++ L
Sbjct: 269 VEVCNQDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGA 328
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ +D NG+ V+ C++ P + + ++LS GC V+Q + H +
Sbjct: 329 IVLSKDINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGA- 387
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
T+ ++ EI+ +LA+D YGNYV+QH++ P + +L V +S K+ SN
Sbjct: 388 TKNLLIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSN 447
Query: 713 VVEKCL--------AFLVNEMLGSTDENEP-LQAMMKDQFANYVVQKVL 752
VVEK L + ++ E+L N+P + ++ D + N+V+ L
Sbjct: 448 VVEKFLHDSGVDISSCIIIELL-----NDPNVTRLLTDPYGNFVISTAL 491
>Medtr1g100230.1 | pumilio-like protein | LC |
chr1:45172367-45174672 | 20130731
Length = 416
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 28/321 (8%)
Query: 484 VVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE--HGL 541
V+ + D G +++Q K+E + + + H LMT NY+++K F+ G+
Sbjct: 94 VLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTH-NNNYLIKKIFQARSGV 152
Query: 542 ASQRRELA-------NKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIN--MVQELDGNI 592
++ E ++ HV + G RV+Q ++ + L +V +
Sbjct: 153 TPEQMESIVLSIISDDQKLKHV---CMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRIT 209
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ V+ NG +VI +C++ + I+ V ++T GC +IQ+ L + +
Sbjct: 210 LALVKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLS-LVEGS 268
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
+ ++ EI+ +LA+D YGNYV+Q V+ R +IK+L G + S K +SN
Sbjct: 269 VKSLLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSN 328
Query: 713 VVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 764
VVE L F +V E++ S D +++D F NYV Q+ L+ +
Sbjct: 329 VVEDLLRFSNENDVAVIVEEIMKSCD----FLNVVQDPFGNYVAQRALKCTKGRLHRELA 384
Query: 765 SRIKVHLNALKKYTYGKHIVA 785
I + L+ + YGK ++
Sbjct: 385 KLITSNKRILQSHLYGKRVLT 405
>Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484 |
20130731
Length = 379
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 482 GHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE--H 539
G VV + + +++ ++ M+ ++ + LM FG+ +++K FE
Sbjct: 114 GSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAKK 173
Query: 540 GLASQRRE------LANKLFSHVLTLSLQMYGCRVIQKAIEVVDLD-QKINMVQELDGNI 592
G+A ++ + LAN + + + YG RV+Q + K + + N
Sbjct: 174 GMAMEQMDSIVYLILAND--RKMWDVCINYYGTRVMQTILHNTRHPFMKFVVAYAVKRNT 231
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+++ NG+HVI +C++ P I+ ++T GC ++R L+H +
Sbjct: 232 TALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLKHGEGT- 290
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
A+ +L N +V +V++ P + +I+E ++S K+ASN
Sbjct: 291 -----------AIDLLVTQIISNAMVLYVIKMKFPLAKEWMIEEFQNKFDRLSMNKYASN 339
Query: 713 VVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYV 747
V+E L F +V E++ S + + LQ D F NYV
Sbjct: 340 VMEYLLRFSNKSAVKVIVEEIMRSRNFLKVLQ----DPFGNYV 378
>Medtr4g120470.1 | pumilio-like protein | HC |
chr4:49940997-49933657 | 20130731
Length = 639
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 124/285 (43%), Gaps = 34/285 (11%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
L+++ G + E + SR +Q ++ + E+ V++E+ PH L L + ++V+K
Sbjct: 110 LTKMKGKIHEIAGSHITSRVLQTCVKHCSQAERDQVFEELRPHFLNLAYSAYAVHLVKKM 169
Query: 537 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCV 596
++ Q + L HV L M G V++ A ++ QK ++ EL ++
Sbjct: 170 LDNASKKQLAGFISTLRGHVAPLLRHMVGSVVVEHAYDLASAAQKQELLLELYSTELQLF 229
Query: 597 RDQNGNHVIQKCIECVP--EDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEH-CKDPNT 653
+D VP E + ++S Q ++S H +VIQ +LE D +
Sbjct: 230 KD------------LVPAKETRLLDVMSKLGLQKGSVSRH--MSKVIQPILEKGIVDHSI 275
Query: 654 QQKVMDEILG-----AVSMLAQDQYGNYVVQHV------------LEHGKPHERSAIIKE 696
+V+ E +V+ + Q +++ + +++G ER IIK
Sbjct: 276 LHRVLLEYFSIADKTSVAEIIQQLSSPLLIRMIGTKDGAKIGILCVKYGNAKERKKIIKG 335
Query: 697 LAGNIVQMSQQKFASNVVEKCLAFLVNEMLGSTDENEPLQAMMKD 741
L G+I + + ++ V+ L+ + + L + LQ+++K+
Sbjct: 336 LKGHIGKTAYHQYGCMVLVSILSVVDDTKLITKVIIRELQSILKE 380