Miyakogusa Predicted Gene

Lj0g3v0217509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0217509.1 tr|C1E946|C1E946_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_59600
,31.08,2e-17,no description,Tetratricopeptide-like helical;
SHNi-TPR,Tetratricopeptide, SHNi-TPR domain; HISTONE
,NODE_33790_length_1820_cov_97.925278.path2.1
         (212 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g018600.1 | TPR domain protein | HC | chr5:6944048-6947851...   271   3e-73

>Medtr5g018600.1 | TPR domain protein | HC | chr5:6944048-6947851 |
           20130731
          Length = 455

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/212 (65%), Positives = 157/212 (74%), Gaps = 2/212 (0%)

Query: 1   MDKGTKAMKEDDFGEAAENFSRALEIRVANYGELAPECVNTYYKYGCALLYKAQEEADPL 60
           M+KG KAMKE+DFGEAA+N+SRALEIRVA+YGELAPECV+TYYKYGCALLYKAQEEADPL
Sbjct: 67  MEKGNKAMKENDFGEAADNYSRALEIRVAHYGELAPECVHTYYKYGCALLYKAQEEADPL 126

Query: 61  GDVPKKQEGSQHGSSKDESVKSTIXXXXXXXXXXXXXXXXQDIASNDQESAVDDESTKNY 120
           G VPKKQEGS HGS KDE VK  +                QD+ SN+QES VD+ S KN 
Sbjct: 127 GAVPKKQEGSPHGSDKDEPVKGAV--NAESSTASFASNVEQDVTSNNQESEVDNVSGKND 184

Query: 121 QXXXXXXXXXXXXXXXXXXXXXXXAWKMLDIARAIVEKQCVNTIEHVDILSTLAEISLER 180
           Q                       AWKMLD+ARAIVEKQ V+T+E VDILSTLA+++LER
Sbjct: 185 QEDDEDSDTEELAEGDEDESDLDLAWKMLDVARAIVEKQSVHTMEQVDILSTLADVALER 244

Query: 181 EEFENSLSDYQKALSILEQLVEPDDRYIANLN 212
           E+FE SLSDYQKALSILEQLVEPDDR IA++N
Sbjct: 245 EDFETSLSDYQKALSILEQLVEPDDRNIADIN 276