Miyakogusa Predicted Gene

Lj0g3v0216769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0216769.1 Non Characterized Hit- tr|I3S6L3|I3S6L3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.7,0,Cysteine
proteinases,NULL; UBCTHYDRLASE,Peptidase C12, ubiquitin
carboxyl-terminal hydrolase 1; no d,CUFF.14004.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100360.1 | ubiquitin carboxyl-terminal hydrolase family p...   418   e-117
Medtr1g078300.1 | ubiquitin carboxyl-terminal hydrolase family p...    78   6e-15
Medtr1g078300.2 | ubiquitin carboxyl-terminal hydrolase family p...    69   3e-12

>Medtr4g100360.1 | ubiquitin carboxyl-terminal hydrolase family
           protein | HC | chr4:41362487-41368004 | 20130731
          Length = 235

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/233 (84%), Positives = 221/233 (94%), Gaps = 2/233 (0%)

Query: 1   MAATTSK--KRWLPLEANPDVMNQFLRGLGLPEDQAECYDVYGLDEELLEMVPKPVLAVL 58
           MA  +SK  KRWLPLEANPDVMNQFL GLGL E+QAEC+DVYGLD+ELLEMVPKPVLAVL
Sbjct: 1   MATPSSKSSKRWLPLEANPDVMNQFLSGLGLQENQAECHDVYGLDDELLEMVPKPVLAVL 60

Query: 59  FLYPLTAKSEEERLRQANEKQEYSNKVYFMKQTVGNACGTIGLLHALGNITSEVKFVEGS 118
           FLYPLT KSEEERL+Q NEK+EY+NKVYFMKQTVGNACGTIGLLHALGN+TSE+KFVE S
Sbjct: 61  FLYPLTTKSEEERLQQNNEKREYNNKVYFMKQTVGNACGTIGLLHALGNLTSEIKFVEES 120

Query: 119 FFDKFFKSTASLDPSQRAVFLENDREMEVAHSVPATAGDTEASDNVDTHFICFACIDGEL 178
           FFDKFFKSTA+LDP QRA+FLEND EMEVAHSV ATAGDTEA+D+V+THFIC+AC+DGEL
Sbjct: 121 FFDKFFKSTANLDPMQRALFLENDTEMEVAHSVAATAGDTEATDDVNTHFICYACVDGEL 180

Query: 179 YELDGRKSAPISHGPSSPSTLLRDASKAIQSMIKENPNSLNFNVIALSKKSSD 231
           YELDGRKSAPISHGPSSPSTLL+DA+KAIQSMI+++P+SLNFNVIA+SKKSSD
Sbjct: 181 YELDGRKSAPISHGPSSPSTLLKDAAKAIQSMIQKDPDSLNFNVIAISKKSSD 233


>Medtr1g078300.1 | ubiquitin carboxyl-terminal hydrolase family
           protein | HC | chr1:35057751-35062197 | 20130731
          Length = 334

 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 24/231 (10%)

Query: 10  WLPLEANPDVMNQFLRGLGLPEDQAECYDVYGLDEELLEMVPKPVLAVLFLYPLTAKSEE 69
           W  +E++P V  + ++ + +   Q E  ++Y LD + L  + +PV  ++FL+      ++
Sbjct: 3   WCTIESDPGVFTELIQQMQVKGVQVE--ELYSLDPDALNSL-RPVYGLIFLFKWRPGEKD 59

Query: 70  ERLRQANEKQEYSNKVYFMKQTVGNACGTIGLLHALGNITSEVKFVEGSFFDKFFKSTAS 129
           ER   A  K    N ++F  Q + NAC T  +L  L N + +V    G    K  + T +
Sbjct: 60  ER---AVIKDPNPN-LFFASQVINNACATQAILSILLN-SPDVDI--GPELTKLKEFTKN 112

Query: 130 LDPSQRAVFLENDREMEVAHS--------VPATAGDTEASDNVDTHFICFACIDGELYEL 181
             P  + + + N   +  AH+        VP         D+V  HFI +  +DG LYEL
Sbjct: 113 FPPELKGLAINNSDPIRAAHNSFARPEPFVPEEQKAATKDDDV-YHFISYLPVDGVLYEL 171

Query: 182 DGRKSAPISHGPSSPSTLLRDASKAIQSMIKE-----NPNSLNFNVIALSK 227
           DG K  PIS G  +      +  K +Q +I+E     + N + FN++A+ K
Sbjct: 172 DGLKEGPISLGQCAGGQGDMEWLKMVQPVIQERIERYSQNEIRFNLLAIVK 222


>Medtr1g078300.2 | ubiquitin carboxyl-terminal hydrolase family
           protein | HC | chr1:35057751-35062197 | 20130731
          Length = 315

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)

Query: 34  AECYDVYGLDEELLEMVPKPVLAVLFLYPLTAKSEEERLRQANEKQEYSNKVYFMKQTVG 93
            +  ++Y LD + L  + +PV  ++FL+      ++ER   A  K    N ++F  Q + 
Sbjct: 6   VQVEELYSLDPDALNSL-RPVYGLIFLFKWRPGEKDER---AVIKDPNPN-LFFASQVIN 60

Query: 94  NACGTIGLLHALGNITSEVKFVEGSFFDKFFKSTASLDPSQRAVFLENDREMEVAHS--- 150
           NAC T  +L  L N + +V    G    K  + T +  P  + + + N   +  AH+   
Sbjct: 61  NACATQAILSILLN-SPDVDI--GPELTKLKEFTKNFPPELKGLAINNSDPIRAAHNSFA 117

Query: 151 -----VPATAGDTEASDNVDTHFICFACIDGELYELDGRKSAPISHGPSSPSTLLRDASK 205
                VP         D+V  HFI +  +DG LYELDG K  PIS G  +      +  K
Sbjct: 118 RPEPFVPEEQKAATKDDDV-YHFISYLPVDGVLYELDGLKEGPISLGQCAGGQGDMEWLK 176

Query: 206 AIQSMIKE-----NPNSLNFNVIALSK 227
            +Q +I+E     + N + FN++A+ K
Sbjct: 177 MVQPVIQERIERYSQNEIRFNLLAIVK 203