Miyakogusa Predicted Gene
- Lj0g3v0213429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0213429.1 Non Characterized Hit- tr|I1JY03|I1JY03_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46001
PE,88.57,0.0000000008,Copine,Copine,CUFF.13726.1
(46 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 67 3e-12
Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 67 3e-12
Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 67 3e-12
Medtr2g063843.1 | calcium-dependent phospholipid-binding copine ... 62 1e-10
Medtr2g063857.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 62 2e-10
Medtr6g092020.1 | calcium-dependent phospholipid-binding copine ... 61 2e-10
Medtr2g063907.1 | calcium-dependent phospholipid-binding copine ... 61 2e-10
Medtr6g092100.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 61 3e-10
Medtr2g063857.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 60 4e-10
Medtr8g447220.1 | calcium-dependent phospholipid-binding copine ... 60 5e-10
Medtr8g447220.2 | calcium-dependent phospholipid-binding copine ... 59 9e-10
Medtr3g075530.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 56 7e-09
Medtr3g075530.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 56 7e-09
Medtr8g089670.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 55 1e-08
Medtr6g021730.4 | E3 ubiquitin-protein ligase RGLG2-like protein... 55 1e-08
Medtr6g021730.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 55 1e-08
Medtr6g021730.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 55 1e-08
Medtr6g021730.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 55 1e-08
Medtr3g086520.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 54 2e-08
Medtr3g086520.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 54 2e-08
Medtr3g086520.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 54 2e-08
Medtr7g033100.3 | E3 ubiquitin-protein ligase RGLG2-like protein... 54 2e-08
Medtr7g033100.1 | E3 ubiquitin-protein ligase RGLG2-like protein... 54 2e-08
Medtr7g033100.2 | E3 ubiquitin-protein ligase RGLG2-like protein... 53 6e-08
Medtr7g081160.1 | copine protein, putative | LC | chr7:30949384-... 48 2e-06
Medtr2g063877.1 | copine protein | LC | chr2:27033437-27031622 |... 48 2e-06
>Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128294-44132918 | 20130731
Length = 455
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTSFAPVIDA ID VER+NGQYHVLVIIADGQV
Sbjct: 224 SGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQV 258
>Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128276-44132925 | 20130731
Length = 438
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTSFAPVIDA ID VER+NGQYHVLVIIADGQV
Sbjct: 207 SGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQV 241
>Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:44128294-44132918 | 20130731
Length = 437
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTSFAPVIDA ID VER+NGQYHVLVIIADGQV
Sbjct: 207 SGPTSFAPVIDAAIDIVERNNGQYHVLVIIADGQV 241
>Medtr2g063843.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr2:26998751-26994313 | 20130731
Length = 403
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 186 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 220
>Medtr2g063857.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr2:27010417-27015032 | 20130731
Length = 417
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 194 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 228
>Medtr6g092020.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr6:34700782-34696694 | 20130731
Length = 396
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 173 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 207
>Medtr2g063907.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr2:27061952-27065820 | 20130731
Length = 414
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 180 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 214
>Medtr6g092100.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:34717959-34721402 | 20130731
Length = 305
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 128 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 162
>Medtr2g063857.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr2:27010417-27014993 | 20130731
Length = 379
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A ID VE+S+GQ+HVLVIIADGQV
Sbjct: 194 SGPTSYAPVIEAAIDIVEKSHGQFHVLVIIADGQV 228
>Medtr8g447220.1 | calcium-dependent phospholipid-binding copine
family protein | HC | chr8:18538541-18545058 | 20130731
Length = 407
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
Query: 3 VSSLS-TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
V +LS +GPTS+APVI+A +D VE+++GQ+HVLVI+ADGQV
Sbjct: 173 VPNLSLSGPTSYAPVIEAAMDIVEKTHGQFHVLVIVADGQV 213
>Medtr8g447220.2 | calcium-dependent phospholipid-binding copine
family protein | HC | chr8:18538602-18544975 | 20130731
Length = 317
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 33/35 (94%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
+GPTS+APVI+A +D VE+++GQ+HVLVI+ADGQV
Sbjct: 179 SGPTSYAPVIEAAMDIVEKTHGQFHVLVIVADGQV 213
>Medtr3g075530.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:34395358-34390998 | 20130731
Length = 435
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ I VE+S GQYHVL+IIADGQV
Sbjct: 195 GPTSFAPIIEMAITIVEQSEGQYHVLLIIADGQV 228
>Medtr3g075530.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:34395116-34390998 | 20130731
Length = 435
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ I VE+S GQYHVL+IIADGQV
Sbjct: 195 GPTSFAPIIEMAITIVEQSEGQYHVLLIIADGQV 228
>Medtr8g089670.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr8:37321067-37317146 | 20130731
Length = 475
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ + VE+S GQYHVL+IIADGQV
Sbjct: 232 GPTSFAPIIEMGMTIVEKSGGQYHVLLIIADGQV 265
>Medtr6g021730.4 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471535-7476086 | 20130731
Length = 486
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+++ + VE+S GQYHVLVIIADGQV
Sbjct: 227 GPTSFAPIVETAMTIVEQSGGQYHVLVIIADGQV 260
>Medtr6g021730.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476055 | 20130731
Length = 486
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+++ + VE+S GQYHVLVIIADGQV
Sbjct: 227 GPTSFAPIVETAMTIVEQSGGQYHVLVIIADGQV 260
>Medtr6g021730.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476041 | 20130731
Length = 486
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+++ + VE+S GQYHVLVIIADGQV
Sbjct: 227 GPTSFAPIVETAMTIVEQSGGQYHVLVIIADGQV 260
>Medtr6g021730.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr6:7471024-7476055 | 20130731
Length = 486
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+++ + VE+S GQYHVLVIIADGQV
Sbjct: 227 GPTSFAPIVETAMTIVEQSGGQYHVLVIIADGQV 260
>Medtr3g086520.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204807-39200567 | 20130731
Length = 470
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ + VE+S GQYHVL+IIADGQV
Sbjct: 225 GPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQV 258
>Medtr3g086520.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204931-39200567 | 20130731
Length = 470
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ + VE+S GQYHVL+IIADGQV
Sbjct: 225 GPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQV 258
>Medtr3g086520.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr3:39204814-39200567 | 20130731
Length = 467
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSFAP+I+ + VE+S GQYHVL+IIADGQV
Sbjct: 222 GPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQV 255
>Medtr7g033100.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr7:11691860-11685758 | 20130731
Length = 445
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 28/34 (82%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSF P+++ + VE+S GQYHVLVIIADGQV
Sbjct: 207 GPTSFGPIVEMAMTIVEQSGGQYHVLVIIADGQV 240
>Medtr7g033100.1 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr7:11691746-11685758 | 20130731
Length = 445
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 28/34 (82%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSF P+++ + VE+S GQYHVLVIIADGQV
Sbjct: 207 GPTSFGPIVEMAMTIVEQSGGQYHVLVIIADGQV 240
>Medtr7g033100.2 | E3 ubiquitin-protein ligase RGLG2-like protein |
HC | chr7:11691746-11687428 | 20130731
Length = 404
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 28/34 (82%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQV 42
GPTSF P+++ + VE+S GQYHVLVIIADGQV
Sbjct: 207 GPTSFGPIVEMAMTIVEQSGGQYHVLVIIADGQV 240
>Medtr7g081160.1 | copine protein, putative | LC |
chr7:30949384-30956792 | 20130731
Length = 523
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 9 GPTSFAPVIDATIDTVERSNGQYHVLVIIADGQVI 43
G TSFAP+I+ V++S G++HVLVII+DGQVI
Sbjct: 114 GTTSFAPIIEMATKIVDQSGGKHHVLVIISDGQVI 148
>Medtr2g063877.1 | copine protein | LC | chr2:27033437-27031622 |
20130731
Length = 144
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 8 TGPTSFAPVIDATIDTVERSNGQYHVLVIIA-DGQVIP 44
+GPTS+APVI+A ID VE+S+GQ+HVLV + D ++ P
Sbjct: 47 SGPTSYAPVIEAAIDIVEKSHGQFHVLVTKSVDNELSP 84