Miyakogusa Predicted Gene

Lj0g3v0218309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218309.1 Non Characterized Hit- tr|I1KKR5|I1KKR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,28.81,0.00000000000001, ,CUFF.14106.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0014s0490.1 | hypothetical protein | LC | scaffold0014:2380...    50   2e-06
Medtr8g075670.1 | hypothetical protein | LC | chr8:31995120-3199...    49   2e-06

>Medtr0014s0490.1 | hypothetical protein | LC |
           scaffold0014:238086-235591 | 20130731
          Length = 781

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 34  FASRSILPTKFGNILSFNSGGFLFQNLIEEQGLDQMFEDTVEYYPDLVKVFYCNLKV--- 90
            A+R I  +K+ +  S    G+  + L + QG         + +PDLVK FY N+ V   
Sbjct: 196 MANRPISRSKYFDFESLKKKGWNLKKLTDPQGWSSFVSTQCQTFPDLVKEFYANMTVKEH 255

Query: 91  -EKNVLYSQVKGKKIRMDVATFGNCARIPSVGLEL 124
            E+  L S VKG +I++      +  +IP+ G EL
Sbjct: 256 NEEKFLESTVKGVRIQVSHNLLSDILKIPNEGNEL 290


>Medtr8g075670.1 | hypothetical protein | LC |
           chr8:31995120-31992626 | 20130731
          Length = 753

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 34  FASRSILPTKFGNILSFNSGGFLFQNLIEEQGLDQMFEDTVEYYPDLVKVFYCNLKV--- 90
            A+R I  +K+ +  S    G+  + L + QG         + +PDLVK FY N+ V   
Sbjct: 196 MANRPISRSKYFDFESLKKKGWNLKKLTDPQGWSSFVSTQCQTFPDLVKEFYANMTVKEH 255

Query: 91  -EKNVLYSQVKGKKIRMDVATFGNCARIPSVGLEL 124
            E+  L S VKG +I++      +  +IP+ G EL
Sbjct: 256 NEEKFLESTVKGVRIQVSHNLLSDILKIPNEGNEL 290