Miyakogusa Predicted Gene

Lj0g3v0213659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213659.1 tr|G7IK10|G7IK10_MEDTR Separin OS=Medicago
truncatula GN=MTR_2g007790 PE=4 SV=1,53.19,0.000000000000002,
,CUFF.13744.1
         (88 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g023120.1 | separase-like protein | HC | chr7:7542344-7556...   110   3e-25
Medtr2g007790.1 | separase-like protein | HC | chr2:1122273-1141...    87   4e-18

>Medtr7g023120.1 | separase-like protein | HC |
          chr7:7542344-7556201 | 20130731
          Length = 2148

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/93 (67%), Positives = 75/93 (80%), Gaps = 6/93 (6%)

Query: 1  MASPSPTEASLISKLQSSDSTGIHALVSDYLRPFSDLN--NSNSNQTLIRSLAKRFLPFL 58
          MASP  TE++LISKL++SDS GI+ALVSDYLRPFSD+N  +SN++QTLIR LAK F+ F+
Sbjct: 1  MASP-LTESTLISKLETSDSPGIYALVSDYLRPFSDINSPSSNNDQTLIRQLAKHFISFI 59

Query: 59 NTSLSILPKRLPRISTN---LIDEFFLVYSLCL 88
          NTSLSILPKRLP IS +   LI E F  Y LCL
Sbjct: 60 NTSLSILPKRLPGISKSNEVLILELFKTYFLCL 92


>Medtr2g007790.1 | separase-like protein | HC |
          chr2:1122273-1141362 | 20130731
          Length = 2182

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 10/94 (10%)

Query: 5  SPTEASLISKLQSSDSTGIHALVSDYLRPFSDLNNSNS--NQTLIRSLAKRFLPFLNTSL 62
          S TE SL+SKL+SSDSTGI+ALVS+YLRPFS++ +S+S  N TLIR L K+F  F+  S+
Sbjct: 3  SSTEQSLLSKLESSDSTGIYALVSEYLRPFSNIKSSSSTNNVTLIRQLTKQFFHFIKKSV 62

Query: 63 SILPKRLPRI--------STNLIDEFFLVYSLCL 88
          SILPKR+P +        +  LI E    Y LC 
Sbjct: 63 SILPKRIPELFNSEIPNSNYALITELCKTYLLCF 96