Miyakogusa Predicted Gene

Lj0g3v0218259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218259.1 Non Characterized Hit- tr|I1KFN6|I1KFN6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3150
PE=,60.71,0.000000001, ,CUFF.14103.1
         (74 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g006790.1 | hypothetical protein | HC | chr3:868171-864960...    62   1e-10

>Medtr3g006790.1 | hypothetical protein | HC | chr3:868171-864960
          | 20130731
          Length = 204

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 39/47 (82%), Gaps = 2/47 (4%)

Query: 7  EEGIEFEKKVSIND-TMEV-DPTRIIVLLRDFLGIQQRRAEAYSNLK 51
          EE ++F KKVSIND TMEV D T+I+VLLR FL IQQRRA+AYS LK
Sbjct: 2  EEDLDFGKKVSINDDTMEVVDSTKIVVLLRSFLDIQQRRAQAYSKLK 48