Miyakogusa Predicted Gene

Lj0g3v0212869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0212869.1 Non Characterized Hit- tr|B9SB96|B9SB96_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,39.55,3e-19,FAMILY NOT NAMED,NULL; DUF599,Protein of unknown
function DUF599; seg,NULL,NODE_61825_length_576_cov_38.057293.path1.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g106520.1 | transmembrane protein, putative | HC | chr8:44...   186   8e-48
Medtr8g106530.1 | transmembrane protein, putative | HC | chr8:44...   122   1e-28
Medtr5g068640.1 | transmembrane protein, putative | HC | chr5:29...   116   6e-27
Medtr8g106520.2 | transmembrane protein, putative | HC | chr8:44...   110   4e-25
Medtr3g109280.1 | plant/F12B17-70 protein | HC | chr3:50521343-5...    74   4e-14
Medtr1g077210.1 | plant/F12B17-70 protein | HC | chr1:34457751-3...    71   3e-13
Medtr1g009030.1 | plant/F12B17-70 protein | HC | chr1:1151070-11...    71   4e-13
Medtr2g014820.1 | NB-ARC domain disease resistance protein | LC ...    63   9e-11
Medtr0054s0080.1 | plant/F12B17-70 protein | HC | scaffold0054:2...    62   2e-10
Medtr7g073370.1 | transmembrane protein, putative | HC | chr7:27...    55   2e-08

>Medtr8g106520.1 | transmembrane protein, putative | HC |
           chr8:44942443-44940421 | 20130731
          Length = 233

 Score =  186 bits (471), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 1/138 (0%)

Query: 1   MEVKYLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNG 60
           ME++ LD++          IYHVWLLYTIIR+PS TVIGLNAQSRYQW   +MSDP+KNG
Sbjct: 1   MEIEDLDYVLVPVGILVLLIYHVWLLYTIIRHPSSTVIGLNAQSRYQWTLFMMSDPMKNG 60

Query: 61  VLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKLIYGNKTSLNSSIKRLCISV 120
           VLAVQTIRNNIM                GVFASN+T E+KL++GNKTSLNSSIKRL IS+
Sbjct: 61  VLAVQTIRNNIMASTLLATTAITLSSLIGVFASNET-ETKLVFGNKTSLNSSIKRLFISL 119

Query: 121 CFLVAFLCNVQSIRYYAQ 138
           CFLVAFLCN+QSIRYYA 
Sbjct: 120 CFLVAFLCNMQSIRYYAH 137


>Medtr8g106530.1 | transmembrane protein, putative | HC |
           chr8:44946475-44943749 | 20130731
          Length = 508

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/135 (49%), Positives = 85/135 (62%), Gaps = 1/135 (0%)

Query: 4   KYLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNGVLA 63
           ++L+++          +YH WLL+TI+R P RTVIGLNA+SR QWV A+MSDP KNGVLA
Sbjct: 5   EHLEYVFVPLGLLVFFLYHAWLLFTILREPHRTVIGLNAESRIQWVHAMMSDPSKNGVLA 64

Query: 64  VQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKLIYGNKTSLNSSIKRLCISVCFL 123
           +QTIRNNIM                G+FAS+ +  S     +     SSIK + I++CFL
Sbjct: 65  IQTIRNNIMASTLLSTTAITLSSLIGIFASS-SWSSDDTSSSILQSTSSIKHISITICFL 123

Query: 124 VAFLCNVQSIRYYAQ 138
           VAFLCNVQSIR Y  
Sbjct: 124 VAFLCNVQSIRCYCH 138



 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 39  GLNAQSRYQWVFALMSDPLKNGVLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEE 98
           GL+  S+  ++  L  DP KNGVL VQTIRNNIM                G+FAS+    
Sbjct: 298 GLSDSSKTHFLLRL--DPFKNGVLGVQTIRNNIMASNLLATTAITLSSLIGIFASSSWSS 355

Query: 99  SKLIYGNKTSLNSSIKRLCISVCFLVAFLCNVQSIRYYAQ 138
                  +++  SSIKR+ I++CFLVAFLCNVQSIR Y  
Sbjct: 356 DDTSSILQST--SSIKRISITICFLVAFLCNVQSIRCYCH 393


>Medtr5g068640.1 | transmembrane protein, putative | HC |
           chr5:29072389-29070970 | 20130731
          Length = 254

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 83/141 (58%), Gaps = 3/141 (2%)

Query: 1   MEVKYLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNG 60
           M+ K LD I           YH+WLLY ++++P++TVIG+N+ +R  WV A+M D  KNG
Sbjct: 1   MDKKILDLILVPSGLFVMVAYHLWLLYQVVKHPTKTVIGVNSINRRYWVQAMMEDVSKNG 60

Query: 61  VLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEES---KLIYGNKTSLNSSIKRLC 117
           VLAVQ++RNNIM                 V  S+  E      L++G++T L  SIK   
Sbjct: 61  VLAVQSLRNNIMASTLLASTAIMLSSLIAVLMSSRNEGRSVVSLVFGDRTELVLSIKFFS 120

Query: 118 ISVCFLVAFLCNVQSIRYYAQ 138
           I VCF++AFL NVQSIRYY+ 
Sbjct: 121 ILVCFMLAFLLNVQSIRYYSH 141


>Medtr8g106520.2 | transmembrane protein, putative | HC |
           chr8:44943202-44940421 | 20130731
          Length = 177

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 1/82 (1%)

Query: 57  LKNGVLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKLIYGNKTSLNSSIKRL 116
           +KNGVLAVQTIRNNIM                GVFASN+TE +KL++GNKTSLNSSIKRL
Sbjct: 1   MKNGVLAVQTIRNNIMASTLLATTAITLSSLIGVFASNETE-TKLVFGNKTSLNSSIKRL 59

Query: 117 CISVCFLVAFLCNVQSIRYYAQ 138
            IS+CFLVAFLCN+QSIRYYA 
Sbjct: 60  FISLCFLVAFLCNMQSIRYYAH 81


>Medtr3g109280.1 | plant/F12B17-70 protein | HC |
           chr3:50521343-50526152 | 20130731
          Length = 230

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 63/144 (43%), Gaps = 6/144 (4%)

Query: 1   MEVK--YLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLK 58
           ME K  YLD I           YHVWL Y +  +P  T+I +NA  R  WV A+M D  K
Sbjct: 1   MEWKKCYLDVILVPLAILLSIGYHVWLWYNVRTHPHTTIIAINASGRRNWVAAMMKDNEK 60

Query: 59  NGVLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKL----IYGNKTSLNSSIK 114
             +LAVQT+RN IM                    S+     K     +YG       ++K
Sbjct: 61  KNILAVQTLRNTIMGATLMATTSILLCSGLAAIISSTYSVKKPLNDSVYGAHGEFMEALK 120

Query: 115 RLCISVCFLVAFLCNVQSIRYYAQ 138
            + +   FL +F C+  SIR+  Q
Sbjct: 121 YVTLLTIFLFSFFCHSLSIRFINQ 144


>Medtr1g077210.1 | plant/F12B17-70 protein | HC |
           chr1:34457751-34462026 | 20130731
          Length = 237

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 4/138 (2%)

Query: 5   YLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNGVLAV 64
           YLD +           YHVWL + +   PS T+IG+N   R  WV +++ D  K  +LAV
Sbjct: 7   YLDALLVPLGFMVIISYHVWLWHKVRTQPSSTIIGINTHGRRSWVPSMLKDIEKKNILAV 66

Query: 65  QTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKL----IYGNKTSLNSSIKRLCISV 120
           QT+RN IM                    S+     K     IYG  +    ++K + +  
Sbjct: 67  QTLRNLIMGSTLMATTSILLSAGLAAVISSTYSVKKPLNDSIYGAHSEFMVALKYVTLLT 126

Query: 121 CFLVAFLCNVQSIRYYAQ 138
            FL +F C+  SIR++ Q
Sbjct: 127 IFLFSFFCHTLSIRFFNQ 144


>Medtr1g009030.1 | plant/F12B17-70 protein | HC |
           chr1:1151070-1149419 | 20130731
          Length = 217

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 5   YLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNGVLAV 64
           YLD I           YHVWL + +   P  T++G+NA  R  WV A+M D  K  +LAV
Sbjct: 7   YLDVILVPLAMLISIGYHVWLWHKVRTQPHTTIVGINASGRRNWVNAMMKDNEKKNILAV 66

Query: 65  QTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESK----LIYGNKTSLNSSIKRLCISV 120
           Q++RN IM                    S+     K     IYG       ++K + +  
Sbjct: 67  QSLRNTIMGATLMATTSILLCSGLAAVISSTYSVKKPLNDAIYGAHGEFMVALKYVSLLT 126

Query: 121 CFLVAFLCNVQSIRYYAQ 138
            FL +F C+  SIR+  Q
Sbjct: 127 IFLFSFFCHSLSIRFINQ 144


>Medtr2g014820.1 | NB-ARC domain disease resistance protein | LC |
           chr2:4306971-4301435 | 20130731
          Length = 884

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 3/136 (2%)

Query: 6   LDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNGVLAVQ 65
           LD +           YH++LL+  I  P  TV+G     +  WV  +M    ++   A+ 
Sbjct: 651 LDLVLVPSGLLIMFAYHLFLLHRYINRPHTTVMGFENNDKRAWVDRIMQAEKRDISTALS 710

Query: 66  TIRNNIMXXXXXXXXXXXXXXXXGVFASNDTE---ESKLIYGNKTSLNSSIKRLCISVCF 122
            I+ N                  G + +N +    +S+LIYG+ ++   SIK +C+  CF
Sbjct: 711 VIQFNTSAATFLASISLTLCSLIGAWIANTSNILFQSQLIYGDTSATAVSIKYICLLTCF 770

Query: 123 LVAFLCNVQSIRYYAQ 138
           L+AF C +QS R++  
Sbjct: 771 LLAFSCFIQSARHFVH 786


>Medtr0054s0080.1 | plant/F12B17-70 protein | HC |
           scaffold0054:20336-22089 | 20130731
          Length = 232

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 6/144 (4%)

Query: 1   MEVK--YLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLK 58
           ME K  YLD +           YHVWL +     P  T IG+NA +R  WV  ++ D  K
Sbjct: 1   MEWKPYYLDMMLVPLGFVMTIGYHVWLWHKTRSEPFSTTIGINAHARRFWVPTMLKDIEK 60

Query: 59  NGVLAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESK----LIYGNKTSLNSSIK 114
             +L  Q++RN IM                    S+     K    ++YG       ++K
Sbjct: 61  KNILVAQSLRNLIMGSTLMATTSILLSAGLAAIISSTYSVKKPLDDVLYGAHGEFMEALK 120

Query: 115 RLCISVCFLVAFLCNVQSIRYYAQ 138
            + +   FL +F C+  SIR+  Q
Sbjct: 121 YVTLLTIFLFSFFCHTLSIRFLNQ 144


>Medtr7g073370.1 | transmembrane protein, putative | HC |
           chr7:27422638-27424221 | 20130731
          Length = 225

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 4/138 (2%)

Query: 2   EVKYLDFIXXXXXXXXXXIYHVWLLYTIIRYPSRTVIGLNAQSRYQWVFALMSDPLKNGV 61
           E  YLD I          +YH +L YTI   PSRT  G++   R  W   +     K  +
Sbjct: 3   EGIYLDTILVPLSLFITIVYHAFLCYTIKNKPSRTTYGIDKLRRTTWGLNVNQGDDKKAM 62

Query: 62  LAVQTIRNNIMXXXXXXXXXXXXXXXXGVFASNDTEESKL----IYGNKTSLNSSIKRLC 117
           L VQT+RN +M                    +N    S L     +G+K+     +K   
Sbjct: 63  LCVQTMRNTLMTTILTATITILVNMALAALNNNAFNASHLFSSGFFGSKSDTIFLLKYAS 122

Query: 118 ISVCFLVAFLCNVQSIRY 135
            S+C L++FLC+  +I +
Sbjct: 123 ASICLLISFLCSSMAIGF 140