Miyakogusa Predicted Gene

Lj0g3v0214949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0214949.1 Non Characterized Hit- tr|I1L305|I1L305_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.85,0.0000000000002,seg,NULL,CUFF.13845.1
         (47 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g051860.1 | DUF21 domain plant protein | HC | chr6:1805803...    53   6e-08

>Medtr6g051860.1 | DUF21 domain plant protein | HC |
           chr6:18058032-18052428 | 20130731
          Length = 423

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/47 (53%), Positives = 27/47 (57%)

Query: 1   MEEYEFPCCEGNFWLFLITCLVIVXXXXXXXXXXXXXXXFSQVDLEV 47
           M EYEFPCC  +FWLFL  CLVIV               +SQVDLEV
Sbjct: 68  MHEYEFPCCGLDFWLFLTICLVIVLLAGITSGLALGILSYSQVDLEV 114