Miyakogusa Predicted Gene

Lj0g3v0217109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0217109.1 CUFF.14021.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g013920.1 | hypothetical protein | LC | chr7:4124440-41218...    60   3e-10

>Medtr7g013920.1 | hypothetical protein | LC | chr7:4124440-4121897
           | 20130731
          Length = 124

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 4/78 (5%)

Query: 42  SKIWLKSVLDS---AIINETPSSSPGVNLTSGFSDSEGQTTFPARGGKCWRVRESEVFSF 98
           SKI  K  + S   A   ETPSS  G+N   GF + EGQT  PA+GG  WRV+ESE  SF
Sbjct: 48  SKILSKETISSSHYAKSKETPSSF-GLNWMIGFGELEGQTMLPAKGGNFWRVKESEDLSF 106

Query: 99  GTTLRKKKYGSDSGFWRL 116
           GT    KK G D  F R+
Sbjct: 107 GTRFSTKKEGCDCEFGRV 124