Miyakogusa Predicted Gene

Lj0g3v0219409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0219409.1 Non Characterized Hit- tr|D7LSB0|D7LSB0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,82.05,0,Phosphoenolpyruvate/pyruvate
domain,Pyruvate/Phosphoenolpyruvate kinase; no
description,Pyruvate/Pho,CUFF.14192.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028555.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   335   2e-92
Medtr4g037245.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   231   5e-61
Medtr4g037305.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   189   2e-48
Medtr4g037275.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   142   3e-34
Medtr4g037305.2 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   106   2e-23

>Medtr8g028555.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr8:10911490-10914114 | 20130731
          Length = 350

 Score =  335 bits (858), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/203 (80%), Positives = 182/203 (89%), Gaps = 2/203 (0%)

Query: 14  MACIVAKRRATTQCSSLLRCIRSMSNVPENTVYSGPISQNSNQRVTLAQLRQKHKKSEPI 73
           MA + +  +AT         +R+MSN+PENTVY+GP +QN  +RVTL+QL+QKHK S+PI
Sbjct: 1   MAILRSMLKATKTLHRSSSLLRNMSNLPENTVYTGPTTQN--KRVTLSQLQQKHKNSQPI 58

Query: 74  SMVTAYDYPSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTP 133
           +MVTAYDYPSAV +DMA IDICLVGDSA+MVVHG+DTTLPIT+DEMLVHCRAVARGAKTP
Sbjct: 59  TMVTAYDYPSAVHLDMAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTP 118

Query: 134 LLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGH 193
           LLVGDLPFGTYECS NQAVD AVRILKEG+MDAIKLEGGSPSRIVAAKAIVEAGIAV+GH
Sbjct: 119 LLVGDLPFGTYECSSNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGH 178

Query: 194 VGLTPQAISVLGGFRPQGRNVAS 216
           VGLTPQAISVLGGFRPQGRNVAS
Sbjct: 179 VGLTPQAISVLGGFRPQGRNVAS 201


>Medtr4g037245.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13724675-13722825 | 20130731
          Length = 186

 Score =  231 bits (588), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 113/127 (88%), Positives = 119/127 (93%)

Query: 75  MVTAYDYPSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPL 134
           MVTAYDYPSAV  DM  IDICLVGDSA+MVVH +DTTLPIT+DEMLVHCRAVARGAKTPL
Sbjct: 1   MVTAYDYPSAVHHDMKAIDICLVGDSASMVVHDHDTTLPITLDEMLVHCRAVARGAKTPL 60

Query: 135 LVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHV 194
           LVGDLPFGTYECS NQAVD AVRILKEG+MDAIKLEGGSPSRIVAAKAIVEAGIAV+GHV
Sbjct: 61  LVGDLPFGTYECSSNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHV 120

Query: 195 GLTPQAI 201
           GLTPQ +
Sbjct: 121 GLTPQEL 127


>Medtr4g037305.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13749976-13745180 | 20130731
          Length = 247

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 94/98 (95%)

Query: 119 MLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIV 178
           MLVHCRAVARGAKTPLLVGDLPFGTYECS NQAVD  VR LKEG+MDAIKLEGGSPSRIV
Sbjct: 1   MLVHCRAVARGAKTPLLVGDLPFGTYECSSNQAVDTTVRNLKEGQMDAIKLEGGSPSRIV 60

Query: 179 AAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVAS 216
           AAKAIVEAGIAV+GHVGLTPQAISVLGGFRPQGRNVAS
Sbjct: 61  AAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVAS 98


>Medtr4g037275.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13733110-13729241 | 20130731
          Length = 86

 Score =  142 bits (357), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/76 (86%), Positives = 70/76 (92%)

Query: 75  MVTAYDYPSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPL 134
           MVT YDYPSAV +DMA IDI LVGDSA+MVVH +DTTLPIT+DEMLVHCRAVARGAKTPL
Sbjct: 1   MVTVYDYPSAVHLDMAAIDISLVGDSASMVVHDHDTTLPITLDEMLVHCRAVARGAKTPL 60

Query: 135 LVGDLPFGTYECSPNQ 150
           LVGDLPFGTYECS NQ
Sbjct: 61  LVGDLPFGTYECSSNQ 76


>Medtr4g037305.2 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13749020-13744142 | 20130731
          Length = 216

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/53 (98%), Positives = 53/53 (100%)

Query: 164 MDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVAS 216
           MDAIKLEGGSPSRIVAAKAIVEAGIAV+GHVGLTPQAISVLGGFRPQGRNVAS
Sbjct: 1   MDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVAS 53