Miyakogusa Predicted Gene

Lj0g3v0213389.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213389.2 tr|D7KV17|D7KV17_ARALL Calmodulin binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_,28.93,5e-18,
,CUFF.13725.2
         (262 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g085050.2 | calmodulin-binding; transcription regulators p...   290   1e-78
Medtr3g085050.1 | calmodulin-binding; transcription regulators p...   289   2e-78
Medtr8g080800.1 | calmodulin-binding; transcription regulators p...   208   5e-54

>Medtr3g085050.2 | calmodulin-binding; transcription regulators
           protein | HC | chr3:38424643-38433914 | 20130731
          Length = 917

 Score =  290 bits (741), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 157/266 (59%), Positives = 180/266 (67%), Gaps = 24/266 (9%)

Query: 2   VTGNIIM-----SHLDETDAKVLRQLEEQLSLNEDSFKEFSPLYSKDEFPHDLTPCQDQI 56
           VT +I++      H+++T+A+ LRQLEEQLSLN+DSF E  P YS+ E P          
Sbjct: 181 VTSDIVIMNNGTDHVEKTNAQALRQLEEQLSLNDDSFTEIPPFYSEHEIP---------- 230

Query: 57  LVYKEDISSAFSRPDDHKEHYDGYNGRQDDSRNDYHALLDHDCPDGHEKSLSWTEMLESC 116
                    AF+ PDDHK+ YDGYNG +D S N Y  LLDHD P GHEK+LSWTEMLES 
Sbjct: 231 --------VAFAEPDDHKQPYDGYNGTKDCSGNRYRELLDHDFPGGHEKTLSWTEMLESS 282

Query: 117 KPSSVIKLPEQHPYEAFENEKLLSSSRREIIANQESSHWLISNSNNAEKNFAFSFPQDIG 176
           K S V KLPEQH Y+ FENE  LSS  RE+IANQE+S+ +  NSNN E ++ F  PQD G
Sbjct: 283 KSSFVNKLPEQHAYKEFENETPLSSFGREMIANQETSYRIHPNSNNDENSW-FLLPQDTG 341

Query: 177 GVTSPLYSLEETQGTNSDYYTTFFDQIQIQEPLGTDSSLIVSEKQKFTIREVSPEYCYAT 236
           GV    YS  ETQGTNSDYY T FDQ QIQEP    SSL V +KQKFTI  VSPEYCYA 
Sbjct: 342 GVQFSPYSSIETQGTNSDYYETLFDQSQIQEPRDAYSSLTVGQKQKFTITAVSPEYCYAN 401

Query: 237 ETTKVIIIGSFLLPSSDSRWGCMFGD 262
           E TKVII+GSFL   SDS W CMFGD
Sbjct: 402 EATKVIIVGSFLCLPSDSTWACMFGD 427


>Medtr3g085050.1 | calmodulin-binding; transcription regulators
           protein | HC | chr3:38424643-38434678 | 20130731
          Length = 958

 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/266 (59%), Positives = 180/266 (67%), Gaps = 24/266 (9%)

Query: 2   VTGNIIM-----SHLDETDAKVLRQLEEQLSLNEDSFKEFSPLYSKDEFPHDLTPCQDQI 56
           VT +I++      H+++T+A+ LRQLEEQLSLN+DSF E  P YS+ E P          
Sbjct: 181 VTSDIVIMNNGTDHVEKTNAQALRQLEEQLSLNDDSFTEIPPFYSEHEIP---------- 230

Query: 57  LVYKEDISSAFSRPDDHKEHYDGYNGRQDDSRNDYHALLDHDCPDGHEKSLSWTEMLESC 116
                    AF+ PDDHK+ YDGYNG +D S N Y  LLDHD P GHEK+LSWTEMLES 
Sbjct: 231 --------VAFAEPDDHKQPYDGYNGTKDCSGNRYRELLDHDFPGGHEKTLSWTEMLESS 282

Query: 117 KPSSVIKLPEQHPYEAFENEKLLSSSRREIIANQESSHWLISNSNNAEKNFAFSFPQDIG 176
           K S V KLPEQH Y+ FENE  LSS  RE+IANQE+S+ +  NSNN E ++ F  PQD G
Sbjct: 283 KSSFVNKLPEQHAYKEFENETPLSSFGREMIANQETSYRIHPNSNNDENSW-FLLPQDTG 341

Query: 177 GVTSPLYSLEETQGTNSDYYTTFFDQIQIQEPLGTDSSLIVSEKQKFTIREVSPEYCYAT 236
           GV    YS  ETQGTNSDYY T FDQ QIQEP    SSL V +KQKFTI  VSPEYCYA 
Sbjct: 342 GVQFSPYSSIETQGTNSDYYETLFDQSQIQEPRDAYSSLTVGQKQKFTITAVSPEYCYAN 401

Query: 237 ETTKVIIIGSFLLPSSDSRWGCMFGD 262
           E TKVII+GSFL   SDS W CMFGD
Sbjct: 402 EATKVIIVGSFLCLPSDSTWACMFGD 427


>Medtr8g080800.1 | calmodulin-binding; transcription regulators
           protein | HC | chr8:34789253-34780716 | 20130731
          Length = 961

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 121/247 (48%), Positives = 150/247 (60%), Gaps = 18/247 (7%)

Query: 17  KVLRQLEEQLSLNEDSFKEFSPLYSKDEFPHDLTPCQDQILVYKEDISSAFSRPDDHKEH 76
           + LR+LE QLSLNED+ +E +P Y + E   D  P   Q ++ K++ S+A S P +    
Sbjct: 212 QALRRLEVQLSLNEDNIEEIAPFYDEHEAARDSKPQNHQGMMCKQEESAALSGPVNQGLF 271

Query: 77  YDGYNGRQDDSRNDYHALLDHDCPDGHEKSLSWTEMLESCKPSSVIKLPEQHPYEAFENE 136
           YDGYNGRQ DS   YH LLDHD PD +EK+LSW            + +P      A  NE
Sbjct: 272 YDGYNGRQGDSGESYHELLDHDFPDENEKTLSWKN----------VYMP------AAGNE 315

Query: 137 KLLSSSRREIIANQESSHWLISNSNNAEKNFAFSFPQDIGGVTSPLYS-LEETQGTNSDY 195
              SSS RE + N E+  W   N++NA  N  FS PQ +G VT P YS L+ETQ + S Y
Sbjct: 316 SSPSSSLREPVTNPENYCWTNFNTDNA-GNSVFSLPQGVGEVTLPPYSSLDETQESRSSY 374

Query: 196 YTTFFDQIQIQEPLGTDSSLIVSEKQKFTIREVSPEYCYATETTKVIIIGSFLLPSSDSR 255
           Y+T FDQ QI       SSL VS+KQKFTI+ VSPE+ Y++ETTKV IIGSFL   SDS 
Sbjct: 375 YSTLFDQSQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYSSETTKVFIIGSFLCHPSDSA 434

Query: 256 WGCMFGD 262
           W CM GD
Sbjct: 435 WACMLGD 441