Miyakogusa Predicted Gene
- Lj0g3v0213029.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0213029.1 Non Characterized Hit- tr|I3SNF0|I3SNF0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.92,0,RNA-BINDING PROTEIN RELATED,NULL; KH_1,K Homology domain,
type 1; K homology RNA-binding domain,K Ho,CUFF.13695.1
(279 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g075710.1 | RNA-binding KH domain protein | HC | chr5:3222... 491 e-139
Medtr5g075710.3 | RNA-binding KH domain protein | HC | chr5:3222... 442 e-124
Medtr5g075710.2 | RNA-binding KH domain protein | HC | chr5:3222... 432 e-121
Medtr7g074100.1 | RNA-binding KH domain protein | HC | chr7:2767... 376 e-104
Medtr8g006605.1 | RNA-binding KH domain protein | HC | chr8:7443... 362 e-100
Medtr8g006580.1 | RNA-binding KH domain protein | HC | chr8:7074... 362 e-100
Medtr8g005550.1 | RNA-binding KH domain protein | HC | chr8:2306... 362 e-100
Medtr3g062640.1 | RNA-binding KH domain protein | HC | chr3:2830... 361 e-100
Medtr8g005430.1 | RNA-binding KH domain protein | HC | chr8:8684... 355 3e-98
Medtr3g010220.1 | RNA-binding KH domain protein | HC | chr3:2351... 268 5e-72
Medtr2g005590.2 | RNA-binding KH domain protein | HC | chr2:2238... 244 6e-65
Medtr2g005590.3 | RNA-binding KH domain protein | HC | chr2:2237... 239 1e-63
Medtr2g005590.1 | RNA-binding KH domain protein | HC | chr2:2237... 239 1e-63
Medtr3g078050.1 | hypothetical protein | LC | chr3:35166985-3516... 127 1e-29
Medtr4g036415.1 | splicing factor-like protein | HC | chr4:13104... 105 6e-23
Medtr4g088135.1 | transmembrane protein, putative | LC | chr4:34... 103 1e-22
Medtr3g054280.1 | transmembrane protein, putative | LC | chr3:21... 103 1e-22
>Medtr5g075710.1 | RNA-binding KH domain protein | HC |
chr5:32222823-32219192 | 20130731
Length = 281
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/281 (84%), Positives = 263/281 (93%), Gaps = 2/281 (0%)
Query: 1 MSGLYN-QISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLN 59
MSGLYN QISSP TARA+SPNIN+RSNF+VDSQYL EL+ EYQKL PFMQVLPLCTRLLN
Sbjct: 1 MSGLYNNQISSPGTARANSPNINMRSNFDVDSQYLTELVAEYQKLGPFMQVLPLCTRLLN 60
Query: 60 QEILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHKGLNVDWQT 119
QEILR SGK+GL+QNQGFSDYDRVQFGS PSL+PSL+TT++FTGWNSLSH+GLNVDWQ
Sbjct: 61 QEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSLDTTSSFTGWNSLSHEGLNVDWQR 120
Query: 120 TPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIK 179
P++ NS IVK++LRLDIP D++P FNFVGRLLGPRGNSLKRVEATTGCRVFIRG+GSIK
Sbjct: 121 APAISNSHIVKKMLRLDIPHDNHPTFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIK 180
Query: 180 DPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYK 239
D DKEE+LRG+PG+EHLNEPLH+LIEAELPVNVVD+RLRQAQEIIE LLKPVDE+QD YK
Sbjct: 181 DFDKEELLRGRPGFEHLNEPLHILIEAELPVNVVDLRLRQAQEIIEELLKPVDESQDIYK 240
Query: 240 RQQLRELAMLNSNFREESPQLSGSLSPFTSNE-IKRAKTDQ 279
RQQLRELAMLNS+FREESPQLSGSLSPFTSNE IKRAKTDQ
Sbjct: 241 RQQLRELAMLNSSFREESPQLSGSLSPFTSNEMIKRAKTDQ 281
>Medtr5g075710.3 | RNA-binding KH domain protein | HC |
chr5:32222391-32219192 | 20130731
Length = 266
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/250 (84%), Positives = 234/250 (93%), Gaps = 1/250 (0%)
Query: 31 SQYLAELLEEYQKLRPFMQVLPLCTRLLNQEILRVSGKNGLIQNQGFSDYDRVQFGSHNP 90
SQYL EL+ EYQKL PFMQVLPLCTRLLNQEILR SGK+GL+QNQGFSDYDRVQFGS P
Sbjct: 17 SQYLTELVAEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKP 76
Query: 91 SLLPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGR 150
SL+PSL+TT++FTGWNSLSH+GLNVDWQ P++ NS IVK++LRLDIP D++P FNFVGR
Sbjct: 77 SLMPSLDTTSSFTGWNSLSHEGLNVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGR 136
Query: 151 LLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPV 210
LLGPRGNSLKRVEATTGCRVFIRG+GSIKD DKEE+LRG+PG+EHLNEPLH+LIEAELPV
Sbjct: 137 LLGPRGNSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPV 196
Query: 211 NVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSN 270
NVVD+RLRQAQEIIE LLKPVDE+QD YKRQQLRELAMLNS+FREESPQLSGSLSPFTSN
Sbjct: 197 NVVDLRLRQAQEIIEELLKPVDESQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSN 256
Query: 271 E-IKRAKTDQ 279
E IKRAKTDQ
Sbjct: 257 EMIKRAKTDQ 266
>Medtr5g075710.2 | RNA-binding KH domain protein | HC |
chr5:32222712-32219192 | 20130731
Length = 244
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/244 (84%), Positives = 229/244 (93%), Gaps = 1/244 (0%)
Query: 37 LLEEYQKLRPFMQVLPLCTRLLNQEILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSL 96
+L EYQKL PFMQVLPLCTRLLNQEILR SGK+GL+QNQGFSDYDRVQFGS PSL+PSL
Sbjct: 1 MLIEYQKLGPFMQVLPLCTRLLNQEILRASGKSGLMQNQGFSDYDRVQFGSTKPSLMPSL 60
Query: 97 ETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRG 156
+TT++FTGWNSLSH+GLNVDWQ P++ NS IVK++LRLDIP D++P FNFVGRLLGPRG
Sbjct: 61 DTTSSFTGWNSLSHEGLNVDWQRAPAISNSHIVKKMLRLDIPHDNHPTFNFVGRLLGPRG 120
Query: 157 NSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIR 216
NSLKRVEATTGCRVFIRG+GSIKD DKEE+LRG+PG+EHLNEPLH+LIEAELPVNVVD+R
Sbjct: 121 NSLKRVEATTGCRVFIRGKGSIKDFDKEELLRGRPGFEHLNEPLHILIEAELPVNVVDLR 180
Query: 217 LRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNE-IKRA 275
LRQAQEIIE LLKPVDE+QD YKRQQLRELAMLNS+FREESPQLSGSLSPFTSNE IKRA
Sbjct: 181 LRQAQEIIEELLKPVDESQDIYKRQQLRELAMLNSSFREESPQLSGSLSPFTSNEMIKRA 240
Query: 276 KTDQ 279
KTDQ
Sbjct: 241 KTDQ 244
>Medtr7g074100.1 | RNA-binding KH domain protein | HC |
chr7:27677743-27671597 | 20130731
Length = 281
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/285 (68%), Positives = 231/285 (81%), Gaps = 16/285 (5%)
Query: 1 MSGLYNQISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60
MSGLYNQ S ARA+SP I R + VDSQYL+ELL E+QKL PF+QVLP+C+RLLNQ
Sbjct: 1 MSGLYNQNFS--HARAASPQI--RPSSEVDSQYLSELLAEHQKLGPFLQVLPICSRLLNQ 56
Query: 61 EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTG---WNSLSHK------ 111
EILRVSG ++ NQGF D+DR+Q S +P +L + + TG WNSL +
Sbjct: 57 EILRVSG---MLSNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGMGAWNSLQQERLCGPP 113
Query: 112 GLNVDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVF 171
G+N+DWQ+ P+ P+S VKRILRL+IP D++PNFNFVGRLLGPRGNSLKRVEATTGCRV+
Sbjct: 114 GMNMDWQSAPASPSSFTVKRILRLEIPVDTFPNFNFVGRLLGPRGNSLKRVEATTGCRVY 173
Query: 172 IRGQGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPV 231
IRG+GSIKDP+KE+ LRG+PGYEHLNE LH+LIEA+LP NVVDIRLRQAQEIIE LLKPV
Sbjct: 174 IRGKGSIKDPEKEDKLRGRPGYEHLNENLHILIEADLPANVVDIRLRQAQEIIEELLKPV 233
Query: 232 DETQDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAK 276
DE+QDF KRQQLRELA+LNSNFREESP SGS+SPF S+ +KRAK
Sbjct: 234 DESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAK 278
>Medtr8g006605.1 | RNA-binding KH domain protein | HC |
chr8:744315-740918 | 20130731
Length = 276
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/283 (67%), Positives = 227/283 (80%), Gaps = 19/283 (6%)
Query: 2 SGLYN-QISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60
GLYN SSP RA+SP I S+ +DSQYL+ELL EYQKL PF+++LP +RLLNQ
Sbjct: 4 GGLYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQ 60
Query: 61 EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHK------GLN 114
EILRVSG ++ NQGF+D+DR++ S S +++N TGWN+L H+ G+
Sbjct: 61 EILRVSG---MLSNQGFADFDRLRHRSP------SPLSSSNLTGWNNLQHERLCGTPGMT 111
Query: 115 VDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 174
+DWQ P+ P+S VKRILRL+IP D+YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 112 MDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 171
Query: 175 QGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDET 234
+GSIKDPDKEE LRG+PGYEHLNEPLH+LIEA+LP NVVD+RLRQAQEIIE LLKPVDE+
Sbjct: 172 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDES 231
Query: 235 QDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAKT 277
+DF KRQQLRELA+LNSN REESP SGS+SPF S+ +KRAKT
Sbjct: 232 EDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr8g006580.1 | RNA-binding KH domain protein | HC |
chr8:707473-703207 | 20130731
Length = 276
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/283 (67%), Positives = 227/283 (80%), Gaps = 19/283 (6%)
Query: 2 SGLYN-QISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60
GLYN SSP RA+SP I S+ +DSQYL+ELL EYQKL PF+++LP +RLLNQ
Sbjct: 4 GGLYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQ 60
Query: 61 EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHK------GLN 114
EILRVSG ++ NQGF+D+DR++ S S +++N TGWN+L H+ G+
Sbjct: 61 EILRVSG---MLSNQGFADFDRLRHRSP------SPLSSSNLTGWNNLQHERLCGTPGMT 111
Query: 115 VDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 174
+DWQ P+ P+S VKRILRL+IP D+YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 112 MDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 171
Query: 175 QGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDET 234
+GSIKDPDKEE LRG+PGYEHLNEPLH+LIEA+LP NVVD+RLRQAQEIIE LLKPVDE+
Sbjct: 172 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDES 231
Query: 235 QDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAKT 277
+DF KRQQLRELA+LNSN REESP SGS+SPF S+ +KRAKT
Sbjct: 232 EDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr8g005550.1 | RNA-binding KH domain protein | HC |
chr8:230618-227384 | 20130731
Length = 276
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/283 (67%), Positives = 227/283 (80%), Gaps = 19/283 (6%)
Query: 2 SGLYN-QISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60
GLYN SSP RA+SP I S+ +DSQYL+ELL EYQKL PF+++LP +RLLNQ
Sbjct: 4 GGLYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQ 60
Query: 61 EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHK------GLN 114
EILRVSG ++ NQGF+D+DR++ S S +++N TGWN+L H+ G+
Sbjct: 61 EILRVSG---MLSNQGFADFDRLRHRSP------SPLSSSNLTGWNNLQHERLCGTPGMT 111
Query: 115 VDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 174
+DWQ P+ P+S VKRILRL+IP D+YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 112 MDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 171
Query: 175 QGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDET 234
+GSIKDPDKEE LRG+PGYEHLNEPLH+LIEA+LP NVVD+RLRQAQEIIE LLKPVDE+
Sbjct: 172 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDES 231
Query: 235 QDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAKT 277
+DF KRQQLRELA+LNSN REESP SGS+SPF S+ +KRAKT
Sbjct: 232 EDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 274
>Medtr3g062640.1 | RNA-binding KH domain protein | HC |
chr3:28307380-28305002 | 20130731
Length = 237
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/235 (74%), Positives = 202/235 (85%), Gaps = 9/235 (3%)
Query: 4 LYNQISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQEIL 63
+YNQISSP++ R +SPNIN+RSNF+ +SQYL ELL E+QKL PFMQVLPLC+RLLNQEIL
Sbjct: 1 MYNQISSPSSQRTNSPNINMRSNFDAESQYLMELLSEHQKLGPFMQVLPLCSRLLNQEIL 60
Query: 64 RVSGKNGLIQN-QGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSH------KGLNVD 116
RVSGKNGL+QN QGF+D+DR+QF N S + S + NFTGWNSLSH KGLN+D
Sbjct: 61 RVSGKNGLLQNHQGFNDFDRMQF--MNQSHMASSDLKPNFTGWNSLSHDMLAEVKGLNMD 118
Query: 117 WQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQG 176
WQT P VPNS IVK+ILRLDIP D YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG+G
Sbjct: 119 WQTAPVVPNSHIVKKILRLDIPKDGYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 178
Query: 177 SIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPV 231
SIKD DKEE+LRG+PGYEHL++ LH+LIEAELP N+VD+RLR AQEIIE LLKPV
Sbjct: 179 SIKDLDKEELLRGRPGYEHLSDELHILIEAELPANIVDVRLRHAQEIIEELLKPV 233
>Medtr8g005430.1 | RNA-binding KH domain protein | HC |
chr8:868473-864902 | 20130731
Length = 275
Score = 355 bits (910), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/283 (66%), Positives = 227/283 (80%), Gaps = 20/283 (7%)
Query: 2 SGLYN-QISSPATARASSPNINIRSNFNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQ 60
GLYN SSP RA+SP I S+ +DSQYL+ELL EYQKL PF+++LP +RLLNQ
Sbjct: 4 GGLYNPNFSSPV--RAASPQIRPNSDI-IDSQYLSELLAEYQKLGPFIKILPNSSRLLNQ 60
Query: 61 EILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHK------GLN 114
EILRVSG ++ NQGF+D+DR++ S S +++N TGWN+L H+ G+
Sbjct: 61 EILRVSG---MLSNQGFADFDRLRHRSP------SPLSSSNLTGWNNLQHERLCGTPGMT 111
Query: 115 VDWQTTPSVPNSPIVKRILRLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 174
+DWQ P+ P+S VKRILRL+IP D+YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG
Sbjct: 112 MDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 171
Query: 175 QGSIKDPDKEEVLRGKPGYEHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDET 234
+GSIKDPD+E+ LRG+PGYEHLNEPLH+LIEA+LP NVVD+RLRQAQEIIE LLKPVDE+
Sbjct: 172 KGSIKDPDQEK-LRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDES 230
Query: 235 QDFYKRQQLRELAMLNSNFREESPQLSGSLSPFTSNEIKRAKT 277
+DF KRQQLRELA+LNSN REESP SGS+SPF S+ +KRAKT
Sbjct: 231 EDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKT 273
>Medtr3g010220.1 | RNA-binding KH domain protein | HC |
chr3:2351169-2345557 | 20130731
Length = 293
Score = 268 bits (684), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 180/264 (68%), Gaps = 30/264 (11%)
Query: 32 QYLAELLEEYQKLRPFMQVLPLCTRLLNQEILRVS---------GKNGLIQNQGFSDYDR 82
QYL+ELL E QK+ PFM VLP C RLLNQEILRV+ G++GL +
Sbjct: 40 QYLSELLGERQKISPFMAVLPHCYRLLNQEILRVTTILGNASVLGQSGLEHGSPLAAGGM 99
Query: 83 VQFGSHNP--------SLLPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILR 134
G +P S +PSL ++ W LS +G + +VK+ +R
Sbjct: 100 FSKGGLDPNGWVSRFQSEMPSLIQSSPTPSW--LSPQGSSSGL----------LVKKTIR 147
Query: 135 LDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYE 194
+DIP DS+PNFNFVGRLLGPRGNSLKRVEA T CRV IRG+GSIKD +EE++RGKPGYE
Sbjct: 148 VDIPVDSFPNFNFVGRLLGPRGNSLKRVEANTECRVLIRGRGSIKDTAREEMMRGKPGYE 207
Query: 195 HLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFR 254
HLNEPLH+L+EAELP ++D RL QA+EI+E+LL+PV+E+ DFYK+QQLRELAM+N R
Sbjct: 208 HLNEPLHILVEAELPAEIIDARLMQAREILEDLLRPVEESHDFYKKQQLRELAMINGTLR 267
Query: 255 EESPQLSGSLSPF-TSNEIKRAKT 277
EE +SGS+SPF S +KRAKT
Sbjct: 268 EEGSPMSGSVSPFHNSLGMKRAKT 291
>Medtr2g005590.2 | RNA-binding KH domain protein | HC |
chr2:223815-220572 | 20130731
Length = 311
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/265 (53%), Positives = 171/265 (64%), Gaps = 16/265 (6%)
Query: 27 FNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQEILRVS-GKNGLIQNQGFSDYDRVQF 85
F+ +YLAELL E QKL PF+QVLP TRLL QEI R+S +G I D F
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 GSHNPSL---------LPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILRLD 136
P P E N S + V W +P +PIVKR++RLD
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSF--QASPVGWHGPQGIPTTPIVKRVIRLD 164
Query: 137 IPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYEHL 196
+P D YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ KPGYEHL
Sbjct: 165 VPVDKYPNYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEHL 224
Query: 197 NEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFREE 256
EPLH+L+EAE P ++++ RL A ++ENLLKPVDE+ D YK+QQLRELAM+N REE
Sbjct: 225 KEPLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLREE 284
Query: 257 ----SPQLSGSLSPFTSNEIKRAKT 277
SP +S S+SPF SN +KRAKT
Sbjct: 285 SPSMSPSMSPSMSPFNSNGMKRAKT 309
>Medtr2g005590.3 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/266 (53%), Positives = 171/266 (64%), Gaps = 17/266 (6%)
Query: 27 FNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQEILRVS-GKNGLIQNQGFSDYDRVQF 85
F+ +YLAELL E QKL PF+QVLP TRLL QEI R+S +G I D F
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 GSHNPSL---------LPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILRLD 136
P P E N S + V W +P +PIVKR++RLD
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSF--QASPVGWHGPQGIPTTPIVKRVIRLD 164
Query: 137 IPSDSYPN-FNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYEH 195
+P D YPN +NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ KPGYEH
Sbjct: 165 VPVDKYPNQYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEH 224
Query: 196 LNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFRE 255
L EPLH+L+EAE P ++++ RL A ++ENLLKPVDE+ D YK+QQLRELAM+N RE
Sbjct: 225 LKEPLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLRE 284
Query: 256 E----SPQLSGSLSPFTSNEIKRAKT 277
E SP +S S+SPF SN +KRAKT
Sbjct: 285 ESPSMSPSMSPSMSPFNSNGMKRAKT 310
>Medtr2g005590.1 | RNA-binding KH domain protein | HC |
chr2:223787-220586 | 20130731
Length = 312
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/266 (53%), Positives = 171/266 (64%), Gaps = 17/266 (6%)
Query: 27 FNVDSQYLAELLEEYQKLRPFMQVLPLCTRLLNQEILRVS-GKNGLIQNQGFSDYDRVQF 85
F+ +YLAELL E QKL PF+QVLP TRLL QEI R+S +G I D F
Sbjct: 47 FSDRERYLAELLAERQKLGPFLQVLPQSTRLLTQEIRRISSAGSGFIMEHDHPDSSTTPF 106
Query: 86 GSHNPSL---------LPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRILRLD 136
P P E N S + V W +P +PIVKR++RLD
Sbjct: 107 RPPLPQHPITRPMDFDWPHREDNGNIQRMGSF--QASPVGWHGPQGIPTTPIVKRVIRLD 164
Query: 137 IPSDSYPN-FNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGYEH 195
+P D YPN +NFVGR+LGPRGNSLKRVEA T CRV+IRG GS+KD KEE L+ KPGYEH
Sbjct: 165 VPVDKYPNQYNFVGRILGPRGNSLKRVEAMTECRVYIRGCGSVKDSIKEEKLKDKPGYEH 224
Query: 196 LNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNFRE 255
L EPLH+L+EAE P ++++ RL A ++ENLLKPVDE+ D YK+QQLRELAM+N RE
Sbjct: 225 LKEPLHLLVEAEFPEDIINSRLDHAVAVLENLLKPVDESLDHYKKQQLRELAMINGTLRE 284
Query: 256 E----SPQLSGSLSPFTSNEIKRAKT 277
E SP +S S+SPF SN +KRAKT
Sbjct: 285 ESPSMSPSMSPSMSPFNSNGMKRAKT 310
>Medtr3g078050.1 | hypothetical protein | LC |
chr3:35166985-35168852 | 20130731
Length = 234
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 10/105 (9%)
Query: 73 QNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLSHKGLNVDWQTTPSVPNSPIVKRI 132
+NQGFSDYDRVQFGS PSL+PSL+TT++FTGWNSLSH+GLNVDWQ P+V NS IVK++
Sbjct: 131 RNQGFSDYDRVQFGSVQPSLMPSLDTTSSFTGWNSLSHEGLNVDWQRAPTVSNSHIVKKM 190
Query: 133 LRLDIPSDSYPNFNFVGRLLGPRGNSL------KRVEATTGCRVF 171
LRLDIP D++P GR L N+L +R T G +F
Sbjct: 191 LRLDIPHDNHP----TGRYLKHYINALSIIRNHRRATQTCGISIF 231
>Medtr4g036415.1 | splicing factor-like protein | HC |
chr4:13104578-13109685 | 20130731
Length = 767
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 134 RLDIPSDSYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGQGSIKDPDKEEVLRGKPGY 193
+L IP YP +NF+G ++GPRGN+ KR+E TG ++ IRG+GS+K+ ++ KP
Sbjct: 217 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 276
Query: 194 EHLNEPLHVLIEAELPVNVVDIRLRQAQEIIENLLKPVDETQDFYKRQQLRELAMLNSNF 253
NE LHVL+EA+ D L A ++E LL+PVDE + +KRQQLRELA LN
Sbjct: 277 SE-NEDLHVLVEAD----TADA-LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI 330
Query: 254 REE 256
R+E
Sbjct: 331 RDE 333
>Medtr4g088135.1 | transmembrane protein, putative | LC |
chr4:34743214-34745096 | 20130731
Length = 279
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 58/166 (34%)
Query: 57 LLNQEILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLS------- 109
L +Q++++ ++ +NQGFSDYDRV FGS PSL+PSL+TT++FTGWNSLS
Sbjct: 118 LYDQQLMKSYEEH---RNQGFSDYDRVHFGSVQPSLMPSLDTTSSFTGWNSLSHERSYTM 174
Query: 110 --------------------------------------HKGLNVDWQTTPSVPNSPIVKR 131
H+GLNVDWQ P+V NS IVK+
Sbjct: 175 CYFYHVPIFPSITFSFFNLYFYLYPLTIKFAKRLSQILHQGLNVDWQRAPTVSNSHIVKK 234
Query: 132 ILRLDIPSDSYPNFNFVGRLLGPRGNSL------KRVEATTGCRVF 171
+LRLDIP D++P GR L N+L +R T G +F
Sbjct: 235 MLRLDIPHDNHP----TGRYLKHYINALSIIRNHRRATQTCGISIF 276
>Medtr3g054280.1 | transmembrane protein, putative | LC |
chr3:21531025-21532907 | 20130731
Length = 279
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 58/166 (34%)
Query: 57 LLNQEILRVSGKNGLIQNQGFSDYDRVQFGSHNPSLLPSLETTTNFTGWNSLS------- 109
L +Q++++ ++ +NQGFSDYDRV FGS PSL+PSL+TT++FTGWNSLS
Sbjct: 118 LYDQQLMKSYEEH---RNQGFSDYDRVHFGSVQPSLMPSLDTTSSFTGWNSLSHERSYTM 174
Query: 110 --------------------------------------HKGLNVDWQTTPSVPNSPIVKR 131
H+GLNVDWQ P+V NS IVK+
Sbjct: 175 CYFYHVPIFPSITFSFFNLYFYLYPLTIKFAKRLSQILHQGLNVDWQRAPTVSNSHIVKK 234
Query: 132 ILRLDIPSDSYPNFNFVGRLLGPRGNSL------KRVEATTGCRVF 171
+LRLDIP D++P GR L N+L +R T G +F
Sbjct: 235 MLRLDIPHDNHP----TGRYLKHYINALSIIRNHRRATQTCGISIF 276