Miyakogusa Predicted Gene

Lj0g3v0213209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213209.1 tr|B9GGT7|B9GGT7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_841270 PE=4
SV=1,44,6e-19,Prolamin_like,Prolamin-like domain,CUFF.13713.1
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g049180.1 | ECA1 gametogenesis related family | HC | chr3:...   143   8e-35
Medtr8g099500.1 | ECA1 gametogenesis related family | HC | chr8:...   136   8e-33
Medtr3g049320.1 | ECA1 gametogenesis related family | HC | chr3:...   110   8e-25
Medtr3g095330.1 | ECA1 gametogenesis related family | HC | chr3:...    91   5e-19

>Medtr3g049180.1 | ECA1 gametogenesis related family | HC |
           chr3:18346047-18346484 | 20130731
          Length = 145

 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 70/114 (61%), Positives = 86/114 (75%), Gaps = 5/114 (4%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPST--MSLAVRLKLNSG---NCWESL 129
           MAS  KI  LVA       L ++ S+VESR LS P++  MSL  RLK++     NCWESL
Sbjct: 1   MASSHKIFVLVALALVFIALNSSTSIVESRKLSNPNSNLMSLEARLKVSGDEPSNCWESL 60

Query: 130 MQLQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
            +LQACSGEII FF+NGETY+G GCC+AI+VIGHDCWPN+VASLGFT +ET++L
Sbjct: 61  FKLQACSGEIITFFLNGETYLGYGCCKAIRVIGHDCWPNVVASLGFTNEETDLL 114


>Medtr8g099500.1 | ECA1 gametogenesis related family | HC |
           chr8:42005540-42005115 | 20130731
          Length = 141

 Score =  136 bits (343), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/112 (62%), Positives = 84/112 (75%), Gaps = 5/112 (4%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPST-MSLAVRLKLNS--GNCWESLMQ 131
           MAS  K+  +VA V  A  LV +   VESR  S PS  MSL  RLK++    NCW+SL +
Sbjct: 1   MASSHKVFIIVALVIIA--LVPSTYTVESRQHSNPSNLMSLEARLKVSGEPSNCWQSLFK 58

Query: 132 LQACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           LQACSGEII FF+NGETY+GNGCC+AI+VIGHDCWPN+VASLGFT +E+ IL
Sbjct: 59  LQACSGEIITFFLNGETYLGNGCCKAIRVIGHDCWPNMVASLGFTNEESYIL 110


>Medtr3g049320.1 | ECA1 gametogenesis related family | HC |
           chr3:18357875-18358313 | 20130731
          Length = 128

 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 16/111 (14%)

Query: 75  MASPTKISFLVAFVTCATILVAAPSVVESRPLSKPST--MSLAVRLKLNSGNCWESLMQL 132
           MAS  KI  LVA       L ++ S+VESR LS P++  MSL  RLK             
Sbjct: 1   MASSHKIFVLVALALVFIALNSSTSIVESRKLSNPNSNLMSLEARLK------------- 47

Query: 133 QACSGEIIAFFMNGETYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
               GEI+ FF+NGETY+G GCC+AI+VIGHDCWPN+VASLGFT +ET++L
Sbjct: 48  -HVVGEIVTFFLNGETYLGYGCCKAIRVIGHDCWPNVVASLGFTNEETDVL 97


>Medtr3g095330.1 | ECA1 gametogenesis related family | HC |
           chr3:43558929-43559330 | 20130731
          Length = 133

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 67/96 (69%), Gaps = 7/96 (7%)

Query: 93  ILVAAPSVVESRPLSKPSTMSLAVRLKLNSGN-----CWESLMQLQACSGEIIAFFMNGE 147
           I+++  ++V +  LS  ST +LA RL+L  G+     CWE++++LQ C+G+I+ FF+NG+
Sbjct: 9   IIISLSTIVTATSLS--STKTLASRLELFDGSGPNNKCWETMLELQHCTGDIVTFFLNGQ 66

Query: 148 TYIGNGCCQAIKVIGHDCWPNIVASLGFTTQETNIL 183
           T++G+GCC A+  I  +CW N++ SLG T +E  IL
Sbjct: 67  THLGSGCCNALLTIAQECWGNLLTSLGLTVEEAEIL 102