Miyakogusa Predicted Gene
- Lj0g3v0216549.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0216549.1 tr|B9MV63|B9MV63_POPTR Chromatin remodeling
complex subunit (Fragment) OS=Populus trichocarpa
GN=CHR,40.74,1e-18,Helicase_C,Helicase, C-terminal; P-loop containing
nucleoside triphosphate hydrolases,NULL; HELICASE,CUFF.13975.1
(131 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g037345.1 | chromatin remodeling complex subunit | HC | ch... 252 7e-68
Medtr2g437480.1 | chromatin remodeling complex subunit | HC | ch... 249 4e-67
Medtr7g450790.1 | SNF2 family amine-terminal protein | LC | chr7... 89 8e-19
Medtr1g081750.1 | chromatin remodeling complex subunit | LC | ch... 89 1e-18
Medtr5g083300.2 | chromatin remodeling complex subunit | HC | ch... 88 2e-18
Medtr5g083300.3 | chromatin remodeling complex subunit | HC | ch... 88 2e-18
Medtr5g083300.1 | chromatin remodeling complex subunit | HC | ch... 88 2e-18
Medtr3g071860.1 | chromatin remodeling complex subunit | HC | ch... 88 2e-18
Medtr7g029525.1 | SNF2 family amine-terminal protein | LC | chr7... 88 2e-18
Medtr4g088650.1 | SNF2 family amine-terminal protein | LC | chr4... 88 2e-18
Medtr7g026650.1 | chromatin remodeling complex subunit | LC | ch... 87 3e-18
Medtr7g050445.1 | SNF2 family amine-terminal protein | HC | chr7... 83 6e-17
Medtr7g450820.1 | SNF2 family amine-terminal protein | LC | chr7... 81 2e-16
Medtr7g450780.1 | SNF2 family amine-terminal protein | LC | chr7... 81 3e-16
Medtr7g450860.1 | SNF2 family amine-terminal protein | LC | chr7... 79 8e-16
Medtr4g078495.1 | DNA repair and recombination RAD26-like protei... 71 3e-13
Medtr4g078460.1 | DNA repair and recombination RAD26-like protei... 71 3e-13
Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731 67 6e-12
Medtr2g084695.1 | chromatin remodeling complex subunit | LC | ch... 66 1e-11
Medtr5g004720.1 | DNA repair and recombination RAD54-like protei... 63 8e-11
Medtr4g096930.1 | chromatin remodeling complex subunit | HC | ch... 62 2e-10
Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415... 62 2e-10
Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC | ... 62 2e-10
Medtr1g069755.1 | DNA repair and recombination protein RAD26 | H... 60 4e-10
Medtr1g115215.2 | chromatin remodeling protein | HC | chr1:51892... 60 4e-10
Medtr1g115215.1 | chromatin remodeling protein | HC | chr1:51892... 60 4e-10
Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405... 60 5e-10
Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314... 60 6e-10
Medtr1g035330.1 | ATP-dependent helicase family protein | HC | c... 60 6e-10
Medtr7g090960.1 | DNA helicase INO80-like protein | HC | chr7:35... 59 8e-10
Medtr7g090960.2 | DNA helicase INO80-like protein | HC | chr7:35... 59 8e-10
Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC | c... 58 2e-09
Medtr1g080420.2 | chromatin remodeling complex subunit | HC | ch... 58 2e-09
Medtr1g080420.3 | chromatin remodeling complex subunit | HC | ch... 58 2e-09
Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr1g080420.1 | chromatin remodeling complex subunit | HC | ch... 58 2e-09
Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle p... 58 2e-09
Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle p... 58 3e-09
Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle p... 58 3e-09
Medtr8g094070.2 | chromatin-remodeling complex ATPase chain | HC... 58 3e-09
Medtr8g094070.1 | chromatin-remodeling complex ATPase chain | HC... 58 3e-09
Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC... 57 5e-09
Medtr4g118720.1 | SNF2 family amine-terminal protein | HC | chr4... 57 5e-09
Medtr5g020000.1 | chromatin-remodeling complex ATPase chain, put... 55 2e-08
Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166... 54 4e-08
Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC... 53 7e-08
Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC... 53 7e-08
Medtr3g053910.1 | chromodomain helicase DNA-binding protein, put... 52 2e-07
Medtr3g053910.3 | chromodomain helicase DNA-binding protein, put... 52 2e-07
Medtr3g053910.4 | chromodomain helicase DNA-binding protein, put... 52 2e-07
Medtr3g053910.2 | chromodomain helicase DNA-binding protein, put... 52 2e-07
Medtr7g078090.1 | ATP-dependent helicase BRM | HC | chr7:2951348... 50 6e-07
>Medtr8g037345.1 | chromatin remodeling complex subunit | HC |
chr8:13958611-13951546 | 20130731
Length = 929
Score = 252 bits (643), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 116/130 (89%), Positives = 123/130 (94%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
ME+FNNSP+AK+FFGSIKACGEGISLVGASRV+ILDVHLNPSVTRQAIGRAFRPGQ KKV
Sbjct: 763 MEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKV 822
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPM 120
FVYRLIAADSPEEEDH T FKKELISKMWFEWNEYCGDRAF+VET KECGDLFL SP+
Sbjct: 823 FVYRLIAADSPEEEDHHTCFKKELISKMWFEWNEYCGDRAFEVETLDVKECGDLFLESPL 882
Query: 121 LGEDIKALYK 130
LGED+KALYK
Sbjct: 883 LGEDVKALYK 892
>Medtr2g437480.1 | chromatin remodeling complex subunit | HC |
chr2:14725811-14732214 | 20130731
Length = 1042
Score = 249 bits (637), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 113/131 (86%), Positives = 123/131 (93%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
ME+FNNSP+AK+FFGSIKACGEGISLVGASRV+ILDVHLNPSVTRQAIGRAFRPGQ +KV
Sbjct: 912 MEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKRKV 971
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPM 120
FVYRLIAADSPEEEDH T KKELISKMWFEWNEYCGD+AF+VET KECGD+FL SP+
Sbjct: 972 FVYRLIAADSPEEEDHSTCVKKELISKMWFEWNEYCGDKAFEVETVDVKECGDMFLESPL 1031
Query: 121 LGEDIKALYKR 131
LGED+KALYKR
Sbjct: 1032 LGEDVKALYKR 1042
>Medtr7g450790.1 | SNF2 family amine-terminal protein | LC |
chr7:16978598-16973394 | 20130731
Length = 1439
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
AKV S KAC EGISLVGASRV++LDV NPSV RQAI RA+R GQ K V+ Y L+A
Sbjct: 1309 AKVLLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRIGQKKVVYTYHLLAEG 1368
Query: 70 SPEEEDHITSFKKELISKMWF 90
+ EEE + +K+ +S++ F
Sbjct: 1369 TTEEEKYGKQAEKDRLSELVF 1389
>Medtr1g081750.1 | chromatin remodeling complex subunit | LC |
chr1:36372091-36376631 | 20130731
Length = 1116
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%)
Query: 9 DAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAA 68
D+K+ SI AC EGISL ASRV+ LD NPS T+QAI RAFRPGQ K V+VY L+
Sbjct: 990 DSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQEKMVYVYHLLMT 1049
Query: 69 DSPEEEDHITSFKKELISKMWF 90
S EE+ + + KE +S M F
Sbjct: 1050 GSMEEDKYRRTTWKEWVSCMIF 1071
>Medtr5g083300.2 | chromatin remodeling complex subunit | HC |
chr5:35965449-35957801 | 20130731
Length = 1305
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
+K+ SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L+
Sbjct: 1179 SKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTG 1238
Query: 70 SPEEEDHITSFKKELISKMWF 90
S EE+ + + KE +S M F
Sbjct: 1239 SLEEDKYRRTTWKEWVSSMIF 1259
>Medtr5g083300.3 | chromatin remodeling complex subunit | HC |
chr5:35965449-35957801 | 20130731
Length = 1305
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
+K+ SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L+
Sbjct: 1179 SKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTG 1238
Query: 70 SPEEEDHITSFKKELISKMWF 90
S EE+ + + KE +S M F
Sbjct: 1239 SLEEDKYRRTTWKEWVSSMIF 1259
>Medtr5g083300.1 | chromatin remodeling complex subunit | HC |
chr5:35963678-35957833 | 20130731
Length = 1342
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
+K+ SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L+
Sbjct: 1216 SKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTG 1275
Query: 70 SPEEEDHITSFKKELISKMWF 90
S EE+ + + KE +S M F
Sbjct: 1276 SLEEDKYRRTTWKEWVSSMIF 1296
>Medtr3g071860.1 | chromatin remodeling complex subunit | HC |
chr3:32254412-32248878 | 20130731
Length = 1267
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 56/86 (65%)
Query: 5 NNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYR 64
+ S +K+ SI AC EGISL ASRV+ LD NPS T+QAI RAFRPGQ K V+VY+
Sbjct: 1137 DQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQ 1196
Query: 65 LIAADSPEEEDHITSFKKELISKMWF 90
L+ S EE+ + + KE +S M F
Sbjct: 1197 LLTTGSMEEDKYRRTTWKEWVSCMIF 1222
>Medtr7g029525.1 | SNF2 family amine-terminal protein | LC |
chr7:10600743-10605174 | 20130731
Length = 1324
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 57/81 (70%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
AKV S KAC EGISLVGASRV++LDV NPSV RQAI RA+R GQ + V+ Y L+A
Sbjct: 1194 AKVLLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRIGQKRVVYTYHLLAEG 1253
Query: 70 SPEEEDHITSFKKELISKMWF 90
+ EEE + +K+ +S++ F
Sbjct: 1254 TTEEEKYGKQAEKDRLSELVF 1274
>Medtr4g088650.1 | SNF2 family amine-terminal protein | LC |
chr4:35262164-35266682 | 20130731
Length = 1218
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 57/81 (70%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
AKV S KAC EGISLVGASRV++LDV NPSV RQAI RA+R GQ + V+ Y L+A
Sbjct: 1088 AKVLLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRIGQKRVVYTYHLLAEG 1147
Query: 70 SPEEEDHITSFKKELISKMWF 90
+ EEE + +K+ +S++ F
Sbjct: 1148 TTEEEKYGKQAEKDRLSELVF 1168
>Medtr7g026650.1 | chromatin remodeling complex subunit | LC |
chr7:8847597-8843334 | 20130731
Length = 1181
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
+K+ SI AC EGISL ASRV+ LD NPS T+QAI RAFRPGQ K V+VY+L+
Sbjct: 1028 SKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTG 1087
Query: 70 SPEEEDHITSFKKELISKMWF 90
S EE+ + KE +S M F
Sbjct: 1088 SMEEDKFRKTTWKEWVSSMIF 1108
>Medtr7g050445.1 | SNF2 family amine-terminal protein | HC |
chr7:16825131-16820145 | 20130731
Length = 1303
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
+ FN+ + AK+ S AC EGISLVGASRV++LDV NPSV RQAI RA+R GQ K
Sbjct: 1162 IHSFNDANSQAKILLASTNACSEGISLVGASRVVLLDVVWNPSVDRQAISRAYRIGQKKV 1221
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWF 90
V+ Y L+ + E+ H +K +S++ F
Sbjct: 1222 VYTYHLLTEGTAEKIKHRKQAEKHRLSELVF 1252
>Medtr7g450820.1 | SNF2 family amine-terminal protein | LC |
chr7:16993181-16988673 | 20130731
Length = 1239
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
+ FN+ + +K+ S +AC EGISLVGASRV++LDV NPSV +QAI RA+R GQ K
Sbjct: 1096 INNFNDANSQSKILLASTRACSEGISLVGASRVVLLDVEWNPSVEKQAISRAYRIGQKKV 1155
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWF 90
V+ Y L+ + E + + +K +S++ F
Sbjct: 1156 VYTYHLLTQGTKECDKYCKQAEKHRLSELVF 1186
>Medtr7g450780.1 | SNF2 family amine-terminal protein | LC |
chr7:16969460-16964457 | 20130731
Length = 1351
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
AK+ S +AC EGISLVGASRV++LDV NPSV RQA+ RA+R GQ + V+ Y L+
Sbjct: 1218 AKILLASTRACSEGISLVGASRVVLLDVVWNPSVERQAVSRAYRIGQKRVVYTYHLLTEG 1277
Query: 70 SPEEEDHITSFKKELISKMWF 90
+ E + +K+ +S++ F
Sbjct: 1278 TTEHLKYFKQSEKDRLSELVF 1298
>Medtr7g450860.1 | SNF2 family amine-terminal protein | LC |
chr7:17008895-17004222 | 20130731
Length = 1276
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++ FN+ + AK+ + K C EGISLVGASRV++LDV NPSV +QAI RA+R GQ K
Sbjct: 1134 IDTFNDENSQAKILLATTKTCSEGISLVGASRVVLLDVVWNPSVEKQAISRAYRIGQKKV 1193
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWF 90
V+ Y L+ + E + KK+ +S++ F
Sbjct: 1194 VYTYHLLTEGTRECDKFRKQAKKDRLSELVF 1224
>Medtr4g078495.1 | DNA repair and recombination RAD26-like protein,
putative | HC | chr4:30318621-30324652 | 20130731
Length = 872
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN+SP +VF S +A G G++LV A+RV+I D + NPS QA R+FR GQ + V
Sbjct: 580 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHV 639
Query: 61 FVYRLIAADSPEEEDHITSFKKELIS---------KMWFEWNEYCGDRAFQVE 104
V+RL++A S EE + K+ +S K +FE + C +AFQ E
Sbjct: 640 VVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDC--KAFQGE 690
>Medtr4g078460.1 | DNA repair and recombination RAD26-like protein,
putative | HC | chr4:30287232-30295639 | 20130731
Length = 1158
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN+SP +VF S +A G G++LV A+RV+I D + NPS QA R+FR GQ + V
Sbjct: 866 VDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPSQDLQAQDRSFRYGQKRHV 925
Query: 61 FVYRLIAADSPEEEDHITSFKKELIS---------KMWFEWNEYCGDRAFQVE 104
V+RL++A S EE + K+ +S K +FE + C +AFQ E
Sbjct: 926 VVFRLLSAGSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDC--KAFQGE 976
>Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731
Length = 2044
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
M+RFN +P +F S ++ G GI+LVGA V+ D NP++ +QA R R GQT++V
Sbjct: 1121 MQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1180
Query: 61 FVYRLIAADSPEE 73
+YRLI+ + EE
Sbjct: 1181 HIYRLISESTIEE 1193
>Medtr2g084695.1 | chromatin remodeling complex subunit | LC |
chr2:35925608-35924218 | 20130731
Length = 290
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFR 53
KV S KAC EGISLVGASRV++LDV NPSV RQAI RA+R
Sbjct: 197 TKVLLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYR 240
>Medtr5g004720.1 | DNA repair and recombination RAD54-like protein |
HC | chr5:103589-93910 | 20130731
Length = 945
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 7 SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLI 66
S D VF S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+V++YR +
Sbjct: 605 SKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFL 664
Query: 67 AADSPEEEDHITSFKKELISKM 88
+A + EE+ + KE + K+
Sbjct: 665 SAGTIEEKVYQRQMAKEGLQKV 686
>Medtr4g096930.1 | chromatin remodeling complex subunit | HC |
chr4:38597416-38612562 | 20130731
Length = 2317
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 3 RFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFV 62
RFN VF S ++CG GI+L A V+I D NP QA+ RA R GQ+ ++ V
Sbjct: 1112 RFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLV 1171
Query: 63 YRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLF 115
YRL+ S EE + KK ++ D+ F+ ++ S KE D+
Sbjct: 1172 YRLVVRASVEERILQLAKKKLML------------DQLFKGKSGSQKEVEDIL 1212
>Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415500
| 20130731
Length = 935
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
+++F + PD K+F S+KA G ++L AS V ++D NP+V RQA R R GQ K +
Sbjct: 825 IKKFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPI 884
Query: 61 FVYRLIAADSPEEEDHITSFKKELI 85
+ R + ++ EE KKEL+
Sbjct: 885 RIVRFVIENTIEERILKLQEKKELV 909
>Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC |
chr2:3311076-3321817 | 20130731
Length = 1303
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
FN P+ V S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V V
Sbjct: 1194 FNTLPEVSVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVL 1253
Query: 64 RLIAADSPEE 73
RL D+ E+
Sbjct: 1254 RLTVKDTVED 1263
>Medtr1g069755.1 | DNA repair and recombination protein RAD26 | HC |
chr1:30420894-30427365 | 20130731
Length = 1215
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
M+ FN S + VF + K G G +L GA RV+I D NPS QA RA+R GQ + V
Sbjct: 794 MDEFNASSEIFVFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRIGQKRDV 853
Query: 61 FVYRLIAADSPEEE 74
+YRLI + EE+
Sbjct: 854 TIYRLITRGTIEEK 867
>Medtr1g115215.2 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
FN P+ V S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V
Sbjct: 931 FNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVT 990
Query: 64 RLIAADSPEEEDHITSFKKE 83
R+ D+ ED I + ++E
Sbjct: 991 RITIKDT--VEDRILALQEE 1008
>Medtr1g115215.1 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
FN P+ V S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V V
Sbjct: 931 FNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVT 990
Query: 64 RLIAADSPEEEDHITSFKKE 83
R+ D+ ED I + ++E
Sbjct: 991 RITIKDT--VEDRILALQEE 1008
>Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405 |
20130731
Length = 1025
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
+++F+ D +V S+KA G GI+L AS ++D NP+V QA+ R R GQTKKV
Sbjct: 918 IKQFSEDSDIQVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKV 977
Query: 61 FVYRLIAADSPEEE-DHITSFKKELIS 86
+ R I S E+ + + + K+ +IS
Sbjct: 978 AIKRFIVKGSVEQRMEAVQARKQRMIS 1004
>Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314 |
20130731
Length = 1022
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
+++F+ D +V S+KA G GI+L AS ++D NP+V QA+ R R GQTKKV
Sbjct: 915 IKQFSEDSDIQVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKV 974
Query: 61 FVYRLIAADSPEEE-DHITSFKKELIS 86
+ R I S E+ + + + K+ +IS
Sbjct: 975 AIKRFIVKGSVEQRMEAVQARKQRMIS 1001
>Medtr1g035330.1 | ATP-dependent helicase family protein | HC |
chr1:12827792-12817494 | 20130731
Length = 745
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FNN S +A G+G++L GA V+I D+ NP + RQA R R GQTK V
Sbjct: 629 VDTFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTKPV 688
Query: 61 FVYRLIAADSPEE 73
VYRL+ + +E
Sbjct: 689 TVYRLVTKGTVDE 701
>Medtr7g090960.1 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1514
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
F + D VF S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VY
Sbjct: 1254 FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY 1313
Query: 64 RLIAADSPEEEDHITSFKKELISKMWFEWNEYCGD 98
RLI ++ EE+ + + +K + + GD
Sbjct: 1314 RLICKETVEEKILLRASQKSTVQNLVMTGGSVGGD 1348
>Medtr7g090960.2 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1433
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
F + D VF S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VY
Sbjct: 1173 FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY 1232
Query: 64 RLIAADSPEEEDHITSFKKELISKMWFEWNEYCGD 98
RLI ++ EE+ + + +K + + GD
Sbjct: 1233 RLICKETVEEKILLRASQKSTVQNLVMTGGSVGGD 1267
>Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC |
chr1:16509136-16515621 | 20130731
Length = 1153
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN + + +V S+KA G G++L AS V ++D NP+V QAI R R GQ ++V
Sbjct: 1046 LKEFNETKEKRVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRRV 1105
Query: 61 FVYRLIAADSPEEE-DHITSFKKELIS 86
V R I + E+ + + K+++IS
Sbjct: 1106 TVRRFIVKGTVEDRLQQVQAKKQKMIS 1132
>Medtr1g080420.2 | chromatin remodeling complex subunit | HC |
chr1:35753109-35726804 | 20130731
Length = 1338
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MERFNNSPDAKV--FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTK 58
+ERFN + +V S +A GI+L A+RV+I+D NP+ QAI RA+R GQ K
Sbjct: 1054 VERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKK 1113
Query: 59 KVFVYRLIAADSPEEEDHITSFKKE 83
VF YRL+A + EE+ + KE
Sbjct: 1114 PVFAYRLLAHGTMEEKIYKRQVTKE 1138
>Medtr1g080420.3 | chromatin remodeling complex subunit | HC |
chr1:35753109-35726804 | 20130731
Length = 1338
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MERFNNSPDAKV--FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTK 58
+ERFN + +V S +A GI+L A+RV+I+D NP+ QAI RA+R GQ K
Sbjct: 1054 VERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKK 1113
Query: 59 KVFVYRLIAADSPEEEDHITSFKKE 83
VF YRL+A + EE+ + KE
Sbjct: 1114 PVFAYRLLAHGTMEEKIYKRQVTKE 1138
>Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr1g080420.1 | chromatin remodeling complex subunit | HC |
chr1:35761109-35726804 | 20130731
Length = 1469
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 1 MERFNNSPDAKV--FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTK 58
+ERFN + +V S +A GI+L A+RV+I+D NP+ QAI RA+R GQ K
Sbjct: 1185 VERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKK 1244
Query: 59 KVFVYRLIAADSPEEEDHITSFKKE 83
VF YRL+A + EE+ + KE
Sbjct: 1245 PVFAYRLLAHGTMEEKIYKRQVTKE 1269
>Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 669 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRLGQTNK 728
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 729 VLIYRLITRGTIEE 742
>Medtr8g094070.2 | chromatin-remodeling complex ATPase chain | HC |
chr8:39349649-39359572 | 20130731
Length = 1050
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F + A +F + + G G++L A RV+++D NPS Q++ RA+R GQ K V
Sbjct: 800 VDDFQDGVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV 859
Query: 61 FVYRLIAADSPEEE 74
VYRL+ + + EE+
Sbjct: 860 IVYRLMTSGTVEEK 873
>Medtr8g094070.1 | chromatin-remodeling complex ATPase chain | HC |
chr8:39349649-39359572 | 20130731
Length = 1095
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F + A +F + + G G++L A RV+++D NPS Q++ RA+R GQ K V
Sbjct: 800 VDDFQDGVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDV 859
Query: 61 FVYRLIAADSPEEE 74
VYRL+ + + EE+
Sbjct: 860 IVYRLMTSGTVEEK 873
>Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC |
chr1:2920951-2909567 | 20130731
Length = 1302
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN ++ F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 667 IDRFNAEDSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRVGQTNK 726
Query: 60 VFVYRLIAADSPEE 73
V ++RLI + EE
Sbjct: 727 VLIFRLITRGTIEE 740
>Medtr4g118720.1 | SNF2 family amine-terminal protein | HC |
chr4:49190490-49169826 | 20130731
Length = 3282
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N PD+ +F SI+A G G++L A V++ D NP V QA RA R GQ K V V
Sbjct: 1387 NKPDSPYFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVL 1446
Query: 64 RLIAADSPEEE-----DHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLAS 118
R + EE+ +H + I+ +F+ N DR +E+ +EC A+
Sbjct: 1447 RFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESL-LRECKK-EEAA 1504
Query: 119 PMLGED 124
P+L +D
Sbjct: 1505 PVLEDD 1510
>Medtr5g020000.1 | chromatin-remodeling complex ATPase chain,
putative | HC | chr5:7592986-7599103 | 20130731
Length = 750
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1 MERFNNSP-DAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++ FN++ + ++F S +A G GI+L A ++ D NP + QA+ R R GQTK
Sbjct: 565 IQDFNDTTSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKP 624
Query: 60 VFVYRLIAADSPE 72
V VYRL A S E
Sbjct: 625 VHVYRLATAQSVE 637
>Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166 |
20130731
Length = 822
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
+ S++A GI+L ASRV +++ NP+V QA+ R R GQ ++V + RLIA +S
Sbjct: 722 ILLASLRASSTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSI 781
Query: 72 EEEDHITSFKKE 83
EE+ + KK+
Sbjct: 782 EEKILMLQEKKK 793
>Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39200089 | 20130731
Length = 1383
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
ME FN D F S +A G GI+L A V+I D NP QA+ RA R GQ
Sbjct: 992 MEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDV 1051
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1052 VNIYRFVTSKSV-EEDILERAKKKMV 1076
>Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39198108 | 20130731
Length = 1563
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
ME FN D F S +A G GI+L A V+I D NP QA+ RA R GQ
Sbjct: 992 MEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDV 1051
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1052 VNIYRFVTSKSV-EEDILERAKKKMV 1076
>Medtr3g053910.1 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16763046-16784207 | 20130731
Length = 1739
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
M+ FN D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 975 MDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREV 1034
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1035 VNIYRFVTSKSV-EEDILERAKKKMV 1059
>Medtr3g053910.3 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1739
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
M+ FN D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 975 MDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREV 1034
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1035 VNIYRFVTSKSV-EEDILERAKKKMV 1059
>Medtr3g053910.4 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761487-16784695 | 20130731
Length = 1710
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
M+ FN D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 946 MDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREV 1005
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1006 VNIYRFVTSKSV-EEDILERAKKKMV 1030
>Medtr3g053910.2 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1710
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
M+ FN D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 946 MDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREV 1005
Query: 60 VFVYRLIAADSPEEEDHITSFKKELI 85
V +YR + + S EED + KK+++
Sbjct: 1006 VNIYRFVTSKSV-EEDILERAKKKMV 1030
>Medtr7g078090.1 | ATP-dependent helicase BRM | HC |
chr7:29513485-29525029 | 20130731
Length = 2224
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
NSP++ +F SI+A G G++L A V+I D NP QA+ RA R GQ ++V V
Sbjct: 1384 NSPNSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVI 1443
Query: 64 RLIAADSPEEEDHITSFKKE 83
+ A D I+S +KE
Sbjct: 1444 YMEAV-----VDKISSHQKE 1458