Miyakogusa Predicted Gene

Lj0g3v0215559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0215559.1 Non Characterized Hit- tr|A5AVY9|A5AVY9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.21,7e-19,UBN2_3,NULL; seg,NULL,CUFF.13896.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g072160.1 | hypothetical protein | LC | chr6:28019617-2802...    62   4e-10
Medtr5g007160.1 | hypothetical protein | LC | chr5:1226844-12262...    59   7e-09
Medtr7g039280.1 | hypothetical protein | LC | chr7:14583454-1458...    54   1e-07
Medtr4g048330.1 | hypothetical protein | LC | chr4:17127732-1712...    53   3e-07

>Medtr6g072160.1 | hypothetical protein | LC |
           chr6:28019617-28020512 | 20130731
          Length = 166

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 38/137 (27%)

Query: 1   MWRSLKTKNKHGFVDGSLPKPAADDPLFGVWDRCNTLVISWLTQAMDPVIAQNILWMDLA 60
           M R+L  K+K  F+DGS+P P                                    DL 
Sbjct: 1   MQRALGAKSKLAFIDGSMPIP------------------------------------DL- 23

Query: 61  SEIWADLKSRYYQGDLFRISDLQEELYSLKQGDMPITTYFTRLKSLWQELEAFRPIPSCT 120
           +++  D  S   + D  R+  L+  + +LKQG      YF +++SLW EL   RPIP+CT
Sbjct: 24  TKVCHDTSSSA-KFDRIRVFSLRSAINNLKQGIKSALEYFIKVRSLWDELNFDRPIPNCT 82

Query: 121 CAVSCTCDLIPIVKSYR 137
           C   CT D I + K+YR
Sbjct: 83  CIHPCTFDSIHVAKNYR 99


>Medtr5g007160.1 | hypothetical protein | LC | chr5:1226844-1226222
           | 20130731
          Length = 176

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 31/46 (67%)

Query: 103 LKSLWQELEAFRPIPSCTCAVSCTCDLIPIVKSYRDSDYVIRFLKG 148
           +K LW ELE  RP PSC+C   CTC L   V +Y++ +Y+I FLKG
Sbjct: 1   MKILWYELEDLRPTPSCSCVNPCTCSLSNYVHNYKNMEYIICFLKG 46


>Medtr7g039280.1 | hypothetical protein | LC |
           chr7:14583454-14584237 | 20130731
          Length = 227

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 103 LKSLWQELEAFRPIPSCTCAVSCTCDLIPIVKSYRDSDYVIRFLKGXXXHI-LQREKEIV 161
           +KSLW+EL + RPIP+C C   C C    + K +R+ D +++FL G      + R + ++
Sbjct: 1   MKSLWEELSSHRPIPNCACVHPCRCASSKVAKIHRNEDQIMQFLTGLNDQFSVVRTQVLL 60

Query: 162 VDMLQKSVVFVSGLVIQLITVTRNMGTLLISR 193
           VD L  S+  V  LV+Q  +   ++  L +S 
Sbjct: 61  VDPL-PSLNKVYSLVVQEESNNASITQLSVSE 91


>Medtr4g048330.1 | hypothetical protein | LC |
           chr4:17127732-17129246 | 20130731
          Length = 422

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 32/52 (61%)

Query: 97  TTYFTRLKSLWQELEAFRPIPSCTCAVSCTCDLIPIVKSYRDSDYVIRFLKG 148
           +T   ++KSLW+EL + RP+  CTC   C C+ +   + +R  D VI+FL G
Sbjct: 77  STILNKMKSLWEELNSHRPMHVCTCPYPCRCESMRAAREFRMEDQVIQFLTG 128