Miyakogusa Predicted Gene

Lj0g3v0214939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0214939.1 Non Characterized Hit- tr|I1LXN3|I1LXN3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,41.67,0.0000000000002, ,CUFF.13844.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g051840.1 | DUF21 domain plant protein, putative | HC | ch...   102   1e-22
Medtr6g052300.1 | CBS domain protein | HC | chr6:18250241-182568...    53   5e-08

>Medtr6g051840.1 | DUF21 domain plant protein, putative | HC |
           chr6:18050464-18049156 | 20130731
          Length = 135

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 1/87 (1%)

Query: 39  GESDSSFILEMSPRGSIYESTLSSSDVEFHSLTLKNLMIPDDELQESKQWEQEGRYASQE 98
            ES+SS++LEMS R SI EST+ SSDVEF S TL+N+M+ D+E+ ESK WEQE    S E
Sbjct: 8   AESNSSYVLEMSQRSSIQESTMCSSDVEFLSPTLENVMVLDNEV-ESKTWEQEIGCMSHE 66

Query: 99  QMESLAAIVDEEVIGIITMEDVMEELL 125
           Q+ SL+A+  EE IGIITMEDVMEELL
Sbjct: 67  QIVSLSAVTHEEAIGIITMEDVMEELL 93


>Medtr6g052300.1 | CBS domain protein | HC | chr6:18250241-18256861
           | 20130731
          Length = 476

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 32/130 (24%)

Query: 1   MAVVLKGNKDIPKSASDSVDTPPIL-YNTHKISNQAQITGESDSSFILEMSPRGSIYEST 59
           MAVVLK  ++I  +A+++    P L ++   IS +A                      S 
Sbjct: 308 MAVVLKSKENIRTAATNTEGFGPFLPHDYISISTEA----------------------SN 345

Query: 60  LSSSDVEFHSLTLKNLMIPD----DELQESKQWEQEGRYASQEQMESLAAIVDEEVIGII 115
             S   E++S TLKN M+ +    D L  SKQ +      S E MESL    +EEV+GII
Sbjct: 346 WQSEGSEYYSATLKNAMLQESKDSDPLHRSKQHDTS---ISLENMESLLG--EEEVVGII 400

Query: 116 TMEDVMEELL 125
           T+EDVMEELL
Sbjct: 401 TLEDVMEELL 410