Miyakogusa Predicted Gene

Lj0g3v0214309.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0214309.1 tr|B9HTE2|B9HTE2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_658207 PE=4 SV=1,34.48,0.000005,
,CUFF.13800.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086090.2 | TPX2 (targeting protein for Xklp2) family prot...   128   1e-30
Medtr3g086090.1 | TPX2 (targeting protein for Xklp2) family prot...   128   1e-30
Medtr3g086090.3 | TPX2 (targeting protein for Xklp2) family prot...   128   1e-30

>Medtr3g086090.2 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr3:38946514-38950101 | 20130731
          Length = 690

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)

Query: 3   EIKPKEEEKVQLQRIPKGKAEHDHKKLQQSGGSKFKLNEDGSSGTQSSTKQVRKVSLTMS 62
           E KPKEEEKVQL RI KGK EH HKKL QS GSK K  +DG SG QS + Q+RK+S TM 
Sbjct: 569 ETKPKEEEKVQL-RISKGKTEHTHKKLPQSSGSKSKPIDDGPSGAQSPSNQIRKISFTMP 627

Query: 63  GPPKPDGKASSSTVQDKTIGSSWKPPINTNSSKRITEKVNRTTKQSRTSSNTTRENASPN 122
             P+   +A+SS+   K IG+SWKPPI+TNSSKRITEK +RT +   + S  T ENASPN
Sbjct: 628 RSPRQVRQANSSSSTTKNIGNSWKPPISTNSSKRITEKNSRTRQSGTSLSKATWENASPN 687

Query: 123 IQN 125
           IQ+
Sbjct: 688 IQH 690


>Medtr3g086090.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr3:38945994-38950499 | 20130731
          Length = 709

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)

Query: 3   EIKPKEEEKVQLQRIPKGKAEHDHKKLQQSGGSKFKLNEDGSSGTQSSTKQVRKVSLTMS 62
           E KPKEEEKVQL RI KGK EH HKKL QS GSK K  +DG SG QS + Q+RK+S TM 
Sbjct: 588 ETKPKEEEKVQL-RISKGKTEHTHKKLPQSSGSKSKPIDDGPSGAQSPSNQIRKISFTMP 646

Query: 63  GPPKPDGKASSSTVQDKTIGSSWKPPINTNSSKRITEKVNRTTKQSRTSSNTTRENASPN 122
             P+   +A+SS+   K IG+SWKPPI+TNSSKRITEK +RT +   + S  T ENASPN
Sbjct: 647 RSPRQVRQANSSSSTTKNIGNSWKPPISTNSSKRITEKNSRTRQSGTSLSKATWENASPN 706

Query: 123 IQN 125
           IQ+
Sbjct: 707 IQH 709


>Medtr3g086090.3 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr3:38945994-38950504 | 20130731
          Length = 688

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)

Query: 3   EIKPKEEEKVQLQRIPKGKAEHDHKKLQQSGGSKFKLNEDGSSGTQSSTKQVRKVSLTMS 62
           E KPKEEEKVQL RI KGK EH HKKL QS GSK K  +DG SG QS + Q+RK+S TM 
Sbjct: 567 ETKPKEEEKVQL-RISKGKTEHTHKKLPQSSGSKSKPIDDGPSGAQSPSNQIRKISFTMP 625

Query: 63  GPPKPDGKASSSTVQDKTIGSSWKPPINTNSSKRITEKVNRTTKQSRTSSNTTRENASPN 122
             P+   +A+SS+   K IG+SWKPPI+TNSSKRITEK +RT +   + S  T ENASPN
Sbjct: 626 RSPRQVRQANSSSSTTKNIGNSWKPPISTNSSKRITEKNSRTRQSGTSLSKATWENASPN 685

Query: 123 IQN 125
           IQ+
Sbjct: 686 IQH 688